View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12034_low_14 (Length: 333)

Name: NF12034_low_14
Description: NF12034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12034_low_14
NF12034_low_14
[»] chr1 (56 HSPs)
chr1 (44-142)||(44223497-44223595)
chr1 (136-229)||(44223647-44223740)
chr1 (241-320)||(13918838-13918918)
chr1 (241-320)||(999115-999194)
chr1 (241-320)||(27172119-27172198)
chr1 (241-320)||(49317755-49317834)
chr1 (241-320)||(999496-999575)
chr1 (241-320)||(20480171-20480250)
chr1 (241-320)||(49318137-49318216)
chr1 (241-313)||(42611188-42611261)
chr1 (241-320)||(9347129-9347209)
chr1 (241-317)||(21687441-21687517)
chr1 (241-320)||(48105087-48105167)
chr1 (241-320)||(50430052-50430132)
chr1 (241-320)||(50526443-50526523)
chr1 (241-320)||(9347522-9347601)
chr1 (241-312)||(20480591-20480662)
chr1 (241-320)||(50615592-50615671)
chr1 (241-320)||(50623420-50623499)
chr1 (241-318)||(32163016-32163094)
chr1 (241-320)||(6703463-6703543)
chr1 (241-320)||(13918449-13918529)
chr1 (241-320)||(20371323-20371403)
chr1 (241-320)||(26814697-26814777)
chr1 (241-320)||(28633723-28633803)
chr1 (241-320)||(28634128-28634208)
chr1 (241-320)||(42611585-42611665)
chr1 (241-320)||(46823846-46823926)
chr1 (241-320)||(48104681-48104761)
chr1 (241-313)||(49318421-49318493)
chr1 (241-313)||(4692411-4692484)
chr1 (241-313)||(6703872-6703945)
chr1 (241-320)||(26815090-26815170)
chr1 (241-320)||(46824249-46824329)
chr1 (241-313)||(47498304-47498375)
chr1 (241-320)||(20371043-20371121)
chr1 (242-320)||(50949536-50949615)
chr1 (241-318)||(27172514-27172592)
chr1 (241-320)||(21687028-21687108)
chr1 (241-313)||(44224097-44224169)
chr1 (241-320)||(50429659-50429739)
chr1 (241-286)||(19007738-19007783)
chr1 (251-320)||(44911408-44911477)
chr1 (241-313)||(50949164-50949237)
chr1 (241-320)||(44911028-44911108)
chr1 (241-287)||(17518606-17518652)
chr1 (241-287)||(47498499-47498545)
chr1 (241-313)||(49284412-49284485)
chr1 (241-289)||(1176720-1176768)
chr1 (241-304)||(19008737-19008801)
chr1 (241-320)||(4692025-4692104)
chr1 (258-305)||(32162750-32162797)
chr1 (241-287)||(13589663-13589709)
chr1 (241-286)||(50615243-50615289)
chr1 (241-286)||(50623071-50623117)
chr1 (241-304)||(39691987-39692051)
[»] chr5 (35 HSPs)
chr5 (241-320)||(43464163-43464242)
chr5 (241-320)||(22729411-22729490)
chr5 (241-320)||(37780323-37780402)
chr5 (241-320)||(43463759-43463838)
chr5 (241-318)||(37610205-37610282)
chr5 (241-320)||(2817152-2817232)
chr5 (241-320)||(12498570-12498650)
chr5 (241-320)||(21207229-21207309)
chr5 (241-320)||(26571135-26571215)
chr5 (241-318)||(22729011-22729088)
chr5 (241-313)||(2817553-2817625)
chr5 (241-313)||(10098919-10098991)
chr5 (241-320)||(12498899-12498979)
chr5 (241-320)||(34147481-34147561)
chr5 (241-320)||(37610589-37610668)
chr5 (241-322)||(10098522-10098604)
chr5 (241-320)||(19514528-19514609)
chr5 (241-320)||(3888242-3888322)
chr5 (241-320)||(25940985-25941065)
chr5 (241-318)||(37780715-37780793)
chr5 (241-305)||(19514949-19515014)
chr5 (241-313)||(26570732-26570805)
chr5 (241-320)||(3888633-3888713)
chr5 (241-320)||(30401885-30401965)
chr5 (241-320)||(41072185-41072264)
chr5 (251-320)||(25940535-25940604)
chr5 (241-320)||(11316717-11316797)
chr5 (241-305)||(31569910-31569974)
chr5 (241-320)||(34147144-34147222)
chr5 (241-313)||(11351405-11351478)
chr5 (241-313)||(18817589-18817662)
chr5 (241-289)||(16466744-16466793)
chr5 (241-313)||(18816955-18817028)
chr5 (241-320)||(11316945-11317025)
chr5 (241-313)||(42919308-42919380)
[»] chr3 (33 HSPs)
chr3 (245-320)||(3353522-3353597)
chr3 (241-320)||(42672981-42673060)
chr3 (241-320)||(40848524-40848603)
chr3 (241-320)||(42673267-42673346)
chr3 (241-320)||(48159900-48159980)
chr3 (241-312)||(3353131-3353202)
chr3 (241-320)||(24485431-24485510)
chr3 (241-320)||(44008372-44008451)
chr3 (241-313)||(27238878-27238951)
chr3 (241-320)||(40848932-40849012)
chr3 (241-320)||(48160304-48160384)
chr3 (241-320)||(53687891-53687971)
chr3 (241-320)||(22429567-22429646)
chr3 (241-320)||(10348770-10348850)
chr3 (241-313)||(26007185-26007257)
chr3 (241-320)||(26007590-26007670)
chr3 (241-320)||(27238468-27238548)
chr3 (241-313)||(36180559-36180630)
chr3 (241-320)||(53766166-53766246)
chr3 (241-312)||(24485025-24485096)
chr3 (241-320)||(53688274-53688353)
chr3 (241-320)||(36180961-36181041)
chr3 (241-320)||(44007970-44008050)
chr3 (241-320)||(47666306-47666386)
chr3 (241-320)||(42456166-42456244)
chr3 (241-313)||(22429161-22429234)
chr3 (241-305)||(47665914-47665979)
chr3 (241-313)||(21896489-21896561)
chr3 (241-287)||(8315086-8315132)
chr3 (241-286)||(42455793-42455839)
chr3 (241-287)||(47871126-47871172)
chr3 (241-301)||(53766569-53766630)
chr3 (241-305)||(1928420-1928484)
[»] chr8 (31 HSPs)
chr8 (241-320)||(41662524-41662604)
chr8 (241-320)||(6199067-6199147)
chr8 (241-320)||(16169177-16169256)
chr8 (241-320)||(17431290-17431370)
chr8 (241-313)||(25439104-25439176)
chr8 (241-320)||(37396711-37396791)
chr8 (241-313)||(24473746-24473819)
chr8 (241-313)||(34498125-34498198)
chr8 (241-320)||(37397116-37397196)
chr8 (251-313)||(20861616-20861678)
chr8 (241-313)||(15444625-15444698)
chr8 (241-301)||(25438795-25438856)
chr8 (241-320)||(9623505-9623585)
chr8 (241-313)||(13936726-13936798)
chr8 (241-320)||(16169578-16169658)
chr8 (241-320)||(24473346-24473426)
chr8 (241-303)||(34498543-34498606)
chr8 (241-313)||(13026638-13026711)
chr8 (260-320)||(33727076-33727136)
chr8 (241-313)||(2856529-2856602)
chr8 (241-313)||(9823339-9823412)
chr8 (241-313)||(13027259-13027332)
chr8 (241-313)||(15444214-15444287)
chr8 (241-313)||(39724026-39724099)
chr8 (241-313)||(6092780-6092851)
chr8 (241-320)||(6198661-6198741)
chr8 (241-299)||(33726697-33726756)
chr8 (241-287)||(43162237-43162283)
chr8 (241-313)||(3307341-3307414)
chr8 (245-289)||(7127660-7127704)
chr8 (265-313)||(39723430-39723478)
[»] chr6 (21 HSPs)
chr6 (241-320)||(32733967-32734047)
chr6 (241-320)||(22684329-22684408)
chr6 (241-320)||(22754660-22754739)
chr6 (241-320)||(10087829-10087909)
chr6 (241-320)||(33974270-33974350)
chr6 (241-320)||(29074343-29074422)
chr6 (241-320)||(29079107-29079186)
chr6 (241-320)||(29106916-29106995)
chr6 (241-320)||(2354412-2354491)
chr6 (241-305)||(7654534-7654599)
chr6 (245-318)||(13177029-13177102)
chr6 (241-320)||(22755060-22755140)
chr6 (241-287)||(3825530-3825576)
chr6 (251-305)||(32733571-32733625)
chr6 (241-313)||(33828993-33829066)
chr6 (241-313)||(33829614-33829687)
chr6 (241-287)||(10039679-10039725)
chr6 (242-320)||(13176624-13176702)
chr6 (241-287)||(13579655-13579701)
chr6 (241-320)||(2354781-2354861)
chr6 (241-289)||(31598730-31598778)
[»] chr4 (35 HSPs)
chr4 (241-320)||(292785-292865)
chr4 (241-320)||(4239337-4239417)
chr4 (241-320)||(25161881-25161961)
chr4 (241-320)||(28196744-28196824)
chr4 (241-320)||(32703621-32703701)
chr4 (252-320)||(44468894-44468962)
chr4 (241-320)||(23539844-23539922)
chr4 (241-320)||(48405965-48406044)
chr4 (241-320)||(9023247-9023327)
chr4 (241-320)||(9380310-9380390)
chr4 (241-320)||(9380712-9380792)
chr4 (241-313)||(12757770-12757842)
chr4 (241-320)||(28196349-28196429)
chr4 (241-320)||(39086594-39086674)
chr4 (241-320)||(39744436-39744516)
chr4 (241-320)||(43292328-43292408)
chr4 (241-320)||(26207364-26207443)
chr4 (241-320)||(169016-169097)
chr4 (241-318)||(293190-293268)
chr4 (241-320)||(169410-169490)
chr4 (241-320)||(9023651-9023731)
chr4 (241-320)||(23540223-23540303)
chr4 (241-320)||(43292040-43292120)
chr4 (241-320)||(48406356-48406435)
chr4 (241-320)||(26207717-26207797)
chr4 (241-320)||(32703228-32703308)
chr4 (241-320)||(39744033-39744113)
chr4 (241-318)||(39912057-39912134)
chr4 (241-305)||(39912473-39912537)
chr4 (241-313)||(36096453-36096526)
chr4 (241-313)||(50678782-50678855)
chr4 (252-320)||(25162284-25162352)
chr4 (241-287)||(3930484-3930530)
chr4 (241-313)||(36095820-36095893)
chr4 (241-301)||(56505696-56505757)
[»] chr7 (35 HSPs)
chr7 (241-320)||(13744204-13744283)
chr7 (241-320)||(18864373-18864452)
chr7 (241-320)||(48359323-48359402)
chr7 (241-320)||(9035264-9035344)
chr7 (241-320)||(10533037-10533117)
chr7 (241-320)||(20418891-20418971)
chr7 (241-313)||(22740569-22740641)
chr7 (241-320)||(37888836-37888916)
chr7 (241-320)||(37889230-37889310)
chr7 (241-320)||(37972367-37972447)
chr7 (241-318)||(36527387-36527464)
chr7 (241-320)||(18863970-18864050)
chr7 (241-320)||(20419295-20419375)
chr7 (241-320)||(22740159-22740239)
chr7 (241-320)||(29292925-29293005)
chr7 (241-320)||(37971963-37972043)
chr7 (241-320)||(38826884-38826964)
chr7 (241-320)||(42418999-42419079)
chr7 (241-320)||(3204672-3204750)
chr7 (242-320)||(48359629-48359707)
chr7 (241-320)||(3205064-3205144)
chr7 (241-320)||(13741560-13741640)
chr7 (241-320)||(17156970-17157050)
chr7 (241-320)||(36527769-36527849)
chr7 (241-320)||(42418594-42418674)
chr7 (241-320)||(9034870-9034951)
chr7 (241-320)||(29293317-29293397)
chr7 (241-301)||(16198967-16199028)
chr7 (241-313)||(44599492-44599565)
chr7 (241-313)||(44600113-44600186)
chr7 (241-313)||(13863316-13863389)
chr7 (241-285)||(27096050-27096094)
chr7 (241-289)||(27096344-27096392)
chr7 (241-289)||(27181911-27181959)
chr7 (241-285)||(27182209-27182253)
[»] chr2 (33 HSPs)
chr2 (241-322)||(18750095-18750176)
chr2 (241-320)||(6325318-6325398)
chr2 (241-320)||(8851151-8851231)
chr2 (241-320)||(26692791-26692871)
chr2 (241-320)||(19141820-19141898)
chr2 (241-318)||(37720207-37720285)
chr2 (245-313)||(6324924-6324993)
chr2 (241-320)||(5793450-5793530)
chr2 (241-320)||(7664644-7664724)
chr2 (241-320)||(8851553-8851633)
chr2 (241-313)||(16911247-16911319)
chr2 (241-313)||(38490819-38490891)
chr2 (241-313)||(16910830-16910903)
chr2 (241-320)||(7664251-7664331)
chr2 (241-320)||(17850981-17851060)
chr2 (241-312)||(7979982-7980053)
chr2 (241-320)||(41790494-41790573)
chr2 (241-313)||(26692399-26692472)
chr2 (241-320)||(5378664-5378744)
chr2 (244-320)||(7979573-7979648)
chr2 (241-320)||(19141447-19141526)
chr2 (241-320)||(5379930-5380010)
chr2 (260-320)||(17851373-17851433)
chr2 (241-320)||(41790883-41790963)
chr2 (241-320)||(18749729-18749808)
chr2 (241-313)||(2638823-2638896)
chr2 (241-313)||(2639460-2639533)
chr2 (241-313)||(26841590-26841663)
chr2 (241-287)||(32673147-32673193)
chr2 (241-313)||(7591204-7591277)
chr2 (241-313)||(18296079-18296152)
chr2 (241-313)||(26842216-26842289)
chr2 (241-289)||(43495607-43495655)
[»] scaffold0460 (2 HSPs)
scaffold0460 (241-320)||(333-413)
scaffold0460 (241-318)||(736-813)
[»] scaffold0041 (2 HSPs)
scaffold0041 (241-320)||(38666-38746)
scaffold0041 (274-320)||(38288-38334)
[»] scaffold0017 (2 HSPs)
scaffold0017 (241-320)||(185245-185325)
scaffold0017 (241-313)||(184842-184915)
[»] scaffold0176 (2 HSPs)
scaffold0176 (241-320)||(19624-19703)
scaffold0176 (241-320)||(20014-20094)
[»] scaffold0069 (2 HSPs)
scaffold0069 (241-320)||(50477-50557)
scaffold0069 (241-320)||(50078-50156)
[»] scaffold0029 (1 HSPs)
scaffold0029 (241-320)||(9908-9989)
[»] scaffold0110 (1 HSPs)
scaffold0110 (241-287)||(45811-45857)
[»] scaffold0319 (1 HSPs)
scaffold0319 (241-287)||(6701-6747)
[»] scaffold0328 (1 HSPs)
scaffold0328 (241-313)||(6773-6846)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 8e-49; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 44223497 - 44223595
Alignment:
Q  44 ccactaagcaagcatccatgtgtcaaaaaactaaacaaccatcataaaaaagattttacaatgtagatcattatgcaactattgaagcaaaatgatatc 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44223497 ccactaagcaagcatccatgtgtcaaaaaactaaacaaccatcataaaaaagattttacaatgtagatcattatgcaactattgaagcaaaatgatatc 44223595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 44223647 - 44223740
Alignment:
Q  136 tgatatccgatagaaaggagttaaaatatagaatgataagaatgtcttaaaacactttcttgatctcttatctcaattgtgaggtttatcctct 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44223647 tgatagccgatagaaaggagttaaaatatagaatgataagaatgtcttaaaacactttcttgatctcttatctcaattgtgaggtttatcctct 44223740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 13918918 - 13918838
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  13918918 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccct 13918838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 999115 - 999194
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccct 999194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 27172119 - 27172198
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  27172119 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 27172198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 49317755 - 49317834
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||| ||||||    
T  49317755 ttaattgcacttttccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccct 49317834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 999575 - 999496
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  999575 ttaattgcacttttccccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccct 999496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 20480171 - 20480250
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  20480171 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 20480250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 49318216 - 49318137
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||| ||||||    
T  49318216 ttaattgcactttcccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccct 49318137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 42611188 - 42611261
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgatttt 42611261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 9347129 - 9347209
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  9347129 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 9347209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 21687517 - 21687441
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccc 317  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||| |||||||||||    
T  21687517 ttaatagcacttttccccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccc 21687441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 48105167 - 48105087
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  48105167 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 48105087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 50430132 - 50430052
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 50430052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 50526523 - 50526443
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  50526523 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 50526443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 9347601 - 9347522
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||||| ||||||    
T  9347601 ttaattgcactttcccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 9347522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 20480662 - 20480591
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgattt 312  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||| ||||||    
T  20480662 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 50615671 - 50615592
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||||||| || ||||||| ||||||    
T  50615671 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccct 50615592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 50623499 - 50623420
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||||||| || ||||||| ||||||    
T  50623499 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccct 50623420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 32163094 - 32163016
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||    
T  32163094 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 32163016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 6703463 - 6703543
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| || |||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  6703463 ttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccct 6703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 13918449 - 13918529
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  13918449 ttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 13918529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 20371403 - 20371323
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca-tctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||| | ||||| ||||||    
T  20371403 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccct 20371323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 26814697 - 26814777
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  26814697 ttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 26814777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 28633723 - 28633803
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||| | ||||||||||||||| ||||||| ||||||    
T  28633723 ttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccct 28633803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 28634208 - 28634128
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccct 28634128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 42611665 - 42611585
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||| | ||||||| ||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccct 42611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 46823846 - 46823926
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||   ||||||||||||||| ||||||| ||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccct 46823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 48104681 - 48104761
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 48104761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 49318493 - 49318421
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| |||||||||||||||||  ||| |||||||||||||||| ||||||||||||||| |||||||    
T  49318493 ttaattgcatttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgatttt 49318421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 4692484 - 4692411
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||| | ||||||||||||||| |||||||    
T  4692484 ttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgatttt 4692411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 6703945 - 6703872
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||||| | ||||||||||||||| |||||||    
T  6703945 ttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgatttt 6703872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 26815170 - 26815090
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||  ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  26815170 ttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 26815090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 46824329 - 46824249
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| || ||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||||| ||||||    
T  46824329 ttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 46824249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 47498304 - 47498375
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||| | |||||||    
T  47498304 ttaattgcacttt-ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgatttt 47498375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 20371043 - 20371121
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||| ||| ||||| |||||||| | ||||||||||||||| ||||||| ||||||    
T  20371043 ttaattgcacttt-ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 20371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 50949615 - 50949536
Alignment:
Q  242 taattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||| ||||| ||||||||| ||| |||||||||||||||||||| |||| |||||| ||||||| ||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccct 50949536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 27172592 - 27172514
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    ||||||||||||||||||| | || |||||||| |||||||||||||||| ||| ||||||||||| ||||||| ||||    
T  27172592 ttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgcccc 27172514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 21687028 - 21687108
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| ||||  |||||||| | ||||||||||||||| ||||||| ||||||    
T  21687028 ttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccct 21687108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 44224169 - 44224097
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||| |||| | |||||| |||| |||| ||||||||||| ||||||||||||||| |||||||    
T  44224169 ttaattgcactttgccccatgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgatttt 44224097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 50429659 - 50429739
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||| |||||||||| | ||| ||||| || |||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  50429659 ttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccct 50429739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 19007738 - 19007783
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgc 286  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||    
T  19007738 ttaattgcactttcccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 44911477 - 44911408
Alignment:
Q  251 ttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||| |||||||||||||| |  || |||| |||||| ||||||| ||||||    
T  44911477 ttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccct 44911408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 50949164 - 50949237
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||| ||||||||| |||||||| |||||| |||||||||||||| ||||| |||| |||||| |||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 44911028 - 44911108
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| ||||| |||| |||||||| |||||||||||||| | ||| |||| |||||| ||||||| ||||||    
T  44911028 ttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccct 44911108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 17518652 - 17518606
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||    
T  17518652 ttaattgcacttttccccctatcttttgccaattgtgcgattttgca 17518606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 47498545 - 47498499
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||    
T  47498545 ttaattgcacttttccccctatagtttgtcaattgtgcggttttgca 47498499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 49284412 - 49284485
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  49284412 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 49284485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 1176720 - 1176768
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||||||    
T  1176720 ttaattgcactttcccccctatattttgctaattgtgcgattttgcatc 1176768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 19008801 - 19008737
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacg 304  Q
    ||||||||||||||||||| ||||||||  ||| |||||||||||||| | |||||||| |||||    
T  19008801 ttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacg 19008737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 4692025 - 4692104
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||  || ||||||||||| || ||| ||||||||||||  ||||||| |||||| | ||||| ||||||    
T  4692025 ttaattgcactttctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccct 4692104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 32162750 - 32162797
Alignment:
Q  258 cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    ||||||||||||||| ||||| |||||||| | |||||||||||||||    
T  32162750 cctatagtttgccaattgtgcaattttgcaccccatagttttaaacga 32162797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 13589709 - 13589663
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  ||||| || ||||||||||||||    
T  13589709 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 13589663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 50615243 - 50615289
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgc 286  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||    
T  50615243 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 50623071 - 50623117
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgc 286  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||    
T  50623071 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 39692051 - 39691987
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacg 304  Q
    ||||||||||||||||||| |||| |||| ||| |||||||||||||| | |||  |||||||||    
T  39692051 ttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacg 39691987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 43464242 - 43464163
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  43464242 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccct 43464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 22729490 - 22729411
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  22729490 ttaattgcacttttccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 22729411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 37780323 - 37780402
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||| ||||||| ||||||    
T  37780323 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccct 37780402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 43463759 - 43463838
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 43463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 37610205 - 37610282
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||||||| ||||||| ||||    
T  37610205 ttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgcccc 37610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 2817152 - 2817232
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||| ||||||| ||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccct 2817232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 12498570 - 12498650
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  12498570 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 12498650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 21207229 - 21207309
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 21207309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 26571215 - 26571135
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  26571215 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 26571135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 22729011 - 22729088
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||  |||||||||||||||| ||||||| ||||    
T  22729011 ttaattgcacttttccccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc 22729088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 2817625 - 2817553
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||  |||||||||||||| |||||||    
T  2817625 ttaattgcacttttccccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgatttt 2817553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 10098991 - 10098919
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  10098991 ttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 10098919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 12498979 - 12498899
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||| | ||||||| ||||||    
T  12498979 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccct 12498899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 34147561 - 34147481
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  34147561 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccct 34147481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 37610668 - 37610589
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||| ||||| ||||||||||||||| || |||||||||||||| ||||| ||||||||||| ||||||| ||||||    
T  37610668 ttaattgtactttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccct 37610589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 10098522 - 10098604
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccccttt 322  Q
    |||||||||||||| || ||||||||||| ||| ||||||||||||||||  |||||||||||||| ||||||| ||||||||    
T  10098522 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgcccccttt 10098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 19514528 - 19514609
Alignment:
Q  241 ttaattgcacttttcccc--ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| ||||  |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  19514528 ttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 19514609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 3888242 - 3888322
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||| ||||||| |||||||||||||| ||| |||||||||| | ||||||||||||||| ||||||| ||||||    
T  3888242 ttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccct 3888322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 25941065 - 25940985
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||| |||||||||||  || | |||||||||||||| ||||||||||||||| ||||||| ||||||    
T  25941065 ttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccct 25940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 37780793 - 37780715
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    ||||||| ||||||||||| |||||||||| || |||||||||||||| ||||| ||||||||||| ||||||| ||||    
T  37780793 ttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgcccc 37780715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 19515014 - 19514949
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | |||||||||||||||    
T  19515014 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacga 19514949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 26570732 - 26570805
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||| ||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  26570732 ttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 26570805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 3888713 - 3888633
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||| || ||| |||||||| ||| |||||||||| | ||||||||||||||| ||||||| ||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccct 3888633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 30401885 - 30401965
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| | |||||||||||||| ||| | |||||||||| ||||||||||||| | ||||||| ||||||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccct 30401965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 41072264 - 41072185
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||| ||||||||| ||||||||||| ||| ||| |||||||||| |  |||||||||||||| ||||||| ||||||    
T  41072264 ttaattacacttttcctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccct 41072185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 25940535 - 25940604
Alignment:
Q  251 ttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||| ||||||||||||| ||| |||||||||||||| |  |||||||||||||| ||||||| ||||||    
T  25940535 tttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccct 25940604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 11316717 - 11316797
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||| ||||||||||||||| ||| | ||||||||||  ||| |||||||||| | ||||| ||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccct 11316797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 31569910 - 31569974
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||||| |||||  ||||||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacga 31569974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 34147144 - 34147222
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||  ||||||||  ||| |||||||||||||| | | ||||||||||||| ||||||| ||||||    
T  34147144 ttaattgcacttttccct-tatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccct 34147222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 11351478 - 11351405
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| | |||||  |||||||| |||||||||||||| | |||| |||||||||| |||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 18817662 - 18817589
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  18817662 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 18817589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 16466793 - 16466744
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||||||||| |||| ||||| || ||||||||||||||||    
T  16466793 ttaattgcacttttcccccctatattttgctaattgtgcgattttgcatc 16466744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 18816955 - 18817028
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  18816955 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 18817028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 11317025 - 11316945
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||  || || || |||||||| |||||||||||||| | ||| |||||||| || ||||||| ||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccct 11316945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 42919308 - 42919380
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||| ||||| |||||||| ||| |||| ||||||||||| || | |||  |||||||||| |||||||    
T  42919308 ttaattgctctttttcccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgatttt 42919380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 3353597 - 3353522
Alignment:
Q  245 ttgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccct 3353522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 42672981 - 42673060
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  42672981 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccct 42673060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 40848524 - 40848603
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||||||| ||||||| ||||||    
T  40848524 ttaattgcacttttccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccct 40848603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 42673346 - 42673267
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  42673346 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 42673267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 48159900 - 48159980
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  48159900 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 48159980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 3353131 - 3353202
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgattt 312  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||    
T  3353131 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 24485510 - 24485431
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| | |||||||||||| || ||||||| ||||||    
T  24485510 ttaattgcacttttctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccct 24485431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 44008451 - 44008372
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||  ||||||||||||||| ||||| |||||||| ||||||||||||||||| | ||||||||||||    
T  44008451 ttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccct 44008372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 27238951 - 27238878
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| |||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 27238878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 40849012 - 40848932
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||| | ||||||| ||||||    
T  40849012 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccct 40848932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 48160384 - 48160304
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  48160384 ttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 48160304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 53687891 - 53687971
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  53687891 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccct 53687971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 22429646 - 22429567
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| || ||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  22429646 ttaattgcactttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 22429567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 10348850 - 10348770
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| || | ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  10348850 ttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 10348770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 26007185 - 26007257
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||| |||||||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  26007185 ttaattgcattttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 26007257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 26007670 - 26007590
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||||  ||||| |||||||||| ||||||| ||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccct 26007590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 27238468 - 27238548
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||| |  |||||||||||||| ||||||| ||||||    
T  27238468 ttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccct 27238548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 36180559 - 36180630
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||| ||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||    
T  36180559 ttaattgcacatttcccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgatttt 36180630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 53766166 - 53766246
Alignment:
Q  241 ttaattgcacttttccc-cctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| || ||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 53766246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 24485025 - 24485096
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgattt 312  Q
    |||||| || |||||| ||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||    
T  24485025 ttaattacatttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattt 24485096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 53688353 - 53688274
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||   |||||||| |||||| ||||||| ||||||    
T  53688353 ttaattgcactttctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccct 53688274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 36181041 - 36180961
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| ||||||||||||  || |||||||||||| | | ||||||||||||||| |||||||| |||||    
T  36181041 ttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccct 36180961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 44007970 - 44008050
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||  ||| ||||| | ||||||||| |||||||||||||| ||||||| ||||||    
T  44007970 ttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccct 44008050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 47666386 - 47666306
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||| | ||| |||| |||||| ||||||| ||||||    
T  47666386 ttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccct 47666306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 42456244 - 42456166
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| ||||||| ||||  |||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  42456244 ttaattgcacttt-ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 42456166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 22429161 - 22429234
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||| |||||||| ||||||| |||||| |  |||||||||||||| |||||||    
T  22429161 ttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgatttt 22429234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 47665914 - 47665979
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    |||||||||||||| ||||| |||||||| ||| |||||||||||||| ||||| |||| ||||||    
T  47665914 ttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacga 47665979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 21896561 - 21896489
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| |||| |||||||| |||| ||| |||||||||||||| | ||| |||||| |||| |||||||    
T  21896561 ttaattgcattttttcccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgatttt 21896489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 8315132 - 8315086
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||||||||    
T  8315132 ttaattgcactttcccccctatattttgtcaattgtgcgattttgca 8315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 42455793 - 42455839
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgc 286  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||    
T  42455793 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 47871172 - 47871126
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  ||||| || ||||||||||||||    
T  47871172 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 47871126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 53766630 - 53766569
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaa 301  Q
    ||||||||||||||||||| |||||||||| || ||||| |||||||| |  ||||||||||    
T  53766630 ttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 1928484 - 1928420
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    ||||||||| ||| | ||||||  |||||||| |||||||||||||| | |||| ||||||||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacga 1928420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 41662524 - 41662604
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  41662524 ttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccct 41662604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 6199147 - 6199067
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  6199147 ttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccct 6199067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 16169177 - 16169256
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||  ||||||||||||||| ||||| |||||||| ||||||||||||||||| | ||||||||||||    
T  16169177 ttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccct 16169256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 17431290 - 17431370
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||| || ||||||||||||||||| ||||||| ||||||    
T  17431290 ttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccct 17431370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 25439176 - 25439104
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 25439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 37396711 - 37396791
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  37396711 ttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 37396791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 24473819 - 24473746
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||    
T  24473819 ttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 24473746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 34498125 - 34498198
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 34498198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 37397196 - 37397116
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||  | ||||||||||||||| ||| ||| ||||||    
T  37397196 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccct 37397116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 20861678 - 20861616
Alignment:
Q  251 ttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||| |||||||||||||| | ||||||||||||||| |||||||    
T  20861678 ttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 20861616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 15444698 - 15444625
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||| ||||||||| ||| |||| |||||||||||||| | ||||||||||||||| |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 15444625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 25438795 - 25438856
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaa 301  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | |||||||||||    
T  25438795 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 9623505 - 9623585
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| | | |||||||||||||| |||||||||||||| | ||||||||||||||| | ||||| ||||||    
T  9623505 ttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccct 9623585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 13936726 - 13936798
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||||||||||  ||| |||| |||||||||||||| | |||| |||||||||| |||||||    
T  13936726 ttaattgcacttttccccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 13936798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 16169658 - 16169578
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||  ||| ||||| | ||||||||| |||||||||||||| ||||||| ||||||    
T  16169658 ttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccct 16169578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 24473346 - 24473426
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||| | |||| ||||||| || ||||||| ||||||    
T  24473346 ttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccct 24473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 34498606 - 34498543
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaac 303  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||| | |||||||||||||    
T  34498606 ttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaac 34498543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 13026638 - 13026711
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| |||||  |||||||||| |||||||    
T  13026638 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgatttt 13026711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 33727136 - 33727076
Alignment:
Q  260 tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||| || ||||||||||||||  |||||||||||||||| ||||||| ||||||    
T  33727136 tatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccct 33727076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 2856529 - 2856602
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||| | |||||| |||||||||||||||| |||||||||||||| | |||||||| |||||  |||||||    
T  2856529 ttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgatttt 2856602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 9823412 - 9823339
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  9823412 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 9823339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 13027332 - 13027259
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 13027259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 15444214 - 15444287
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| |||||||| |||||||||||||| ||| | ||||| |||  ||||||||||||||| |||||||    
T  15444214 ttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgatttt 15444287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 39724099 - 39724026
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  39724099 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 39724026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 6092780 - 6092851
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||||||||||  |||| ||| |||||||||||||||| |||| ||||||  ||||||||||    
T  6092780 ttaattgca-ttttccccctatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgatttt 6092851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 6198661 - 6198741
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| ||| ||| || | |||| |||||||||||||| |  |||||||||||||| ||||||| ||||||    
T  6198661 ttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccct 6198741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 33726697 - 33726756
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagtttt 299  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||| ||  ||||||||    
T  33726697 ttaattgcactttttccccctatagtttaccaattgtgcgattttgcctcctatagtttt 33726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 43162237 - 43162283
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||| ||||  || ||||||||||||||    
T  43162237 ttaattgcacttttccccctatattttgttaattgtgcgattttgca 43162283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 3307341 - 3307414
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||| |||||||  |||| ||| |||||||||||||||| |||| |||||||| | |||||||    
T  3307341 ttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgatttt 3307414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 7127660 - 7127704
Alignment:
Q  245 ttgcacttttccccctatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||    
T  7127660 ttgcacttttccccctatcttttgctaattgtgcgattttgcatc 7127704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 39723430 - 39723478
Alignment:
Q  265 tttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||| |||||||||||||||| |||  |||||||||| |||||||    
T  39723430 tttgccaattgtgcgattttgcatcccatgtttttaaacgagcgatttt 39723478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 32734047 - 32733967
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccct 32733967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 22684408 - 22684329
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||| ||||||    
T  22684408 ttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccct 22684329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 22754660 - 22754739
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||| | ||||||||||||| ||||||||| ||||||    
T  22754660 ttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccct 22754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 10087909 - 10087829
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  10087909 ttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 10087829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 33974350 - 33974270
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  33974350 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 33974270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 29074422 - 29074343
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||| | |||||||| |||||| ||||||| ||||||    
T  29074422 ttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccct 29074343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 29079186 - 29079107
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||| | |||||||| |||||| ||||||| ||||||    
T  29079186 ttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccct 29079107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 29106995 - 29106916
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||| | |||||||| |||||| ||||||| ||||||    
T  29106995 ttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccct 29106916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 2354412 - 2354491
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| |||||||||||||||||  ||| ||| |||||||||||| ||| |||| |||||| ||||||||||||||    
T  2354412 ttaattgcatttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccct 2354491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 7654599 - 7654534
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | |||||||||||||||    
T  7654599 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacga 7654534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 13177102 - 13177029
Alignment:
Q  245 ttgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    ||||||||||||||||||||| || ||| |||| |||||| || ||||||||||||||||| ||||||| ||||    
T  13177102 ttgcacttttccccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgcccc 13177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 22755140 - 22755060
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| | |||||||| ||| | |||||||||||| | ||||||||||||||| ||||||| ||||||    
T  22755140 ttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccct 22755060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 3825530 - 3825576
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgca 3825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 32733571 - 32733625
Alignment:
Q  251 ttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    ||||||| |||||||||||||| | | |||||||||||| |||||||||||||||    
T  32733571 ttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacga 32733625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 33828993 - 33829066
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  33828993 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 33829066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 33829687 - 33829614
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  33829687 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 33829614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 10039679 - 10039725
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  ||||| || ||||||||||||||    
T  10039679 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 10039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 13176624 - 13176702
Alignment:
Q  242 taattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||| |||||  |||||||||||||||| ||| |||||||| ||| |||  ||||||| || ||||||| ||||||    
T  13176624 taattgcccttttttccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccct 13176702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 13579701 - 13579655
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||| |||||| |||||| || ||||||||||||||    
T  13579701 ttaattgcacttttctccctatcgtttgctaattgtgcgattttgca 13579655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 2354861 - 2354781
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| |||||||  |||||||||| ||| |||||||||||||| | ||| |||| |||||| | ||||| ||||||    
T  2354861 ttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccct 2354781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 31598778 - 31598730
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||||||||||||  ||||  || ||||||||||||||||    
T  31598778 ttaattgcacttttccccctatcttttgttaattgtgcgattttgcatc 31598730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 9e-24; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 292785 - 292865
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  292785 ttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccct 292865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 4239417 - 4239337
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  4239417 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 4239337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 25161881 - 25161961
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  25161881 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 25161961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 28196824 - 28196744
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  28196824 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 28196744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 32703701 - 32703621
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  32703701 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 32703621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 44468962 - 44468894
Alignment:
Q  252 tttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  44468962 tttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccct 44468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 23539844 - 23539922
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||| ||||||    
T  23539844 ttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccct 23539922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 48405965 - 48406044
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||| | ||||||||||||||| ||||||| ||||||    
T  48405965 ttaattgcacttttccccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccct 48406044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 9023247 - 9023327
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||  |||||| ||||||    
T  9023247 ttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccct 9023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 9380310 - 9380390
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||  | ||||||||||||||| ||||||| ||||||    
T  9380310 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccct 9380390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 9380792 - 9380712
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||   ||||||||||||||| ||||||| ||||||    
T  9380792 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccct 9380712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 12757770 - 12757842
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||| ||||||||  |||||||||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  12757770 ttaattgtacttttccttctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgatttt 12757842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 28196349 - 28196429
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  28196349 ttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 28196429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 39086674 - 39086594
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||| || |||||||||||||| ||||||| ||||||    
T  39086674 ttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccct 39086594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 39744516 - 39744436
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  39744516 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 39744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 43292408 - 43292328
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  43292408 ttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccct 43292328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 26207364 - 26207443
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| | ||| |||| |||||| ||||||| ||||||    
T  26207364 ttaattgcactttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccct 26207443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 169016 - 169097
Alignment:
Q  241 ttaattgcacttttc--cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||| | |||| |||||||||| ||||||| ||||||    
T  169016 ttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccct 169097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 293268 - 293190
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||    
T  293268 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 293190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 169490 - 169410
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||||| ||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  169490 ttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 9023731 - 9023651
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | |||||||||||| || ||||||| ||||||    
T  9023731 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccct 9023651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 23540303 - 23540223
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||| |  |||||||||||||| ||||||| ||||||    
T  23540303 ttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccct 23540223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 43292040 - 43292120
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||  ||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  43292040 ttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 43292120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 48406435 - 48406356
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||| ||||| ||||||||| |||||||| |||||||||||||| |  |||||||||||||| ||||||| ||||||    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccct 48406356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 26207797 - 26207717
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||| | ||| |||| |||||| ||||||| ||||||    
T  26207797 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccct 26207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 32703228 - 32703308
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| |||| |||||||| ||||||||| |||| | | ||||||||||||| ||||||| ||||||    
T  32703228 ttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccct 32703308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 39744033 - 39744113
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||| || | |||| |||||||||| ||||||| ||||||    
T  39744033 ttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccct 39744113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 39912057 - 39912134
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    |||||||||||||||| |||||||||||   || ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  39912057 ttaattgcacttttcctccctatagtttattaattgtgcgattttacatc-catagttttaaacgaacgattttgcccc 39912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 39912537 - 39912473
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacga 305  Q
    |||||| |||||||||  |||||||||  ||| |||||||||||||||| |||||||||||||||    
T  39912537 ttaattacacttttccttctatagtttatcaattgtgcgattttgcatcccatagttttaaacga 39912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 36096526 - 36096453
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 36096453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 50678782 - 50678855
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  50678782 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 50678855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 25162352 - 25162284
Alignment:
Q  252 tttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||| |||| ||| |||| |||||||||   ||||||||||||||| ||||||| ||||||    
T  25162352 tttccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccct 25162284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 3930530 - 3930484
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  ||||| || ||||||||||||||    
T  3930530 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 3930484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 36095820 - 36095893
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  36095820 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 36095893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 56505696 - 56505757
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaa 301  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||| | |||| ||||||    
T  56505696 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaa 56505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 13744283 - 13744204
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  13744283 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 13744204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 18864452 - 18864373
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||||||| ||||||    
T  18864452 ttaattgtacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccct 18864373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 48359323 - 48359402
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  48359323 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccct 48359402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 9035344 - 9035264
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  9035344 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 9035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 10533037 - 10533117
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  10533037 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 10533117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 20418891 - 20418971
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 20418971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 22740641 - 22740569
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 22740569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 37888836 - 37888916
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  37888836 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 37888916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 37889310 - 37889230
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  37889310 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 37889230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 37972447 - 37972367
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  37972447 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 37972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 36527387 - 36527464
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||| | ||||||||||||||| | ||||||||||    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttcccc 36527464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 18863970 - 18864050
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 18864050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 20419375 - 20419295
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  20419375 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 20419295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 22740159 - 22740239
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  22740159 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 22740239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 29292925 - 29293005
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||| ||| |||| |||||| ||||||| ||||||    
T  29292925 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccct 29293005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 37971963 - 37972043
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  37971963 ttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 37972043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 38826964 - 38826884
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||| |||| ||||||    
T  38826964 ttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccct 38826884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 42419079 - 42418999
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca-tctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||  | ||||||||||||||| ||||||| ||||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccct 42418999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 3204672 - 3204750
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||| | ||||| ||||||    
T  3204672 ttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccct 3204750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 48359707 - 48359629
Alignment:
Q  242 taattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||| | |||||||| |||||| ||||||| ||||||    
T  48359707 taattgcactttttcccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccct 48359629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 3205144 - 3205064
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | | ||||||||||||| ||||||| ||||||    
T  3205144 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccct 3205064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 13741560 - 13741640
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| |||||||| ||||||||| |||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  13741560 ttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 13741640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 17156970 - 17157050
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||| | |||||||||||| || ||||||| ||||||    
T  17156970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccct 17157050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 36527849 - 36527769
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||| | ||||||||||||| | |||||||||||||| ||||||||||||||| ||||||| ||||||    
T  36527849 ttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccct 36527769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 42418594 - 42418674
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||| |||  |||||||||||||| ||||||| ||||||    
T  42418594 ttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccct 42418674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 9034870 - 9034951
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctc-atagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| |||| |||||||| ||||||||| |||| | | |||||||||||||| ||||||| ||||||    
T  9034870 ttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccct 9034951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 29293397 - 29293317
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||   ||| |||| |||||| ||||||| ||||||    
T  29293397 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccct 29293317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 16199028 - 16198967
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaa 301  Q
    |||||||||||||| ||| | |||||||||||| |||||||||||||| | |||||||||||    
T  16199028 ttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 44599492 - 44599565
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  44599492 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 44599565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 44600186 - 44600113
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  44600186 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 44600113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 13863316 - 13863389
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  13863316 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 13863389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 27096050 - 27096094
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttg 285  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||    
T  27096050 ttaattgcactttcccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 27096392 - 27096344
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||||||||||||  |||| ||| |||| |||||||||||    
T  27096392 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatc 27096344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 27181911 - 27181959
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||||||||||||  |||| ||| |||| |||||||||||    
T  27181911 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatc 27181959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 27182253 - 27182209
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttg 285  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||||    
T  27182253 ttaattgcactttcccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 18750176 - 18750095
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccccttt 322  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||||    
T  18750176 ttaattgcacttctccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccccttt 18750095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 6325398 - 6325318
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||| ||||||| ||||||    
T  6325398 ttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccct 6325318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 8851151 - 8851231
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 8851231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 26692871 - 26692791
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 26692791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 19141898 - 19141820
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||| ||||||    
T  19141898 ttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccct 19141820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 37720207 - 37720285
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||    
T  37720207 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 37720285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 6324924 - 6324993
Alignment:
Q  245 ttgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgatttt 6324993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 5793450 - 5793530
Alignment:
Q  241 ttaattgcacttttcccccta-tagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||  |||||||||||||| ||||||| ||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct 5793530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 7664724 - 7664644
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  7664724 ttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 7664644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 8851633 - 8851553
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  8851633 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 8851553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 16911319 - 16911247
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||    
T  16911319 ttaattgcactttcgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 16911247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 38490891 - 38490819
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||| | ||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||||    
T  38490891 ttaattgcactttcctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgatttt 38490819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 16910830 - 16910903
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||| | ||||||||||||||| |||||||    
T  16910830 ttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 16910903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 7664251 - 7664331
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||  ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  7664251 ttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 7664331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 17850981 - 17851060
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | ||||||||| ||||| ||||||| ||||||    
T  17850981 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccct 17851060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 7980053 - 7979982
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgattt 312  Q
    |||||||||||||| || ||||||||||| || |||||||||||||| | ||||||||||||||| ||||||    
T  7980053 ttaattgcactttttcctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgattt 7979982  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 41790494 - 41790573
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||| | ||| |||| |||||| ||||||| ||||||    
T  41790494 ttaattgcatttttccccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccct 41790573  T

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Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 26692399 - 26692472
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||||||||||||| ||| |||||||||| ||| |||||||||||||| | ||||||||||||||| |||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 26692472  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 5378664 - 5378744
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | | |||||| |||||  ||||||| ||||||    
T  5378664 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccct 5378744  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 7979573 - 7979648
Alignment:
Q  244 attgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||  ||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  7979573 attgcacttttccct-tatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 7979648  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 19141447 - 19141526
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||| | ||||||||||||||| ||| ||| ||||||    
T  19141447 ttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccct 19141526  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 5380010 - 5379930
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||| | | |||||| |||||  ||||||| ||||||    
T  5380010 ttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccct 5379930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 17851433 - 17851373
Alignment:
Q  260 tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| ||||||||||| || | ||||||||||||||| ||||||| ||||||    
T  17851433 tatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccct 17851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 41790963 - 41790883
Alignment:
Q  241 ttaattgcacttttccccc-tatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||  | ||| |||| |||||| ||||||| ||||||    
T  41790963 ttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccct 41790883  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 18749729 - 18749808
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| | ||| ||||||| ||| | || ||||||||| | |||||||||||||||| |||||| ||||||    
T  18749729 ttaattgcacttttactcctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccct 18749808  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 2638823 - 2638896
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||| |||||||  |||||||| |||||||||||||| | |||| |||||||||| |||||||    
T  2638823 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 2638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 2639533 - 2639460
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  2639533 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 2639460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 26841590 - 26841663
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  26841590 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 26841663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 32673193 - 32673147
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    |||||||||||||| |||||||  |||||||| ||||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgca 32673147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 7591204 - 7591277
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||| ||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 7591277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 18296079 - 18296152
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||| ||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  18296079 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 18296152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 26842289 - 26842216
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    |||| |||||||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  26842289 ttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 26842216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 43495655 - 43495607
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatc 289  Q
    ||||||||||||| || |||||| ||||| || ||||||||||||||||    
T  43495655 ttaattgcactttcccacctatattttgctaattgtgcgattttgcatc 43495607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 333 - 413
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  333 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccct 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 813 - 736
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttcccc 318  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| | |||| |||||||||| ||||||| ||||    
T  813 ttaattgcactttttcccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgcccc 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 38746 - 38666
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| | |||||| |||||||||||||||| ||||||    
T  38746 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccct 38666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 38288 - 38334
Alignment:
Q  274 tgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||| || ||||||| ||||||    
T  38288 tgtgcgattttgcatcccatagttttaaatgagcgattttgccccct 38334  T

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Target: scaffold0017 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 185325 - 185245
Alignment:
Q  241 ttaattgcacttttcc-ccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  185325 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 185245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 184842 - 184915
Alignment:
Q  241 ttaattgcacttttcccc-ctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||||||||| || |||||||||| ||| ||||| |||||||| | ||||||||||||||| |||||||    
T  184842 ttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgatttt 184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 19624 - 19703
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| ||||||    
T  19624 ttaattgcaattttccccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 19703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 20094 - 20014
Alignment:
Q  241 ttaattgcacttttccccct-atagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||  | |||||||||||||  |||||||| ||||||    
T  20094 ttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccct 20014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 50557 - 50477
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca-tctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||| | ||||| ||||||    
T  50557 ttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccct 50477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 50078 - 50156
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttttccccct 320  Q
    ||||||||||||| |||||||||||||| ||| ||||| |||||||| | ||||||||||||||| ||||||| ||||||    
T  50078 ttaattgcacttt-ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 50156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 320
Target Start/End: Original strand, 9908 - 9989
Alignment:
Q  241 ttaattgcactttt-ccccctatagtttgccaagtgtgcgattttgca-tctcatagttttaaacgaacgatttttccccct 320  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||  | ||||||||||||||| ||||||| ||||||    
T  9908 ttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccct 9989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 45857 - 45811
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||    
T  45857 ttaattgcacttttccccctatcttttgccaattgtgcgattttgca 45811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 6747 - 6701
Alignment:
Q  241 ttaattgcacttttccccctatagtttgccaagtgtgcgattttgca 287  Q
    ||||||||||||||||||||||  ||||| || ||||||||||||||    
T  6747 ttaattgcacttttccccctatcttttgctaattgtgcgattttgca 6701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 6846 - 6773
Alignment:
Q  241 ttaattgcacttttc-cccctatagtttgccaagtgtgcgattttgcatctcatagttttaaacgaacgatttt 313  Q
    ||||||||| ||||| |||||||  |||||||| |||||||||||||| | |||  |||||||||| |||||||    
T  6846 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgatttt 6773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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