View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12033_low_17 (Length: 345)

Name: NF12033_low_17
Description: NF12033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12033_low_17
NF12033_low_17
[»] chr7 (71 HSPs)
chr7 (49-138)||(48539906-48539995)
chr7 (209-335)||(44141478-44141604)
chr7 (209-327)||(38816455-38816573)
chr7 (209-327)||(41320565-41320683)
chr7 (209-327)||(10336188-10336306)
chr7 (209-327)||(8952638-8952755)
chr7 (209-327)||(21766577-21766697)
chr7 (209-327)||(36508257-36508376)
chr7 (209-327)||(47404075-47404194)
chr7 (209-327)||(38567568-38567686)
chr7 (209-327)||(39384936-39385056)
chr7 (228-335)||(35193536-35193644)
chr7 (209-327)||(6626235-6626354)
chr7 (209-327)||(39997713-39997832)
chr7 (210-327)||(24164084-24164204)
chr7 (219-327)||(18732717-18732826)
chr7 (209-327)||(23999990-24000110)
chr7 (209-327)||(26174684-26174803)
chr7 (219-327)||(47913200-47913310)
chr7 (209-335)||(17356817-17356947)
chr7 (209-327)||(31657487-31657607)
chr7 (209-270)||(39102984-39103045)
chr7 (219-270)||(47403929-47403980)
chr7 (209-270)||(6607705-6607766)
chr7 (209-270)||(19276927-19276988)
chr7 (209-270)||(26174874-26174935)
chr7 (209-270)||(48863353-48863414)
chr7 (219-270)||(10336401-10336452)
chr7 (219-270)||(19276718-19276769)
chr7 (219-270)||(21766794-21766845)
chr7 (219-270)||(24164267-24164318)
chr7 (219-270)||(36508143-36508194)
chr7 (219-270)||(38567749-38567800)
chr7 (219-270)||(39102878-39102929)
chr7 (209-270)||(21438310-21438371)
chr7 (209-270)||(31849500-31849561)
chr7 (209-270)||(38816306-38816367)
chr7 (222-270)||(6626450-6626498)
chr7 (219-267)||(24000208-24000256)
chr7 (222-270)||(47913404-47913452)
chr7 (219-270)||(31657671-31657722)
chr7 (219-270)||(31849680-31849731)
chr7 (219-270)||(41320417-41320468)
chr7 (219-270)||(44141693-44141744)
chr7 (209-270)||(1795509-1795571)
chr7 (220-270)||(39997894-39997944)
chr7 (222-270)||(21276388-21276436)
chr7 (279-327)||(21276500-21276548)
chr7 (219-270)||(8952495-8952545)
chr7 (219-270)||(17356681-17356732)
chr7 (219-270)||(21438524-21438575)
chr7 (289-327)||(39384780-39384818)
chr7 (282-327)||(6607825-6607870)
chr7 (282-327)||(6626340-6626385)
chr7 (282-327)||(8952607-8952652)
chr7 (282-327)||(21766683-21766728)
chr7 (282-327)||(26174789-26174834)
chr7 (282-327)||(39384905-39384950)
chr7 (282-327)||(47404044-47404089)
chr7 (282-327)||(47913296-47913341)
chr7 (219-251)||(6626326-6626358)
chr7 (219-251)||(8952634-8952666)
chr7 (219-251)||(10336278-10336310)
chr7 (219-251)||(18732928-18732960)
chr7 (287-327)||(19276866-19276906)
chr7 (219-251)||(26174775-26174807)
chr7 (221-269)||(35193399-35193447)
chr7 (219-251)||(39384932-39384964)
chr7 (219-251)||(41320561-41320593)
chr7 (219-251)||(47404071-47404103)
chr7 (219-251)||(47913282-47913314)
[»] chr1 (105 HSPs)
chr1 (209-336)||(14291320-14291447)
chr1 (209-327)||(1366372-1366490)
chr1 (219-327)||(44519566-44519674)
chr1 (209-336)||(45951121-45951249)
chr1 (209-327)||(23253551-23253670)
chr1 (209-327)||(1342657-1342777)
chr1 (209-327)||(28486689-28486809)
chr1 (209-327)||(37351009-37351130)
chr1 (209-331)||(14556235-14556357)
chr1 (209-327)||(36466160-36466280)
chr1 (209-327)||(38717396-38717516)
chr1 (209-327)||(38872579-38872699)
chr1 (219-327)||(32005545-32005653)
chr1 (209-327)||(6782635-6782754)
chr1 (209-327)||(49628321-49628435)
chr1 (209-327)||(52346412-52346529)
chr1 (209-327)||(2730931-2731051)
chr1 (209-327)||(2937002-2937122)
chr1 (209-327)||(17077552-17077672)
chr1 (209-327)||(47648081-47648201)
chr1 (221-327)||(28838182-28838290)
chr1 (209-270)||(47672227-47672288)
chr1 (209-327)||(50755884-50756004)
chr1 (219-266)||(7838688-7838735)
chr1 (219-270)||(45950982-45951033)
chr1 (209-270)||(1342501-1342562)
chr1 (209-270)||(5132495-5132556)
chr1 (209-270)||(39759204-39759265)
chr1 (219-270)||(1366585-1366636)
chr1 (219-270)||(2730815-2730866)
chr1 (219-270)||(5132614-5132665)
chr1 (219-270)||(29548806-29548857)
chr1 (209-327)||(30057153-30057273)
chr1 (219-270)||(38717613-38717664)
chr1 (219-327)||(39759030-39759140)
chr1 (219-327)||(39764384-39764494)
chr1 (219-327)||(39950312-39950422)
chr1 (227-327)||(44396290-44396392)
chr1 (219-270)||(47647937-47647988)
chr1 (219-270)||(47672050-47672101)
chr1 (219-270)||(49628205-49628255)
chr1 (219-270)||(50755736-50755787)
chr1 (209-270)||(23253394-23253455)
chr1 (209-327)||(32487086-32487206)
chr1 (279-327)||(29548662-29548710)
chr1 (219-270)||(15875097-15875148)
chr1 (219-270)||(17077405-17077456)
chr1 (219-270)||(25378890-25378941)
chr1 (219-270)||(29715468-29715519)
chr1 (219-270)||(32486939-32486990)
chr1 (219-270)||(36466015-36466066)
chr1 (219-270)||(40124860-40124911)
chr1 (209-327)||(40125006-40125127)
chr1 (228-270)||(14556103-14556145)
chr1 (212-270)||(29715669-29715727)
chr1 (228-335)||(36302644-36302753)
chr1 (282-327)||(25378752-25378797)
chr1 (282-327)||(38019162-38019207)
chr1 (219-260)||(38019258-38019299)
chr1 (209-270)||(44519409-44519470)
chr1 (222-270)||(14291533-14291580)
chr1 (279-327)||(38019193-38019241)
chr1 (223-270)||(5904897-5904944)
chr1 (234-332)||(7838828-7838927)
chr1 (219-270)||(28838385-28838436)
chr1 (219-250)||(52346409-52346440)
chr1 (289-327)||(30056997-30057035)
chr1 (223-265)||(30057011-30057053)
chr1 (289-331)||(50755962-50756004)
chr1 (282-327)||(1342626-1342671)
chr1 (282-327)||(5905008-5905053)
chr1 (289-334)||(17077395-17077440)
chr1 (282-327)||(17077521-17077566)
chr1 (282-327)||(23253520-23253565)
chr1 (282-327)||(25378783-25378828)
chr1 (282-327)||(28486795-28486840)
chr1 (282-327)||(28838276-28838321)
chr1 (282-327)||(32487055-32487100)
chr1 (282-327)||(37351116-37351161)
chr1 (282-327)||(38717502-38717547)
chr1 (282-327)||(38872685-38872730)
chr1 (282-327)||(40124975-40125020)
chr1 (282-327)||(44519535-44519580)
chr1 (282-327)||(47648050-47648095)
chr1 (282-327)||(50755853-50755898)
chr1 (219-251)||(1342653-1342685)
chr1 (219-251)||(2931040-2931072)
chr1 (219-251)||(23253547-23253579)
chr1 (219-251)||(25378738-25378770)
chr1 (219-251)||(25378769-25378801)
chr1 (219-251)||(28486781-28486813)
chr1 (219-251)||(28838262-28838294)
chr1 (219-251)||(29548682-29548714)
chr1 (282-322)||(30057127-30057167)
chr1 (219-251)||(32487082-32487114)
chr1 (287-327)||(36466129-36466169)
chr1 (219-251)||(37351102-37351134)
chr1 (219-251)||(38291300-38291332)
chr1 (219-251)||(38717488-38717520)
chr1 (219-251)||(38872671-38872703)
chr1 (219-251)||(40125002-40125034)
chr1 (219-251)||(44519562-44519594)
chr1 (294-334)||(45950977-45951017)
chr1 (219-251)||(47648077-47648109)
chr1 (219-251)||(50755880-50755912)
[»] chr4 (109 HSPs)
chr4 (209-327)||(1614010-1614128)
chr4 (209-327)||(40005639-40005757)
chr4 (209-327)||(31317326-31317444)
chr4 (209-327)||(919402-919520)
chr4 (209-327)||(18436858-18436976)
chr4 (209-328)||(42208023-42208143)
chr4 (209-327)||(16335281-16335402)
chr4 (209-327)||(45311460-45311579)
chr4 (209-327)||(43979343-43979463)
chr4 (209-327)||(46008616-46008736)
chr4 (219-327)||(49264098-49264207)
chr4 (209-327)||(51716191-51716311)
chr4 (209-327)||(13199229-13199348)
chr4 (209-327)||(15169198-15169317)
chr4 (229-327)||(28693119-28693218)
chr4 (209-327)||(45226233-45226351)
chr4 (219-327)||(32328259-32328368)
chr4 (219-327)||(45311379-45311488)
chr4 (209-327)||(51892856-51892976)
chr4 (219-327)||(321727-321835)
chr4 (209-330)||(23205889-23206008)
chr4 (209-327)||(35377730-35377849)
chr4 (209-331)||(47690512-47690635)
chr4 (209-270)||(42598978-42599039)
chr4 (223-327)||(1922577-1922683)
chr4 (209-331)||(5813996-5814119)
chr4 (219-270)||(28693003-28693054)
chr4 (209-327)||(41965209-41965328)
chr4 (219-270)||(51892742-51892793)
chr4 (219-327)||(11021386-11021496)
chr4 (209-327)||(29526472-29526590)
chr4 (209-270)||(30560581-30560642)
chr4 (209-270)||(40147419-40147480)
chr4 (221-327)||(44589220-44589328)
chr4 (219-267)||(11021593-11021641)
chr4 (214-270)||(18437070-18437126)
chr4 (209-269)||(46008698-46008758)
chr4 (223-270)||(1614221-1614268)
chr4 (219-270)||(15169021-15169072)
chr4 (219-270)||(40005494-40005545)
chr4 (209-327)||(53940478-53940597)
chr4 (228-270)||(919265-919307)
chr4 (209-327)||(52096635-52096753)
chr4 (219-327)||(8444736-8444847)
chr4 (209-270)||(49263943-49264004)
chr4 (209-270)||(52096823-52096884)
chr4 (209-265)||(16335125-16335181)
chr4 (222-270)||(29526331-29526379)
chr4 (209-261)||(32384196-32384248)
chr4 (219-267)||(44589105-44589153)
chr4 (219-270)||(321930-321981)
chr4 (223-270)||(1922745-1922792)
chr4 (219-270)||(8444911-8444962)
chr4 (219-270)||(13199052-13199103)
chr4 (219-270)||(23205777-23205828)
chr4 (219-270)||(31317539-31317590)
chr4 (223-270)||(35377942-35377989)
chr4 (219-270)||(39210539-39210590)
chr4 (219-270)||(41965422-41965473)
chr4 (219-270)||(43561886-43561937)
chr4 (219-270)||(45848556-45848607)
chr4 (219-270)||(46008907-46008958)
chr4 (219-270)||(47690371-47690422)
chr4 (209-267)||(42495999-42496057)
chr4 (218-264)||(45226121-45226167)
chr4 (282-327)||(13199198-13199243)
chr4 (282-327)||(15169167-15169212)
chr4 (282-327)||(51716297-51716342)
chr4 (282-327)||(52096739-52096784)
chr4 (294-334)||(1614237-1614277)
chr4 (219-251)||(13199225-13199257)
chr4 (223-267)||(32328144-32328188)
chr4 (219-270)||(51716436-51716487)
chr4 (209-251)||(18436938-18436980)
chr4 (289-327)||(35377965-35378003)
chr4 (289-327)||(46008930-46008968)
chr4 (219-261)||(53940665-53940707)
chr4 (219-256)||(888146-888183)
chr4 (282-327)||(919371-919416)
chr4 (214-251)||(919398-919435)
chr4 (282-327)||(1614114-1614159)
chr4 (209-270)||(13086536-13086597)
chr4 (282-327)||(13199167-13199212)
chr4 (282-327)||(15169136-15169181)
chr4 (282-327)||(16335250-16335295)
chr4 (282-327)||(18436962-18437007)
chr4 (282-327)||(29526441-29526486)
chr4 (294-327)||(32328135-32328168)
chr4 (289-334)||(32384203-32384248)
chr4 (286-327)||(40005481-40005522)
chr4 (289-334)||(40147419-40147464)
chr4 (282-327)||(41965314-41965359)
chr4 (209-250)||(42207990-42208031)
chr4 (282-327)||(49264067-49264112)
chr4 (289-334)||(51892732-51892777)
chr4 (282-327)||(53940583-53940628)
chr4 (294-334)||(919251-919291)
chr4 (219-251)||(1614100-1614132)
chr4 (219-251)||(11021468-11021500)
chr4 (219-251)||(13199194-13199226)
chr4 (219-251)||(15169163-15169195)
chr4 (219-251)||(15169194-15169226)
chr4 (219-251)||(16335277-16335309)
chr4 (219-251)||(40005635-40005667)
chr4 (282-322)||(40147547-40147587)
chr4 (219-251)||(41965300-41965332)
chr4 (219-251)||(43979435-43979467)
chr4 (219-251)||(49264094-49264126)
chr4 (219-251)||(51716283-51716315)
[»] chr5 (87 HSPs)
chr5 (209-327)||(8144897-8145016)
chr5 (221-327)||(15440601-15440707)
chr5 (209-327)||(38790018-38790136)
chr5 (209-335)||(2268471-2268598)
chr5 (209-327)||(11062417-11062536)
chr5 (209-327)||(32792554-32792673)
chr5 (209-327)||(39412221-39412340)
chr5 (209-327)||(18674075-18674192)
chr5 (219-327)||(23592706-23592815)
chr5 (209-327)||(4620895-4621014)
chr5 (209-327)||(5214335-5214456)
chr5 (212-327)||(30491969-30492084)
chr5 (221-327)||(2033819-2033927)
chr5 (209-327)||(18705718-18705838)
chr5 (223-327)||(5907484-5907590)
chr5 (219-327)||(13198107-13198217)
chr5 (219-327)||(18036298-18036410)
chr5 (209-327)||(25945552-25945671)
chr5 (209-327)||(26408860-26408981)
chr5 (219-270)||(27858467-27858518)
chr5 (221-327)||(21747886-21747992)
chr5 (209-327)||(3578069-3578189)
chr5 (209-327)||(17964872-17964993)
chr5 (209-327)||(31912875-31912994)
chr5 (219-270)||(32792442-32792493)
chr5 (209-323)||(8343109-8343221)
chr5 (209-327)||(16968783-16968901)
chr5 (209-327)||(4717040-4717157)
chr5 (209-270)||(13197949-13198010)
chr5 (209-327)||(20166131-20166251)
chr5 (209-327)||(23910522-23910644)
chr5 (209-270)||(34929605-34929666)
chr5 (219-270)||(5214549-5214600)
chr5 (219-270)||(5907338-5907389)
chr5 (219-270)||(8144752-8144803)
chr5 (219-270)||(20166349-20166400)
chr5 (219-270)||(22619526-22619577)
chr5 (219-270)||(23592559-23592610)
chr5 (219-270)||(23910374-23910425)
chr5 (219-270)||(25945408-25945459)
chr5 (219-270)||(26408716-26408767)
chr5 (219-270)||(38790232-38790283)
chr5 (219-267)||(18036508-18036556)
chr5 (219-270)||(973906-973957)
chr5 (219-270)||(3023813-3023864)
chr5 (209-327)||(9177084-9177203)
chr5 (219-270)||(11062601-11062652)
chr5 (219-270)||(15442902-15442953)
chr5 (219-270)||(16968968-16969019)
chr5 (219-270)||(17964728-17964779)
chr5 (219-270)||(18705602-18705653)
chr5 (219-270)||(38244902-38244953)
chr5 (219-270)||(39412402-39412453)
chr5 (219-261)||(3578250-3578292)
chr5 (228-270)||(4716906-4716948)
chr5 (282-327)||(23910491-23910536)
chr5 (218-270)||(2034023-2034075)
chr5 (279-327)||(22619673-22619721)
chr5 (219-270)||(2268335-2268386)
chr5 (219-270)||(18673960-18674011)
chr5 (219-270)||(30492151-30492202)
chr5 (219-270)||(31912782-31912833)
chr5 (219-261)||(8343321-8343363)
chr5 (219-261)||(22619728-22619770)
chr5 (209-251)||(25945548-25945590)
chr5 (209-251)||(38245043-38245085)
chr5 (219-268)||(3023473-3023522)
chr5 (289-334)||(3578257-3578302)
chr5 (282-327)||(4620864-4620909)
chr5 (286-327)||(5950631-5950672)
chr5 (282-327)||(8144866-8144911)
chr5 (282-327)||(8343211-8343256)
chr5 (282-327)||(15440693-15440738)
chr5 (282-327)||(17964841-17964886)
chr5 (282-327)||(18036396-18036441)
chr5 (289-334)||(18674147-18674192)
chr5 (282-327)||(22619642-22619687)
chr5 (282-327)||(23592675-23592720)
chr5 (282-327)||(25945521-25945566)
chr5 (289-334)||(32792432-32792477)
chr5 (282-327)||(38245016-38245061)
chr5 (219-251)||(15440679-15440711)
chr5 (219-251)||(18036382-18036414)
chr5 (219-251)||(23592702-23592734)
chr5 (219-251)||(26408856-26408888)
chr5 (294-334)||(27858462-27858502)
chr5 (219-251)||(27858610-27858642)
[»] scaffold0651 (2 HSPs)
scaffold0651 (209-327)||(6254-6372)
scaffold0651 (209-270)||(6098-6159)
[»] chr3 (90 HSPs)
chr3 (209-327)||(40790877-40790995)
chr3 (209-322)||(21441037-21441151)
chr3 (209-327)||(11692224-11692344)
chr3 (209-314)||(44638482-44638587)
chr3 (209-327)||(49665519-49665639)
chr3 (219-327)||(51760993-51761102)
chr3 (209-327)||(47358380-47358500)
chr3 (209-327)||(38443510-38443629)
chr3 (219-324)||(54090064-54090172)
chr3 (209-327)||(55328509-55328626)
chr3 (209-335)||(21561015-21561143)
chr3 (219-327)||(29015797-29015907)
chr3 (209-327)||(33092104-33092225)
chr3 (221-327)||(34682505-34682614)
chr3 (209-327)||(54803103-54803222)
chr3 (222-327)||(16732000-16732106)
chr3 (220-327)||(51753975-51754084)
chr3 (223-327)||(27957687-27957792)
chr3 (219-270)||(54803287-54803338)
chr3 (209-327)||(16222543-16222665)
chr3 (219-270)||(11692441-11692492)
chr3 (219-270)||(27957539-27957590)
chr3 (219-270)||(29015978-29016029)
chr3 (219-270)||(34682360-34682411)
chr3 (219-270)||(38443396-38443447)
chr3 (209-327)||(40036715-40036831)
chr3 (219-270)||(47358229-47358280)
chr3 (219-270)||(51437077-51437128)
chr3 (221-327)||(51437193-51437300)
chr3 (219-270)||(51754180-51754231)
chr3 (219-269)||(21560877-21560927)
chr3 (223-327)||(47982557-47982658)
chr3 (223-327)||(47991844-47991945)
chr3 (223-327)||(48001131-48001232)
chr3 (221-270)||(3017453-3017502)
chr3 (223-327)||(26920661-26920765)
chr3 (282-327)||(26920751-26920796)
chr3 (282-331)||(44398018-44398067)
chr3 (219-267)||(44398162-44398210)
chr3 (222-270)||(55328722-55328770)
chr3 (219-327)||(19987914-19988026)
chr3 (219-270)||(35565120-35565171)
chr3 (219-270)||(35565261-35565312)
chr3 (219-270)||(40036927-40036978)
chr3 (219-270)||(40791090-40791141)
chr3 (219-270)||(47982441-47982492)
chr3 (219-270)||(47991728-47991779)
chr3 (219-270)||(48001015-48001066)
chr3 (219-270)||(48010302-48010353)
chr3 (219-269)||(26050567-26050617)
chr3 (289-327)||(29352474-29352512)
chr3 (223-265)||(48010477-48010519)
chr3 (287-327)||(35565249-35565289)
chr3 (222-270)||(40393542-40393589)
chr3 (219-270)||(21441220-21441271)
chr3 (219-270)||(26920862-26920913)
chr3 (223-270)||(29352488-29352535)
chr3 (219-270)||(49665408-49665459)
chr3 (219-270)||(51760869-51760920)
chr3 (219-270)||(52836679-52836730)
chr3 (228-270)||(16222760-16222802)
chr3 (209-251)||(23461010-23461052)
chr3 (209-251)||(31705272-31705314)
chr3 (209-251)||(44397994-44398036)
chr3 (282-327)||(11692330-11692375)
chr3 (214-251)||(16222632-16222669)
chr3 (282-327)||(16222651-16222696)
chr3 (282-327)||(16732092-16732137)
chr3 (282-327)||(23461034-23461079)
chr3 (209-254)||(29352621-29352666)
chr3 (282-327)||(31705296-31705341)
chr3 (282-327)||(34682474-34682519)
chr3 (282-327)||(40036817-40036862)
chr3 (282-327)||(40393657-40393702)
chr3 (282-327)||(40790981-40791026)
chr3 (289-334)||(44638482-44638527)
chr3 (282-327)||(47358349-47358394)
chr3 (222-251)||(51754059-51754088)
chr3 (282-327)||(51754070-51754115)
chr3 (282-327)||(51760962-51761007)
chr3 (289-334)||(54803303-54803348)
chr3 (282-327)||(55328612-55328657)
chr3 (219-251)||(3017331-3017363)
chr3 (219-251)||(11692316-11692348)
chr3 (219-251)||(16732078-16732110)
chr3 (287-327)||(27957656-27957696)
chr3 (238-270)||(31705405-31705437)
chr3 (219-251)||(34682501-34682533)
chr3 (279-327)||(48010418-48010466)
chr3 (219-270)||(54089919-54089971)
[»] scaffold0036 (3 HSPs)
scaffold0036 (209-327)||(16905-17024)
scaffold0036 (294-331)||(17138-17175)
scaffold0036 (219-251)||(16996-17028)
[»] chr2 (91 HSPs)
chr2 (209-331)||(33850675-33850798)
chr2 (219-331)||(970659-970772)
chr2 (209-327)||(18707747-18707867)
chr2 (209-327)||(32504049-32504169)
chr2 (219-327)||(4831195-4831305)
chr2 (209-327)||(14102641-14102762)
chr2 (209-327)||(32653883-32654004)
chr2 (209-327)||(32927937-32928058)
chr2 (221-327)||(45002968-45003075)
chr2 (209-327)||(4902822-4902942)
chr2 (223-327)||(2098375-2098481)
chr2 (219-327)||(3952137-3952248)
chr2 (219-327)||(11108632-11108741)
chr2 (209-327)||(18906993-18907113)
chr2 (209-327)||(39060475-39060592)
chr2 (219-327)||(14827577-14827685)
chr2 (219-327)||(41186328-41186435)
chr2 (212-321)||(11278067-11278176)
chr2 (209-327)||(42813945-42814065)
chr2 (220-327)||(5674218-5674326)
chr2 (218-270)||(32504264-32504316)
chr2 (219-270)||(2098577-2098628)
chr2 (219-270)||(14102857-14102908)
chr2 (219-270)||(18478576-18478627)
chr2 (219-270)||(18707603-18707654)
chr2 (219-270)||(25251527-25251578)
chr2 (219-270)||(28625748-28625799)
chr2 (219-270)||(32927760-32927811)
chr2 (219-270)||(34825967-34826018)
chr2 (219-270)||(42814239-42814290)
chr2 (209-327)||(9777195-9777316)
chr2 (209-327)||(430641-430762)
chr2 (219-327)||(3963247-3963356)
chr2 (221-327)||(7900340-7900450)
chr2 (221-270)||(18907207-18907256)
chr2 (209-270)||(25263630-25263691)
chr2 (219-267)||(970516-970564)
chr2 (219-267)||(33850532-33850580)
chr2 (223-270)||(430802-430849)
chr2 (219-270)||(4831401-4831452)
chr2 (219-270)||(4902701-4902752)
chr2 (219-270)||(4950099-4950150)
chr2 (219-270)||(8031302-8031353)
chr2 (219-270)||(11108486-11108537)
chr2 (219-270)||(11278247-11278298)
chr2 (219-270)||(14827779-14827830)
chr2 (223-270)||(25251725-25251772)
chr2 (219-270)||(32654100-32654151)
chr2 (223-270)||(40691567-40691614)
chr2 (219-270)||(41186528-41186579)
chr2 (219-270)||(42434756-42434807)
chr2 (221-327)||(8031153-8031261)
chr2 (282-327)||(18907099-18907144)
chr2 (282-327)||(32927906-32927951)
chr2 (209-327)||(34825751-34825873)
chr2 (219-267)||(3963132-3963180)
chr2 (279-327)||(28625605-28625653)
chr2 (289-327)||(2098361-2098399)
chr2 (282-324)||(3952109-3952151)
chr2 (209-251)||(4831267-4831309)
chr2 (289-327)||(34825990-34826028)
chr2 (209-270)||(42434931-42434993)
chr2 (294-327)||(430825-430858)
chr2 (282-327)||(2098467-2098512)
chr2 (282-327)||(4831291-4831336)
chr2 (282-327)||(4902791-4902836)
chr2 (282-327)||(4950189-4950234)
chr2 (282-327)||(7900436-7900481)
chr2 (282-327)||(14102748-14102793)
chr2 (209-250)||(18478445-18478486)
chr2 (282-327)||(18478469-18478514)
chr2 (282-327)||(18707716-18707761)
chr2 (282-327)||(25251642-25251687)
chr2 (282-327)||(25263547-25263592)
chr2 (282-327)||(32504155-32504200)
chr2 (282-327)||(32653990-32654035)
chr2 (282-327)||(32927875-32927920)
chr2 (282-327)||(34825859-34825904)
chr2 (219-251)||(2098453-2098485)
chr2 (222-270)||(3952001-3952049)
chr2 (219-251)||(3952133-3952165)
chr2 (219-251)||(4902818-4902850)
chr2 (219-251)||(5674214-5674246)
chr2 (219-251)||(14102734-14102766)
chr2 (219-251)||(18707743-18707775)
chr2 (287-327)||(28625644-28625684)
chr2 (219-251)||(32504141-32504173)
chr2 (219-251)||(32653976-32654008)
chr2 (219-251)||(32927902-32927934)
chr2 (219-251)||(32927933-32927965)
chr2 (287-327)||(42434871-42434911)
[»] chr8 (56 HSPs)
chr8 (209-327)||(7230038-7230156)
chr8 (219-327)||(10837391-10837502)
chr8 (209-327)||(17696824-17696944)
chr8 (209-327)||(30795002-30795122)
chr8 (209-327)||(32538999-32539119)
chr8 (209-327)||(9855531-9855650)
chr8 (209-335)||(43857668-43857799)
chr8 (219-327)||(2056947-2057057)
chr8 (209-327)||(37405941-37406061)
chr8 (219-327)||(7050548-7050661)
chr8 (228-327)||(42216343-42216443)
chr8 (209-327)||(10495916-10496034)
chr8 (219-327)||(7050633-7050746)
chr8 (209-320)||(2705231-2705343)
chr8 (222-270)||(42216539-42216587)
chr8 (219-270)||(2232782-2232833)
chr8 (219-270)||(41441464-41441515)
chr8 (209-267)||(34181223-34181281)
chr8 (209-270)||(27696950-27697011)
chr8 (209-270)||(32923792-32923853)
chr8 (219-270)||(4528897-4528948)
chr8 (219-270)||(7050808-7050859)
chr8 (219-270)||(7230251-7230302)
chr8 (209-327)||(7678343-7678462)
chr8 (219-270)||(10495801-10495852)
chr8 (219-270)||(10837244-10837295)
chr8 (219-270)||(26695689-26695740)
chr8 (223-270)||(37406155-37406202)
chr8 (223-270)||(42686273-42686320)
chr8 (209-327)||(26695477-26695594)
chr8 (228-327)||(4528729-4528832)
chr8 (282-327)||(26695580-26695625)
chr8 (219-251)||(42216415-42216447)
chr8 (219-270)||(7678524-7678575)
chr8 (223-270)||(27696779-27696826)
chr8 (209-251)||(7230118-7230160)
chr8 (228-270)||(9855395-9855437)
chr8 (289-331)||(10495791-10495833)
chr8 (289-327)||(26695712-26695750)
chr8 (289-327)||(37406178-37406216)
chr8 (282-327)||(7230142-7230187)
chr8 (282-327)||(9855500-9855545)
chr8 (282-327)||(10837360-10837405)
chr8 (282-327)||(32538968-32539013)
chr8 (282-327)||(34181331-34181376)
chr8 (282-327)||(37406047-37406092)
chr8 (282-327)||(42216429-42216474)
chr8 (282-330)||(2232895-2232943)
chr8 (219-251)||(9855527-9855559)
chr8 (219-251)||(10837387-10837419)
chr8 (294-334)||(10837467-10837507)
chr8 (295-327)||(27696771-27696803)
chr8 (219-251)||(30794998-30795030)
chr8 (222-270)||(32538856-32538904)
chr8 (279-327)||(32923919-32923967)
chr8 (279-327)||(34181297-34181345)
[»] scaffold0825 (2 HSPs)
scaffold0825 (219-327)||(1253-1363)
scaffold0825 (219-251)||(1335-1367)
[»] scaffold0079 (4 HSPs)
scaffold0079 (209-327)||(57458-57579)
scaffold0079 (209-265)||(57679-57735)
scaffold0079 (282-327)||(57565-57610)
scaffold0079 (219-251)||(57551-57583)
[»] chr6 (73 HSPs)
chr6 (209-327)||(605665-605784)
chr6 (209-327)||(16408807-16408926)
chr6 (209-327)||(33243395-33243515)
chr6 (223-327)||(21905028-21905134)
chr6 (219-327)||(21905106-21905216)
chr6 (209-327)||(32218912-32219033)
chr6 (209-327)||(17204088-17204206)
chr6 (219-327)||(12395888-12395997)
chr6 (209-335)||(21002837-21002964)
chr6 (209-327)||(33360675-33360794)
chr6 (209-327)||(583731-583851)
chr6 (209-327)||(6535478-6535598)
chr6 (209-327)||(9566268-9566388)
chr6 (209-327)||(22695810-22695930)
chr6 (219-270)||(16120480-16120531)
chr6 (209-270)||(5146887-5146947)
chr6 (209-270)||(10143496-10143557)
chr6 (218-270)||(12395741-12395793)
chr6 (209-323)||(5997421-5997536)
chr6 (209-327)||(6390138-6390257)
chr6 (219-270)||(9566075-9566126)
chr6 (219-270)||(14444885-14444936)
chr6 (219-270)||(33243248-33243299)
chr6 (219-270)||(33877962-33878013)
chr6 (209-327)||(2793259-2793376)
chr6 (209-270)||(583947-584008)
chr6 (209-270)||(14631014-14631075)
chr6 (209-270)||(21904934-21904995)
chr6 (282-327)||(22695779-22695824)
chr6 (219-270)||(6389991-6390042)
chr6 (219-270)||(6535662-6535713)
chr6 (219-270)||(10143289-10143340)
chr6 (219-270)||(16409024-16409075)
chr6 (219-270)||(17203944-17203995)
chr6 (219-270)||(21905342-21905393)
chr6 (219-270)||(33360526-33360577)
chr6 (282-327)||(14440585-14440630)
chr6 (282-327)||(33360644-33360689)
chr6 (209-270)||(33705870-33705931)
chr6 (282-330)||(583837-583885)
chr6 (287-327)||(14440559-14440599)
chr6 (219-270)||(32219128-32219180)
chr6 (219-270)||(605556-605607)
chr6 (223-270)||(2793117-2793164)
chr6 (219-270)||(3199357-3199408)
chr6 (219-270)||(5997272-5997323)
chr6 (223-270)||(22695638-22695685)
chr6 (219-270)||(33706084-33706135)
chr6 (289-327)||(2793103-2793141)
chr6 (289-331)||(5997262-5997304)
chr6 (209-251)||(12395884-12395926)
chr6 (209-251)||(14630883-14630925)
chr6 (289-327)||(22695624-22695662)
chr6 (289-327)||(32219152-32219190)
chr6 (289-327)||(33360516-33360554)
chr6 (282-327)||(2793228-2793273)
chr6 (282-327)||(9566237-9566282)
chr6 (282-327)||(14630907-14630952)
chr6 (289-334)||(16120470-16120515)
chr6 (282-327)||(16408912-16408957)
chr6 (282-327)||(21905202-21905247)
chr6 (282-327)||(32219019-32219064)
chr6 (282-327)||(33243364-33243409)
chr6 (282-327)||(33705976-33706021)
chr6 (219-251)||(583823-583855)
chr6 (219-251)||(9566264-9566296)
chr6 (279-327)||(10143435-10143483)
chr6 (219-251)||(21905188-21905220)
chr6 (219-251)||(32219005-32219037)
chr6 (219-251)||(33243391-33243423)
chr6 (219-251)||(33360640-33360672)
chr6 (219-251)||(33360671-33360703)
chr6 (219-251)||(33705962-33705994)
[»] scaffold0302 (3 HSPs)
scaffold0302 (219-327)||(14350-14459)
scaffold0302 (219-270)||(14204-14255)
scaffold0302 (282-327)||(14319-14364)
[»] scaffold0385 (1 HSPs)
scaffold0385 (209-327)||(13036-13155)
[»] scaffold0044 (5 HSPs)
scaffold0044 (209-327)||(9760-9880)
scaffold0044 (219-270)||(9636-9687)
scaffold0044 (289-331)||(9626-9668)
scaffold0044 (282-327)||(9729-9774)
scaffold0044 (219-251)||(9756-9788)
[»] scaffold0015 (3 HSPs)
scaffold0015 (228-331)||(49937-50041)
scaffold0015 (219-270)||(49795-49846)
scaffold0015 (282-330)||(49907-49955)
[»] scaffold0275 (2 HSPs)
scaffold0275 (209-327)||(1335-1453)
scaffold0275 (209-270)||(1519-1580)
[»] scaffold0009 (2 HSPs)
scaffold0009 (209-327)||(58516-58635)
scaffold0009 (219-270)||(58702-58753)
[»] scaffold0170 (2 HSPs)
scaffold0170 (209-327)||(5578-5702)
scaffold0170 (219-270)||(5767-5818)
[»] scaffold0045 (2 HSPs)
scaffold0045 (209-327)||(35404-35524)
scaffold0045 (219-261)||(35631-35673)
[»] scaffold0838 (1 HSPs)
scaffold0838 (209-270)||(5337-5398)
[»] scaffold0832 (1 HSPs)
scaffold0832 (209-270)||(5368-5429)
[»] scaffold0185 (3 HSPs)
scaffold0185 (279-327)||(8259-8307)
scaffold0185 (223-270)||(8146-8193)
scaffold0185 (289-327)||(8132-8170)
[»] scaffold0421 (2 HSPs)
scaffold0421 (223-270)||(3032-3079)
scaffold0421 (289-327)||(3018-3056)
[»] scaffold0229 (1 HSPs)
scaffold0229 (219-256)||(24333-24370)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 48539906 - 48539995
Alignment:
Q  49 gtttagtgttggaagtgaacccacagcgctgccacggaagtagaggagatagggtgggcgacacactttttctttcaactttgatgagtc 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48539906 gtttagtgttggaagtgaacccacagcgctgccacggaagtagaggagaaagggtgggcgacacactttttctttcaactttgatgagtc 48539995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 44141478 - 44141604
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||        ||||||| |||||||||| |||| ||||||    
T  44141478 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctattaactttctgttaaaaaaaacacaaaactattggtattagtccctgcact 44141577  T
Q  309 ttgtaagaatattggtattagtctctg 335  Q
    |||||| ||||||||||||||||||||    
T  44141578 ttgtaaaaatattggtattagtctctg 44141604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 38816573 - 38816455
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||        ||||||| ||||||||||||||| ||||||    
T  38816573 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 38816474  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  38816473 ttgtaaaaatattggtatt 38816455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 41320683 - 41320565
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||| ||||        ||||||| ||||||||||||||| ||||||    
T  41320683 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttttgttaaaaaaaacacaaaactattggtattggtccctgcact 41320584  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  41320583 ttgtaaaaatattggtatt 41320565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 10336188 - 10336306
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||| | |||||||||||||||||||| ||| ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  10336188 ttggaattggtccctgtactttgtaaaaatattggtattcgtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 10336287  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  10336288 ttgtaaaaatattggtatt 10336306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 8952755 - 8952638
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||| || |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  8952755 ttggaattggtccctacactttgtaaaaatattggtattggtccctctattaactttctgtt-aaaaaaacacaaaactattggtattggtccctgcact 8952657  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  8952656 ttgtaaaaatattggtatt 8952638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 21766577 - 21766697
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||          ||||||| ||||||||||||||||||||    
T  21766577 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaataaaaaaacacaaaactattggtattggtccttgca 21766676  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  21766677 ctttgtaaaaatattggtatt 21766697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 36508376 - 36508257
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  36508376 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 36508277  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  36508276 tttgtaaaaatattgatatt 36508257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 47404194 - 47404075
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||| ||||         ||||||| ||||||||||||||| |||||    
T  47404194 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttgtgttaaaaaaaaacacaaaactattggtattggtccctgcac 47404095  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  47404094 tttgtaaaaatattggtatt 47404075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 38567568 - 38567686
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    |||||||| |||| || | |||||||||||||||||||||||  ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  38567568 ttggaattgatccatgtactttgtaaaaatattggtattggttcctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 38567667  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||| ||||    
T  38567668 ttgtaaaaatattgatatt 38567686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 39385056 - 39384936
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||| ||||||||||| ||||    
T  39385056 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactatcggtattggtccctgca 39384957  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  39384956 ctttgtaaaaatattggtatt 39384936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 35193644 - 35193536
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcactttgtaagaatattggtat 326  Q
    |||||||||||||||||||||||| ||||||||||||||| ||         ||||||| |||||| |||||||| |||||||||||| |||||||||||    
T  35193644 tttgtaaaaatattggtattggtccctctattaactttctattaaaaaaaaacacaaaactattggcattggtccctgcactttgtaaaaatattggtat 35193545  T
Q  327 tagtctctg 335  Q
    |||||||||    
T  35193544 tagtctctg 35193536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 6626235 - 6626354
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| ||||| |||||||         ||||||| ||||||||||||||| |||||    
T  6626235 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaaccttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 6626334  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  6626335 tttgtaaaaatattggtatt 6626354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 39997713 - 39997832
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  39997713 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 39997812  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  39997813 tttgtaaaaatattgatatt 39997832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 327
Target Start/End: Original strand, 24164084 - 24164204
Alignment:
Q  210 tggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||||||||| ||||||||| ||||    
T  24164084 tggaattggtccctgcactttgtaaaaatattggtattggtcactctattaactttctgttaaaaaaaaaaacacaaaattattgatattggtccctgca 24164183  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  24164184 ctttgtaaaaatattgatatt 24164204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 18732717 - 18732826
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||         ||||||| ||||||||||||||| |||||||||||| ||    
T  18732717 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaa 18732816  T
Q  318 tattggtatt 327  Q
    ||||| ||||    
T  18732817 tattgatatt 18732826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 23999990 - 24000110
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn--cacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||| ||| ||||||||||||||||||||| || ||||||||||||||| ||          ||||||||||||||||||||||| ||||    
T  23999990 ttggaattggtcccggcactttgtaaaaatattggtattgatccctctattaactttctattaaaaaaaaaacacaaaattattggtattggtccctgca 24000089  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  24000090 ctttgtaaaaatattggtatt 24000110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 26174684 - 26174803
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||  |||||||||||||         ||||||| |||| |||||||||| |||||    
T  26174684 ttggaattggtccctgcactttgtaaaaatattggtattggtcactcagttaactttctgttaaaaaaaaacacaaaactatttgtattggtccctgcac 26174783  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  26174784 tttgtaaaaatattggtatt 26174803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 47913200 - 47913310
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||          ||||||| |||||||||| |||| |||||||||||| |    
T  47913200 tccctgcactttgtaaaaatattggtattggtccttctattaactttctgttaaaaaaaaaacacaaaactattggtatttgtccctgcactttgtaaaa 47913299  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  47913300 atattggtatt 47913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 335
Target Start/End: Complemental strand, 17356947 - 17356817
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnnca----caaaattattggtattggtccttg 304  Q
    ||||||||| |||||||| ||||||||||||||||||||| || |||| ||||| |||||||         |    ||||| ||||||||||||||| ||    
T  17356947 ttggaattagtccctgcactttgtaaaaatattggtattgatccctctgttaaccttctgttaaaaaaaaaaaatacaaaactattggtattggtccctg 17356848  T
Q  305 cactttgtaagaatattggtattagtctctg 335  Q
    |||||||||| |||||||||||| |||||||    
T  17356847 cactttgtaaaaatattggtattggtctctg 17356817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 31657487 - 31657607
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||| ||||||||| ||||||||||||||||||||| || |||| ||||| |||||||          ||||||| ||||||||||||||| ||||    
T  31657487 ttggaattgatccctgcactttgtaaaaatattggtattgatccctctgttaaccttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 31657586  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  31657587 ctttgtaaaaatattgatatt 31657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 39103045 - 39102984
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  39103045 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtt 39102984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47403929 - 47403980
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  47403929 tccctgcattttgtaaaaatattggtattggtccctctgttaactttctgtt 47403980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 6607705 - 6607766
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  6607705 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 6607766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 19276988 - 19276927
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  19276988 ttggaattggtccctgcactttgtaaaaatattgatattggtccctctattaactttctgtt 19276927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 26174935 - 26174874
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  26174935 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 26174874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 48863353 - 48863414
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||| |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  48863353 ttggaattgatccatgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 48863414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 10336452 - 10336401
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  10336452 tccctgcactttgtaaaaatattggtattgatctctctgttaactttctgtt 10336401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 19276718 - 19276769
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  19276718 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 19276769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 21766845 - 21766794
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  21766845 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 21766794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 24164318 - 24164267
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  24164318 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 24164267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 36508143 - 36508194
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  36508143 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 36508194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 38567800 - 38567749
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  38567800 tccctgcattttgtaaaaatattggtattagtccctctgttaactttctgtt 38567749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 39102878 - 39102929
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  39102878 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 39102929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 21438310 - 21438371
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| ||||||||||||||| |||||||| |||| |||||||||||||    
T  21438310 ttggaattggtccctgcactttgtaaaaatattgatattggtccctctgttaactttctgtt 21438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 31849500 - 31849561
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||| ||| |||| |||||||||||||    
T  31849500 ttggaattggtccctgcactttgtaaaaatattggtattcgtccctctgttaactttctgtt 31849561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 38816306 - 38816367
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||| |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  38816306 ttggcattagtccctgcactttgtaaaaatattggtattggtccatctgttaactttctgtt 38816367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 6626498 - 6626450
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  6626498 ctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 6626450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 24000256 - 24000208
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  24000256 tccctgcactttgtaaaaatattggtattggtccctctgttaactttct 24000208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 47913452 - 47913404
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  47913452 ctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 47913404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 31657722 - 31657671
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  31657722 tccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 31657671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 31849731 - 31849680
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  31849731 tccctgtactttgtaaaaatattggtattggtccctctgttaactttctgtt 31849680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 41320417 - 41320468
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  41320417 tccctgcactttgtaaaaatattggtattggtccctctgttaattttctgtt 41320468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 44141744 - 44141693
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  44141744 tccctgtactttgtaaaaatattggtattggtccctctgttaactttctgtt 44141693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 1795509 - 1795571
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctatt-aactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| || |||||||||||    
T  1795509 ttggcattgatccctgcactttgtaaaaatattggtattggtcactctgttaaactttctgtt 1795571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 39997944 - 39997894
Alignment:
Q  220 ccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  39997944 ccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 39997894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 21276388 - 21276436
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  21276388 ctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 21276436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 21276548 - 21276500
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  21276548 cacaaaactattggtattggtccctgcactttgtaaaaatattgatatt 21276500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 8952495 - 8952545
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||| |||||||||||||| |||| |||||||||||||    
T  8952495 tccctgcactttgtaaaa-tattggtattggtccctctgttaactttctgtt 8952545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 17356681 - 17356732
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  17356681 tccctgcactttgtaaaaatattggtattggtccttctgctaactttctgtt 17356732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 21438575 - 21438524
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | ||||||||||||||||||||||||  ||| |||||||||||||    
T  21438575 tccctgtactttgtaaaaatattggtattggtccttctgttaactttctgtt 21438524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 39384780 - 39384818
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  39384780 ttggcattggtccttgcactttgtaaaaatattggtatt 39384818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 6607870 - 6607825
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  6607870 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 6607825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 6626340 - 6626385
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  6626340 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 6626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 8952652 - 8952607
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  8952652 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 8952607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 21766683 - 21766728
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  21766683 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 21766728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 26174789 - 26174834
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  26174789 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 26174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 39384950 - 39384905
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  39384950 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 39384905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 47404089 - 47404044
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  47404089 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 47404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 47913296 - 47913341
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  47913296 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 47913341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 6626326 - 6626358
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  6626326 tccctgcactttgtaaaaatattggtattggtc 6626358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 8952666 - 8952634
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  8952666 tccctgcactttgtaaaaatattggtattggtc 8952634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 10336278 - 10336310
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  10336278 tccctgcactttgtaaaaatattggtattggtc 10336310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 18732960 - 18732928
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  18732960 tccctgcactttgtaaaaatattggtattggtc 18732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 19276906 - 19276866
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||| |||||||| ||| ||||||||||||    
T  19276906 tattggtattggtccctgcactttataaaaatattggtatt 19276866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 26174775 - 26174807
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  26174775 tccctgcactttgtaaaaatattggtattggtc 26174807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 35193399 - 35193447
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgt 269  Q
    |||||| |||||||||||||| ||||||||| |||| |||| |||||||    
T  35193399 cctgcactttgtaaaaatattagtattggtccctctgttaattttctgt 35193447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 39384964 - 39384932
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  39384964 tccctgcactttgtaaaaatattggtattggtc 39384932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 41320593 - 41320561
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  41320593 tccctgcactttgtaaaaatattggtattggtc 41320561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 47404103 - 47404071
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  47404103 tccctgcactttgtaaaaatattggtattggtc 47404071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 47913282 - 47913314
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  47913282 tccctgcactttgtaaaaatattggtattggtc 47913314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 105)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 209 - 336
Target Start/End: Original strand, 14291320 - 14291447
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||| ||||||||| ||||||    
T  14291320 ttggaattgatccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattgatattggtccctgcact 14291419  T
Q  309 ttgtaagaatattggtattagtctctgt 336  Q
    |||||| |||||||||||| ||| ||||    
T  14291420 ttgtaaaaatattggtattggtccctgt 14291447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 1366372 - 1366490
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  1366372 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 1366471  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  1366472 ttgtaaaaatattggtatt 1366490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 44519674 - 44519566
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| |||||||||||| |||    
T  44519674 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaat 44519575  T
Q  319 attggtatt 327  Q
    |||||||||    
T  44519574 attggtatt 44519566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 45951249 - 45951121
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  45951249 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 45951150  T
Q  308 tttgtaagaatattggtattagtctctgt 336  Q
    ||||||| ||||||| |||||||| ||||    
T  45951149 tttgtaaaaatattgatattagtccctgt 45951121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 23253670 - 23253551
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||| ||         ||||||||||||||||||||||| |||||    
T  23253670 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctattaaaaaaaaacacaaaattattggtattggtccctgcac 23253571  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  23253570 tttgtaaaaatattggtatt 23253551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 1342777 - 1342657
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  1342777 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 1342678  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  1342677 ctttgtaaaaatattggtatt 1342657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 28486689 - 28486809
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  28486689 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 28486788  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  28486789 ctttgtaaaaatattggtatt 28486809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 37351009 - 37351130
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||||||           ||||||| ||||||||||||||| |||    
T  37351009 ttggaattggtccctgcactttgtaaaaatattggtattggtttctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccctgc 37351108  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  37351109 actttgtaaaaatattggtatt 37351130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 14556357 - 14556235
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    |||||||| ||||||||| ||||||||||||||||||||| || |||| |||||||||||||        ||| ||| |||||||||| |||| || |||    
T  14556357 ttggaattgatccctgcactttgtaaaaatattggtattgatccctctgttaactttctgttaaaaaaaacaccaaactattggtattagtccctgtact 14556258  T
Q  309 ttgtaagaatattggtattagtc 331  Q
    |||||| ||||||||||||||||    
T  14556257 ttgtaaaaatattggtattagtc 14556235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 36466280 - 36466160
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  36466280 ttggaattgatccctgtactttgtaaaaatattggtattggtccctctattaactttctgttaaaaataaaacacaaaactattggtattggtccctgca 36466181  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||  ||||||||||||    
T  36466180 ctttgtagaaatattggtatt 36466160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 38717396 - 38717516
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||  ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  38717396 ttggaattggtccctgcactttgtaaaaatattggtattggttcctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 38717495  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  38717496 ctttgtaaaaatattggtatt 38717516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 38872579 - 38872699
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||| ||||| ||||    
T  38872579 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtatcggtccctgca 38872678  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  38872679 ctttgtaaaaatattggtatt 38872699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 32005545 - 32005653
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||||| ||||||||||||||| |||| ||| ||||||||||||||||||        ||||||| ||||||||||||||| |||||||||||| |||    
T  32005545 tccctgcactttgtaaaaatattgatattagtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaat 32005644  T
Q  319 attggtatt 327  Q
    |||| ||||    
T  32005645 attgatatt 32005653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 6782635 - 6782754
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||         ||||||| |||| |||||||| | |||||    
T  6782635 ttggaattgatccctgcactttgtaaaaatattggtattggtccctctattaattttctgttaaaaaaaaacacaaaactattagtattggttcctgcac 6782734  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  6782735 tttgtaaaaatattggtatt 6782754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 49628435 - 49628321
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||         | |||| ||||||||||||||| ||||||    
T  49628435 ttggaattagtccctgcactttgtaaaaatattggtattggtccctctattaactttatgttaaaaa----aaaaaactattggtattggtccctgcact 49628340  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||| ||||    
T  49628339 ttgtaaaaatattgatatt 49628321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 52346529 - 52346412
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||         |||||| ||||||||||||||| |||| |    
T  52346529 ttggaattggtccatgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaat-acaaaactattggtattggtccctgcatt 52346431  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  52346430 ttgtaaaaatattggtatt 52346412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 2731051 - 2730931
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||| |||||||||||||          ||||||| ||||||||||||||| || |    
T  2731051 ttggaattggtccctgcattttgtaaaaatattggtattggtccctctcttaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgta 2730952  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  2730951 ctttgtaaaaatattgatatt 2730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 2937122 - 2937002
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| |||||| |||||||| ||||    
T  2937122 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtttaaaaaaaaacacaaaactattggcattggtccctgca 2937023  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  2937022 ctttgtaaaaatattgatatt 2937002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 17077672 - 17077552
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  || ||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| |||| |||||||||| ||||    
T  17077672 ttggaattggtctctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattagtattggtccatgca 17077573  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  17077572 ctttgtaaaaatattggtatt 17077552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 47648201 - 47648081
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||| | |||||||||||||||||||||||| ||||||||||||||||||          ||||||  ||||||||||||||| ||||    
T  47648201 ttggaattggtccctgtactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaagctattggtattggtccctgca 47648102  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  47648101 ctttgtaaaaatattggtatt 47648081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 28838182 - 28838290
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||||          ||||||| | ||||||||||||| |||||||||||| |||    
T  28838182 cctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactgttggtattggtccctgcactttgtaaaaat 28838281  T
Q  319 attggtatt 327  Q
    |||||||||    
T  28838282 attggtatt 28838290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 47672288 - 47672227
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  47672288 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtt 47672227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 50756004 - 50755884
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||| ||| |||| |||||||||||||          ||||||| ||||||||| ||||| ||||    
T  50756004 ttggaattggtccctgcactttgtaaaaatattggtattagtccctctgttaactttctgttaaaaaaaaaacacaaaactattggtatcggtccctgca 50755905  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  50755904 ctttgtaaaaatattggtatt 50755884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 7838688 - 7838735
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttc 266  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  7838688 tccctgcattttgtaaaaatattggtattggtctctctgttaactttc 7838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 45950982 - 45951033
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  45950982 tccctgcactttgtaaaaatattggtattggtctctctgttaactttctgtt 45951033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 1342501 - 1342562
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  1342501 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 1342562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 5132495 - 5132556
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  5132495 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctattaactttctgtt 5132556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 39759265 - 39759204
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  39759265 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 39759204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 1366636 - 1366585
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  1366636 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 1366585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 2730815 - 2730866
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  2730815 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 2730866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 5132665 - 5132614
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  5132665 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 5132614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 29548857 - 29548806
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  29548857 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 29548806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 30057273 - 30057153
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    |||||||| ||| ||||| ||||||||||||||||||||| || |||| |||||||| ||||           ||||||| ||||||||||||||| |||    
T  30057273 ttggaattgatctctgcactttgtaaaaatattggtattgatccctctgttaactttgtgttaaaaaaaaaagcacaaaactattggtattggtcc-tgc 30057175  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  30057174 actttgtaaaaatattggtatt 30057153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 38717664 - 38717613
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  38717664 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 38717613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 39759030 - 39759140
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||| |||          ||||||| ||||||||||| ||| |||||||||||| |    
T  39759030 tccctgcactttgtaaaaatattggtattggtccctctgttaactttcggttaaaaaaaaaacacaaaactattggtattgatccctgcactttgtaaaa 39759129  T
Q  317 atattggtatt 327  Q
    |||||| ||||    
T  39759130 atattgatatt 39759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 39764384 - 39764494
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||| |||          ||||||| ||||||||||| ||| |||||||||||| |    
T  39764384 tccctgcactttgtaaaaatattggtattggtccctctgttaactttcggttaaaaaaaaaacacaaaactattggtattgatccctgcactttgtaaaa 39764483  T
Q  317 atattggtatt 327  Q
    |||||| ||||    
T  39764484 atattgatatt 39764494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 39950312 - 39950422
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn--cacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| ||||||||||||||||||||| ||  ||| |||||||||||||          ||||||| ||||||||||||||| |||||||||||| |    
T  39950312 tccctgcactttgtaaaaatattggtattgatccatctgttaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaa 39950411  T
Q  317 atattggtatt 327  Q
    |||||| ||||    
T  39950412 atattgatatt 39950422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 44396392 - 44396290
Alignment:
Q  227 ttttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn--cacaaaattattggtattggtccttgcactttgtaagaatattggt 324  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||          ||||||| ||||||||||||||  |||||||||||| |||||||||    
T  44396392 ttttgtaaaaatattggtattagtccctctattaattttctgttaaaaaaaaaacacaaaactattggtattggtcactgcactttgtaaaaatattggt 44396293  T
Q  325 att 327  Q
    |||    
T  44396292 att 44396290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47647937 - 47647988
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  47647937 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 47647988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47672050 - 47672101
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  47672050 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 47672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 49628205 - 49628255
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  49628205 tccctgcactttgtaaaaatattggtattggtc-ctctattaactttctgtt 49628255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 50755736 - 50755787
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  50755736 tccctgcactttataaaaatattggtattggtctctctgttaactttctgtt 50755787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 23253394 - 23253455
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||| ||| |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  23253394 ttggcattagtccatgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 23253455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 32487206 - 32487086
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| ||||||||||||||||||||| || |||| ||||| |||||||          ||||||| |||||||| |||||| ||||    
T  32487206 ttggaattggtccctgcaatttgtaaaaatattggtattgatccctctgttaaccttctgttaaaaaaaaaacacaaaactattggtactggtccctgca 32487107  T
Q  307 ctttgtaagaatattggtatt 327  Q
     ||||||| ||||||||||||    
T  32487106 gtttgtaaaaatattggtatt 32487086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 29548662 - 29548710
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  29548662 cacaaaactattggtattggtccctgcactttgtaaaaatattggtatt 29548710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 15875148 - 15875097
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||| ||||||| |||| |||||||||||||    
T  15875148 tccctgcactttgtaaaaatattggcattggtccctctgttaactttctgtt 15875097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 17077405 - 17077456
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||  ||||||| |||||||||||||    
T  17077405 tccctgcactttgtaaaaatattggtattaatctctctgttaactttctgtt 17077456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 25378941 - 25378890
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||| |||||||| |||| |||||||||||||    
T  25378941 tccctgcactttgtaaaaatattgttattggtccctctgttaactttctgtt 25378890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 29715468 - 29715519
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  29715468 tccctgtactttgtaaaaatattggtattggtccctctgttaactttctgtt 29715519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 32486939 - 32486990
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  32486939 tccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 32486990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 36466015 - 36466066
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  36466015 tccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 36466066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 40124860 - 40124911
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  40124860 tccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 40124911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 40125127 - 40125006
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn---cacaaaattattggtattggtccttgc 305  Q
    |||||||||  ||||||| ||||||||||||||||||||| ||  ||| ||||| |||||||           || |||| ||||||||||||||| |||    
T  40125127 ttggaattagcccctgcactttgtaaaaatattggtattgatccatctgttaaccttctgttaaaaaaaaaaacagaaaactattggtattggtccctgc 40125028  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  40125027 actttgtaaaaatattggtatt 40125006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 14556103 - 14556145
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  14556103 tttgtaaaaatattggtattggtccctctgttaactttctgtt 14556145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 29715727 - 29715669
Alignment:
Q  212 gaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| ||||||| | |||||||||||||| |||||||||||| | |||||||||||||    
T  29715727 gaattgatccctgtactttgtaaaaatattagtattggtctctttgttaactttctgtt 29715669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 36302753 - 36302644
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattggta 325  Q
    ||||||||||||||||||||| || |||| |||||||||||||          ||||||| |||||||||| |||| | |||||||||| |||||| |||    
T  36302753 tttgtaaaaatattggtattgatccctctgttaactttctgttaaaaaaaaaacacaaaactattggtattagtccctacactttgtaaaaatattagta 36302654  T
Q  326 ttagtctctg 335  Q
    || |||||||    
T  36302653 ttggtctctg 36302644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 25378752 - 25378797
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  25378752 aaaaatattggtattggtccctgcactttgtaaaaatattggtatt 25378797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 38019207 - 38019162
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||    
T  38019207 aaaaatattggtattggtccttgcactttgtaaaaatattgatatt 38019162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 38019299 - 38019258
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctatta 260  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
T  38019299 tccctgcactttgtaaaaatattggtattggtccctctatta 38019258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 44519409 - 44519470
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| |||| |||| |||||||||||||| ||||||||| |||| |||||||||||||    
T  44519409 ttggcattgatccttgcactttgtaaaaatattagtattggtccctctgttaactttctgtt 44519470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 14291580 - 14291533
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  14291580 ctgcactttgtaaaaatattggtattggtc-ctctgttaactttctgtt 14291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 38019241 - 38019193
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||||| || ||||||||| ||||||||||||    
T  38019241 cacaaaactattggtattggtccctgtactttgtaaaaatattggtatt 38019193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 5904897 - 5904944
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||  |||||||||||||    
T  5904897 tgcactttgtaaaaatattggtattggtccctcggttaactttctgtt 5904944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 332
Target Start/End: Complemental strand, 7838927 - 7838828
Alignment:
Q  234 aaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattggtattagtct 332  Q
    |||||||||||||||||| |||| |||||||||||||         ||||||| |||| |||||||||| | |||||||||| | |||||||||| ||||    
T  7838927 aaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattagtattggtccctacactttgtaaaattattggtattggtct 7838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 28838436 - 28838385
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| || |  ||||||||||||    
T  28838436 tccctgcactttgtaaaaatattggtattggtccctatgataactttctgtt 28838385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 52346440 - 52346409
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggt 250  Q
    ||||||||||||||||||||||||||||||||    
T  52346440 tccctgcattttgtaaaaatattggtattggt 52346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 30056997 - 30057035
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  30056997 ttggcattggtccttgcactttgtaaaaatattggtatt 30057035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 30057011 - 30057053
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaacttt 265  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  30057011 tgcactttgtaaaaatattggtattggtccctctgttaacttt 30057053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 50756004 - 50755962
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtc 331  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  50756004 ttggaattggtccctgcactttgtaaaaatattggtattagtc 50755962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 1342671 - 1342626
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  1342671 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 1342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 5905053 - 5905008
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  5905053 aaaactattggtattggtccctgcactttgtaaaaatattgatatt 5905008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 17077395 - 17077440
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| ||||||||||||| |||||    
T  17077395 ttggcattggtccctgcactttgtaaaaatattggtattaatctct 17077440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 17077566 - 17077521
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  17077566 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 17077521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 23253565 - 23253520
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  23253565 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 23253520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 25378783 - 25378828
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  25378783 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 25378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 28486795 - 28486840
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  28486795 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 28486840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 28838276 - 28838321
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  28838276 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 28838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 32487100 - 32487055
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  32487100 aaaaatattggtattggtccatgcactttgtaaaaatattgatatt 32487055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 37351116 - 37351161
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  37351116 aaaaatattggtattggtccatgcactttgtaaaaatattgatatt 37351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 38717502 - 38717547
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  38717502 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 38717547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 38872685 - 38872730
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  38872685 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 38872730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 40125020 - 40124975
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  40125020 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 40124975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 44519580 - 44519535
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  44519580 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 44519535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 47648095 - 47648050
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  47648095 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 47648050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 50755898 - 50755853
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  50755898 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 50755853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 1342685 - 1342653
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  1342685 tccctgcactttgtaaaaatattggtattggtc 1342653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 2931040 - 2931072
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  2931040 tccctgcactttgtaaaaatattggtattggtc 2931072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 23253579 - 23253547
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  23253579 tccctgcactttgtaaaaatattggtattggtc 23253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 25378738 - 25378770
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  25378738 tccctgcactttgtaaaaatattggtattggtc 25378770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 25378769 - 25378801
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  25378769 tccctgcactttgtaaaaatattggtattggtc 25378801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 28486781 - 28486813
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  28486781 tccctgcactttgtaaaaatattggtattggtc 28486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 28838262 - 28838294
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  28838262 tccctgcactttgtaaaaatattggtattggtc 28838294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 29548682 - 29548714
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  29548682 tccctgcactttgtaaaaatattggtattggtc 29548714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 30057167 - 30057127
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattg 322  Q
    |||| ||||||||||||||| |||||||||||| |||||||    
T  30057167 aaaaatattggtattggtccctgcactttgtaaaaatattg 30057127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 32487114 - 32487082
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  32487114 tccctgcagtttgtaaaaatattggtattggtc 32487082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 36466169 - 36466129
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||| |||||||||||| ||||||| ||||    
T  36466169 tattggtattggtccctgcactttgtaaaaatattgatatt 36466129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 37351102 - 37351134
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  37351102 tccctgcactttgtaaaaatattggtattggtc 37351134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 38291332 - 38291300
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  38291332 tccctgcactttgtaaaaatattggtattggtc 38291300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 38717488 - 38717520
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  38717488 tccctgcactttgtaaaaatattggtattggtc 38717520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 38872671 - 38872703
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  38872671 tccctgcactttgtaaaaatattggtattggtc 38872703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 40125034 - 40125002
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  40125034 tccctgcactttgtaaaaatattggtattggtc 40125002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 44519594 - 44519562
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  44519594 tccctgcactttgtaaaaatattggtattggtc 44519562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 45950977 - 45951017
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||||||| |||||||||||| |||||||||||| ||||||    
T  45950977 attggtccctgcactttgtaaaaatattggtattggtctct 45951017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 47648109 - 47648077
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  47648109 tccctgcactttgtaaaaatattggtattggtc 47648077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 50755912 - 50755880
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  50755912 tccctgcactttgtaaaaatattggtattggtc 50755880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 109)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 1614010 - 1614128
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  1614010 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 1614109  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  1614110 ttgtaaaaatattggtatt 1614128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 40005757 - 40005639
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  40005757 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 40005658  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  40005657 ttgtaaaaatattggtatt 40005639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 31317326 - 31317444
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||         ||||||| ||||||||||||||| ||||||    
T  31317326 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtaaaaaaaaacacaaaactattggtattggtccctgcact 31317425  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  31317426 ttgtaaaaatattggtatt 31317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 919520 - 919402
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||||        |||||||||||| ||||| |||| ||||||    
T  919520 ttggaattagtccctccactttgtaaaaatattggtattgatctctctgttaactttctgttaaaaaaaacacaaaattattagtattagtccctgcact 919421  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  919420 ttgtaaaaatattggtatt 919402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 18436858 - 18436976
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||        ||||||| ||||||||||| ||| ||||||    
T  18436858 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaacacaaaactattggtattgatccctgcact 18436957  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  18436958 ttgtaaaaatattggtatt 18436976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 209 - 328
Target Start/End: Complemental strand, 42208143 - 42208023
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||         ||||||| ||||||||||  |||||||||    
T  42208143 ttggaattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaccacaaaactattggtattaatccttgcac 42208044  T
Q  308 tttgtaagaatattggtatta 328  Q
    ||||||| |||||||||||||    
T  42208043 tttgtaaaaatattggtatta 42208023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 16335402 - 16335281
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||||| |||    
T  16335402 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccctgc 16335303  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  16335302 actttgtaaaaatattggtatt 16335281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 45311579 - 45311460
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||| |||         ||||||| ||||||||||||||| |||||    
T  45311579 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttccgttaaaaaaaaacacaaaactattggtattggtccctgcac 45311480  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  45311479 tttgtaaaaatattggtatt 45311460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 43979343 - 43979463
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||| ||||||||          ||||||| ||||||||||||||| ||||    
T  43979343 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaattttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 43979442  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  43979443 ctttgtaaaaatattggtatt 43979463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 46008616 - 46008736
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| |||||| |||||||||||||    
T  46008616 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggaattggtccttgca 46008715  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  46008716 ctttgtaaaaatattggtatt 46008736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 49264207 - 49264098
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||||||||| ||    
T  49264207 tccctgtactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaa 49264108  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  49264107 tattggtatt 49264098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 51716191 - 51716311
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||| |||| |||| |||||||||||||||||||||||| |||| |||||||||||||          ||||||| ||||||||||||||| ||||    
T  51716191 ttggaattgatccttgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 51716290  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  51716291 ctttgtaaaaatattggtatt 51716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 13199348 - 13199229
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| ||||||||| |||||||||||||||||||||||| || |||||||||||||||          |||||| ||||||||||||||| ||||     
T  13199348 ttggaattgatccctgcactttgtaaaaatattggtattggtccctttattaactttctgttaaaaaaaaatacaaaactattggtattggtccctgcat 13199249  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  13199248 tttgtaaaaatattggtatt 13199229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 15169317 - 15169198
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         | ||||| ||||||| ||||||| |||||    
T  15169317 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacgcaaaactattggtgttggtccctgcac 15169218  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  15169217 tttgtaaaaatattggtatt 15169198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 28693218 - 28693119
Alignment:
Q  229 ttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||||||||||| ||||||||||||||||||         ||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  28693218 ttgtaaaaatattggtattggtccctctattaactttctgttaaagaaaaacacaaaactattagtattggtccttgcactttgtaaaaatattggtatt 28693119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 45226351 - 45226233
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||  |||| |||||||||||||        ||||||| ||||||| ||||||| ||||||    
T  45226351 ttggaattggtccctgcactttgtaaaaatattggtattggttcctctgttaactttctgttaaaaaaaacacaaaactattggtcttggtccctgcact 45226252  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||| ||||    
T  45226251 ttgtaaaaatattgatatt 45226233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 32328368 - 32328259
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| ||||         ||||||| ||||||||||||||| |||||||||||| ||    
T  32328368 tccctgcactttgtaaaaatattggtattggtccctctattaactttttgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaa 32328269  T
Q  318 tattggtatt 327  Q
    ||||| ||||    
T  32328268 tattgatatt 32328259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 45311488 - 45311379
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||         ||||||| ||||||||||||||| |||||||||||| ||    
T  45311488 tccctgcactttgtaaaaatattggtattggtccctctattaactttccgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaa 45311389  T
Q  318 tattggtatt 327  Q
    ||||| ||||    
T  45311388 tattgatatt 45311379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 51892976 - 51892856
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||||| || |||||||||||||||||||||||| |||| |||||||||||||          ||||||||||||||||||||||| ||||    
T  51892976 ttggaattggtccctacactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaattattggtattggtccctgca 51892877  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  51892876 ctttgtaaaaatattgatatt 51892856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 321727 - 321835
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||        ||||||| ||||| ||||||| | |||||||||||| |||    
T  321727 tccctgcactttgtaaaaatattggtattggtccctctattaactttctattaaaaaaaacacaaaactattgatattggttcctgcactttgtaaaaat 321826  T
Q  319 attggtatt 327  Q
    |||| ||||    
T  321827 attgatatt 321835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 330
Target Start/End: Complemental strand, 23206008 - 23205889
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||| ||        ||||||| ||||||||||||||| ||||||    
T  23206008 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctattaactttctatt-aaaaaaacacaaaactattggtattggtcc-tgcact 23205911  T
Q  309 ttgtaagaatattggtattagt 330  Q
    |||||| ||||||| |||||||    
T  23205910 ttgtaaaaatattgatattagt 23205889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 35377730 - 35377849
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| || ||    
T  35377730 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgtac 35377829  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| |||||| |||||    
T  35377830 tttgtaaaaatattagtatt 35377849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 47690635 - 47690512
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||||| || ||||||||||||||||||||| || |||| ||||| |||||||         ||||||| ||||||||||||||| |||||    
T  47690635 ttggaattggtccctacactttgtaaaaatattggtattgatccctctgttaaccttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 47690536  T
Q  308 tttgtaagaatattggtattagtc 331  Q
    ||||||| ||||||||||||||||    
T  47690535 tttgtaaaaatattggtattagtc 47690512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 42598978 - 42599039
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  42598978 ttggaattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 42599039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 1922577 - 1922683
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| |||||||||||| |||||    
T  1922577 tgcactttataaaaatattggtattggtccctctattaactttctgtttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaatat 1922676  T
Q  321 tggtatt 327  Q
    || ||||    
T  1922677 tgatatt 1922683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 5814119 - 5813996
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||||||||| || |||| |||||||||||||         ||||||| ||||| |||| |||| |||||    
T  5814119 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctgttaactttctgttaaaaaaaaacacaaaactattgatattagtccctgcac 5814020  T
Q  308 tttgtaagaatattggtattagtc 331  Q
    ||||||| |||||| |||||||||    
T  5814019 tttgtaaaaatattagtattagtc 5813996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 28693003 - 28693054
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  28693003 tccctacactttgtaaaaatattggtattggtctctctattaactttctgtt 28693054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 41965209 - 41965328
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||| |||||||  || |||||||||||||||         || |||| ||||||||||||||| |||||    
T  41965209 ttggaattggtccctgcactttgtaaaaatattgatattggttcctttattaactttctgttaaaaaaaaacagaaaactattggtattggtccctgcac 41965308  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  41965309 tttgtaaaaatattggtatt 41965328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 51892742 - 51892793
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  51892742 tccctgcactttgtaaaaatattggtattggtctctctgttaactttctgtt 51892793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 11021386 - 11021496
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctg-ttnnnnnnnncac-aaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||||| |         ||| |||| ||||||||||||||| |||||||||||| |    
T  11021386 tccctgcactttgtaaaaatattggtattggtccctctattaattttctgataaaaaaaaacacaaaaactattggtattggtccctgcactttgtaaaa 11021485  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  11021486 atattggtatt 11021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 29526590 - 29526472
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  || ||||| ||||||||||||||||||| |||| ||||||||| ||||||||        ||||||| |||| ||||| ||||  |||||    
T  29526590 ttggaattggtctctgcactttgtaaaaatattggtatcggtccctctattaattttctgttaaaaaaaacacaaaactatttgtattagtcccggcact 29526491  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  29526490 ttgtaaaaatattggtatt 29526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 30560642 - 30560581
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  30560642 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 30560581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 40147419 - 40147480
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  40147419 ttggaattggtccctgcactttgtaaaaatattggtattggtctctttgttaactttctgtt 40147480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 44589328 - 44589220
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||          ||||||| ||||| ||||||||| |||||||||||| |||    
T  44589328 cctgcactttgtaaaaatattggtattggtccttctattaactttctgttaaaaaaaaaacacaaaactattgatattggtccctgcactttgtaaaaat 44589229  T
Q  319 attggtatt 327  Q
    |||| ||||    
T  44589228 attgatatt 44589220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 11021641 - 11021593
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  11021641 tccctgcactttgtaaaaatattggtattggtccctctattaactttct 11021593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 18437126 - 18437070
Alignment:
Q  214 attaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  18437126 attagtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 18437070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 46008698 - 46008758
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgt 269  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  46008698 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgt 46008758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 1614268 - 1614221
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1614268 tgcactttgtaaaaatattggtattggtctctctgttaactttctgtt 1614221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 15169021 - 15169072
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  15169021 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 15169072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 40005494 - 40005545
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  40005494 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 40005545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 53940478 - 53940597
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaac-tttctgttnnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| || ||||||| ||| | ||        ||||||| ||||||||||||||| | |||    
T  53940478 ttggaattggtccatgcactttgtaaaaatattggtattggtccctttattaactttttttttaaaaaaaacacaaaactattggtattggtccctacac 53940577  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  53940578 tttgtaaaaatattggtatt 53940597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 919265 - 919307
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  919265 tttgtaaaaatattggtattggtctctcttttaactttctgtt 919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 52096635 - 52096753
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||| || ||||||||||||||||||||||||  | | |||||||||||||        ||||||| | || |||||||||| ||||||    
T  52096635 ttggaattggtccctacactttgtaaaaatattggtattggtccttttgttaactttctgttaaaaaaaacacaaaacttttagtattggtccctgcact 52096734  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| | ||||||||||    
T  52096735 ttgtaaaattattggtatt 52096753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 8444736 - 8444847
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgcactttgtaag 315  Q
    ||||| || ||||||||||||||||||||| || ||||||||||||||||||           ||||||| |||||||||| |||| ||||||||||||     
T  8444736 tccctacactttgtaaaaatattggtattgatccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattagtccctgcactttgtaaa 8444835  T
Q  316 aatattggtatt 327  Q
    ||||||| ||||    
T  8444836 aatattgatatt 8444847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 49263943 - 49264004
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| |||| |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  49263943 ttggcattgatccttgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 49264004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 52096884 - 52096823
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  52096884 ttggcattgatccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 52096823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 16335125 - 16335181
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaacttt 265  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  16335125 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaacttt 16335181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 29526331 - 29526379
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  29526331 ctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 29526379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 32384248 - 32384196
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaa 261  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||||| ||||    
T  32384248 ttggaattggtccctgcactttgtaaaaatattggtattggtctctctgttaa 32384196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 44589105 - 44589153
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  44589105 tccctgcactttgtaaaaatattggtattggtccctctgttaactttct 44589153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 321981 - 321930
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||| ||||||| |||| |||||||||||||    
T  321981 tccctgcactttgtaaaaatattggcattggtccctctgttaactttctgtt 321930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 1922792 - 1922745
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  1922792 tgcactttgtaaaaatattggcattggtccctctattaactttctgtt 1922745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 8444962 - 8444911
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||| | |||| |||||||||||||    
T  8444962 tccctgcactttgtaaaaatattggtattggcccctctgttaactttctgtt 8444911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 13199052 - 13199103
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||| |||||||||||||||||||| |||| |||||||||||||    
T  13199052 tccctgcactttttaaaaatattggtattggtccctctgttaactttctgtt 13199103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 23205777 - 23205828
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  23205777 tccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 23205828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 31317590 - 31317539
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||| ||||||    
T  31317590 tccctgcactttgtaaaaatattggtattggtccctctgttaactgtctgtt 31317539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 35377989 - 35377942
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  35377989 tgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 35377942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 39210590 - 39210539
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||| |||||||||| |||| |||||||||||||    
T  39210590 tccctgcactttgtaaaaatatcggtattggtccctctgttaactttctgtt 39210539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 41965473 - 41965422
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  41965473 tccctgcactttgtaaaaatattggtattggtccctctgttaactttttgtt 41965422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 43561886 - 43561937
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||||||||||||||||||||||||||| || | |||||||| ||||    
T  43561886 tccctgcattttgtaaaaatattggtattggtccctatgttaactttttgtt 43561937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 45848607 - 45848556
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  45848607 tccctacactttgtaaaaatattggtattggtccctctgttaactttctgtt 45848556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 46008958 - 46008907
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  46008958 tccctgcactttgtaaaaatattggtattggttcctctgttaactttctgtt 46008907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47690371 - 47690422
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  47690371 tccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 47690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 42495999 - 42496057
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    ||||||||  |||||||| ||||||||||||||||||||| || |||| ||||||||||    
T  42495999 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctgttaactttct 42496057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 45226121 - 45226167
Alignment:
Q  218 atccctgcattttgtaaaaatattggtattggtctctctattaactt 264  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||    
T  45226121 atccctgcactttgtaaaaatattggtattggtccctctgttaactt 45226167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 13199243 - 13199198
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  13199243 aaaaatattggtattggtccctgcactttgtaaaaatattggtatt 13199198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 15169212 - 15169167
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  15169212 aaaaatattggtattggtccctgcactttgtaaaaatattggtatt 15169167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 51716297 - 51716342
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  51716297 aaaaatattggtattggtccctgcactttgtaaaaatattggtatt 51716342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 52096739 - 52096784
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||    
T  52096739 aaaattattggtattggtccctgcactttgtaaaactattggtatt 52096784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 1614277 - 1614237
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtattagtctct 334  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  1614277 attggtccttgcactttgtaaaaatattggtattggtctct 1614237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 13199257 - 13199225
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||||||||||||||||||||||||||||    
T  13199257 tccctgcattttgtaaaaatattggtattggtc 13199225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 32328144 - 32328188
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||    
T  32328144 tgcactttgtaaaaatattggtattggtttctctgttaactttct 32328188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 51716487 - 51716436
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||| ||| |||| |||||||||||||    
T  51716487 tccctacactttgtaaaaatattggtattagtccctctgttaactttctgtt 51716436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 18436938 - 18436980
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||    
T  18436938 ttggtattgatccctgcactttgtaaaaatattggtattggtc 18436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 35378003 - 35377965
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  35378003 ttggtattggtccatgcactttgtaaaaatattggtatt 35377965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 46008968 - 46008930
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  46008968 ttggtattggtccctgcactttgtaaaaatattggtatt 46008930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 53940707 - 53940665
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaa 261  Q
    |||||||| |||||||||||||||||||||||| |||| ||||    
T  53940707 tccctgcactttgtaaaaatattggtattggtccctctgttaa 53940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 888146 - 888183
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctct 256  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  888146 tccctgcactttgtaaaaatattggtattggtccctct 888183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 919416 - 919371
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  919416 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 919371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 919435 - 919398
Alignment:
Q  214 attaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  919435 attagtccctgcactttgtaaaaatattggtattggtc 919398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 1614114 - 1614159
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  1614114 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 1614159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 13086597 - 13086536
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| |||| |||| ||||||||||||||||||||||||  ||| |||| ||||||||    
T  13086597 ttggcattgatccatgcactttgtaaaaatattggtattggtccatctgttaagtttctgtt 13086536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 13199212 - 13199167
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  13199212 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 13199167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 15169181 - 15169136
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  15169181 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 15169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 16335295 - 16335250
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  16335295 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 16335250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 18436962 - 18437007
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  18436962 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 18437007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 29526486 - 29526441
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  29526486 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 29526441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 32328135 - 32328168
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||||||||| ||||||||||||    
T  32328135 attggtccttgcactttgtaaaaatattggtatt 32328168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 32384248 - 32384203
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  32384248 ttggaattggtccctgcactttgtaaaaatattggtattggtctct 32384203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 40005481 - 40005522
Alignment:
Q  286 ttattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| |||||||| |||||||||||| ||||||||||||    
T  40005481 ttattggcattggtccctgcactttgtaaaaatattggtatt 40005522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 40147419 - 40147464
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  40147419 ttggaattggtccctgcactttgtaaaaatattggtattggtctct 40147464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 41965314 - 41965359
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  41965314 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 41965359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 42208031 - 42207990
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggt 250  Q
    |||| ||||||||||||| ||||||||||||||| |||||||    
T  42208031 ttggtattaatccctgcactttgtaaaaatattgatattggt 42207990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 49264112 - 49264067
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  49264112 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 49264067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 51892732 - 51892777
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  51892732 ttggcattggtccctgcactttgtaaaaatattggtattggtctct 51892777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 53940583 - 53940628
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  53940583 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 53940628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 919251 - 919291
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtattagtctct 334  Q
    ||||||||||| ||||||||| |||||||||||| ||||||    
T  919251 attggtccttgtactttgtaaaaatattggtattggtctct 919291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 1614100 - 1614132
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  1614100 tccctgcactttgtaaaaatattggtattggtc 1614132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 11021468 - 11021500
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  11021468 tccctgcactttgtaaaaatattggtattggtc 11021500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 13199226 - 13199194
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  13199226 tccctgcactttgtaaaaatattggtattggtc 13199194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 15169195 - 15169163
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  15169195 tccctgcactttgtaaaaatattggtattggtc 15169163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 15169226 - 15169194
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  15169226 tccctgcactttgtaaaaatattggtattggtc 15169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 16335309 - 16335277
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  16335309 tccctgcactttgtaaaaatattggtattggtc 16335277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 40005667 - 40005635
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  40005667 tccctgcactttgtaaaaatattggtattggtc 40005635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 40147587 - 40147547
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattg 322  Q
    |||| ||||||||||||||| |||||||||||| |||||||    
T  40147587 aaaaatattggtattggtccctgcactttgtaaaaatattg 40147547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 41965300 - 41965332
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  41965300 tccctgcactttgtaaaaatattggtattggtc 41965332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 43979435 - 43979467
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  43979435 tccctgcactttgtaaaaatattggtattggtc 43979467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 49264126 - 49264094
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  49264126 tccctgcactttgtaaaaatattggtattggtc 49264094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 51716283 - 51716315
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  51716283 tccctgcactttgtaaaaatattggtattggtc 51716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 8145016 - 8144897
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||| |||||||||| |||| ||||||    
T  8145016 ttggaattgatccctgcattttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattagtccctgcact 8144917  T
Q  309 ttgt-aagaatattggtatt 327  Q
    |||| || ||||||||||||    
T  8144916 ttgtaaaaaatattggtatt 8144897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 15440601 - 15440707
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||        ||||||| ||||||||||||||| |||||||||||| |||||    
T  15440601 cctgcactttgtaaaaatattggtattggtctctatattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaatat 15440700  T
Q  321 tggtatt 327  Q
    |||||||    
T  15440701 tggtatt 15440707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 38790018 - 38790136
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| || |||    
T  38790018 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccgtgtact 38790117  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  38790118 ttgtaaaaatattggtatt 38790136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 335
Target Start/End: Complemental strand, 2268598 - 2268471
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| |||| |||| ||||||||||||||| |||||||| ||||||||||||||||||         ||||||| ||||| ||||||||| |||||    
T  2268598 ttggaattgatccttgcactttgtaaaaatattgatattggtccctctattaactttctgttaaaaaaaaacacaaaactattgttattggtccctgcac 2268499  T
Q  308 tttgtaagaatattggtattagtctctg 335  Q
    ||||||| |||||||||||| |||||||    
T  2268498 tttgtaaaaatattggtattggtctctg 2268471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 11062417 - 11062536
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||||||||||||  |||||||||||||||||         ||||||||||||||||||||||| |||||    
T  11062417 ttggaattggtccctgcactttgtaaaaatattggtattggtccatctattaactttctgttaaaaaaaaacacaaaattattggtattggtccatgcac 11062516  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  11062517 tttgtaaaaatattgatatt 11062536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 32792673 - 32792554
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||         | ||||| ||||||||||||||| |||||    
T  32792673 ttggaattgatccctgcattttgtaaaaatattggtattggttcctctattaactttctgttaaaaaaaaactcaaaactattggtattggtccctgcac 32792574  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  32792573 tttgtaaaaatattgatatt 32792554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 39412221 - 39412340
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  39412221 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 39412320  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  39412321 tttgtaaaaatattgatatt 39412340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 18674192 - 18674075
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| ||||        ||||||| |||||| |||||||| ||||||    
T  18674192 ttggaattggtccctgcactttgtaaaaatattggtattggtctctctattaactttttgtt-aaaaaaacacaaaactattggcattggtccctgcact 18674094  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||| ||||    
T  18674093 ttgtaaaaatattgatatt 18674075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 23592815 - 23592706
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||         ||||||| ||||||||||||||| |||||||||||| ||    
T  23592815 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaa 23592716  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  23592715 tattggtatt 23592706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 4621014 - 4620895
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| ||||||||||||||||||||||||  ||| |||||||||||||         ||||||| |||||||||||||||||||||    
T  4621014 ttggaattggtccatgcactttgtaaaaatattggtattggtccatctgttaactttctgttaaaaaaaaacacaaaactattggtattggtccttgcac 4620915  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  4620914 tttgtaaaaatattggtatt 4620895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 5214335 - 5214456
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||||| |||    
T  5214335 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccctgc 5214434  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| |||||| |||||    
T  5214435 actttgtaaaaatattcgtatt 5214456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 212 - 327
Target Start/End: Original strand, 30491969 - 30492084
Alignment:
Q  212 gaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttg 311  Q
    ||||| ||| ||||| |||||||||||||||||||||||  ||||||||||||||||||        ||||||| ||||| ||||||||| |||||||||    
T  30491969 gaattgatctctgcactttgtaaaaatattggtattggttcctctattaactttctgttaaaaaaaacacaaaactattgatattggtccctgcactttg 30492068  T
Q  312 taagaatattggtatt 327  Q
    ||| ||||||| ||||    
T  30492069 taaaaatattgatatt 30492084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 2033819 - 2033927
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncaca--aaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||| ||||        ||||  |||||||||| ||||||||||||||||||||| |||    
T  2033819 cctgcactttgtaaaaatattggtattggtccctctattaattttatgttaaaaaaaacacacaaaattattggcattggtccttgcactttgtaaaaat 2033918  T
Q  319 attggtatt 327  Q
    |||||||||    
T  2033919 attggtatt 2033927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 18705838 - 18705718
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  18705838 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 18705739  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  18705738 ctttgtaaaaatattgatatt 18705718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 5907590 - 5907484
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||          ||||||| ||||||||||||||  |||||||||||| |||||    
T  5907590 tgcattttgtaaaaatattggtattgatctctctgttaactttctgttaaaaaaaaaacacaaaactattggtattggtctctgcactttgtaaaaatat 5907491  T
Q  321 tggtatt 327  Q
    |||||||    
T  5907490 tggtatt 5907484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 13198217 - 13198107
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||||||||||          ||||||| ||||||||||| |||||||||||||| | |    
T  13198217 tccctgcactttgtaaaaatattgatattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattgttccttgcactttgtcaaa 13198118  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  13198117 atattggtatt 13198107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 18036298 - 18036410
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt----nnnnnnnncacaaaattattggtattggtccttgcactttgtaa 314  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||            ||||||| ||||| ||||||||| ||||||||||||    
T  18036298 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaaacacaaaactattgctattggtccctgcactttgtaa 18036397  T
Q  315 gaatattggtatt 327  Q
     ||||||||||||    
T  18036398 aaatattggtatt 18036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 25945671 - 25945552
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||| ||||||||         ||||||| ||||||||||| ||| |||||    
T  25945671 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaaatttctgttaaaaaaaaacacaaaactattggtattgatccctgcac 25945572  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  25945571 tttgtaaaaatattggtatt 25945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 26408981 - 26408860
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||| ||| ||||           ||||||| ||||||||||||||| |||    
T  26408981 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaattttttgttaaaaaaaaaaacacaaaactattggtattggtccctgc 26408882  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  26408881 actttgtaaaaatattggtatt 26408860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 27858467 - 27858518
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27858467 tccctgcactttgtaaaaatattggtattggtctctctattaactttctgtt 27858518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 21747992 - 21747886
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    |||||| ||||||||||||||||||||||||  ||| |||||||||||||        ||||||| |||||||||| |||| |||||||||||| |||||    
T  21747992 cctgcactttgtaaaaatattggtattggtccatctcttaactttctgttaaaaaaaacacaaaactattggtattagtccctgcactttgtaaaaatat 21747893  T
Q  321 tggtatt 327  Q
    | |||||    
T  21747892 tagtatt 21747886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 3578069 - 3578189
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn--cacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||||| || |||||||||||||||||| ||||| |||| |||||||||||||          ||||||| ||||||||||||||| ||||    
T  3578069 ttggaattggtccctccactttgtaaaaatattggtactggtccctctcttaactttctgttaaaaataaaacacaaaactattggtattggtccctgca 3578168  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  3578169 ctttgtaaaaatattggtatt 3578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 17964993 - 17964872
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||| ||           ||||||| |||| |||||||||| | |    
T  17964993 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctattaaaaaaaaaaacacaaaactattagtattggtccctac 17964894  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  17964893 actttgtaaaaatattggtatt 17964872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 31912994 - 31912875
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| |||  |||||||||| |||||    
T  31912994 ttggaattggtccatgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactataagtattggtccctgcac 31912895  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  31912894 tttgtaaaaatattgatatt 31912875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 32792442 - 32792493
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  32792442 tccctgcactttgtaaaaatattggtattggtctctctgttaactttctgtt 32792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 323
Target Start/End: Original strand, 8343109 - 8343221
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||         ||| || ||||||||||||||| ||||||    
T  8343109 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaa-acacaactattggtattggtcc-tgcact 8343206  T
Q  309 ttgtaagaatattgg 323  Q
    |||||| ||||||||    
T  8343207 ttgtaaaaatattgg 8343221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 16968783 - 16968901
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||| || ||| |||||||||||||||||||   |||||||||||||||||        ||||||| ||||||||||| ||| ||||||    
T  16968783 ttggaattggtcccttcactttataaaaatattggtattggttcttctattaactttctgttaaaaaaaacacaaaactattggtattgatccctgcact 16968882  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||| ||||    
T  16968883 ttgtaaaaatattgatatt 16968901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 4717157 - 4717040
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| ||||| ||||||||| |||||||| |||| |||||||| ||||        ||||||| |||||||||||| || ||||||    
T  4717157 ttggaattggtccctgcactttgtgaaaatattgatattggtccctctgttaactttatgttaaaaaaa-cacaaaagtattggtattggaccctgcact 4717059  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  4717058 ttgtaaaaatattggtatt 4717040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 13197949 - 13198010
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  13197949 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 13198010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 20166131 - 20166251
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||| ||| |||| |||||||||||||||||||| ||| |||| |||||||||| ||          ||||||| ||||||||||||||| ||||    
T  20166131 ttggaattagtccatgcactttgtaaaaatattggtattagtccctctgttaactttctattaaaaaaaaaacacaaaactattggtattggtccctgca 20166230  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  20166231 ctttgtaaaaatattgatatt 20166251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 23910644 - 23910522
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn----cacaaaattattggtattggtccttg 304  Q
    ||||||||  |||||||| ||| ||||||||||||||| |||| ||||||||||||| ||||            ||||||| ||||||||||||||| ||    
T  23910644 ttggaattggtccctgcactttataaaaatattggtatcggtccctctattaactttttgttaaaaaaaaaaaacacaaaactattggtattggtccatg 23910545  T
Q  305 cactttgtaagaatattggtatt 327  Q
    |||||||||| ||||||||||||    
T  23910544 cactttgtaaaaatattggtatt 23910522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 34929605 - 34929666
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  34929605 ttggaattggtccctgcactttgcaaaaatattggtattggtccctctattaactttctgtt 34929666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 5214600 - 5214549
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  5214600 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 5214549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 5907338 - 5907389
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  5907338 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 5907389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 8144752 - 8144803
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  8144752 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 8144803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 20166400 - 20166349
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  20166400 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 20166349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 22619526 - 22619577
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  22619526 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 22619577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 23592559 - 23592610
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  23592559 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 23592610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 23910374 - 23910425
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  23910374 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 23910425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 25945408 - 25945459
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  25945408 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 25945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 26408716 - 26408767
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  26408716 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 26408767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 38790283 - 38790232
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  38790283 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 38790232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 18036556 - 18036508
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  18036556 tccctacactttgtaaaaatattggtattggtctctctgttaactttct 18036508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 973906 - 973957
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  973906 tccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 973957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 3023864 - 3023813
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  3023864 tccctgcattttgtaaaagtattggtatcggtccctctgttaactttctgtt 3023813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 9177203 - 9177084
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||||| || |||||||||||||| ||||||||| |||| |||||||| ||||         ||||||| |||||||||| |||| |||||    
T  9177203 ttggaattggtccctccactttgtaaaaatatttgtattggtccctctgttaactttttgttaaaaaaatacacaaaactattggtattagtccctgcac 9177104  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| | ||||||||||    
T  9177103 tttgtaaaattattggtatt 9177084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 11062652 - 11062601
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||| ||||||||| |||| |||||||||||||    
T  11062652 tccctgcactttgtaaaaatattagtattggtccctctgttaactttctgtt 11062601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 15442953 - 15442902
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  15442953 tccctgcactttgtaaaaatattggtattggtccttctgttaactttctgtt 15442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 16969019 - 16968968
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  16969019 tccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 16968968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 17964728 - 17964779
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||| ||||||||||||||||| |||| |||||||||||||    
T  17964728 tccctgcactttgtataaatattggtattggtccctctgttaactttctgtt 17964779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 18705602 - 18705653
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  18705602 tccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 18705653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 38244902 - 38244953
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  38244902 tccctgcactttgtaaaaatattggtattggtccctctgttaaatttctgtt 38244953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 39412453 - 39412402
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  39412453 tccctgtactttgtaaaaatattggtattggtccctctgttaactttctgtt 39412402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 3578292 - 3578250
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaa 261  Q
    |||||||| ||||||||||||||||||||||||||||| ||||    
T  3578292 tccctgcactttgtaaaaatattggtattggtctctctgttaa 3578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 4716906 - 4716948
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  4716906 tttgtaaaaatattggtattgatccctctattaactttctgtt 4716948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 23910536 - 23910491
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||    
T  23910536 aaaaatattggtattggtccttgcactttgtaaaaatattgatatt 23910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 2034075 - 2034023
Alignment:
Q  218 atccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||| | |||||||||||||||||||||||| |||  |||||||||||||    
T  2034075 atccctgtactttgtaaaaatattggtattggtccctcagttaactttctgtt 2034023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 22619721 - 22619673
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| |||||||||||||||  ||||||||||| ||||||||||||    
T  22619721 cacaaaactattggtattggtcccagcactttgtaaaaatattggtatt 22619673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 2268335 - 2268386
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||  | | |||||||||||||    
T  2268335 tccctgcactttgtaaaaatattggtattggtccatttgttaactttctgtt 2268386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 18673960 - 18674011
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||| ||||    
T  18673960 tccctgcactttgtaaaaatattggtattggttcctctgttaactttttgtt 18674011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 30492202 - 30492151
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||| ||||    
T  30492202 tccctacactttgtaaaaatattggtattggtccctctgttaactttatgtt 30492151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 31912782 - 31912833
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||   ||| |||||||||||||    
T  31912782 tccctgcactttgtaaaaatattggtattggttcttctgttaactttctgtt 31912833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 8343363 - 8343321
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaa 261  Q
    |||||||| |||||||||||||||||||||||| |||| ||||    
T  8343363 tccctgcactttgtaaaaatattggtattggtccctctgttaa 8343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 22619770 - 22619728
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaa 261  Q
    |||||||| |||||||||||||||||||||||| |||| ||||    
T  22619770 tccctgcactttgtaaaaatattggtattggtccctctgttaa 22619728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 25945590 - 25945548
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||    
T  25945590 ttggtattgatccctgcactttgtaaaaatattggtattggtc 25945548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 38245085 - 38245043
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    ||||||||  |||||||| ||||||||||||||||||||||||    
T  38245085 ttggaattggtccctgcactttgtaaaaatattggtattggtc 38245043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 3023473 - 3023522
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctg 268  Q
    |||||| | ||||||||||||||||||||| || |||| |||||||||||    
T  3023473 tccctgtactttgtaaaaatattggtattgatcactctgttaactttctg 3023522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 3578302 - 3578257
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  3578302 ttggcattggtccctgcactttgtaaaaatattggtattggtctct 3578257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 4620909 - 4620864
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  4620909 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 4620864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 5950631 - 5950672
Alignment:
Q  286 ttattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||| |||||||||||| | ||||||||||    
T  5950631 ttattggtattggtccatgcactttgtaaaactattggtatt 5950672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 8144911 - 8144866
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  8144911 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 8144866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 8343211 - 8343256
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| |||||| ||||||||||||||||||||| ||||||| ||||    
T  8343211 aaaaatattggaattggtccttgcactttgtaaaaatattgatatt 8343256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 15440693 - 15440738
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  15440693 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 15440738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 17964886 - 17964841
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  17964886 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 17964841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 18036396 - 18036441
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  18036396 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 18036441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 18674192 - 18674147
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  18674192 ttggaattggtccctgcactttgtaaaaatattggtattggtctct 18674147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 22619687 - 22619642
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  22619687 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 22619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 23592720 - 23592675
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  23592720 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 23592675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 25945566 - 25945521
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  25945566 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 25945521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 32792432 - 32792477
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  32792432 ttggcattggtccctgcactttgtaaaaatattggtattggtctct 32792477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 38245061 - 38245016
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  38245061 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 38245016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 15440679 - 15440711
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  15440679 tccctgcactttgtaaaaatattggtattggtc 15440711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 18036382 - 18036414
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  18036382 tccctgcactttgtaaaaatattggtattggtc 18036414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 23592734 - 23592702
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  23592734 tccctgcactttgtaaaaatattggtattggtc 23592702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 26408888 - 26408856
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  26408888 tccctgcactttgtaaaaatattggtattggtc 26408856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 27858462 - 27858502
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||||||| |||||||||||| |||||||||||| ||||||    
T  27858462 attggtccctgcactttgtaaaaatattggtattggtctct 27858502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 27858642 - 27858610
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  27858642 tccctgcactttgtaaaaatattggtattggtc 27858610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 6372 - 6254
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||         ||||||| ||||||||||||||| ||||||    
T  6372 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtaaaaaaaaacacaaaactattggtattggtccctgcact 6273  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  6272 ttgtaaaaatattggtatt 6254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 6098 - 6159
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||| ||||||    
T  6098 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactgtctgtt 6159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 40790877 - 40790995
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||||||||| ||||||    
T  40790877 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaacacaaaactattggtattggtccctgcact 40790976  T
Q  309 ttgtaagaatattggtatt 327  Q
    || ||| ||||||||||||    
T  40790977 ttataaaaatattggtatt 40790995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 21441037 - 21441151
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||| |||||    
T  21441037 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaattattggtattggtccctgcac 21441136  T
Q  308 tttgtaagaatattg 322  Q
    ||||||| |||||||    
T  21441137 tttgtaaaaatattg 21441151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 11692224 - 11692344
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  11692224 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 11692323  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  11692324 ctttgtaaaaatattggtatt 11692344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 44638482 - 44638587
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||| |||| |||||||||||||||||||||||||||||||||||||||||||        | ||||| ||||||||||||||| ||||||    
T  44638482 ttggaattggtccatgcactttgtaaaaatattggtattggtctctctattaactttctgttaaaaaaaacgcaaaactattggtattggtccctgcact 44638581  T
Q  309 ttgtaa 314  Q
    ||||||    
T  44638582 ttgtaa 44638587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 49665639 - 49665519
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  49665639 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 49665540  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  49665539 ctttgtaaaaatattgatatt 49665519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 51761102 - 51760993
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||||| ||| ||    
T  51761102 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttcaaaaaaaacacaaaactattggtattggtccctgcactttataaaaa 51761003  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  51761002 tattggtatt 51760993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 47358500 - 47358380
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  47358500 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 47358401  T
Q  308 tttgt-aagaatattggtatt 327  Q
    ||||| || ||||||||||||    
T  47358400 tttgtaaaaaatattggtatt 47358380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 38443629 - 38443510
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||||||||||||  |||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  38443629 ttggaattggtccctgcactttgtaaaaatattggtattggtccttctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 38443530  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  38443529 tttgtaaaaatattgatatt 38443510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 219 - 324
Target Start/End: Complemental strand, 54090172 - 54090064
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgcactttgtaag 315  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||||| ||||||||||||     
T  54090172 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaa 54090073  T
Q  316 aatattggt 324  Q
    |||||||||    
T  54090072 aatattggt 54090064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 55328509 - 55328626
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||||||||||||||||||||| ||||||||| || |||||||||| ||||        ||||||| ||||||||||||||  ||||||    
T  55328509 ttggaattggtccctgcattttgtaaaaatattcgtattggtccctttattaacttt-tgttaaaaaaaacacaaaactattggtattggtctctgcact 55328607  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  55328608 ttgtaaaaatattggtatt 55328626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 335
Target Start/End: Complemental strand, 21561143 - 21561015
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||| ||||||||| ||||    
T  21561143 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattgttattggtccctgca 21561044  T
Q  307 ctttgtaagaatattggtattagtctctg 335  Q
    |||||||| |||  ||||||| |||||||    
T  21561043 ctttgtaaaaattatggtattggtctctg 21561015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 29015797 - 29015907
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||          ||||||| ||||| ||||||||| |||||||||||| |    
T  29015797 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactattgatattggtccctgcactttgtaaaa 29015896  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  29015897 atattggtatt 29015907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 33092104 - 33092225
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| |||||||||||||||  ||    
T  33092104 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccccgc 33092203  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  33092204 actttgtaaaaatattggtatt 33092225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 34682614 - 34682505
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||| ||| |||||||||||| ||    
T  34682614 cctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattgctccctgcactttgtaaaaa 34682515  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  34682514 tattggtatt 34682505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 54803103 - 54803222
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| |||| |||||||||||||         ||||||| ||||||||||||||| |||||    
T  54803103 ttggaattggtccatgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattggtattggtccatgcac 54803202  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  54803203 tttgtaaaaatattgatatt 54803222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 16732000 - 16732106
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||| ||         ||||||| ||||||||||||||| |||||||||||| |||||    
T  16732000 ctgcactttgtaaaaatattggtattgatccctctattaactttctattaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaatat 16732099  T
Q  321 tggtatt 327  Q
    |||||||    
T  16732100 tggtatt 16732106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 327
Target Start/End: Original strand, 51753975 - 51754084
Alignment:
Q  220 ccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||  |||| ||||||| ||    
T  51753975 ccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaagaacacaaaactattggtattggtctctgcattttgtaaaaa 51754074  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  51754075 tattggtatt 51754084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 27957792 - 27957687
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatatt 321  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||||||| | | ||||    
T  27957792 tgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgttaaactatt 27957693  T
Q  322 ggtatt 327  Q
    ||||||    
T  27957692 ggtatt 27957687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 54803338 - 54803287
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  54803338 tccctgcactttgtaaaaatattggtattggtctctctgttaactttctgtt 54803287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 16222543 - 16222665
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn----cacaaaattattggtattggtccttg 304  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||            ||||||| ||||| |||| |||| ||    
T  16222543 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaatacacaaaactattgatattagtccctg 16222642  T
Q  305 cactttgtaagaatattggtatt 327  Q
    |||||||||| ||||||||||||    
T  16222643 cactttgtaaaaatattggtatt 16222665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 11692492 - 11692441
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  11692492 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 11692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 27957539 - 27957590
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  27957539 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 27957590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 29016029 - 29015978
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  29016029 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 29015978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 34682360 - 34682411
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  34682360 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 34682411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 38443396 - 38443447
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  38443396 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 38443447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 40036715 - 40036831
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  |||||||| ||| |||||||||||||||||||| |||| |||||||||||||        |||  || ||||||||||||| | ||||||    
T  40036715 ttggaattggtccctgcactttataaaaatattggtattggtccctctcttaactttctgttaaaaaaaacac--aactattggtattggttcctgcact 40036812  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| |||||| |||||    
T  40036813 ttgtaaaaatattagtatt 40036831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47358229 - 47358280
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  47358229 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 47358280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 51437077 - 51437128
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  51437077 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 51437128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 51437300 - 51437193
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcactttgtaagaata 319  Q
    |||||| |||||||||||||||||||| ||| |||| | |||||||||||         ||||||| ||||||||||||||| |||||||||||| ||||    
T  51437300 cctgcactttgtaaaaatattggtattagtccctctgtgaactttctgttaagaaaaaacacaaaactattggtattggtccctgcactttgtaaaaata 51437201  T
Q  320 ttggtatt 327  Q
    ||| ||||    
T  51437200 ttgatatt 51437193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 51754231 - 51754180
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  51754231 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 51754180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 21560877 - 21560927
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgt 269  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  21560877 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgt 21560927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 47982658 - 47982557
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattg 322  Q
    |||| |||||||||||||||||||||||| |||||||||||||   |         ||||||| |||||||||||||||||| ||||||||| |||||||    
T  47982658 tgcactttgtaaaaatattggtattggtccctctattaacttt---taaaaaaaaacacaaaactattggtattggtccttgtactttgtaaaaatattg 47982562  T
Q  323 gtatt 327  Q
     ||||    
T  47982561 atatt 47982557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 47991945 - 47991844
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattg 322  Q
    |||| |||||||||||||||||||||||| |||||||||||||   |         ||||||| |||||||||||||||||| ||||||||| |||||||    
T  47991945 tgcactttgtaaaaatattggtattggtccctctattaacttt---taaaaaaaaacacaaaactattggtattggtccttgtactttgtaaaaatattg 47991849  T
Q  323 gtatt 327  Q
     ||||    
T  47991848 atatt 47991844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 48001232 - 48001131
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattg 322  Q
    |||| |||||||||||||||||||||||| |||||||||||||   |         ||||||| |||||||||||||||||| ||||||||| |||||||    
T  48001232 tgcactttgtaaaaatattggtattggtccctctattaacttt---taaaaaaaaacacaaaactattggtattggtccttgtactttgtaaaaatattg 48001136  T
Q  323 gtatt 327  Q
     ||||    
T  48001135 atatt 48001131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 3017502 - 3017453
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  3017502 cctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 3017453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 26920661 - 26920765
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgc-actttgtaagaatatt 321  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||         |||||| ||||||||||||||| ||| ||||||||| ||||||    
T  26920661 tgcactttgtaaaaatattggtattggttcctctgttaactttctgttaaaaaaat-acaaaactattggtattggtccctgcaactttgtaaaaatatt 26920759  T
Q  322 ggtatt 327  Q
    ||||||    
T  26920760 ggtatt 26920765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 26920751 - 26920796
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  26920751 aaaaatattggtattggtccttgcactttgtaaaaatattggtatt 26920796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 44398018 - 44398067
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtattagtc 331  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  44398018 aaaaatattggtattggtccctgcactttgtaaaaatattggtattagtc 44398067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 44398210 - 44398162
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  44398210 tccctgcactttgtaaaaatattggtattggtccctctgttaactttct 44398162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 55328770 - 55328722
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  55328770 ctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 55328722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 19987914 - 19988026
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn----cacaaaattattggtattggtccttgcactttgtaa 314  Q
    |||||||| ||||||||||||||| |||||||| |||| |||||||||||||            ||||||| |||||||||| |||| ||||||||||||    
T  19987914 tccctgcactttgtaaaaatattgatattggtccctctgttaactttctgttaaaaaaaaaaaacacaaaactattggtattagtccctgcactttgtaa 19988013  T
Q  315 gaatattggtatt 327  Q
     |||||| |||||    
T  19988014 aaatattagtatt 19988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 35565120 - 35565171
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  35565120 tccctgcactttgtaaaaatattggtattggtccctctgttaactttttgtt 35565171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 35565261 - 35565312
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  35565261 tccctgcactttgtaaaaatattggtattggtccctctgttaactttttgtt 35565312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 40036978 - 40036927
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  40036978 tccctacactttgtaaaaatattggtattggtccctctgttaactttctgtt 40036927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 40791141 - 40791090
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||| |||||||||||||||||||| |||| |||||||||||||    
T  40791141 tccctgcactttataaaaatattggtattggtccctctgttaactttctgtt 40791090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47982441 - 47982492
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  47982441 tccctacactttgtaaaaatattggtattggtccctctgttaactttctgtt 47982492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 47991728 - 47991779
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  47991728 tccctacactttgtaaaaatattggtattggtccctctgttaactttctgtt 47991779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 48001015 - 48001066
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  48001015 tccctacactttgtaaaaatattggtattggtccctctgttaactttctgtt 48001066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 48010302 - 48010353
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| |||||||||||||    
T  48010302 tccctacactttgtaaaaatattggtattggtccctctgttaactttctgtt 48010353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 26050567 - 26050617
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgt 269  Q
    ||||| || |||||||||||||||||||||||| |||| ||||||||||||    
T  26050567 tcccttcactttgtaaaaatattggtattggtccctctgttaactttctgt 26050617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 29352474 - 29352512
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  29352474 ttggtattggtccttgcactttgtaaaaatattggtatt 29352512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 48010519 - 48010477
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaacttt 265  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  48010519 tgcactttgtaaaaatattggtattggtccctctattaacttt 48010477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 35565249 - 35565289
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  35565249 tattggtattggtccctgcactttgtaaaaatattggtatt 35565289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 40393542 - 40393589
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  40393542 ctgcactttgtaaaaatattggtattggtc-ctctgttaactttctgtt 40393589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 21441271 - 21441220
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||| ||| |||| |||||||||||||    
T  21441271 tccctacactttgtaaaaatattggtatttgtccctctgttaactttctgtt 21441220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 26920913 - 26920862
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||||||| ||||| |||||||||||||| |||| |||| ||||||||    
T  26920913 tccctgcattttataaaactattggtattggtccctctgttaattttctgtt 26920862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 29352488 - 29352535
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  29352488 tgcactttgtaaaaatattggtattggtccctctgttaactttatgtt 29352535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 49665408 - 49665459
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||| ||||    
T  49665408 tccctgcactttgtaaaaatattggtattggtccatctgttaactttatgtt 49665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 51760869 - 51760920
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| ||  ||| |||||||||||||    
T  51760869 tccctgcactttgtaaaaatattggtattgatccatctgttaactttctgtt 51760920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 52836679 - 52836730
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||| |||||||||||| |||| |||||||| ||||    
T  52836679 tccctgcactttgtaaaaatgttggtattggtccctctgttaactttttgtt 52836730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 16222802 - 16222760
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  16222802 tttgaaaaaatattggtattggtccctctgttaactttctgtt 16222760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 23461010 - 23461052
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    ||||||||  |||||||| ||||||||||||||||||||||||    
T  23461010 ttggaattggtccctgcactttgtaaaaatattggtattggtc 23461052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 31705272 - 31705314
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    ||||||||  |||||||| ||||||||||||||||||||||||    
T  31705272 ttggaattggtccctgcactttgtaaaaatattggtattggtc 31705314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 44397994 - 44398036
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    ||||||||  |||||||| ||||||||||||||||||||||||    
T  44397994 ttggaattggtccctgcactttgtaaaaatattggtattggtc 44398036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 11692330 - 11692375
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  11692330 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 11692375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 16222632 - 16222669
Alignment:
Q  214 attaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  16222632 attagtccctgcactttgtaaaaatattggtattggtc 16222669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 16222651 - 16222696
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  16222651 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 16222696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 16732092 - 16732137
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  16732092 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 16732137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 23461034 - 23461079
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  23461034 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 23461079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 29352666 - 29352621
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctct 254  Q
    ||||||||  || ||||| |||||||||||||||||||||||||||    
T  29352666 ttggaattggtctctgcactttgtaaaaatattggtattggtctct 29352621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 31705296 - 31705341
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  31705296 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 31705341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 34682519 - 34682474
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  34682519 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 34682474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 40036817 - 40036862
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| |||| |||||||||| |||||||||||| ||||||||||||    
T  40036817 aaaaatattagtattggtccctgcactttgtaaaaatattggtatt 40036862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 40393702 - 40393657
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  40393702 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 40393657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 40790981 - 40791026
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  40790981 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 40791026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 44638482 - 44638527
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  44638482 ttggaattggtccatgcactttgtaaaaatattggtattggtctct 44638527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 47358394 - 47358349
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  47358394 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 47358349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 251
Target Start/End: Original strand, 51754059 - 51754088
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtc 251  Q
    ||||||||||||||||||||||||||||||    
T  51754059 ctgcattttgtaaaaatattggtattggtc 51754088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 51754070 - 51754115
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  51754070 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 51754115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 51761007 - 51760962
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  51761007 aaaaatattggtattggtccatgcactttgtaaaaatattgatatt 51760962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 54803348 - 54803303
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  54803348 ttggcattggtccctgcactttgtaaaaatattggtattggtctct 54803303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 55328612 - 55328657
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  55328612 aaaaatattggtattggtccatgcactttgtaaaaatattgatatt 55328657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 3017331 - 3017363
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  3017331 tccctgcactttgtaaaaatattggtattggtc 3017363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 11692316 - 11692348
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  11692316 tccctgcactttgtaaaaatattggtattggtc 11692348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 16732078 - 16732110
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  16732078 tccctgcactttgtaaaaatattggtattggtc 16732110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 27957696 - 27957656
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||| |||||||||||| ||||||| ||||    
T  27957696 tattggtattggtccctgcactttgtaaaaatattgatatt 27957656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 31705437 - 31705405
Alignment:
Q  238 tattggtattggtctctctattaactttctgtt 270  Q
    ||||||||||||||||||| |||||||||||||    
T  31705437 tattggtattggtctctctgttaactttctgtt 31705405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 34682533 - 34682501
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  34682533 tccctgcactttgtaaaaatattggtattggtc 34682501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 48010466 - 48010418
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||| |||| ||||||||| ||||||| ||||    
T  48010466 cacaaaactattggtattggttcttgtactttgtaaaaatattgatatt 48010418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 54089919 - 54089971
Alignment:
Q  219 tccctgcattttgt-aaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||| ||||||||||||||||||| |||| |||||||| ||||    
T  54089919 tccctgcactttgttaaaaatattggtattggtccctctgttaactttttgtt 54089971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 16905 - 17024
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| |||||||||| |||| |||||    
T  16905 ttggaattgatccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtatttgtccctgcac 17004  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  17005 tttgtaaaaatattggtatt 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 17175 - 17138
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtattagtc 331  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  17175 attggtccctgcactttgtaaaaatattggtattagtc 17138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 16996 - 17028
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  16996 tccctgcactttgtaaaaatattggtattggtc 17028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 91)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 331
Target Start/End: Complemental strand, 33850798 - 33850675
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| || ||    
T  33850798 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgaac 33850699  T
Q  308 tttgtaagaatattggtattagtc 331  Q
    ||||||| ||||||||||||||||    
T  33850698 tttgtaaaaatattggtattagtc 33850675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 331
Target Start/End: Complemental strand, 970772 - 970659
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| || ||||||||| ||    
T  970772 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgaactttgtaaaaa 970673  T
Q  318 tattggtattagtc 331  Q
    ||||||||||||||    
T  970672 tattggtattagtc 970659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 18707867 - 18707747
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  18707867 ttggaattgatccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 18707768  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  18707767 ctttgtaaaaatattggtatt 18707747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 32504049 - 32504169
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  32504049 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 32504148  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  32504149 ctttgtaaaaatattggtatt 32504169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 4831195 - 4831305
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||||||||||||||| ||| |||||||||||| |    
T  4831195 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaacaaaaaaacacaaaattattggtattgatccctgcactttgtaaaa 4831294  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  4831295 atattggtatt 4831305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 14102641 - 14102762
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||           ||||||||| ||||||||||||| |||    
T  14102641 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaaacacaaaattgttggtattggtccctgc 14102740  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  14102741 actttgtaaaaatattggtatt 14102762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 32653883 - 32654004
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||           ||||||||| ||||||||||||| |||    
T  32653883 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaaacacaaaattgttggtattggtccctgc 32653982  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  32653983 actttgtaaaaatattggtatt 32654004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 32928058 - 32927937
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||           ||||||||| ||||||||||||| |||    
T  32928058 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaaacacaaaattgttggtattggtccctgc 32927959  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  32927958 actttgtaaaaatattggtatt 32927937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 45003075 - 45002968
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaata 319  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||         ||||||| ||||||||||||||| |||||||||||| ||||    
T  45003075 cctgcactttgtaaaaatattggtattggtctctctattaactttctattaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaata 45002976  T
Q  320 ttggtatt 327  Q
    ||| ||||    
T  45002975 ttgatatt 45002968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 4902942 - 4902822
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| ||||||||||||| |||||||||| |||| |||||||||||||          ||||||| ||||||||||||||| ||||    
T  4902942 ttggaattggtccctgcactttgtaaaaatatcggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 4902843  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  4902842 ctttgtaaaaatattggtatt 4902822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 2098375 - 2098481
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||          ||||||| ||||||||||||||| |||||||||||| |||||    
T  2098375 tgcactttgtaaaaatattggtattgatctctctattaactttctcttaaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaatat 2098474  T
Q  321 tggtatt 327  Q
    |||||||    
T  2098475 tggtatt 2098481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 3952248 - 3952137
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgcactttgtaag 315  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||           || |||| ||||||||||||||| ||||||||||||     
T  3952248 tccctgcactttgtaaaaatattggtattgatccctctattaactttctgttaaaaaaaaaaacagaaaactattggtattggtccctgcactttgtaaa 3952149  T
Q  316 aatattggtatt 327  Q
    ||||||||||||    
T  3952148 aatattggtatt 3952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 11108741 - 11108632
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||         ||||||| |||||||||| |||| |||||||||||| ||    
T  11108741 tccctgcactttgtaaaaatattggtattggtccctctcttaactttctgttaaaaaaaaacacaaaactattggtattagtccctgcactttgtaaaaa 11108642  T
Q  318 tattggtatt 327  Q
    |||| |||||    
T  11108641 tattagtatt 11108632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 18906993 - 18907113
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||||| || |||||||||||||||||||||||| |||| |||||||||||||          ||||||| ||||||||||||||| ||||    
T  18906993 ttggaattggtccctacactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 18907092  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| | ||||||||||    
T  18907093 ctttgtaaaattattggtatt 18907113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 39060475 - 39060592
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||| |||| |||||||| |||||||||||||||  ||| |||||||||||||        ||||||| ||||||||||||||| ||||||    
T  39060475 ttggaattggtccatgcactttgtaaacatattggtattggtccatctgttaactttctgttaaaaaaa-cacaaaactattggtattggtccctgcact 39060573  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  39060574 ttgtaaaaatattggtatt 39060592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 14827577 - 14827685
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||||| ||||||||| |||| ||||||||| | ||||||||||||||||        ||||||| ||||||||||| ||| |||||||||||| |||    
T  14827577 tccctgcactttgtaaaagtattagtattggtcccgctattaactttctgttaaaaaaaacacaaaactattggtattgctccctgcactttgtaaaaat 14827676  T
Q  319 attggtatt 327  Q
    ||| |||||    
T  14827677 attagtatt 14827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 41186328 - 41186435
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||| ||        ||||||| |||||||||| |||  |||||||||||| |||    
T  41186328 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctatt-aaaaaaacacaaaactattggtattagtctctgcactttgtaaaaat 41186426  T
Q  319 attggtatt 327  Q
    |||||||||    
T  41186427 attggtatt 41186435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 11278067 - 11278176
Alignment:
Q  212 gaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcactttg 311  Q
    ||||| ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||         ||| || ||||| ||||||||| |||||||||    
T  11278067 gaattgatccctgcactttgtaaaaatattgatattgatccctctattaactttctgttaaaaaaataacacaactattgatattggtccctgcactttg 11278166  T
Q  312 taagaatatt 321  Q
    ||| ||||||    
T  11278167 taaaaatatt 11278176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 42813945 - 42814065
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaat--tattggtattggtccttgca 306  Q
    ||||||||  |||| ||| |||||||||||||||||||||||| ||||||||||||||||||         | ||||   ||||||||||||||| ||||    
T  42813945 ttggaattggtcccagcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaaaaaaaactattggtattggtccctgca 42814044  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||| ||||||    
T  42814045 ctttgtaaaaatataggtatt 42814065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 5674326 - 5674218
Alignment:
Q  220 ccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    ||||||| |||||||||||||||| || |||| |||  |||||||||||||         ||||||| ||||||||||||||| |||||||||||| |||    
T  5674326 ccctgcactttgtaaaaatattggcatcggtccctccgttaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaaat 5674227  T
Q  319 attggtatt 327  Q
    |||||||||    
T  5674226 attggtatt 5674218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 32504316 - 32504264
Alignment:
Q  218 atccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  32504316 atccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 32504264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 2098628 - 2098577
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  2098628 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 2098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 14102908 - 14102857
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  14102908 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 14102857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 18478627 - 18478576
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  18478627 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 18478576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 18707603 - 18707654
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  18707603 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 18707654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 25251527 - 25251578
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  25251527 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 25251578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 28625799 - 28625748
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  28625799 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 28625748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 32927760 - 32927811
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  32927760 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 32927811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 34826018 - 34825967
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  34826018 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 34825967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 42814290 - 42814239
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  42814290 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 42814239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 9777316 - 9777195
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| ||||||||||||||||||||| || ||||||||| ||| ||||          ||||||| ||||||||||||||| ||||    
T  9777316 ttggaattggtccctgcactttgtaaaaatattggtattgctccctctattaattttatgttaaaaaaaaaacacaaaactattggtattggtccctgca 9777217  T
Q  307 ctttgt-aagaatattggtatt 327  Q
    |||||| || ||||||||||||    
T  9777216 ctttgtaaaaaatattggtatt 9777195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 430641 - 430762
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt----nnnnnnnncacaaaattattggtattggtccttg 304  Q
    ||||||||  |||||||| ||||||||| ||||||||||||||||||| || ||||||||||            ||||||| ||||||||||||||| ||    
T  430641 ttggaattggtccctgcactttgtaaaa-tattggtattggtctctctcttgactttctgttaaaaaaaaaaaacacaaaactattggtattggtccctg 430739  T
Q  305 cactttgtaagaatattggtatt 327  Q
    |||||||||| ||||||| ||||    
T  430740 cactttgtaaaaatattgatatt 430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 3963356 - 3963247
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| ||||||||||||||||||||| || |||| ||||| |||||||         ||||||| ||||||||||| ||| |||||||||||| ||    
T  3963356 tccctgcactttgtaaaaatattggtattgatccctctgttaaccttctgttaaaaaaaaacacaaaactattggtattgatccctgcactttgtaaaaa 3963257  T
Q  318 tattggtatt 327  Q
    ||||| ||||    
T  3963256 tattgatatt 3963247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 7900340 - 7900450
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt----nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||| |||||||||||||||||||||||| |||| |||| ||||||||            ||||||| |||||||||| |||| |||||||||||| |    
T  7900340 cctgcactttgtaaaaatattggtattggtccctctgttaattttctgttaaaaaaaaaaaacacaaaactattggtattagtccatgcactttgtaaaa 7900439  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  7900440 atattggtatt 7900450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 18907256 - 18907207
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  18907256 cctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 18907207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 25263691 - 25263630
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  25263691 ttggaattggtccatgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 25263630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 970516 - 970564
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  970516 tccctgcactttgtaaaaatattggtattggtccctctgttaactttct 970564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 33850532 - 33850580
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  33850532 tccctgcactttgtaaaaatattggtattggtccctctgttaactttct 33850580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 430849 - 430802
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  430849 tgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 430802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 4831452 - 4831401
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||| ||||||||| |||| |||||||||||||    
T  4831452 tccctgcactttgtaaaaatattagtattggtccctctgttaactttctgtt 4831401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 4902701 - 4902752
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||| |||||||| |||| |||||||||||||    
T  4902701 tccctgcactttgtaaaaatattgttattggtccctctgttaactttctgtt 4902752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 4950099 - 4950150
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||| |||||||| |||| |||||||||||||    
T  4950099 tccctgcactttgtaaaaatattgttattggtccctctgttaactttctgtt 4950150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 8031353 - 8031302
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  8031353 tccctgtactttgtaaaaatattggtattggtccctctgttaactttctgtt 8031302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 11108486 - 11108537
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||  ||||||||||||||||||    
T  11108486 tccctgtactttgtaaaaatattggtattggttcctctattaactttctgtt 11108537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 11278298 - 11278247
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  11278298 tccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 11278247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 14827830 - 14827779
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  14827830 tccctgcactttgtaaaaatattggtattggttcctctgttaactttctgtt 14827779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 25251772 - 25251725
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  25251772 tgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 25251725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 32654151 - 32654100
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  32654151 tccctgcactttgtaaaaatattggtattggtccctctgttaactttttgtt 32654100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 40691614 - 40691567
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  40691614 tgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 40691567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 41186579 - 41186528
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  41186579 tccctgtactttgtaaaaatattggtattggtccctctgttaactttctgtt 41186528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 42434756 - 42434807
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  42434756 tccctgcactttgtaaaaatattggtattggtccctctgttaattttctgtt 42434807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 8031153 - 8031261
Alignment:
Q  221 cctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaat 318  Q
    |||||| |||||||||||||||||||| ||| |||| | |||||||||||          ||||||| ||||||||||||||| ||| |||||||| |||    
T  8031153 cctgcactttgtaaaaatattggtattagtccctctgtgaactttctgttaagaaaaaaacacaaaactattggtattggtccctgcgctttgtaaaaat 8031252  T
Q  319 attggtatt 327  Q
    |||| ||||    
T  8031253 attgatatt 8031261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 18907099 - 18907144
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||    
T  18907099 aaaattattggtattggtccctgcactttgtaaaactattggtatt 18907144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 32927951 - 32927906
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  32927951 aaaaatattggtattggtccctgcactttgtaaaaatattggtatt 32927906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 34825751 - 34825873
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn----cacaaaattattggtattggtccttg 304  Q
    ||||||||  ||||| || ||| |||||||||||||||||||| |||| |||||||||||||            ||||| | ||||||||||||||| ||    
T  34825751 ttggaattggtccctacactttataaaaatattggtattggtccctctgttaactttctgttaaaaaaaaaaaacacaacactattggtattggtccctg 34825850  T
Q  305 cactttgtaagaatattggtatt 327  Q
    |||||||||| | ||||||||||    
T  34825851 cactttgtaaaattattggtatt 34825873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 3963132 - 3963180
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    |||||||| |||||||||||||||||||||||| ||||  |||||||||    
T  3963132 tccctgcactttgtaaaaatattggtattggtccctctgctaactttct 3963180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 28625605 - 28625653
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  28625605 cacaaaactattggtattggtccctgcactttgtacaaatattggtatt 28625653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 2098361 - 2098399
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  2098361 ttggtattggtccatgcactttgtaaaaatattggtatt 2098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 3952151 - 3952109
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggt 324  Q
    |||| ||||||||||||||| |||||||||||| |||||||||    
T  3952151 aaaaatattggtattggtccctgcactttgtaaaaatattggt 3952109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 4831267 - 4831309
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||    
T  4831267 ttggtattgatccctgcactttgtaaaaatattggtattggtc 4831309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 34826028 - 34825990
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  34826028 ttggtattggtccctgcactttgtaaaaatattggtatt 34825990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 42434993 - 42434931
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaa-tattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||| || | |||||||| |||||||||||||| |||| |||||||||||||    
T  42434993 ttggaattgatccctacactatgtaaaaaatattggtattggtccctctgttaactttctgtt 42434931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 430858 - 430825
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||||||||| ||||||||||||    
T  430858 attggtccttgcactttgtaaaaatattggtatt 430825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 2098467 - 2098512
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  2098467 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 2098512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 4831291 - 4831336
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  4831291 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 4831336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 4902836 - 4902791
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  4902836 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 4902791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 4950234 - 4950189
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  4950234 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 4950189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 7900436 - 7900481
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  7900436 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 7900481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 14102748 - 14102793
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  14102748 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 14102793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 18478445 - 18478486
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggt 250  Q
    ||||||||  |||||||| |||||||||||||||||||||||    
T  18478445 ttggaattggtccctgcactttgtaaaaatattggtattggt 18478486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 18478469 - 18478514
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||| | |||||||||||| ||||||||||||    
T  18478469 aaaaatattggtattggttcctgcactttgtaaaaatattggtatt 18478514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 18707761 - 18707716
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  18707761 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 18707716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 25251687 - 25251642
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  25251687 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 25251642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 25263592 - 25263547
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  25263592 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 25263547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 32504155 - 32504200
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  32504155 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 32504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 32653990 - 32654035
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  32653990 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 32654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 32927920 - 32927875
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  32927920 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 32927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 34825859 - 34825904
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| | |||||||||| | ||||||||||    
T  34825859 aaaattattggtattggtccctacactttgtaaaactattggtatt 34825904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 2098453 - 2098485
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  2098453 tccctgcactttgtaaaaatattggtattggtc 2098485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 3952001 - 3952049
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  3952001 ctgcactttgtaaaaatattagtattggtccatctgttaactttctgtt 3952049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 3952165 - 3952133
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  3952165 tccctgcactttgtaaaaatattggtattggtc 3952133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 4902850 - 4902818
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  4902850 tccctgcactttgtaaaaatattggtattggtc 4902818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 5674246 - 5674214
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  5674246 tccctgcactttgtaaaaatattggtattggtc 5674214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 14102734 - 14102766
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  14102734 tccctgcactttgtaaaaatattggtattggtc 14102766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 18707775 - 18707743
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  18707775 tccctgcactttgtaaaaatattggtattggtc 18707743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 28625644 - 28625684
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||| |||||||||||| ||||||| ||||    
T  28625644 tattggtattggtccctgcactttgtaaaaatattgatatt 28625684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 32504141 - 32504173
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  32504141 tccctgcactttgtaaaaatattggtattggtc 32504173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 32653976 - 32654008
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  32653976 tccctgcactttgtaaaaatattggtattggtc 32654008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 32927934 - 32927902
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  32927934 tccctgcactttgtaaaaatattggtattggtc 32927902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 32927965 - 32927933
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  32927965 tccctgcactttgtaaaaatattggtattggtc 32927933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 42434911 - 42434871
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  42434911 tattggtattggtcactgcactttgtaaaaatattggtatt 42434871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 7230038 - 7230156
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    |||||||| ||||||||||||||||||||||||| |||||||| |||| |||||||| ||||        ||||||| |||||||||| |||| ||||||    
T  7230038 ttggaattgatccctgcattttgtaaaaatattgatattggtccctctgttaactttttgttaaaaaaaacacaaaactattggtattagtccctgcact 7230137  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  7230138 ttgtaaaaatattggtatt 7230156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 10837502 - 10837391
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgcactttgtaag 315  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||| ||||||||||||     
T  10837502 tccctgcactttgtaaaaatattggtattggtctctctattaactttctgttacaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaa 10837403  T
Q  316 aatattggtatt 327  Q
    ||||||||||||    
T  10837402 aatattggtatt 10837391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 17696944 - 17696824
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  || ||||| |||||||||||||| ||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||    
T  17696944 ttggaattggtcactgcactttgtaaaaatattagtattggtctctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccttgca 17696845  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||| ||| ||||||||||||    
T  17696844 ctttataaaaatattggtatt 17696824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 30795122 - 30795002
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  30795122 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 30795023  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  30795022 ctttgtaaaaatattggtatt 30795002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 32539119 - 32538999
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| || |    
T  32539119 ttggaattgatccatgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgta 32539020  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  32539019 ctttgtaaaaatattggtatt 32538999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 9855650 - 9855531
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    |||||||| |||||| || |||||||||||||||||||||||| |||| |||||||||||||         ||||||| |||||||||| |||| |||||    
T  9855650 ttggaattgatccctacactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattggtatttgtccctgcac 9855551  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  9855550 tttgtaaaaatattggtatt 9855531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 335
Target Start/End: Complemental strand, 43857799 - 43857668
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-----nnnnnnnncacaaaattattggtattggtcctt 303  Q
    ||||||||  |||||||| |||||||||||||| ||||||||| ||||||||||||||||||             ||||||| ||||||||||||||| |    
T  43857799 ttggaattggtccctgcactttgtaaaaatattagtattggtccctctattaactttctgttaaaaaaaaaaaaacacaaaactattggtattggtccct 43857700  T
Q  304 gcactttgtaagaatattggtattagtctctg 335  Q
    ||||||||||| |||||||||||| |||||||    
T  43857699 gcactttgtaaaaatattggtattggtctctg 43857668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 2057057 - 2056947
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| || ||||||||| |    
T  2057057 tccctgtactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgtactttgtaaaa 2056958  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  2056957 atattggtatt 2056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 37405941 - 37406061
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||||| |||    
T  37405941 ttggaattggtccttgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtcc-tgc 37406039  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  37406040 actttgtaaaaatattggtatt 37406061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 7050548 - 7050661
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-----nnnnnnnncacaaaattattggtattggtccttgcactttgta 313  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||             ||||||| ||||||||||||||| |||||||||||    
T  7050548 tccctgcactttgtaaaaatattggtattggtccctctattaactttctttttaaaaaaaaaaaacacaaaactattggtattggtccctgcactttgta 7050647  T
Q  314 agaatattggtatt 327  Q
    | ||||||||||||    
T  7050648 aaaatattggtatt 7050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 42216343 - 42216443
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattggtat 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||| ||||||||| |||| ||||||| |||||||||||    
T  42216343 tttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattgatattggtccctgcattttgtaaaaatattggtat 42216442  T
Q  327 t 327  Q
    |    
T  42216443 t 42216443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 10496034 - 10495916
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||          |||||| ||||||||||||||| |||||    
T  10496034 ttggaattgttccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaatacaaaactattggtattggtcc-tgcac 10495936  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  10495935 tttgtaaaaatattgatatt 10495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 7050633 - 7050746
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-----nnnnnnnncacaaaattattggtattggtccttgcactttgta 313  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||| ||             ||||||| ||||||||||||||| |||||||||||    
T  7050633 tccctgcactttgtaaaaatattggtattggtccctctattaactttctttttaaaaaaaaaaaacacaaaactattggtattggtccctgcactttgta 7050732  T
Q  314 agaatattggtatt 327  Q
    | ||||||| ||||    
T  7050733 aaaatattgatatt 7050746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 2705231 - 2705343
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||| |||| |||||||||||||||||||||||| |||| |||||||||| ||         ||||||| ||||||||||||||| |||||    
T  2705231 ttggaattggtccatgcactttgtaaaaatattggtattggtccctctgttaactttctattaaaaaaaaacacaaaactattggtattggtccctgcac 2705330  T
Q  308 tttgtaagaatat 320  Q
    ||||||| |||||    
T  2705331 tttgtaaaaatat 2705343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 42216587 - 42216539
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  42216587 ctgcactttgtaaaaatattggtattggtcactctattaactttctgtt 42216539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 2232782 - 2232833
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  2232782 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 2232833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 41441464 - 41441515
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  41441464 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 41441515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 34181223 - 34181281
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttct 267  Q
    ||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||||    
T  34181223 ttggaattggtccctgcactttgtaaaaatattggtattgatccctctattaactttct 34181281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 27697011 - 27696950
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| ||||||||||||||||||||||||  |||||||||||| ||||    
T  27697011 ttggaattggtccctgcactttgtaaaaatattggtattggtccatctattaactttatgtt 27696950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 32923792 - 32923853
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  32923792 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 32923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 4528948 - 4528897
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||| ||||||||| |||| |||||||||||||    
T  4528948 tccctgcactttgtaaaaatattagtattggtccctctgttaactttctgtt 4528897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 7050859 - 7050808
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  7050859 tccctgaactttgtaaaaatattggtattggtccctctgttaactttctgtt 7050808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 7230302 - 7230251
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||| | ||||||||||||||||||||| ||||||| |||||||||||||    
T  7230302 tccctgtactttgtaaaaatattggtattgatctctctgttaactttctgtt 7230251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 7678343 - 7678462
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcac 307  Q
    ||||||||  || ||||| |||||||||||||||| |||| || |||| ||||| |||||||         ||||||| ||||| |||||||||||||||    
T  7678343 ttggaattggtctctgcactttgtaaaaatattggcattgatccctctgttaaccttctgttaaaaaaaaacacaaaactattgatattggtccttgcac 7678442  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  7678443 tttgtaaaaatattgatatt 7678462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 10495801 - 10495852
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||| ||| |||| |||||||||||||    
T  10495801 tccctgcactttgtaaaaatattggtattagtccctctgttaactttctgtt 10495852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 10837244 - 10837295
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  10837244 tccctgcactttgtaaaaatattggtatcggtctctatgttaactttctgtt 10837295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 26695740 - 26695689
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| || | |||||||||||||    
T  26695740 tccctgcactttgtaaaaatattggtattggtccctttgttaactttctgtt 26695689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 37406202 - 37406155
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  37406202 tgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 37406155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 42686320 - 42686273
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  42686320 tgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 42686273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 26695477 - 26695594
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||| || ||||||||||||||||||| |||| |||| |||||||||||||         |||||| ||||| ||||||||| | ||||    
T  26695477 ttggaattggtccctacactttgtaaaaatattggtatcggtccctctgttaactttctgttaaaaaaag-acaaaactattgatattggtccctacact 26695575  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| | ||||||||||    
T  26695576 ttgtaaaattattggtatt 26695594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 327
Target Start/End: Original strand, 4528729 - 4528832
Alignment:
Q  228 tttgtaaaaata-ttggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatattgg 323  Q
    |||||||||||| |||||||||||| ||||||||||||||||||           ||||||| ||||||||||||||| ||||||| |||| |||||||     
T  4528729 tttgtaaaaataattggtattggtccctctattaactttctgttaaaaaaaataacacaaaactattggtattggtccctgcacttagtaaaaatattga 4528828  T
Q  324 tatt 327  Q
    ||||    
T  4528829 tatt 4528832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 26695580 - 26695625
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||    
T  26695580 aaaattattggtattggtccctgcactttgtaaaactattggtatt 26695625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 42216415 - 42216447
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||||||||||||||||||||||||||||    
T  42216415 tccctgcattttgtaaaaatattggtattggtc 42216447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 7678575 - 7678524
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||| |||||||| ||||  ||||||||||||    
T  7678575 tccctgcactttgtaaaaatattgatattggtccctctgctaactttctgtt 7678524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 27696779 - 27696826
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| | |||||||||||    
T  27696779 tgcactttgtaaaaatattggtattggtccctctgtcaactttctgtt 27696826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 7230118 - 7230160
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| |||| |||||||| ||||||||||||||||||||||||    
T  7230118 ttggtattagtccctgcactttgtaaaaatattggtattggtc 7230160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 9855395 - 9855437
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||||||||||||||||||| |||| ||| |||||||||    
T  9855395 tttgtaaaaatattggtattggtccctctgttagctttctgtt 9855437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 10495791 - 10495833
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtc 331  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  10495791 ttggcattggtccctgcactttgtaaaaatattggtattagtc 10495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 26695750 - 26695712
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  26695750 ttggtattggtccctgcactttgtaaaaatattggtatt 26695712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 37406216 - 37406178
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  37406216 ttggcattggtccttgcactttgtaaaaatattggtatt 37406178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 7230142 - 7230187
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  7230142 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 7230187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 9855545 - 9855500
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  9855545 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 9855500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 10837405 - 10837360
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  10837405 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 10837360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 32539013 - 32538968
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  32539013 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 32538968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 34181331 - 34181376
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  34181331 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 34181376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 37406047 - 37406092
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  37406047 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 37406092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 42216429 - 42216474
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  42216429 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 42216474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 2232943 - 2232895
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtattagt 330  Q
    |||| ||||| ||||||||| |||||||||||| ||||||| |||||||    
T  2232943 aaaaatattgatattggtccctgcactttgtaaaaatattgatattagt 2232895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 9855559 - 9855527
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  9855559 tccctgcactttgtaaaaatattggtattggtc 9855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 10837419 - 10837387
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  10837419 tccctgcactttgtaaaaatattggtattggtc 10837387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 10837507 - 10837467
Alignment:
Q  294 attggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||||||| |||||||||||| |||||||||||| ||||||    
T  10837507 attggtccctgcactttgtaaaaatattggtattggtctct 10837467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 327
Target Start/End: Original strand, 27696771 - 27696803
Alignment:
Q  295 ttggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| ||||||||||||    
T  27696771 ttggtccttgcactttgtaaaaatattggtatt 27696803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 30795030 - 30794998
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  30795030 tccctgcactttgtaaaaatattggtattggtc 30794998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 32538856 - 32538904
Alignment:
Q  222 ctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| ||||||||||||||| |||||||| |||| |||||||| ||||    
T  32538856 ctgcactttgtaaaaatattgatattggtccctctgttaactttatgtt 32538904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 32923967 - 32923919
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| |||| |||||||||| |||||||||||| ||||||| ||||    
T  32923967 cacaaaactattagtattggtccctgcactttgtaaaaatattgatatt 32923919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 34181297 - 34181345
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| | ||||||||||||| || ||||||||| ||||||||||||    
T  34181297 cacaaaacttttggtattggtccctgtactttgtaaaaatattggtatt 34181345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 1253 - 1363
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| |||||||||||| |    
T  1253 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaa 1352  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  1353 atattggtatt 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 1335 - 1367
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  1335 tccctgcactttgtaaaaatattggtattggtc 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 56; Significance: 4e-23; HSPs: 4)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 57458 - 57579
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||||||||||| |||    
T  57458 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccctgc 57557  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  57558 actttgtaaaaatattggtatt 57579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 57735 - 57679
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaacttt 265  Q
    |||| ||| ||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  57735 ttggcattgatccctgcactttgtaaaaatattggtattggtccctctgttaacttt 57679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 57565 - 57610
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  57565 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 57610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 57551 - 57583
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  57551 tccctgcactttgtaaaaatattggtattggtc 57583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 605784 - 605665
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctg-ttnnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||| ||        ||||||| ||||||||||||||| |||||    
T  605784 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtttaaaaaaaacacaaaactattggtattggtccctgcac 605685  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  605684 tttgtaaaaatattgatatt 605665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 16408807 - 16408926
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  16408807 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 16408906  T
Q  308 tttgtaagaatattggtatt 327  Q
     |||||| ||||||||||||    
T  16408907 cttgtaaaaatattggtatt 16408926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 33243515 - 33243395
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgt--tnnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||           ||||||| ||||||||||||||| ||||    
T  33243515 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgtaaaaaaaaaaacacaaaactattggtattggtccctgca 33243416  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  33243415 ctttgtaaaaatattggtatt 33243395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 327
Target Start/End: Original strand, 21905028 - 21905134
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaatat 320  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||          ||||||| ||||||||||||||| |||||||||||| |||||    
T  21905028 tgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaataaaacacaaaactattggtattggtccctgcactttgtaaaaatat 21905127  T
Q  321 tggtatt 327  Q
    |||||||    
T  21905128 tggtatt 21905134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 327
Target Start/End: Original strand, 21905106 - 21905216
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgcactttgtaaga 316  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||||||||          ||||||| ||||||||||||||| |||||||||||| |    
T  21905106 tccctgcactttgtaaaaatattggtattggtccctctattaattttctgttaaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaa 21905205  T
Q  317 atattggtatt 327  Q
    |||||||||||    
T  21905206 atattggtatt 21905216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 32218912 - 32219033
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt---nnnnnnnncacaaaattattggtattggtccttgc 305  Q
    ||||||||  |||||||| |||||||||||||||||| ||||| ||||||||||||||||||           ||||||| ||||||||||||||| |||    
T  32218912 ttggaattggtccctgcactttgtaaaaatattggtactggtccctctattaactttctgttaaaaaaaaaaacacaaaactattggtattggtccctgc 32219011  T
Q  306 actttgtaagaatattggtatt 327  Q
    ||||||||| ||||||||||||    
T  32219012 actttgtaaaaatattggtatt 32219033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 17204206 - 17204088
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||| || |||||||||||||||||||||||| |||| |||||||||||||        ||||||| ||| ||||||||||| ||||||    
T  17204206 ttggaattggtccctacactttgtaaaaatattggtattggtccctctgttaactttctgttgaaaaaaacacaaaactatcggtattggtccctgcact 17204107  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| | ||||||||||    
T  17204106 ttgtaaaattattggtatt 17204088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 12395997 - 12395888
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||         ||||||| ||||||||||| ||| |||||||||||| ||    
T  12395997 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattggtattgatccctgcactttgtaaaaa 12395898  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  12395897 tattggtatt 12395888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 335
Target Start/End: Original strand, 21002837 - 21002964
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    |||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||| |||          ||||||| ||||||||||||||| ||||    
T  21002837 ttggaattgatccatgcactttgtaaaaatattggtattggtccctctattaactttcagttaaaaaaaaaacacaaaactattggtattggtcc-tgca 21002935  T
Q  307 ctttgtaagaatattggtattagtctctg 335  Q
    ||||| || |||||||||||| |||||||    
T  21002936 ctttgaaaaaatattggtattggtctctg 21002964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 33360794 - 33360675
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcac 307  Q
    ||||||||  ||||| || ||||||||||||||||||||| || |||| |||||||||||||         ||||||| ||||||||||||||| |||||    
T  33360794 ttggaattggtccctacactttgtaaaaatattggtattgatccctctgttaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 33360695  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  33360694 tttgtaaaaatattggtatt 33360675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 583731 - 583851
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||| ||||           ||| || ||||||||||||||| ||||    
T  583731 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttatgttaaaaaaaaaaaacacaactattggtattggtccctgca 583830  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  583831 ctttgtaaaaatattggtatt 583851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 6535478 - 6535598
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||          || |||| ||||||||||||||| ||||    
T  6535478 ttggaattggtccctgcaatttgtaaaaatattggtattggtccctctgttaactttctgttaaaataaaaacaaaaaactattggtattggtccctgca 6535577  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||| ||||    
T  6535578 ctttgtaaaaatattgatatt 6535598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 9566388 - 9566268
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn--cacaaaattattggtattggtccttgca 306  Q
    ||||||||  ||| |||| ||||||||||||||| ||||| || ||||||||||||||||||          ||||||| ||||||||||||||| ||||    
T  9566388 ttggaatttgtccatgcactttgtaaaaatattgatattgatccctctattaactttctgttaaaaaaaaaacacaaaactattggtattggtccctgca 9566289  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  9566288 ctttgtaaaaatattggtatt 9566268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 22695930 - 22695810
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||| ||||||||| ||||||||||||||||||          ||||||| ||| ||||||||||| ||||    
T  22695930 ttggaattggtccctgcactttgtaaaaatatttgtattggtccctctattaactttctgttaaaaaaaaaacacaaaactataggtattggtccctgca 22695831  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| | ||||||||||    
T  22695830 ctttgtaaaattattggtatt 22695810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 16120480 - 16120531
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  16120480 tccctgcactttgtaaaaatattggtattggtctctctgttaactttctgtt 16120531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 5146887 - 5146947
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  5146887 ttggaattgatccc-gcactttgtaaaaatattggtattggtccctctattaactttctgtt 5146947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 10143557 - 10143496
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  10143557 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 10143496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 12395741 - 12395793
Alignment:
Q  218 atccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  12395741 atccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 12395793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 5997536 - 5997421
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||||||||| || || | ||||| |||||||         ||||||| ||||||||||||||| |||||    
T  5997536 ttggaattggtccctgcactttgtaaaaatattggtattgatccctttgttaaccttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 5997437  T
Q  308 tttgtaagaatattgg 323  Q
    ||||||| ||||||||    
T  5997436 tttgtaaaaatattgg 5997421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 6390257 - 6390138
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||||||||| || || | ||||| |||||||         ||||||| ||||||||||||||| |||||    
T  6390257 ttggaattggtccctgcactttgtaaaaatattggtattgatccctttgttaaccttctgttaaaaaacaacacaaaactattggtattggtccctgcac 6390158  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| || |||||||||    
T  6390157 tttgtaaaaaaattggtatt 6390138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 9566075 - 9566126
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  9566075 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 9566126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 14444936 - 14444885
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  14444936 tccctacactttgtaaaaatattggtattggtccctctattaactttctgtt 14444885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 33243248 - 33243299
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  33243248 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 33243299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 33878013 - 33877962
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  33878013 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 33877962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 2793376 - 2793259
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnncacaaaattattggtattggtccttgcact 308  Q
    ||||||||  ||||| || ||||||||||||||||||||| || |||||||||| |||||||         | |||| ||||||||||||||| || |||    
T  2793376 ttggaattggtccctacactttgtaaaaatattggtattgatccctctattaaccttctgttaaaaaaaaaataaaactattggtattggtcc-tgtact 2793278  T
Q  309 ttgtaagaatattggtatt 327  Q
    |||||| ||||||||||||    
T  2793277 ttgtaaaaatattggtatt 2793259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 584008 - 583947
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||| |||||||| |||||||||||||| ||||||||| |||| |||||||||||||    
T  584008 ttggcattagtccctgcactttgtaaaaatattagtattggtccctctgttaactttctgtt 583947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 14631075 - 14631014
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  14631075 ttggcattgatctctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 14631014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 21904934 - 21904995
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  || ||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  21904934 ttggaattggtctctgcactttgtaaaaatattggtattggtccctctattaattttctgtt 21904995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 22695824 - 22695779
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||    
T  22695824 aaaattattggtattggtccctgcactttgtaaaaatattggtatt 22695779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 6389991 - 6390042
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  6389991 tccctgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 6390042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 6535713 - 6535662
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| || | |||||||||||||    
T  6535713 tccctgcactttgtaaaaatattggtattggtccctttgttaactttctgtt 6535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 10143289 - 10143340
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  10143289 tccctgcactttgtaaaaatattggtattggttcctctgttaactttctgtt 10143340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 16409075 - 16409024
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  16409075 tccctgcactttgtaaaaatattggtattggttcctctgttaactttctgtt 16409024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 17203944 - 17203995
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  17203944 tccctgcactttgtaaaaatattggtattggtccctctgttaattttctgtt 17203995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 21905393 - 21905342
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  21905393 tccctgcactttgtaaaaatattggtattgatccctctgttaactttctgtt 21905342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 33360526 - 33360577
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  33360526 tccctgcactttgtaaaaatattggtattggtacctctgttaactttctgtt 33360577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 14440585 - 14440630
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||    
T  14440585 aaaattattggtattggtccctgcactttgtaaaactattggtatt 14440630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 33360689 - 33360644
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||    
T  33360689 aaaaatattggtattggtccctgcactttgtaaaaatattggtatt 33360644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 33705870 - 33705931
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| ||| ||| |||||    
T  33705870 ttggaattgttccctgcactttgtaaaaatattggtattggtccctctgttagcttcctgtt 33705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 583837 - 583885
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtattagt 330  Q
    |||| ||||||||||||||| |||||||||||| ||||||| |||||||    
T  583837 aaaaatattggtattggtccctgcactttgtaaaaatattgatattagt 583885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 14440559 - 14440599
Alignment:
Q  287 tattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  14440559 tattggtattggtccttgcactttgtaaaattattggtatt 14440599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 32219180 - 32219128
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggt-ctctctattaactttctgtt 270  Q
    |||||||| ||||||||||||||||||||||| | |||| |||||||||||||    
T  32219180 tccctgcactttgtaaaaatattggtattggtcccctctgttaactttctgtt 32219128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 605556 - 605607
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||| |||||||| |||||||| |||| |||||||||||||    
T  605556 tccctgcactttgtataaatattgatattggtccctctgttaactttctgtt 605607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 2793117 - 2793164
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  2793117 tgcactttgtaaaaatattggtattggtccctctgctaactttctgtt 2793164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 3199357 - 3199408
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||| ||| |||| |||||||||||||    
T  3199357 tccctacactttgtaaaaatattggtattagtccctctgttaactttctgtt 3199408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 5997272 - 5997323
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||| ||| ||||  ||||||||||||    
T  5997272 tccctgcactttgtaaaaatattggtattagtccctctgctaactttctgtt 5997323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 22695638 - 22695685
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||    
T  22695638 tgcactttgtaaaaatattggtattggttcctctgttaactttctgtt 22695685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 33706135 - 33706084
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||| || |||||||||||||||||||||||| |||| ||| |||||||||    
T  33706135 tccctacactttgtaaaaatattggtattggtccctctgttagctttctgtt 33706084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 2793103 - 2793141
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  2793103 ttggcattggtccttgcactttgtaaaaatattggtatt 2793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 5997262 - 5997304
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtc 331  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  5997262 ttggcattggtccctgcactttgtaaaaatattggtattagtc 5997304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 12395926 - 12395884
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||    
T  12395926 ttggtattgatccctgcactttgtaaaaatattggtattggtc 12395884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 14630883 - 14630925
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtc 251  Q
    ||||||||  |||||||| ||||||||||||||||||||||||    
T  14630883 ttggaattggtccctgcactttgtaaaaatattggtattggtc 14630925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 22695624 - 22695662
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  22695624 ttggcattggtccttgcactttgtaaaaatattggtatt 22695662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 32219190 - 32219152
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  32219190 ttggtattggtccctgcactttgtaaaaatattggtatt 32219152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 33360516 - 33360554
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  33360516 ttggtattggtccctgcactttgtaaaaatattggtatt 33360554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 2793273 - 2793228
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  2793273 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 2793228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 9566282 - 9566237
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  9566282 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 9566237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 14630907 - 14630952
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  14630907 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 14630952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 16120470 - 16120515
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtctct 334  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  16120470 ttggcattggtccctgcactttgtaaaaatattggtattggtctct 16120515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 16408912 - 16408957
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  16408912 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 16408957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 21905202 - 21905247
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  21905202 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 21905247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 32219019 - 32219064
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  32219019 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 32219064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 33243409 - 33243364
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  33243409 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 33243364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 33705976 - 33706021
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  33705976 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 33706021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 583823 - 583855
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  583823 tccctgcactttgtaaaaatattggtattggtc 583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 9566296 - 9566264
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  9566296 tccctgcactttgtaaaaatattggtattggtc 9566264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 10143483 - 10143435
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||||| | |||||||||| |||||| |||||    
T  10143483 cacaaaactattggtattggtccctacactttgtaaaaatattagtatt 10143435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 21905188 - 21905220
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  21905188 tccctgcactttgtaaaaatattggtattggtc 21905220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 32219005 - 32219037
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  32219005 tccctgcactttgtaaaaatattggtattggtc 32219037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 33243423 - 33243391
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  33243423 tccctgcactttgtaaaaatattggtattggtc 33243391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 33360672 - 33360640
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  33360672 tccctgcactttgtaaaaatattggtattggtc 33360640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 33360703 - 33360671
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  33360703 tccctgcactttgtaaaaatattggtattggtc 33360671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 33705962 - 33705994
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  33705962 tccctgcactttgtaaaaatattggtattggtc 33705994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 14459 - 14350
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcactttgtaagaa 317  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||         ||||||| ||||||||||||||| |||||||||||| |     
T  14459 tccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaag 14360  T
Q  318 tattggtatt 327  Q
    ||||||||||    
T  14359 tattggtatt 14350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 14204 - 14255
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  14204 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 14255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 14364 - 14319
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  14364 aaaagtattggtattggtccctgcactttgtaaaaatattgatatt 14319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 13036 - 13155
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||| ||||         ||||||| ||||||||||||||| |||||    
T  13036 ttggaattggtccctgcagtttgtaaaaatattggtattggtccctctcttaactttatgttaaaaaaaaacacaaaactattggtattggtccctgcac 13135  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||    
T  13136 tttgtaaaaatattggtatt 13155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 327
Target Start/End: Complemental strand, 9880 - 9760
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||||||           | |||| ||||||||||||||| ||||    
T  9880 ttggaattggtccctgcactttgtaaaaatattggtattggtccctctattaactttctgttaaaaaaaaaatagaaaactattggtattggtccctgca 9781  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  9780 ctttgtaaaaatattggtatt 9760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 9636 - 9687
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||| ||| |||| |||||||||||||    
T  9636 tccctgcactttgtaaaaatattggtattagtccctctgttaactttctgtt 9687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 9626 - 9668
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtattagtc 331  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  9626 ttggcattggtccctgcactttgtaaaaatattggtattagtc 9668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 9774 - 9729
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  9774 aaaaatattggtattggtccctgcactttgtaaaaatattgatatt 9729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 9788 - 9756
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtc 251  Q
    |||||||| ||||||||||||||||||||||||    
T  9788 tccctgcactttgtaaaaatattggtattggtc 9756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 50041 - 49937
Alignment:
Q  228 tttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn-cacaaaattattggtattggtccttgcactttgtaagaatattggtat 326  Q
    |||||||||||||||||||||||| |||| |||||||||||||         ||||||| ||||||||||||||| |||||||||||| | |||||||||    
T  50041 tttgtaaaaatattggtattggtccctctgttaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcactttgtaaaattattggtat 49942  T
Q  327 tagtc 331  Q
    |||||    
T  49941 tagtc 49937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 49795 - 49846
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  49795 tccctgcactttgtaaaaatattggtattggtccctctgttaaatttctgtt 49846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 49955 - 49907
Alignment:
Q  282 aaaattattggtattggtccttgcactttgtaagaatattggtattagt 330  Q
    ||||||||||||||| |||| |||||||||||| | |||||||||||||    
T  49955 aaaattattggtattagtccatgcactttgtaaaactattggtattagt 49907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 1335 - 1453
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||||||||         ||||||| ||||||||||||||| |||||    
T  1335 ttggaattggtccctgcactttgtaaaaatattggtattgatc-ctctattaactttctgttaaaaaaaaacacaaaactattggtattggtccctgcac 1433  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| ||||||| ||||    
T  1434 tttgtaaaaatattgatatt 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 1580 - 1519
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||| ||||||||| |||||||||||| || |||||||  |||| |||||||||||||    
T  1580 ttggcattgatccctgcactttgtaaaaataatgttattggttcctctgttaactttctgtt 1519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 58516 - 58635
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt-nnnnnnnncacaaaattattggtattggtccttgcac 307  Q
    ||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||||||          |||||| ||||||||||||||| |||||    
T  58516 ttggaattggtccctgcactttgtaaaaatattggtattggtccctcttttaactttctgttaaaaaaaaatacaaaactattggtattggtccctgcac 58615  T
Q  308 tttgtaagaatattggtatt 327  Q
    ||||||| |||||| |||||    
T  58616 tttgtaaaaatattagtatt 58635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 58753 - 58702
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  58753 tccctgcactttgtaaaaatattggtattggtccctctgttaactttttgtt 58702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 5578 - 5702
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgttnnnnnnnn------cacaaaattattggtattggtcct 302  Q
    ||||||||  |||||||| |||||||||||||||||||||||| || |||||||||||||||              ||||||| |||||||||||||||     
T  5578 ttggaattggtccctgcactttgtaaaaatattggtattggtccctgtattaactttctgttaaaaaaaaaaaaaacacaaaactattggtattggtccc 5677  T
Q  303 tgcactttgtaagaatattggtatt 327  Q
    |||||||||||| ||||||| ||||    
T  5678 tgcactttgtaaaaatattgatatt 5702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 5818 - 5767
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  5818 tccctgcactttgtaaaaatattggtattggtccctctgttaactttctgtt 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 35404 - 35524
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt--nnnnnnnncacaaaattattggtattggtccttgca 306  Q
    ||||||||  |||||||| |||||||||||||| |||||||||  |||||||||||||||||          ||||||| ||||||||||||||  || |    
T  35404 ttggaattggtccctgcactttgtaaaaatattagtattggtccatctattaactttctgttaaaaaaaaaacacaaaactattggtattggtctctgga 35503  T
Q  307 ctttgtaagaatattggtatt 327  Q
    |||||||| ||||||||||||    
T  35504 ctttgtaaaaatattggtatt 35524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 35673 - 35631
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctctattaa 261  Q
    |||||||| |||||||||||||||||||||||| |||| ||||    
T  35673 tccctgcactttgtaaaaatattggtattggtccctctgttaa 35631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 5337 - 5398
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  ||||| || |||||||||||||| ||||||||| |||| |||||||||||||    
T  5337 ttggaattggtccctacactttgtaaaaatattagtattggtccctctgttaactttctgtt 5398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 5368 - 5429
Alignment:
Q  209 ttggaattaatccctgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    ||||||||  ||||| || |||||||||||||| ||||||||| |||| |||||||||||||    
T  5368 ttggaattggtccctacactttgtaaaaatattagtattggtccctctgttaactttctgtt 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 8307 - 8259
Alignment:
Q  279 cacaaaattattggtattggtccttgcactttgtaagaatattggtatt 327  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  8307 cacaaaactattggtattggtccctgcactttgtaaaaatattgatatt 8259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 8146 - 8193
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  8146 tgcactttgtaaaaatattggtattggtccctctgttaactttttgtt 8193  T

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Target: scaffold0185; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 8132 - 8170
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  8132 ttggcattggtccttgcactttgtaaaaatattggtatt 8170  T

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Target: scaffold0421 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 3032 - 3079
Alignment:
Q  223 tgcattttgtaaaaatattggtattggtctctctattaactttctgtt 270  Q
    |||| ||||||||||||||||||||| || ||||||||||||| ||||    
T  3032 tgcactttgtaaaaatattggtattgatccctctattaactttatgtt 3079  T

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Target: scaffold0421; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 3018 - 3056
Alignment:
Q  289 ttggtattggtccttgcactttgtaagaatattggtatt 327  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  3018 ttggcattggtccttgcactttgtaaaaatattggtatt 3056  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 24370 - 24333
Alignment:
Q  219 tccctgcattttgtaaaaatattggtattggtctctct 256  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  24370 tccctgcactttgtaaaaatattggtattggtccctct 24333  T

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