View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12033_low_11 (Length: 397)
Name: NF12033_low_11
Description: NF12033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12033_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 18 - 378
Target Start/End: Original strand, 18693569 - 18693929
Alignment:
| Q |
18 |
aaaaccagagcaaaatatgaatccatggttataccagagcatatagagttgcatatcaaggacaaaagacagtgatagtaacaagtaatcatgaaggagt |
117 |
Q |
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| T |
18693569 |
aaaaccagagcaaaatatgaatccatggttataccagagcatatagagttgcatatcaaggacaaaagacagtgatagtaacaagtaatcatgaaggagt |
18693668 |
T |
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| Q |
118 |
tgcataaattttattcagcaaaagaaaacatataaataataatcatgaattttcatatcaaaagtattctttctattttaaactgatataacaacttcga |
217 |
Q |
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| T |
18693669 |
tgcataaattttattcagcaaaagaaaacatataaataataatcatgaattttcatatcaaaagtattctttctattttaaactgatataacaacttcga |
18693768 |
T |
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| Q |
218 |
ttcaactgaacaacacccccggatacattcttatgatacaacatacaacaaaatctttgcaaacttgtcacctgaatccatttcaacaaaatgctctatt |
317 |
Q |
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| T |
18693769 |
ttcaactgaacaacacccccggatacattcttatgatacaacatacaacaaaatctttgcaaacttgtcacctgaatccatttcaacaaaatgctctatt |
18693868 |
T |
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| Q |
318 |
cttgctccatctttccaatgcaaaacagattctggtcgttgcttccctttccaatacacag |
378 |
Q |
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| T |
18693869 |
cttgctccatctttccaatgcaaaacagattctggtcgttgcttccctttcaaatacacag |
18693929 |
T |
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