View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12034_high_14 (Length: 292)
Name: NF12034_high_14
Description: NF12034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12034_high_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 12 - 292
Target Start/End: Original strand, 8882250 - 8882530
Alignment:
| Q |
12 |
gaacaaaacacagagaaaaacaaatttgaatccaaggagcaactaagattaatctaagcatcttaacattttgcctaaaaaatcatttaaactaatgttt |
111 |
Q |
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| T |
8882250 |
gaacaaaacacagagaaaaacaaatttgaatccaaggagcaactaagattagtctaagcatcttaatattttgcctaaaaaatcatttaaactaatgttt |
8882349 |
T |
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| Q |
112 |
tagaaaccaaattggacatcctagtaccgatgcatagctcaaccactctaactattcaaagcaacataaaactactattaatatttgtatttaaattaca |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8882350 |
tagaaaccaaattggacatcctagtaccgatgcatagctcaaccactctaactattcgaagcaacataaaactactattaatatttgtatttaaattaca |
8882449 |
T |
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| Q |
212 |
atttagctctgtatatatagagttgtaagtaaaagttttaagagtcttctctgtatacaatatatctcttatggttatgta |
292 |
Q |
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| T |
8882450 |
atttagctctgtatatatagagttgtaagtaaaagttttaagagtcttctctgtatacaatatatctcatatggttatgta |
8882530 |
T |
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