View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12034_high_3 (Length: 668)

Name: NF12034_high_3
Description: NF12034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12034_high_3
NF12034_high_3
[»] chr2 (3 HSPs)
chr2 (187-419)||(43114211-43114443)
chr2 (13-184)||(43113378-43113550)
chr2 (519-652)||(43114822-43114955)
[»] chr5 (3 HSPs)
chr5 (15-184)||(28138128-28138297)
chr5 (239-286)||(36434661-36434708)
chr5 (116-173)||(36434187-36434244)
[»] chr3 (4 HSPs)
chr3 (13-184)||(47401607-47401776)
chr3 (187-286)||(47402515-47402614)
chr3 (574-652)||(11596176-11596254)
chr3 (571-652)||(36036007-36036088)
[»] chr4 (4 HSPs)
chr4 (13-184)||(2656770-2656941)
chr4 (187-285)||(4883556-4883654)
chr4 (230-286)||(2663294-2663350)
chr4 (187-227)||(2658581-2658621)
[»] chr1 (6 HSPs)
chr1 (571-652)||(49508391-49508472)
chr1 (571-652)||(8771405-8771486)
chr1 (187-285)||(42605966-42606064)
chr1 (571-652)||(45432648-45432727)
chr1 (230-285)||(25184545-25184600)
chr1 (253-285)||(22964007-22964039)
[»] chr8 (2 HSPs)
chr8 (571-652)||(13533311-13533392)
chr8 (571-652)||(13622851-13622932)
[»] chr7 (4 HSPs)
chr7 (571-652)||(34762838-34762919)
chr7 (571-652)||(34763928-34764009)
chr7 (239-281)||(22323707-22323749)
chr7 (239-285)||(22728756-22728802)
[»] scaffold0010 (2 HSPs)
scaffold0010 (571-642)||(236850-236921)
scaffold0010 (609-652)||(236805-236848)
[»] chr6 (1 HSPs)
chr6 (251-285)||(31538600-31538634)


Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 187 - 419
Target Start/End: Original strand, 43114211 - 43114443
Alignment:
Q  187 gtcaaacctggacataaatgcttcagaatgagcaggaaaatagtagggtaattttaaggttagggttagcttgacctgacaagctttagtaagtaagatt 286  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43114211 gtcaaacctggacataaatgtttcagaatgagcgggaaaatactagggtaattttagggttagggttagcttgacctgacaagctttagtaagtaagatt 43114310  T
Q  287 aactaatttgagtagatcatagcttaaagtttttagcttannnnnnnattagtttaatttgagtagattacaatgataaaattgagagaaaaaatattaa 386  Q
    ||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43114311 aactaatttgagtagatcatagcttaaagtttttaacttatttttttattagtttaatttgagtagattacaatgataaaattgagagaaaaaatattaa 43114410  T
Q  387 gctaaaaactttaagctataatctacacaagta 419  Q
    |||||||||||||||||||||||||||||||||    
T  43114411 gctaaaaactttaagctataatctacacaagta 43114443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 43113378 - 43113550
Alignment:
Q  13 agacaaaatcatcttcacctcttcaacatcagactcggctatgtatgtcctaaacttcacacaatacttgttgacaacatttccaaaggatgaagctgga 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43113378 agacaaaatcatcttcacctcttcaacatcagactcggctatgtatgtcttaaatttcacacaatacttgttgacaacatttccaaaggatgaagctgga 43113477  T
Q  113 tttttgagcaaaggacctgcaacatcacaaagcttt-aaaaaataagaaacgatattaaaaaacgttgtaatt 184  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  43113478 tttttgagcaaaggacctgcaacatcacaaagctttaaaaaaataggaaacgatattaaaaaacgttgtaatt 43113550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 519 - 652
Target Start/End: Original strand, 43114822 - 43114955
Alignment:
Q  519 ataacttatgttaacccttcagtagattttctaaggagattaacattttattactggctattgctcgaggcatgcaatctcttatcttcgaatctgattg 618  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43114822 ataacttatgttaacccttcggtagattttctagggagattaacattttattactggctattgctcgaggcatgcaatctcttatcttcgaatctgattg 43114921  T
Q  619 caaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||||||||||| |||||||| |||||||    
T  43114922 caaaattgtggtggatgctgtgaactttagtgtc 43114955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 7e-60; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 28138297 - 28138128
Alignment:
Q  15 acaaaatcatcttcacctcttcaacatcagactcggctatgtatgtcctaaacttcacacaatacttgttgacaacatttccaaaggatgaagctggatt 114  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| || || |||||||||| ||||||||    
T  28138297 acaaaatcatcttcacctcttcaacatcatactcgactatgtatgtcataaacttcacataatacttgttgacatcactttcaaaggatgacgctggatt 28138198  T
Q  115 tttgagcaaaggacctgcaacatcacaaagctttaaaaaataagaaacgatattaaaaaacgttgtaatt 184  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||||    
T  28138197 tttgagcaaaggacctgcaacatcataaaggtttaaaaaataggaaacgatattaaaacacgtcgtaatt 28138128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 36434661 - 36434708
Alignment:
Q  239 tttaaggttagggttagcttgacctgacaagctttagtaagtaagatt 286  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  36434661 tttagggttagggttagcttgaccagacaaactttagtaagtaagatt 36434708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 36434187 - 36434244
Alignment:
Q  116 ttgagcaaaggacctgcaacatcacaaagctttaaaaaataagaaacgatattaaaaa 173  Q
    |||||||||||||||| |||| || |||||||||||||||| |||| |||||| ||||    
T  36434187 ttgagcaaaggacctgaaacaacataaagctttaaaaaataggaaaagatattgaaaa 36434244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 47401607 - 47401776
Alignment:
Q  13 agacaaaatcatcttcacctcttcaacatcagactcggctatgtatgtcctaaacttcacacaatacttgttgacaacatttccaaaggatgaagctgga 112  Q
    ||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||| |    
T  47401607 agacaaaatcatcttcacctcttcaacatcatactcgact--gtatgtcctaaacttcacacaatacttgttgacaacactttcaaagaatgaagctgaa 47401704  T
Q  113 tttttgagcaaaggacctgcaacatcacaaagctttaaaaaataagaaacgatattaaaaaacgttgtaatt 184  Q
    ||||| ||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||| |||| ||||||    
T  47401705 ttttttagcaaaggacctgcaacatcataaaggtttgaaaaataggaaacgatattaaaacacgtcgtaatt 47401776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 47402515 - 47402614
Alignment:
Q  187 gtcaaacctggacataaatgcttcagaatgagcaggaaaatagtagggtaattttaaggttagggttagcttgacctgacaagctttagtaagtaagatt 286  Q
    ||||||||||||||||||||||| ||||||| | | |||||  || | |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47402515 gtcaaacctggacataaatgctttagaatgatcggtaaaatgctaagttaattttagggttagggttagcttgacctgacaagctttagtaagtaagatt 47402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 574 - 652
Target Start/End: Complemental strand, 11596254 - 11596176
Alignment:
Q  574 ggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||| ||||||||| ||||| ||||||| ||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  11596254 ggctattgcacgaggcatgtaatctgttatctttgaatcggattgcaaaattgtgatggatggtgtaaactctagtgtc 11596176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 571 - 652
Target Start/End: Complemental strand, 36036088 - 36036007
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    |||||||||||| |||  |||||||||  ||||||| ||||  |||| ||||||||||||||||||||||||||||||||||    
T  36036088 actggctattgcacgattcatgcaatccgttatctttgaattggattccaaaattgtggtggatgttgtgaactctagtgtc 36036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 2e-51; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 2656770 - 2656941
Alignment:
Q  13 agacaaaatcatcttcacctcttcaacatcagactcggctatgtatgtcctaaacttcacacaatacttgttgacaacatttccaaaggatgaagctgga 112  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| || |  |||||||||||||  ||    
T  2656770 agacaaaatcatattcacctcttcaacatcatactcgactatgtatgtcctaaacttcacacaatatttgttgacagcaatatcaaaggatgaagcatga 2656869  T
Q  113 tttttgagcaaaggacctgcaacatcacaaagctttaaaaaataagaaacgatattaaaaaacgttgtaatt 184  Q
    ||||||||||||||||||||||||||| |||| |||||||||||  |||| ||||||||| |||| ||||||    
T  2656870 tttttgagcaaaggacctgcaacatcataaaggtttaaaaaatagaaaactatattaaaacacgtcgtaatt 2656941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 4883556 - 4883654
Alignment:
Q  187 gtcaaacctggacataaatgcttcagaatgagcaggaaaatagtagggtaattttaaggttagggttagcttgacctgacaagctttagtaagtaagat 285  Q
    |||||||||  |||||||||||| ||||||||| |||||||  |||| || ||||| |||||||  ||||||||||| |||||||||||||||||||||    
T  4883556 gtcaaacctacacataaatgcttgagaatgagcgggaaaatgttaggttagttttagggttaggaatagcttgacctaacaagctttagtaagtaagat 4883654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 2663294 - 2663350
Alignment:
Q  230 tagggtaattttaaggttagggttagcttgacctgacaagctttagtaagtaagatt 286  Q
    |||| ||||||||||||||| |||| ||||| |||||||||| ||||||||||||||    
T  2663294 taggttaattttaaggttagagttaacttgatctgacaagctctagtaagtaagatt 2663350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 2658581 - 2658621
Alignment:
Q  187 gtcaaacctggacataaatgcttcagaatgagcaggaaaat 227  Q
    |||||||||||| |||||||||| ||||||||| |||||||    
T  2658581 gtcaaacctggaaataaatgctttagaatgagcgggaaaat 2658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 571 - 652
Target Start/End: Original strand, 49508391 - 49508472
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49508391 actggctattgctcgaggcatgcaatctgttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 49508472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 571 - 652
Target Start/End: Complemental strand, 8771486 - 8771405
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8771486 actggctattgctcgaggcatgtaatctgttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 8771405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 42605966 - 42606064
Alignment:
Q  187 gtcaaacctggacataaatgcttcagaatgagcaggaaaatagtagggtaattttaaggttagggttagcttgacctgacaagctttagtaagtaagat 285  Q
    |||||||||| |||||||||||| ||||||||| |||||||  |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  42605966 gtcaaacctgaacataaatgctttagaatgagcgggaaaatgctaggttaattttagggttagggttagcttgacctgacaagctttaataagtaagat 42606064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 571 - 652
Target Start/End: Original strand, 45432648 - 45432727
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  45432648 actggctattgctcgaggcatgcaatct--tatcttcgaatctgattgcaaaattgtggtggatgctgtgaactatagtgtc 45432727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 25184600 - 25184545
Alignment:
Q  230 tagggtaattttaaggttagggttagcttgacctgacaagctttagtaagtaagat 285  Q
    |||| ||| |||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  25184600 taggttaaatttagggttagggttagcttgaccagacaagctttaataagtaagat 25184545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 22964039 - 22964007
Alignment:
Q  253 tagcttgacctgacaagctttagtaagtaagat 285  Q
    |||||||||| ||||||||||||||||||||||    
T  22964039 tagcttgaccagacaagctttagtaagtaagat 22964007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 571 - 652
Target Start/End: Original strand, 13533311 - 13533392
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13533311 actggctattgctcgaggcatgcaacctgttatcttcgaatctgattgcaaaattgtggtggatgctgtgaactctagtgtc 13533392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 571 - 652
Target Start/End: Original strand, 13622851 - 13622932
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13622851 actggctattgctcgaggcatgcaacctgttatcttcgaatctgattgcaaaattgtggtggatgctgtgaactctagtgtc 13622932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 571 - 652
Target Start/End: Complemental strand, 34762919 - 34762838
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  34762919 actggctattgctcgaggcatgcaatctgttatcttcaaatctgattgcaaaattgtggtggatgctgtgaactctagtgtc 34762838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 571 - 652
Target Start/End: Original strand, 34763928 - 34764009
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34763928 actggctattgctcgaggcatacaatctgttatcttcgaatctgattgcaaaattgtggtggatgctgtgaactctagtgtc 34764009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 22323707 - 22323749
Alignment:
Q  239 tttaaggttagggttagcttgacctgacaagctttagtaagta 281  Q
    |||| |||||||||||||||||||  |||||||||||||||||    
T  22323707 tttagggttagggttagcttgaccaaacaagctttagtaagta 22323749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 22728802 - 22728756
Alignment:
Q  239 tttaaggttagggttagcttgacctgacaagctttagtaagtaagat 285  Q
    |||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  22728802 tttagggttagggttagcttgaccagacaaactttaataagtaagat 22728756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 571 - 642
Target Start/End: Complemental strand, 236921 - 236850
Alignment:
Q  571 actggctattgctcgaggcatgcaatctcttatcttcgaatctgattgcaaaattgtggtggatgttgtgaa 642  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  236921 actggctattgctcgaggcatgcaatctgttatcttcgaatctgattgcaaaattgtggtggatgttgtgaa 236850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 609 - 652
Target Start/End: Complemental strand, 236848 - 236805
Alignment:
Q  609 aatctgattgcaaaattgtggtggatgttgtgaactctagtgtc 652  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  236848 aatctgattgcaaaattgtggtggatgctgtgaactctagtgtc 236805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 31538634 - 31538600
Alignment:
Q  251 gttagcttgacctgacaagctttagtaagtaagat 285  Q
    |||||||||||| ||||||||||||||||||||||    
T  31538634 gttagcttgaccagacaagctttagtaagtaagat 31538600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University