View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12035_low_8 (Length: 237)
Name: NF12035_low_8
Description: NF12035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12035_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 34547887 - 34547671
Alignment:
| Q |
5 |
aacattctatgaatctaacgccatccaaccacaatcacttgccagttgctatccaatcaagttgcagcaatctaaagggtgttttggtaatttcatcaca |
104 |
Q |
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| T |
34547887 |
aacattctacgaatctaacgccatccaaccacaatcacttgccagttactatccaatcaagttgcagcaatctaaagggtgttttggtaatttcatcaca |
34547788 |
T |
|
| Q |
105 |
taccaattgtataagaagaagagaagaccaaatcacgactcattcccacagatcaaaacaatgacttctcacagctgcattatctcacgcgccaccgctg |
204 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34547787 |
taccaattgtataagaagaagagaagatcaaatcacgactcattcccacagatcaaaacaatgacttctcacagctgcattatctcacgcgccaccgctg |
34547688 |
T |
|
| Q |
205 |
catttgccctcctctct |
221 |
Q |
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||||||||||||||||| |
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| T |
34547687 |
catttgccctcctctct |
34547671 |
T |
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