View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12038_high_8 (Length: 339)

Name: NF12038_high_8
Description: NF12038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12038_high_8
NF12038_high_8
[»] scaffold0328 (2 HSPs)
scaffold0328 (19-322)||(12974-13282)
scaffold0328 (119-247)||(15050-15178)
[»] scaffold0576 (1 HSPs)
scaffold0576 (125-256)||(5082-5214)
[»] chr7 (66 HSPs)
chr7 (125-256)||(2751340-2751472)
chr7 (125-256)||(22119957-22120089)
chr7 (125-256)||(40542910-40543042)
chr7 (125-256)||(7275346-7275478)
chr7 (125-256)||(21835220-21835352)
chr7 (127-256)||(23092167-23092297)
chr7 (125-256)||(17196950-17197082)
chr7 (125-256)||(29861739-29861871)
chr7 (125-256)||(654705-654836)
chr7 (125-256)||(7175862-7175994)
chr7 (125-256)||(16374063-16374195)
chr7 (125-256)||(18044176-18044308)
chr7 (125-256)||(11997918-11998050)
chr7 (125-256)||(22703555-22703687)
chr7 (139-256)||(3851840-3851958)
chr7 (125-256)||(21217833-21217965)
chr7 (119-256)||(23012508-23012646)
chr7 (136-256)||(36772303-36772424)
chr7 (125-256)||(2103124-2103254)
chr7 (125-256)||(10091257-10091388)
chr7 (133-256)||(42913513-42913637)
chr7 (128-256)||(27009431-27009561)
chr7 (125-256)||(41907514-41907645)
chr7 (127-256)||(28950942-28951072)
chr7 (125-256)||(2344368-2344500)
chr7 (125-255)||(22638361-22638488)
chr7 (125-256)||(27312221-27312353)
chr7 (119-249)||(17212116-17212247)
chr7 (139-256)||(31197673-31197791)
chr7 (123-255)||(9683893-9684026)
chr7 (125-256)||(9717987-9718119)
chr7 (128-256)||(28089888-28090020)
chr7 (125-256)||(31273983-31274114)
chr7 (125-256)||(39145652-39145784)
chr7 (131-255)||(19421306-19421431)
chr7 (171-256)||(31712902-31712987)
chr7 (135-233)||(21373789-21373888)
chr7 (119-255)||(32849654-32849791)
chr7 (125-252)||(43785303-43785431)
chr7 (130-256)||(33137825-33137951)
chr7 (125-256)||(28647038-28647170)
chr7 (129-256)||(22643342-22643470)
chr7 (133-256)||(27704079-27704202)
chr7 (127-256)||(23330739-23330869)
chr7 (171-256)||(25333519-25333603)
chr7 (128-256)||(21574102-21574231)
chr7 (125-256)||(13332434-13332555)
chr7 (119-256)||(22696383-22696522)
chr7 (158-248)||(8943409-8943500)
chr7 (169-256)||(25102809-25102895)
chr7 (133-255)||(35476418-35476541)
chr7 (125-251)||(1766149-1766275)
chr7 (205-256)||(36395496-36395547)
chr7 (119-256)||(9769649-9769785)
chr7 (211-256)||(22299958-22300003)
chr7 (201-254)||(30345511-30345564)
chr7 (167-256)||(38864446-38864535)
chr7 (125-192)||(6491676-6491744)
chr7 (125-192)||(14199730-14199798)
chr7 (125-183)||(42814933-42814992)
chr7 (190-256)||(17279666-17279732)
chr7 (168-246)||(47541496-47541574)
chr7 (125-188)||(7799900-7799964)
chr7 (175-225)||(40332193-40332243)
chr7 (204-256)||(7262364-7262416)
chr7 (125-153)||(22299918-22299946)
[»] chr6 (37 HSPs)
chr6 (125-256)||(15360098-15360230)
chr6 (125-256)||(34147411-34147543)
chr6 (125-256)||(34160027-34160159)
chr6 (125-256)||(654146-654278)
chr6 (125-256)||(3222636-3222767)
chr6 (125-256)||(11448936-11449068)
chr6 (125-255)||(9239040-9239171)
chr6 (125-256)||(1345000-1345132)
chr6 (133-256)||(21982321-21982444)
chr6 (125-256)||(21148511-21148642)
chr6 (125-256)||(12390490-12390619)
chr6 (125-256)||(28672132-28672264)
chr6 (139-256)||(9690638-9690756)
chr6 (120-256)||(17081054-17081191)
chr6 (125-256)||(5360071-5360203)
chr6 (129-256)||(9844007-9844135)
chr6 (139-256)||(11007244-11007362)
chr6 (125-256)||(9208317-9208449)
chr6 (125-256)||(11840966-11841097)
chr6 (176-256)||(14212999-14213079)
chr6 (157-256)||(15730495-15730594)
chr6 (119-254)||(10377774-10377911)
chr6 (125-256)||(33499540-33499672)
chr6 (125-254)||(17149458-17149588)
chr6 (168-256)||(14504082-14504170)
chr6 (178-247)||(33718478-33718547)
chr6 (125-188)||(12591702-12591766)
chr6 (168-256)||(17706319-17706407)
chr6 (170-256)||(21903619-21903706)
chr6 (130-256)||(17225737-17225863)
chr6 (139-220)||(28968078-28968160)
chr6 (224-256)||(7491666-7491698)
chr6 (191-242)||(27866217-27866268)
chr6 (169-248)||(28741849-28741928)
chr6 (222-256)||(4797260-4797294)
chr6 (194-255)||(32596211-32596271)
chr6 (119-155)||(13753299-13753335)
[»] chr5 (67 HSPs)
chr5 (119-256)||(8484661-8484799)
chr5 (125-256)||(27498731-27498863)
chr5 (127-256)||(19456211-19456340)
chr5 (125-256)||(11926501-11926634)
chr5 (125-256)||(15641106-15641237)
chr5 (125-256)||(18207272-18207404)
chr5 (125-256)||(32059440-32059572)
chr5 (125-256)||(38684273-38684404)
chr5 (125-256)||(7085626-7085758)
chr5 (125-256)||(30485893-30486025)
chr5 (129-256)||(35425082-35425210)
chr5 (125-256)||(33709503-33709633)
chr5 (125-256)||(4603842-4603974)
chr5 (125-256)||(34310207-34310339)
chr5 (136-256)||(23270522-23270643)
chr5 (125-256)||(10869565-10869697)
chr5 (129-251)||(11464913-11465035)
chr5 (131-256)||(6014280-6014406)
chr5 (124-256)||(5049201-5049333)
chr5 (167-256)||(22392796-22392885)
chr5 (133-256)||(27487554-27487679)
chr5 (125-256)||(37495112-37495251)
chr5 (125-256)||(31287946-31288078)
chr5 (125-256)||(19145412-19145543)
chr5 (139-256)||(9659311-9659429)
chr5 (178-256)||(22693054-22693132)
chr5 (162-256)||(41351104-41351197)
chr5 (125-256)||(12398448-12398580)
chr5 (125-248)||(13038463-13038586)
chr5 (125-248)||(13108458-13108581)
chr5 (125-256)||(21236362-21236494)
chr5 (125-256)||(26009264-26009396)
chr5 (146-256)||(34049897-34050008)
chr5 (158-256)||(13659245-13659343)
chr5 (119-256)||(10399832-10399971)
chr5 (125-256)||(25750613-25750741)
chr5 (187-256)||(38630979-38631048)
chr5 (129-247)||(42193554-42193671)
chr5 (131-256)||(12317155-12317276)
chr5 (125-248)||(36954883-36955007)
chr5 (129-227)||(15971151-15971250)
chr5 (205-256)||(10631289-10631340)
chr5 (119-256)||(31206301-31206440)
chr5 (129-193)||(25587001-25587066)
chr5 (125-256)||(36895490-36895622)
chr5 (125-208)||(15931124-15931207)
chr5 (190-245)||(5067392-5067447)
chr5 (158-256)||(28614486-28614583)
chr5 (138-256)||(15485291-15485411)
chr5 (133-256)||(930486-930608)
chr5 (209-256)||(7151453-7151500)
chr5 (171-256)||(24158166-24158251)
chr5 (168-256)||(8821093-8821181)
chr5 (129-256)||(41568869-41568996)
chr5 (168-256)||(42006843-42006930)
chr5 (173-256)||(25548534-25548617)
chr5 (210-252)||(3600002-3600044)
chr5 (199-256)||(33737882-33737938)
chr5 (199-256)||(41084123-41084180)
chr5 (202-249)||(15971096-15971143)
chr5 (128-256)||(10813851-10813980)
chr5 (134-231)||(16247026-16247124)
chr5 (159-256)||(21377249-21377346)
chr5 (125-165)||(38631052-38631093)
chr5 (220-256)||(9100302-9100338)
chr5 (200-256)||(10837437-10837493)
chr5 (130-256)||(22253144-22253272)
[»] chr8 (56 HSPs)
chr8 (125-256)||(3734623-3734755)
chr8 (125-256)||(4718714-4718846)
chr8 (125-256)||(34237655-34237787)
chr8 (125-256)||(8765526-8765658)
chr8 (125-256)||(21603299-21603431)
chr8 (125-256)||(39349325-39349457)
chr8 (125-255)||(15259407-15259538)
chr8 (125-256)||(2618255-2618387)
chr8 (125-255)||(28193543-28193674)
chr8 (125-256)||(32879348-32879480)
chr8 (119-256)||(42328067-42328205)
chr8 (125-256)||(6953008-6953139)
chr8 (125-256)||(20305977-20306109)
chr8 (125-256)||(21092610-21092742)
chr8 (125-256)||(4698723-4698855)
chr8 (125-256)||(34610687-34610819)
chr8 (125-256)||(42643118-42643250)
chr8 (119-256)||(19471672-19471811)
chr8 (119-256)||(19542596-19542735)
chr8 (119-256)||(19589961-19590100)
chr8 (125-256)||(14633023-14633155)
chr8 (125-256)||(25248418-25248547)
chr8 (125-256)||(264400-264531)
chr8 (125-256)||(651390-651521)
chr8 (125-256)||(837125-837256)
chr8 (168-256)||(2639411-2639499)
chr8 (125-256)||(18128582-18128714)
chr8 (125-256)||(10292124-10292255)
chr8 (125-256)||(20469986-20470117)
chr8 (125-256)||(27746335-27746467)
chr8 (125-256)||(28964102-28964233)
chr8 (125-247)||(28088355-28088478)
chr8 (125-256)||(1219418-1219550)
chr8 (125-256)||(18532176-18532299)
chr8 (133-237)||(21667627-21667731)
chr8 (139-256)||(24018465-24018584)
chr8 (125-215)||(24999303-24999394)
chr8 (135-256)||(2166776-2166897)
chr8 (125-256)||(33746951-33747083)
chr8 (129-255)||(7557952-7558071)
chr8 (119-249)||(26168856-26168986)
chr8 (125-256)||(3403502-3403634)
chr8 (120-256)||(9047279-9047415)
chr8 (134-249)||(13749133-13749250)
chr8 (129-249)||(36848757-36848877)
chr8 (170-251)||(43817754-43817835)
chr8 (119-256)||(28908886-28909025)
chr8 (210-256)||(9713609-9713655)
chr8 (125-256)||(34694575-34694708)
chr8 (210-256)||(5740383-5740429)
chr8 (194-256)||(16990722-16990784)
chr8 (225-256)||(10544925-10544956)
chr8 (205-256)||(33534567-33534618)
chr8 (127-256)||(34639208-34639337)
chr8 (187-248)||(36094816-36094877)
chr8 (192-256)||(20505689-20505753)
[»] chr4 (76 HSPs)
chr4 (125-256)||(34844758-34844890)
chr4 (125-256)||(40058852-40058984)
chr4 (125-255)||(52983684-52983815)
chr4 (125-256)||(27528795-27528927)
chr4 (119-256)||(32986256-32986394)
chr4 (125-256)||(34723864-34723996)
chr4 (119-256)||(54127342-54127480)
chr4 (125-256)||(5609202-5609334)
chr4 (119-254)||(20077986-20078122)
chr4 (119-256)||(33696279-33696417)
chr4 (125-256)||(20566415-20566547)
chr4 (125-256)||(32990500-32990632)
chr4 (125-256)||(45787704-45787836)
chr4 (126-256)||(46714459-46714590)
chr4 (119-256)||(19660532-19660670)
chr4 (125-256)||(44343579-44343711)
chr4 (125-256)||(25852279-25852412)
chr4 (125-247)||(9517650-9517773)
chr4 (125-256)||(36131510-36131642)
chr4 (123-255)||(13550271-13550404)
chr4 (125-256)||(13584254-13584386)
chr4 (125-256)||(49287923-49288054)
chr4 (119-256)||(12500059-12500196)
chr4 (125-256)||(21387487-21387617)
chr4 (125-256)||(18875517-18875648)
chr4 (129-256)||(55961754-55961881)
chr4 (138-256)||(27574396-27574515)
chr4 (139-256)||(22488028-22488146)
chr4 (136-256)||(35229243-35229365)
chr4 (125-256)||(35674749-35674873)
chr4 (125-256)||(51535678-51535818)
chr4 (132-256)||(51595094-51595219)
chr4 (125-255)||(25969504-25969632)
chr4 (125-251)||(32942435-32942562)
chr4 (138-256)||(53787057-53787177)
chr4 (125-234)||(13873317-13873427)
chr4 (125-206)||(33992691-33992773)
chr4 (125-256)||(1985901-1986031)
chr4 (167-256)||(4912034-4912123)
chr4 (125-256)||(34835594-34835726)
chr4 (125-256)||(7391965-7392095)
chr4 (120-255)||(20527035-20527170)
chr4 (193-256)||(23639758-23639821)
chr4 (193-256)||(23645416-23645479)
chr4 (119-256)||(30879166-30879303)
chr4 (194-256)||(52494623-52494685)
chr4 (190-256)||(55158343-55158409)
chr4 (180-256)||(4064981-4065057)
chr4 (180-256)||(9978509-9978585)
chr4 (125-256)||(12824465-12824597)
chr4 (125-256)||(13771482-13771615)
chr4 (188-256)||(43719087-43719155)
chr4 (167-256)||(4585713-4585800)
chr4 (125-256)||(13716450-13716582)
chr4 (199-256)||(17637852-17637908)
chr4 (125-220)||(22625097-22625202)
chr4 (199-256)||(23131436-23131493)
chr4 (168-255)||(9646217-9646304)
chr4 (182-256)||(13017836-13017909)
chr4 (214-256)||(33289209-33289251)
chr4 (199-256)||(37302627-37302684)
chr4 (171-255)||(42508382-42508466)
chr4 (133-206)||(29875825-29875899)
chr4 (199-256)||(7093511-7093568)
chr4 (119-191)||(10125879-10125952)
chr4 (129-256)||(28791184-28791311)
chr4 (224-256)||(24672305-24672337)
chr4 (205-256)||(8442050-8442101)
chr4 (218-256)||(6204181-6204219)
chr4 (130-255)||(24273292-24273418)
chr4 (170-255)||(45302947-45303032)
chr4 (218-256)||(46070246-46070284)
chr4 (168-256)||(3391446-3391534)
chr4 (203-255)||(21621680-21621732)
chr4 (224-252)||(42245840-42245868)
chr4 (196-256)||(43352339-43352399)
[»] chr2 (63 HSPs)
chr2 (125-256)||(44946053-44946185)
chr2 (125-256)||(35171865-35171997)
chr2 (119-256)||(11941210-11941348)
chr2 (125-256)||(15038024-15038156)
chr2 (125-256)||(33827573-33827705)
chr2 (125-256)||(30466830-30466962)
chr2 (125-256)||(24196069-24196199)
chr2 (133-256)||(28668946-28669070)
chr2 (125-249)||(36242319-36242444)
chr2 (130-256)||(3943810-3943937)
chr2 (140-256)||(34516414-34516530)
chr2 (125-256)||(25293231-25293356)
chr2 (125-256)||(43374330-43374457)
chr2 (134-256)||(27269344-27269467)
chr2 (125-256)||(2140486-2140615)
chr2 (125-256)||(17324831-17324961)
chr2 (125-256)||(41329908-41330039)
chr2 (125-237)||(44976172-44976286)
chr2 (125-256)||(8258962-8259094)
chr2 (125-256)||(13266555-13266686)
chr2 (129-256)||(36390569-36390696)
chr2 (125-256)||(41314057-41314188)
chr2 (138-256)||(714125-714244)
chr2 (119-256)||(19054084-19054223)
chr2 (125-256)||(5394082-5394214)
chr2 (126-256)||(1191579-1191710)
chr2 (129-256)||(4567429-4567565)
chr2 (125-234)||(10582014-10582122)
chr2 (125-256)||(27290653-27290771)
chr2 (159-256)||(44610139-44610236)
chr2 (125-249)||(45271449-45271574)
chr2 (182-256)||(14486948-14487022)
chr2 (125-256)||(8192352-8192483)
chr2 (167-256)||(31778139-31778228)
chr2 (179-256)||(44929846-44929923)
chr2 (189-256)||(18692090-18692157)
chr2 (170-249)||(45132398-45132477)
chr2 (178-256)||(4852649-4852726)
chr2 (170-256)||(9400961-9401047)
chr2 (190-256)||(18976455-18976521)
chr2 (139-256)||(19849912-19850029)
chr2 (158-247)||(4769265-4769354)
chr2 (125-256)||(19174828-19174959)
chr2 (125-252)||(5608038-5608166)
chr2 (119-249)||(23787012-23787146)
chr2 (171-256)||(6714295-6714380)
chr2 (192-256)||(39957891-39957955)
chr2 (202-256)||(1845049-1845103)
chr2 (182-256)||(28194138-28194212)
chr2 (129-256)||(29361622-29361745)
chr2 (210-256)||(1501464-1501509)
chr2 (130-256)||(14946849-14946975)
chr2 (127-231)||(18708544-18708649)
chr2 (177-237)||(32845194-32845254)
chr2 (124-256)||(40997358-40997483)
chr2 (211-256)||(8299859-8299904)
chr2 (120-256)||(29698207-29698343)
chr2 (125-158)||(32845156-32845189)
chr2 (210-256)||(12360296-12360342)
chr2 (191-256)||(13089012-13089077)
chr2 (203-256)||(13747500-13747553)
chr2 (199-256)||(19605846-19605903)
chr2 (194-254)||(10325030-10325090)
[»] chr1 (66 HSPs)
chr1 (125-256)||(4621237-4621369)
chr1 (125-256)||(24122088-24122220)
chr1 (125-256)||(24674458-24674590)
chr1 (125-256)||(7766727-7766859)
chr1 (125-256)||(15059402-15059534)
chr1 (130-256)||(8254752-8254879)
chr1 (125-255)||(17935834-17935965)
chr1 (119-256)||(30677235-30677373)
chr1 (125-256)||(7197247-7197378)
chr1 (125-256)||(9500355-9500487)
chr1 (125-254)||(8077712-8077841)
chr1 (129-252)||(1378967-1379090)
chr1 (125-256)||(7578474-7578606)
chr1 (125-256)||(46607875-46608007)
chr1 (125-256)||(27454864-27454998)
chr1 (125-256)||(23734181-23734314)
chr1 (125-256)||(23741373-23741506)
chr1 (125-256)||(45859043-45859175)
chr1 (119-255)||(34778401-34778535)
chr1 (125-256)||(32729610-32729741)
chr1 (125-256)||(36155888-36156020)
chr1 (125-251)||(18646918-18647045)
chr1 (139-248)||(8779744-8779854)
chr1 (133-256)||(45331621-45331746)
chr1 (125-256)||(168266-168398)
chr1 (167-256)||(22909979-22910068)
chr1 (160-256)||(48699859-48699956)
chr1 (125-255)||(37351454-37351593)
chr1 (125-251)||(21726794-21726921)
chr1 (119-256)||(2272403-2272541)
chr1 (167-256)||(26513148-26513236)
chr1 (125-256)||(18533724-18533856)
chr1 (125-256)||(33905510-33905642)
chr1 (125-227)||(7946909-7947011)
chr1 (129-251)||(32930818-32930941)
chr1 (174-256)||(50202661-50202742)
chr1 (158-256)||(26820286-26820384)
chr1 (119-230)||(2537757-2537864)
chr1 (158-227)||(12876965-12877034)
chr1 (125-256)||(1486483-1486617)
chr1 (125-243)||(16899568-16899687)
chr1 (210-256)||(14603947-14603993)
chr1 (187-256)||(23041650-23041719)
chr1 (129-248)||(40145889-40146014)
chr1 (125-217)||(23232300-23232397)
chr1 (119-256)||(16539667-16539804)
chr1 (125-231)||(29057363-29057469)
chr1 (189-256)||(35138118-35138185)
chr1 (210-256)||(5315482-5315528)
chr1 (186-256)||(27159212-27159282)
chr1 (158-256)||(40802069-40802166)
chr1 (180-256)||(6776201-6776277)
chr1 (168-256)||(9926146-9926234)
chr1 (194-256)||(809357-809419)
chr1 (168-256)||(52135234-52135323)
chr1 (190-246)||(43769975-43770031)
chr1 (158-256)||(1818808-1818905)
chr1 (125-248)||(25236997-25237121)
chr1 (131-247)||(1095013-1095129)
chr1 (119-153)||(39964571-39964605)
chr1 (125-158)||(46113501-46113534)
chr1 (124-231)||(20999188-20999296)
chr1 (168-256)||(31162859-31162947)
chr1 (172-255)||(36921513-36921596)
chr1 (168-256)||(39714650-39714738)
chr1 (180-256)||(47091742-47091818)
[»] chr3 (76 HSPs)
chr3 (119-256)||(10190742-10190880)
chr3 (125-256)||(8456150-8456282)
chr3 (125-256)||(35492976-35493108)
chr3 (125-256)||(40133449-40133581)
chr3 (125-256)||(49258262-49258394)
chr3 (119-256)||(10083819-10083957)
chr3 (125-256)||(18176887-18177019)
chr3 (125-256)||(45272416-45272548)
chr3 (125-256)||(46576413-46576545)
chr3 (125-256)||(8097279-8097411)
chr3 (125-256)||(15566500-15566631)
chr3 (125-256)||(25289715-25289846)
chr3 (129-256)||(26174182-26174310)
chr3 (125-256)||(32151489-32151621)
chr3 (125-256)||(39041852-39041984)
chr3 (125-256)||(52821636-52821767)
chr3 (125-256)||(53233911-53234042)
chr3 (125-256)||(30807153-30807285)
chr3 (125-256)||(21363008-21363140)
chr3 (125-256)||(30257689-30257821)
chr3 (125-256)||(45529755-45529886)
chr3 (125-256)||(48977453-48977585)
chr3 (125-255)||(25379826-25379957)
chr3 (125-256)||(53424177-53424308)
chr3 (125-256)||(24407326-24407458)
chr3 (125-256)||(34492575-34492707)
chr3 (120-256)||(31537838-31537975)
chr3 (125-256)||(33398468-33398600)
chr3 (125-256)||(52455649-52455781)
chr3 (125-256)||(2511297-2511429)
chr3 (158-256)||(24165715-24165812)
chr3 (125-256)||(40940890-40941022)
chr3 (158-256)||(54475780-54475878)
chr3 (129-256)||(8958035-8958164)
chr3 (139-256)||(1692913-1693030)
chr3 (165-255)||(48104983-48105073)
chr3 (125-208)||(26108357-26108441)
chr3 (125-256)||(53288713-53288844)
chr3 (132-256)||(1178244-1178367)
chr3 (125-256)||(1242038-1242174)
chr3 (119-256)||(25344058-25344195)
chr3 (125-256)||(7485531-7485657)
chr3 (125-256)||(4462698-4462829)
chr3 (131-238)||(29915288-29915395)
chr3 (131-238)||(29964441-29964548)
chr3 (168-256)||(33698706-33698794)
chr3 (189-256)||(53848434-53848501)
chr3 (119-256)||(11390661-11390799)
chr3 (170-248)||(55371302-55371380)
chr3 (136-256)||(51532865-51532986)
chr3 (125-228)||(7470244-7470347)
chr3 (119-256)||(17579135-17579274)
chr3 (119-251)||(26158877-26159003)
chr3 (125-247)||(19857116-19857239)
chr3 (125-256)||(48972714-48972843)
chr3 (185-256)||(50731237-50731308)
chr3 (185-256)||(50781546-50781617)
chr3 (210-256)||(3747732-3747778)
chr3 (194-256)||(4048085-4048147)
chr3 (158-255)||(21776514-21776611)
chr3 (125-249)||(49167121-49167249)
chr3 (135-256)||(6041670-6041794)
chr3 (189-248)||(4252404-4252463)
chr3 (170-256)||(7195918-7196004)
chr3 (190-256)||(25017620-25017685)
chr3 (137-241)||(14343304-14343408)
chr3 (172-256)||(32094757-32094841)
chr3 (168-255)||(6127562-6127648)
chr3 (204-256)||(14997755-14997807)
chr3 (137-231)||(34844455-34844549)
chr3 (222-256)||(26108441-26108475)
chr3 (181-251)||(32414581-32414651)
chr3 (210-256)||(39890606-39890652)
chr3 (199-256)||(51390133-51390190)
chr3 (203-256)||(55287929-55287982)
chr3 (186-230)||(33793579-33793623)
[»] scaffold0102 (1 HSPs)
scaffold0102 (125-256)||(39157-39289)
[»] scaffold0070 (1 HSPs)
scaffold0070 (125-256)||(40390-40521)
[»] scaffold0217 (1 HSPs)
scaffold0217 (125-256)||(7309-7441)
[»] scaffold0019 (1 HSPs)
scaffold0019 (125-256)||(161874-162006)
[»] scaffold0623 (1 HSPs)
scaffold0623 (125-256)||(1057-1188)
[»] scaffold0366 (2 HSPs)
scaffold0366 (125-256)||(9300-9431)
scaffold0366 (129-256)||(12001-12128)
[»] scaffold0051 (1 HSPs)
scaffold0051 (125-256)||(52871-53003)
[»] scaffold0026 (2 HSPs)
scaffold0026 (125-256)||(97366-97498)
scaffold0026 (219-255)||(2478-2514)
[»] scaffold0016 (1 HSPs)
scaffold0016 (129-256)||(32357-32484)
[»] scaffold0049 (1 HSPs)
scaffold0049 (125-256)||(66827-66951)
[»] scaffold1175 (1 HSPs)
scaffold1175 (148-256)||(2426-2535)
[»] scaffold0068 (1 HSPs)
scaffold0068 (125-256)||(41645-41776)
[»] scaffold0157 (1 HSPs)
scaffold0157 (119-256)||(20281-20418)
[»] scaffold0459 (1 HSPs)
scaffold0459 (129-256)||(10695-10821)
[»] scaffold0199 (1 HSPs)
scaffold0199 (194-256)||(8451-8513)
[»] scaffold0160 (1 HSPs)
scaffold0160 (125-256)||(29143-29274)
[»] scaffold0717 (1 HSPs)
scaffold0717 (125-213)||(1-90)
[»] scaffold0028 (1 HSPs)
scaffold0028 (192-255)||(27903-27966)
[»] scaffold0200 (1 HSPs)
scaffold0200 (203-249)||(26609-26655)
[»] scaffold0020 (1 HSPs)
scaffold0020 (204-256)||(123066-123117)
[»] scaffold0171 (1 HSPs)
scaffold0171 (168-256)||(11420-11508)
[»] scaffold0008 (1 HSPs)
scaffold0008 (220-256)||(265880-265915)


Alignment Details
Target: scaffold0328 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 19 - 322
Target Start/End: Complemental strand, 13282 - 12974
Alignment:
Q  19 agaggtaattaataataacaatctttagccttattttaattcattaagccgtttaaagcttaacttattcccattgtaacccatttggggttgatctagt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  13282 agaggtaattaataataacaatctttagccttattttaattcattaagccgtttaaatcttaacttattctcattgtaacccatttggggttgacctagt 13183  T
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||  ||||||||||||||||||||||||||| ||||| |||||||| ||||||    ||||||||||||||||||||| ||| |||||| |||| |||    
T  13182 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgct---actttaaacggggcccccgcaagtggacggtgggattgatcc 13086  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt-------nnnnnnnnnnncttattctcattgttaaacaggtaaaagatttctggcctagat 310  Q
    |||| ||||||| ||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||    
T  13085 cctcagattagttgattcttggatcggataccgagttttaaaaaaaaaaaaaaaaaacttattctcattgttaaacaggtaaaagatttctggcctagat 12986  T
Q  311 actggggtggtg 322  Q
    ||||||||||||    
T  12985 actggggtggtg 12974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 15050 - 15178
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    |||| ||||||||||||||| |||||||||||| |||||| || |||| ||||||||||||||||| ||| ||||||||| ||||||| ||| ||||||     
T  15050 ggttcaattccctctggtgctaatttcggtgggttaagtccatccagagcttgctctggctttaaatgggccccccgcaagtgggcggggga-ttggtct 15148  T
Q  218 cctcggattagtcgattcttggatcggata 247  Q
    ||||||||||||| ||||||||||||||||    
T  15149 cctcggattagtcaattcttggatcggata 15178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 5214 - 5082
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5214 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcgg 5115  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  5114 attagtcgattcttggatcggataccgagtttt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 2751340 - 2751472
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2751340 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcgg 2751439  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  2751440 attagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 22119957 - 22120089
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22119957 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 22120056  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  22120057 attagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 40543042 - 40542910
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  40543042 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 40542943  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  40542942 attagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 7275346 - 7275478
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  7275346 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcgg 7275445  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  7275446 attagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 21835220 - 21835352
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21835220 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 21835319  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||| ||||||||    
T  21835320 attagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 23092167 - 23092297
Alignment:
Q  127 tccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggat 23092266  T
Q  226 tagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| ||||||||||||||||||||    
T  23092267 tagtcgattcatggatcggataccgagtttt 23092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 17197082 - 17196950
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  17197082 attccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcga 17196983  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  17196982 attagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 29861739 - 29861871
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||     
T  29861739 attccctctggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcga 29861838  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  29861839 attagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 654836 - 654705
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  654836 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccgcaagtgggcggtgggattggtcccctcgg 654738  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||||||||||||||||||||||    
T  654737 attagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7175994 - 7175862
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||| |||||||||| ||||||||||||||    
T  7175994 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacaggacccccgcaagtgggcggtgggattggtcccctcgg 7175895  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||| |||||||    
T  7175894 attagtcgattcttggatcggatactgagtttt 7175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 16374063 - 16374195
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  16374063 attccctctggtgccaatttcggtgggttaagtccatacagaatttgctatggctttaaacgggacccccgcaaatggacggtgggattggtcccctcgg 16374162  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  16374163 attagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 18044176 - 18044308
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| |    
T  18044176 attccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggtggtggaattggtcccctcag 18044275  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  18044276 attagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 11997918 - 11998050
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||| |||||||||||| |||||||||| |||||||||||||     
T  11997918 attccctctggtgccaatttcggttggctaagtccatacatagcttgctctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcga 11998017  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  11998018 attagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 22703555 - 22703687
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  22703555 attccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgg 22703654  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||| ||||||    
T  22703655 attagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 3851840 - 3851958
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  3851840 caatttcggtgggctaagtccatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt 3851939  T
Q  238 ggatcggataccgagtttt 256  Q
    |||||||||||||||||||    
T  3851940 ggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 21217965 - 21217833
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||| ||| |||||||||| |||| |||||||||    
T  21217965 attccctctgatgccaatttcggtgggctaagtccatacagagcttgctctagctttaaacgggccccccacaagtgggcggtgggattgatcccctcgg 21217866  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||||||||||||||||||||||||||    
T  21217865 attagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 23012646 - 23012508
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||| |||||||||| ||||||||    
T  23012646 ggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccacaagtgggcggtgggattggtcc 23012547  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||||||| |||| | ||||||||||||||||||    
T  23012546 cctcgtattagtcaattcattgatcggataccgagtttt 23012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 256
Target Start/End: Complemental strand, 36772424 - 36772303
Alignment:
Q  136 tgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgatt 234  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  | |||||||||||||| |||| ||||||||||||||||    
T  36772424 tgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgatt 36772325  T
Q  235 cttggatcggataccgagtttt 256  Q
    ||| ||||||||||||||||||    
T  36772324 ctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 2103124 - 2103254
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||    
T  2103124 attccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgggattggt-ccctcgg 2103222  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| | ||||||||||||||||||    
T  2103223 attagtcgattcat-gatcggataccgagtttt 2103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 10091257 - 10091388
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||| |||||||||| |||| |||||||||    
T  10091257 attccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcgg 10091356  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| |||| |||||||||||||    
T  10091357 attagtcgattctt-gatccgataccgagtttt 10091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 42913637 - 42913513
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    |||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| |    
T  42913637 tggtgccaatttcgatgggataagtccatacggaacttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttg 42913538  T
Q  232 attcttggatcggataccgagtttt 256  Q
    |||||| ||||||||||||||||||    
T  42913537 attcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 256
Target Start/End: Original strand, 27009431 - 27009561
Alignment:
Q  128 ccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaa-tgggcggtggaattggtcccctcggat 225  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||| ||| |||||| ||||||||||||  ||    
T  27009431 ccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaat 27009530  T
Q  226 tagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| ||||||||||||||    
T  27009531 tagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 41907645 - 41907514
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||||||||||||||| |||||||||||| |||||||  |||||||||||||||||| ||||||||||| |||| ||||| |||||||||| | |    
T  41907645 attctctctggtgccaatttcagtgggctaagtccatacagaggttgctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcccc-cag 41907547  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  41907546 attagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 28950942 - 28951072
Alignment:
Q  127 tccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||| ||||| | |||||||| ||||||||||||| |     
T  28950942 tccctctggtgccaatttcggtgggctaagttcatatagagcttgctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaac 28951041  T
Q  226 tagtcgattcttggatcggataccgagtttt 256  Q
    ||| | |||||||||||||||||||||||||    
T  28951042 tagacaattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 2344368 - 2344500
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| |||  | |||||||||||||| ||||||||| || ||||||| ||||||||||||||    
T  2344368 attccttctggtgccaattttggtgggctaagtccatacagagctttttttggctttaaacgggacccccgcaagtgagcggtgggattggtcccctcgg 2344467  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||||||||||||||||||||||    
T  2344468 attagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 22638361 - 22638488
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    |||||||||||||| |||||||||||| |||||    |||| |||||||||||||||||||||||| |||||| |||||||||| |||| || ||||| |    
T  22638361 attccctctggtgctaatttcggtgggttaagtt---cagagcttgctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaa 22638457  T
Q  225 ttagtcgattcttggatcggataccgagttt 255  Q
    |||||||||||||||||||||||||||||||    
T  22638458 ttagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 27312221 - 27312353
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||| || || ||||| ||||||| ||  ||||| |||||||||| |||||||||| |||||||||| |||||||||||| |    
T  27312221 attccctctagtgccaatttcgatgtgccaagtccatacagagctacctctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctcag 27312320  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  27312321 attagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 17212116 - 17212247
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||| |||| |||| || | ||||| ||||||||    
T  17212116 ggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctctggcttaaaacgggacccctgcaagtgagtggtgggattggtcc 17212215  T
Q  218 cctcggattagtcgattcttggatcggatacc 249  Q
    ||||||||||||||||||||||||| ||||||    
T  17212216 cctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 31197673 - 31197791
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    ||||||||||||  |||||| ||||||| |||||||| |||||||||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||    
T  31197673 caatttcggtggattaagtccatacagatcttgctcttgctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattctt 31197772  T
Q  238 ggatcggataccgagtttt 256  Q
    |||||||||| ||||||||    
T  31197773 ggatcggatatcgagtttt 31197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 9683893 - 9684026
Alignment:
Q  123 taattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctc 221  Q
    ||||||||||| |||||||||||||||||||||||| |||| || ||| |||||||||||||||||| |||| ||| |||||||| | || |||||||||    
T  9683893 taattccctctagtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctc 9683992  T
Q  222 ggattagtcgattcttggatcggataccgagttt 255  Q
    |||||| |||||||||||||||  ||||||||||    
T  9683993 ggattaatcgattcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 9718119 - 9717987
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||     
T  9718119 attccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcga 9718020  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||| |||| |||| |||||||    
T  9718019 attagtcggttcttgaatcgaatactgagtttt 9717987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 256
Target Start/End: Original strand, 28089888 - 28090020
Alignment:
Q  128 ccctctggtgccaatttcggtgggctaagtc-ataca----gaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||| |||||||||||||||||||| |||||    || ||||||||||||||||| ||| ||||||||| |||||| ||  |||||||||||||    
T  28089888 ccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctctggctttaaatggg-cccccgcaagtgggcgatgagattggtcccctcg 28089986  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||||    
T  28089987 gattagtcgattcttggatcggataccgagtttt 28090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 31273983 - 31274114
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| || |||||||| |||||||||| ||||||| ||||||||||||||||||||||| || |||| ||||| |||  |||||||||||||     
T  31273983 attccctctggagctaatttcggcgggctaagtccatacagagcttgctctggctttaaacggggctcc-gcaagtgggcagtgagattggtcccctcga 31274081  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||| |||||||||||||||    
T  31274082 attagtcgattcttggaccggataccgagtttt 31274114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 39145784 - 39145652
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcat--acagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||| |||||||||||||||||||||||||||   ||||| ||||||||||||||||||||| |||| |||| ||| |||||| |||||||||||||    
T  39145784 attccctgtggtgccaatttcggtgggctaagtcaataacagagcttgctctggctttaaacggg-cccctgcaagtggacggtgggattggtcccctcg 39145686  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     ||||||||||||||| ||| |||||| ||||||    
T  39145685 aattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 255
Target Start/End: Original strand, 19421306 - 19421431
Alignment:
Q  131 tctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagt 229  Q
    ||||||| |||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||| ||| ||| |||||||||| ||||||| ||||||||||||    
T  19421306 tctggtgtcaatttcgatgggctaagtccatacagagcttgctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagt 19421405  T
Q  230 cgattcttggatcggataccgagttt 255  Q
    ||||||||| ||| ||||||||||||    
T  19421406 cgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 31712987 - 31712902
Alignment:
Q  171 ctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| |||| ||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31712987 ctctggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 21373789 - 21373888
Alignment:
Q  135 gtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgat 233  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||  |||||||| | |||||||||||||    
T  21373789 gtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcgat 21373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 119 - 255
Target Start/End: Original strand, 32849654 - 32849791
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||||| ||  |||||| ||||||||||||| | || || ||||||||||||||||| ||| | |||  || ||||| |||| ||||||||    
T  32849654 ggtttgattccctctagtctcaattttggtgggctaagtccacactgagcttgctctggctttaaatgggactcccataagtgggcagtgggattggtcc 32849753  T
Q  218 cctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||| |||||||||||||||||||||||||||||||||    
T  32849754 cctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 43785431 - 43785303
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||| || |||| |||||| |||| ||||||| ||||||| ||| |||||| ||||||||||||| |||||| ||| |||||  ||||||||||| ||    
T  43785431 attcccacttgtgctaatttcagtggactaagtccatacagagcttactctggttttaaacggggcctccgcaagtggacggtgagattggtccccttgg 43785332  T
Q  224 attagtcgattcttggatcggataccgag 252  Q
    ||||||||||| |||||||||||||||||    
T  43785331 attagtcgatttttggatcggataccgag 43785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 33137951 - 33137825
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattag 228  Q
    |||||||| ||||||  |||||||||||| ||||||| || ||||| |||||||| |||||||  |||| ||||||||| |||||||||||||| |||||    
T  33137951 ctctggtgtcaattttagtgggctaagtccatacagagctcgctctagctttaaatggggccct-gcaagtgggcggtgaaattggtcccctcgaattag 33137853  T
Q  229 tcgattcttggatcggataccgagtttt 256  Q
    ||||||||| ||||||||| ||||||||    
T  33137852 tcgattcttagatcggatatcgagtttt 33137825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 28647038 - 28647170
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtca-tacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||||||||||||| |||||| ||||||  || ||||||||||  |||||||||||| ||| |||||||||| |||||| ||||||    
T  28647038 attccctctggtgccaatttcggtgggc-aagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattggttccctcg 28647136  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||  | ||||||||||||| ||||||||    
T  28647137 aattagtctgtccttggatcggatatcgagtttt 28647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 22643470 - 22643342
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||| || |||||||||| ||||||||| ||||||| ||||||||| |||||||||| |||| ||||| ||| |||||  ||| ||||||||||||||    
T  22643470 cctctgatgtcaatttcggtaggctaagtccatacagagcttgctctgactttaaacggagccctcgcaagtggccggtgtgattagtcccctcggatta 22643371  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
     ||||||||| |||| |||||| ||||||    
T  22643370 atcgattctttgatcagataccaagtttt 22643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 27704079 - 27704202
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    |||||||||||||||||||||||||| ||| ||| |||||| |||||||||| ||  ||||||||| |||| ||||  |||| ||||||| |||||||||    
T  27704079 tggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatgga-cccccgcaagtgggtggtgtgattgatcccctcagattagtcg 27704177  T
Q  232 attcttggatcggataccgagtttt 256  Q
    ||||||| ||| |||||||||||||    
T  27704178 attcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 23330869 - 23330739
Alignment:
Q  127 tccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    |||||| ||||||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||| || |||||| ||||||||   ||||||||||||  |    
T  23330869 tccctccggtgccaatttcggtgggc-aagtccatacagagctttgctctggcttaaaacgggacctccgcaagtgggcggtaagattggtcccctcaaa 23330771  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    |||||| || ||||||||||||||||||||||    
T  23330770 ttagtcaatccttggatcggataccgagtttt 23330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 25333519 - 25333603
Alignment:
Q  171 ctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| |||||||| || ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  25333519 ctctgactttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 256
Target Start/End: Complemental strand, 21574231 - 21574102
Alignment:
Q  128 ccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    |||| ||||||||| |||||||||| ||||| ||||||| ||| || | |||||  |||||||||||| ||| | |||||||  ||||||||||||||||    
T  21574231 ccctttggtgccaacttcggtgggc-aagtccatacagagctttgcccaggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggat 21574133  T
Q  226 tagtcgattcttggatcggataccgagtttt 256  Q
    |||||| | ||||||||||||||||||||||    
T  21574132 tagtcggtccttggatcggataccgagtttt 21574102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 13332555 - 13332434
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||| ||  |||||||| ||| |         ||||| |||||    
T  13332555 attccctctggagccaatttcggtgggctaagtccatacagagcttactctggctttaaacagg--ccccgcaagtggcc---------ggtccactcgg 13332467  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||| |||||||||||||    
T  13332466 attagtcgattcttggatcagataccgagtttt 13332434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 22696383 - 22696522
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgc--aaatgggcggtggaattggt 215  Q
    ||||| |||||||||||||||||||||||||||  |   |||||||| ||| ||||||||||  |||| |||||||||  || | ||||| || ||||||    
T  22696383 ggtttgattccctctggtgccaatttcggtgggg-actccatacagagctttgctctggcttagaacgaggcccccgcgcaagtaggcggcgggattggt 22696481  T
Q  216 cccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    || ||||||||||||| | ||||||||||||||||||||||    
T  22696482 cctctcggattagtcggtccttggatcggataccgagtttt 22696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 8943500 - 8943409
Alignment:
Q  158 catacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggatac 248  Q
    |||||||| |||| ||||| |||||||||| ||||| |||| |||||||||  ||||||||||| | |||||||||||||||||||||||||    
T  8943500 catacagagcttggtctggttttaaacgggcccccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatac 8943409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 25102895 - 25102809
Alignment:
Q  169 tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| |||||||||||| ||  |||||| |||||| || ||||||||||||||||||||||| |||||||| ||||    
T  25102895 tgctctggctttaaacagggcccccgcaagtga-cggtgggattggttccttcggattagtcgattcttggatcagataccgattttt 25102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 255
Target Start/End: Original strand, 35476418 - 35476541
Alignment:
Q  133 tggtgccaatttcggtgggctaagt-catacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtc 230  Q
    |||||||||||| |||||| ||||| |||||||| ||| ||||||||||  |||||| |||| |||||||  |||||||||||||| ||| |||||||||    
T  35476418 tggtgccaattttggtggg-taagttcatacagagctttgctctggcttagaacgggacccctgcaaatgaccggtggaattggtctccttggattagtc 35476516  T
Q  231 gattcttggatcggataccgagttt 255  Q
    | |  || |||||||||||||||||    
T  35476517 ggtctttagatcggataccgagttt 35476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 1766275 - 1766149
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||| | ||| ||||||||||||| |||||| ||||||||||| ||  ||||||  |||||||||||  ||| |||||||| | |||||||||||||    
T  1766275 attcccttttgtgtcaatttcggtggg-taagtccatacagaactttgccttggcttagaacggggcccca-caagtgggcggttggattggtcccctcg 1766178  T
Q  223 gattagtcgattcttggatcggataccga 251  Q
    ||||||||| | |||| ||||||||||||    
T  1766177 gattagtcggtacttgaatcggataccga 1766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 36395496 - 36395547
Alignment:
Q  205 gtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  36395496 gtggaattggtcctctcggattagtcgattcttggattggataccgaatttt 36395547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 9769649 - 9769785
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    ||||| |||| ||||| || ||||||| |||||| |  |||| |||| |||| |||| |||  |||||||||||||||||| | |||||| |||||||||    
T  9769649 ggtttgattctctctgatgtcaatttcagtgggcaagttcattcagagcttgttctgtcttagaacggggcccccgcaaat-gacggtgggattggtccc 9769747  T
Q  219 ctcggattagtcgattcttggatcggataccgagtttt 256  Q
    || | |||||||| | |||| | || ||||||||||||    
T  9769748 cttgaattagtcggtccttgaaccgaataccgagtttt 9769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 22299958 - 22300003
Alignment:
Q  211 ttggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    
T  22299958 ttggtcctctcggattagtcgattcttgaatcggataccgagtttt 22300003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  201 ggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtt 254  Q
    |||||||| |||||||||||||| ||||||| ||||| ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 38864535 - 38864446
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| ||||||||||   ||| |||||||| |||||  |||||||| |||| ||||||| |||||||||||||||| ||| ||||    
T  38864535 cttgctctgactttaaacggaatccctgcaaatggacggtgatattggtcctctcgaattagtcaattcttggatcggatatcgaatttt 38864446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 6491676 - 6491744
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccc 192  Q
    ||||||||||||| |||||||| |||||||| | |||||||| |||||| ||||||||||||| |||||    
T  6491676 attccctctggtgtcaatttcgatgggctaaattcatacagagcttgctttggctttaaacggtgcccc 6491744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 14199798 - 14199730
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccc 192  Q
    |||||||||  ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||||    
T  14199798 attccctctaatgccaattttggtgggctaagtctatatagagcttgctctgcctttaaacggggcccc 14199730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 42814933 - 42814992
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaa 183  Q
    ||||||||||||| ||||||||||||||||||| |||||| | ||||||||| |||||||    
T  42814933 attccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctgactttaaa 42814992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 17279666 - 17279732
Alignment:
Q  190 ccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| || |||||| ||||||||||||  |||||||| |  |||||||||||||||||||||    
T  17279666 ccccgcaaacggacggtgggattggtcccctcaaattagtcggtctttggatcggataccgagtttt 17279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 47541496 - 47541574
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggat 246  Q
    ||||| ||||||  |||||| ||||||||| ||| | ||||||||||||||||  ||||||||||| ||| ||||||||    
T  47541496 ttgctttggcttagaacgggccccccgcaagtggacagtggaattggtccccttagattagtcgatccttagatcggat 47541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 7799964 - 7799900
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacgggg 188  Q
    ||||||||||||||||||||| ||||| ||||| |||| ||| |||||| |||||||||| ||||    
T  7799964 attccctctggtgccaatttcagtgggttaagtccatagagagcttgctatggctttaaatgggg 7799900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 40332193 - 40332243
Alignment:
Q  175 ggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    ||||||| |||||||| || ||| |||||||||| ||||||||||||||||    
T  40332193 ggctttagacggggcctccacaagtgggcggtgggattggtcccctcggat 40332243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 7262364 - 7262416
Alignment:
Q  204 ggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||||||||||||| ||||||||   |||| |||||||||||||||||    
T  7262364 ggtgggattggtcccctcgaattagtcggcccttgaatcggataccgagtttt 7262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 22299918 - 22299946
Alignment:
Q  125 attccctctggtgccaatttcggtgggct 153  Q
    |||||||||||||||||||||||||||||    
T  22299918 attccctctggtgccaatttcggtgggct 22299946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 15360230 - 15360098
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15360230 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcgg 15360131  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  15360130 attagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 34147411 - 34147543
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  34147411 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcgg 34147510  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  34147511 attagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 34160027 - 34160159
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  34160027 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcgg 34160126  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  34160127 attagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 654278 - 654146
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  654278 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcgg 654179  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||||||||||||||||||||    
T  654178 attagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 3222767 - 3222636
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |||| |||||||||| ||||||||||||||    
T  3222767 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaaacggggcccc-gcaagtgggcggtgggattggtcccctcgg 3222669  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  3222668 attagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 11448936 - 11449068
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11448936 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 11449035  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||| ||||||||    
T  11449036 attagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 9239040 - 9239171
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||| |||||| ||| ||| |||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  9239040 attccctctggtgccaatttcggtgggttaagtccatatagagcttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtcccctcgg 9239139  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  9239140 attagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 1345000 - 1345132
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| ||    
T  1345000 attccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgggccccccgcaagtggacggtgggattggtccccttgg 1345099  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  1345100 attagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 21982444 - 21982321
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  21982444 tggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcg 21982346  T
Q  232 attcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||    
T  21982345 attcttggatcggataccgagtttt 21982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 21148642 - 21148511
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||| |||| |||||||||| ||||||||||||||    
T  21148642 attccctctagtgccaatttcgatgggctaagtccatacagagcttgctctgactttaaacggggcccc-gcaagtgggcggtgggattggtcccctcgg 21148544  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  21148543 attagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 12390490 - 12390619
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  12390490 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcgg 12390589  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||     |||||||||||||||||    
T  12390590 attagtcgattaa---atcggataccgagtttt 12390619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 28672132 - 28672264
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||| ||||||||||||| ||||||| |||| | |||||||||||||| ||| ||||| |||||||||| ||||||||||||||    
T  28672132 attccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcgg 28672231  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||| |||||||||||||    
T  28672232 attagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 9690756 - 9690638
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| | ||| ||| |||||| |||||||| |||||||||||||||||||    
T  9690756 caatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattctt 9690657  T
Q  238 ggatcggataccgagtttt 256  Q
    |||||||||||||||||||    
T  9690656 ggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 17081191 - 17081054
Alignment:
Q  120 gtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  17081191 gtttgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtccc 17081092  T
Q  219 ctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| || ||| | ||||||||||| ||||||||||||    
T  17081091 ctcgaataagttgtttcttggatcgaataccgagtttt 17081054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 5360203 - 5360071
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||  ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||  ||||| ||| |||||||||| |||||||||||||     
T  5360203 attccctctaatgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcga 5360104  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  5360103 attagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 9844007 - 9844135
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||||| |||||| |||||| |||||| ||||||| |||| |||||||||||||||||||||| ||| |||||||||  ||||||||| ||||||||    
T  9844007 cctctggtgtcaattttggtgggttaagtccatacagagcttgttctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggatta 9844106  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||| ||||||||    
T  9844107 gtcgattcttggatcggatatcgagtttt 9844135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 11007244 - 11007362
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||||||||||| ||||| | |||||||| ||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||    
T  11007244 caatttcggtgggctaagtccatacaaagcttgctctagctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctt 11007343  T
Q  238 ggatcggataccgagtttt 256  Q
     ||||||||||| ||||||    
T  11007344 tgatcggatacctagtttt 11007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 9208317 - 9208449
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||| ||||||||||||||||||||| ||||| ||||||| | ||||| |||||||||| ||||||||||||| |||||||||| ||||||| ||||     
T  9208317 attccccctggtgccaatttcggtgggc-aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattggtctcctca 9208415  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    || |||||||||||||||||  ||||||||||||    
T  9208416 gaatagtcgattcttggatcaaataccgagtttt 9208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 11840966 - 11841097
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||| |||||| ||||| | |||||| ||| |||||||||||||||   || ||| |||||| ||| |||||||||     
T  11840966 attccctctggtgccaatttcggtgggttaagtccatacaaagcttgctttggttttaaacggggccccat-aagtggacggtgggattagtcccctcga 11841064  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||||||||||||||||||||    
T  11841065 attagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 14212999 - 14213079
Alignment:
Q  176 gctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||| |||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  14212999 gctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 14213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 15730594 - 15730495
Alignment:
Q  157 tcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||| |||||||||||||| ||||||| ||  |||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  15730594 tcatacagagcttgttctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 254
Target Start/End: Original strand, 10377774 - 10377911
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccg-caaatgggcggtggaattggt 215  Q
    |||| |||||||| |||||||||||||||||||| ||||| ||||| | ||| |||||| ||| |||||||||||||  ||| |||||||||| ||||||    
T  10377774 ggttcaattccctatggtgccaatttcggtgggc-aagtccatacatagctttgctctgacttaaaacggggccccccacaagtgggcggtggcattggt 10377872  T
Q  216 cccctcggattagtcgattcttggatcggataccgagtt 254  Q
    ||||||||| |||||| | ||||||| ||||||||||||    
T  10377873 cccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 33499540 - 33499672
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| ||||||||||||||||   |||||| | ||| ||| |||||||||| ||| || || ||| |||||||||| ||||||||||||||    
T  33499540 attccctctggtgtcaatttcggtgggctagtccatacaaatctttgctttggctttaaatgggccctccacaagtgggcggtgggattggtcccctcgg 33499639  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||  ||  |||| |||||||||||||||    
T  33499640 attagtcagttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 17149588 - 17149458
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||| ||||||||| ||| ||||| ||||||| | ||||| |||||||||| ||||||||||||| ||  |||||| |||||||||||||    
T  17149588 attccctctggtgctaatttcggttggc-aagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattggtcccctcg 17149490  T
Q  223 gattagtcgattcttggatcggataccgagtt 254  Q
     |||||||| | |||| ||| |||||||||||    
T  17149489 aattagtcggtccttgaatcagataccgagtt 17149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 14504170 - 14504082
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||||| |||| |||||||| |||||||||| |||| ||| |||| |||||||||| |||| |||||||||||||||||    
T  14504170 ttgctctggttttaaatggggtccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 33718547 - 33718478
Alignment:
Q  178 tttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggata 247  Q
    ||||||||||||| | |||| ||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  33718547 tttaaacggggcctctgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 12591702 - 12591766
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacgggg 188  Q
    ||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  12591702 attccctctcgtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgggg 12591766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 17706407 - 17706319
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||| |||||| ||||| ||| |||||  ||||||  |||||||| |||| |||||||||||||||||||| ||||    
T  17706407 ttgctctggctttaaactgggccctcgcaagtggacggtgtgattggtttcctcggataagtcaattcttggatcggataccgaatttt 17706319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 21903706 - 21903619
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccc-tcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||| || |||| |||||||||| | |||||||| || |||||||||||||||||||||||| | |||||||    
T  21903706 gctctggctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggatgcagagtttt 21903619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 17225737 - 17225863
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||||||||||||||| |||| ||||| ||||||| ||| ||||| | ||  ||||||||||| ||||||||||||||| |||| || |||| |||||    
T  17225737 ctctggtgccaatttcggcgggc-aagtccatacagagctttgctctcgtttagaacggggcccc-gcaaatgggcggtgggattgatctcctcagatta 17225834  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||| | ||| ||||||||| ||||||||    
T  17225835 gtcggtccttagatcggatatcgagtttt 17225863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 28968160 - 28968078
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccct 220  Q
    ||||||||||||| |||||| ||||||||||| ||||| |||||||||| ||||  | |||| |||||||| |||||||||||    
T  28968160 caatttcggtgggttaagtccatacagaacttactctgcctttaaacggtgcccatgtaaataggcggtgggattggtcccct 28968078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 7491698 - 7491666
Alignment:
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  7491698 attagtcgattcttggatcggataccgagtttt 7491666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 27866268 - 27866217
Alignment:
Q  191 cccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatc 242  Q
    ||||||| |||||||||| ||| ||||||||| ||||||||||| |||||||    
T  27866268 cccgcaagtgggcggtgggattagtcccctcgaattagtcgatttttggatc 27866217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 28741928 - 28741849
Alignment:
Q  169 tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggatac 248  Q
    ||||||||||| ||||||  ||||| |||||||  ||||  |||||||| |||| |||||||| | ||||||||||||||    
T  28741928 tgctctggcttaaaacggaacccccacaaatggatggtgtgattggtcctctcgaattagtcggtccttggatcggatac 28741849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 4797260 - 4797294
Alignment:
Q  222 ggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||| ||||||||    
T  4797260 ggattagtcgattcttggatcggataacgagtttt 4797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 32596211 - 32596271
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||| |||||||||| ||||||||||||||||||||| ||| ||| | |||||| |||||||    
T  32596211 gcaagtgggcggtgggattggtcccctcggattagtc-atttttgaaacggatatcgagttt 32596271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 13753299 - 13753335
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaa 155  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  13753299 ggttcaattctctctggtgccaatttcggtgggctaa 13753335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 8484799 - 8484661
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  8484799 ggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 8484700  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8484699 cctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 27498863 - 27498731
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27498863 attccctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 27498764  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  27498763 attagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 19456340 - 19456211
Alignment:
Q  127 tccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  19456340 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattggtcccctcggat 19456242  T
Q  226 tagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||    
T  19456241 tagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 11926634 - 11926501
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||    
T  11926634 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcg 11926535  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||||    
T  11926534 gattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 15641237 - 15641106
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15641237 attccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 15641138  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  15641137 attagtcgattctt-gatcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 18207272 - 18207404
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  18207272 attccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctcgg 18207371  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  18207372 attagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 32059572 - 32059440
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  32059572 attccttctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 32059473  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||||||||||||||||||||||    
T  32059472 attagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 38684273 - 38684404
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||    
T  38684273 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccgcaagtgagcggtgggattggtcccctcgg 38684371  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  38684372 attagtcgattcttggatcggataccgattttt 38684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7085758 - 7085626
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||||    
T  7085758 attccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctcgg 7085659  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  7085658 attagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 30485893 - 30486025
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||    
T  30485893 attcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgatgcccccgcaagtgggcggtgggattggtcccctcgg 30485992  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||||||||||||||||||||    
T  30485993 attagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 35425082 - 35425210
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||| |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  35425082 cctctagtgccaatttcggtgggctaagtccatacagagctcgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggatta 35425181  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||| ||||    
T  35425182 gtcgattcttggatcggataccgaatttt 35425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 33709633 - 33709503
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| |||||||    |||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||    
T  33709633 attccctctggtgccaatttcggtgggctaagtccatacagaga--gctctggctttaaacgggacccccacaagtgggcggtgggattggtcccctcgg 33709536  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||| |||||    
T  33709535 attagtcgattcttggatcggataccgtgtttt 33709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 4603842 - 4603974
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||    
T  4603842 attccttctggtgccaatttcgatgggctaagtccatacagagctcgctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcgg 4603941  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||||||||||||||||||||||    
T  4603942 attagtcggtccttggatcggataccgagtttt 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 34310207 - 34310339
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||  || ||| |||||| |||||||||||||     
T  34310207 attccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgggacccccataagtggacggtgggattggtcccctcga 34310306  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||||||||||||||||||||||    
T  34310307 attaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 256
Target Start/End: Complemental strand, 23270643 - 23270522
Alignment:
Q  136 tgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgatt 234  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||||    
T  23270643 tgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgatt 23270544  T
Q  235 cttggatcggataccgagtttt 256  Q
    ||||||| ||||||| ||||||    
T  23270543 cttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 10869697 - 10869565
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||| ||||||||||||||||||||| | || || ||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||    
T  10869697 attccatctggttccaatttcggtgggctaagtccacactgagcttgctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcgg 10869598  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||||||||||||||| ||||||    
T  10869597 attagtcggttcttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 11465035 - 11464913
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||| |||| |||| ||||| ||||||||||||| ||||    
T  11465035 cctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggggcccc-gcaagtgggtggtgggattggtcccctcgaatta 11464937  T
Q  228 gtcgattcttggatcggataccga 251  Q
    ||||||||||||||||||||||||    
T  11464936 gtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 6014406 - 6014280
Alignment:
Q  131 tctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagt 229  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| || ||||| |||||||||  ||| ||||||||| ||||||    
T  6014406 tctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagt 6014307  T
Q  230 cgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||||||    
T  6014306 cgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 5049201 - 5049333
Alignment:
Q  124 aattccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||||||||| ||||||||| ||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||| |||    
T  5049201 aattccctctggtaccaatttcgatggtctaagttcatacagagcttgctctggctttaaacggg-cccccgcaaatggacggtgggattggtcccatcg 5049299  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||||||||||||||| ||||| ||||||    
T  5049300 aattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 22392796 - 22392885
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  22392796 cttgctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagtttt 22392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 27487679 - 27487554
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcggattagtc 230  Q
    |||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||| |||  |||| |||||||||| |||||||||||||||||||||    
T  27487679 tggtgccaatttcggtggactaagtccatacagagcttgctctagctttaaacgggggcccttgcaagtgggcggtgggattggtcccctcggattagtc 27487580  T
Q  231 gattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| |||||||    
T  27487579 gattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 37495112 - 37495251
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-------gcaaatgggcggtggaattggtc 216  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||   |||||       |||| |||||||||| |||||||    
T  37495112 attccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgcccccccccccgcccgcaagtgggcggtgggattggtc 37495211  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37495212 ccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 31288078 - 31287946
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| ||||||||||||||||||| |||||| ||||| | |||||| || ||||||||||||||||||||| |||||||||| ||||||| |||||     
T  31288078 attccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttgactttaaacggggcccccgcaagtgggcggtgggattggtctcctcga 31287979  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||| |||||||||||||||    
T  31287978 attagtcggttcttggaccggataccgagtttt 31287946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 19145543 - 19145412
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||| ||  ||||||||| |||||||||| |||||||||||||    
T  19145543 attccctctggtgccaatttcggtgggc-aagtccatacagagctttgctctggctttaaatggt-cccccgcaagtgggcggtgggattggtcccctcg 19145446  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| | ||||||||||||||||||||||||    
T  19145445 gattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 9659429 - 9659311
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||| |||||| ||||||||| |||||||||| |||||||    
T  9659429 caatttcggtgggctaagtccatacacagcttgctctggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattctt 9659330  T
Q  238 ggatcggataccgagtttt 256  Q
    |||| ||||||||||||||    
T  9659329 ggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  178 tttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 41351197 - 41351104
Alignment:
Q  162 cagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41351197 cagagcttgctctggctttaaacggggctcc-gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 12398580 - 12398448
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| ||||| |||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||  |||| ||| |||      
T  12398580 attccctatggtgtcaatttcggtggcctaagttcatacagagcttgctctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaa 12398481  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||||||| ||||||||||||||    
T  12398480 attagtcggttcttggattggataccgagtttt 12398448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 248
Target Start/End: Complemental strand, 13038586 - 13038463
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||| | |||||||||| |||||||| |  | | |||||||||||||||||||||||| |||||||||| |||| ||||||||     
T  13038586 attccctctggtgccaattttgatgggctaagttcatacagagcaag-tatggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcga 13038488  T
Q  224 attagtcgattcttggatcggatac 248  Q
    |||||||||||||||||||||||||    
T  13038487 attagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 248
Target Start/End: Complemental strand, 13108581 - 13108458
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||| | |||||||||| |||||||| |  | |||| ||||||||||||||||||||| |||||||||| |||| ||||||||     
T  13108581 attccctctggtgccaattttgatgggctaagttcatacagagcaag-tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctcga 13108483  T
Q  224 attagtcgattcttggatcggatac 248  Q
    |||||||||||||||||||||||||    
T  13108482 attagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 21236494 - 21236362
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||| ||| |||||||  ||||||||||| |||||||  || ||||| ||||||||||||||||||||| |||||||||| ||| |||||||| |    
T  21236494 attctctctagtgtcaatttcaatgggctaagtccatacagagttttctctgactttaaacggggcccccgcaagtgggcggtgggattagtcccctcag 21236395  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  21236394 attagtcgattcttgaatcggataccgagtttt 21236362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 26009396 - 26009264
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| ||||||||||||| |||||||||||| || |||| ||| ||||||||||||||||||||||||||| ||||  |||| ||| ||||||||||    
T  26009396 attccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaaacggggcccccgcaagtgggtagtgggattagtcccctcgg 26009297  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||| |||| ||| ||||||||    
T  26009296 attagtcggttcttgaatcgaatatcgagtttt 26009264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 34049897 - 34050008
Alignment:
Q  146 ggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcgg 244  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||| ||||||   |||||    
T  34049897 ggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcgg 34049996  T
Q  245 ataccgagtttt 256  Q
    ||||||||||||    
T  34049997 ataccgagtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 13659343 - 13659245
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||||||| || ||||||||||| ||||||||| |||||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  13659343 catagagaacttgctttgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaatttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 10399832 - 10399971
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtc- 216  Q
    ||||| |||| |||||| |||||||||| ||||||||||| |||| || | ||||||| |||||||||||||||||| || ||| |||||| |||||||     
T  10399832 ggtttgattctctctggcgccaatttcgatgggctaagtccatacggagcatgctctgactttaaacggggcccccgtaagtggacggtgggattggtca 10399931  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||||||||||||  ||| ||||||||    
T  10399932 ccctcgaattagtcgattcttggatcaaatagcgagtttt 10399971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 25750741 - 25750613
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| ||||||||||||||||||||| |||||| ||| ||| |||||||||||||  |||||| |||||  || |||| ||||  ||||||||| || |    
T  25750741 attccttctggtgccaatttcggtgggttaagtccatatagagcttgctctggctt--aacgggaccccc--aagtggggggtgagattggtcccttcag 25750646  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  25750645 attagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 38631048 - 38630979
Alignment:
Q  187 ggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38631048 ggcccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagtttt 38630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 42193554 - 42193671
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||| |||||||||| ||   |||||||| ||||||||||  ||||||| |||||||||    
T  42193554 cctctgatgccaatttcggtgggctaagtctatacagagtttgctttggctttaaatgga--ccccgcaagtgggcggtggggttggtcctctcggatta 42193651  T
Q  228 gtcgattcttggatcggata 247  Q
    ||||||||||||||| ||||    
T  42193652 gtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 12317276 - 12317155
Alignment:
Q  131 tctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtc 230  Q
    ||||||| ||||||||||||| ||||||   |||| ||||||||| |||||| |||| ||||||||| |||| ||||| |||| |||| |||||||||||    
T  12317276 tctggtgtcaatttcggtgggttaagtc---cagagcttgctctgactttaagcgggccccccgcaagtgggtggtgggattgatccc-tcggattagtc 12317181  T
Q  231 gattcttggatcggataccgagtttt 256  Q
     |||||| ||||||||||||||||||    
T  12317180 aattcttagatcggataccgagtttt 12317155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 248
Target Start/End: Original strand, 36954883 - 36955007
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||| | |||||||| | |||||||| |||||||  ||||| |||||||||| ||| ||||||||| ||| | |||| ||| ||||||||      
T  36954883 attccctctggttctaatttcggcgtgctaagtccatacagagtttgctttggctttaaatgggccccccgcaagtggactgtgggattagtcccctcat 36954982  T
Q  224 attagtcgattcttggatcggatac 248  Q
    |||||||||||||||||||||||||    
T  36954983 attagtcgattcttggatcggatac 36955007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 15971250 - 15971151
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||| || |||||||||||||||||||| ||||| | ||||||||| ||||||||||| ||||||||| |||||||||  |||| |||||||||||||    
T  15971250 cctctgatgtcaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggacccccgcaagtgggcggtgagattgatcccctcggatta 15971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 10631340 - 10631289
Alignment:
Q  205 gtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10631289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 31206301 - 31206440
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaact-tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtc 216  Q
    ||||| |||||| ||||||||||||||  ||| ||||||| ||||||| || |||||| |||||||| ||| ||||| ||| ||| |||||| ||||| |    
T  31206301 ggttttattccccctggtgccaatttcattggcctaagtccatacagagctatgctcttgctttaaatgggacccccacaagtggacggtgggattggac 31206400  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||||||||| | |||||  |||||||||||||||    
T  31206401 tcctcggattagtcggtccttgggccggataccgagtttt 31206440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 25587001 - 25587066
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggccccc 193  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || |||||    
T  25587001 cctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacaggaccccc 25587066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 36895490 - 36895622
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||| ||||||||||||| | |||| |||||| | | ||||||||||||  ||||  ||| |||||| ||||||| || |||| || |||||    
T  36895490 attccctctggtaccaatttcggtggtc-aagtccatacaaagctttgctctggcttagaacgtagccgccgcaagtgggcggggggattgttctcctcg 36895588  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||| ||||||||||||||||||||||||    
T  36895589 aattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 15931124 - 15931207
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtgg 208  Q
    |||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||| |||| | ||||| ||||||||||    
T  15931124 attccctctggtgccaatttcggtgg-ctaagtccatacagagcctgctctggctttaaacagggctctcgcaagtgggcggtgg 15931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 5067392 - 5067447
Alignment:
Q  190 ccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcgga 245  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 28614583 - 28614486
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| | |||| |||| |||||||||||  ||| ||| |||| |||||| |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  28614583 catacaaagcttgttctgactttaaacgggatccc-gcagatggacggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 15485411 - 15485291
Alignment:
Q  138 ccaatttcggtgggctaagtc-atacagaact-tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattc 235  Q
    |||||||||||||| |||||| ||||| |||| || |||||||||||| |||| |||||||| |||  ||||| ||||| ||||||||||||||||  ||    
T  15485411 ccaatttcggtgggttaagtccatacaaaactatgttctggctttaaatggggtccccgcaagtggatggtgggattggacccctcggattagtcggctc 15485312  T
Q  236 ttggatcggataccgagtttt 256  Q
    || | | |||||| |||||||    
T  15485311 ttaggttggatacagagtttt 15485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 930608 - 930486
Alignment:
Q  133 tggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcga 232  Q
    |||||||||||||||||| | || ||||||| | ||||||| |||||  |||  | ||| ||||| ||| | |||  ||||||||||||||||||||||     
T  930608 tggtgccaatttcggtggacaaattcatacatagcttgctccggcttagaacaag-ccctcgcaagtggacagtgtgattggtcccctcggattagtcgg 930510  T
Q  233 ttcttggatcggataccgagtttt 256  Q
    | ||||||||||||| ||||||||    
T  930509 tccttggatcggatatcgagtttt 930486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 7151453 - 7151500
Alignment:
Q  209 aattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||    
T  7151453 aattggtcccctagaattagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 24158251 - 24158166
Alignment:
Q  171 ctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||  ||||||||| | |||| |||||||||  |||||||||||| ||||||||| | |||| |||||||||||| ||||    
T  24158251 ctctggcttagaacggggcctctgcaagtgggcggtgagattggtcccctcagattagtcggtccttgaatcggataccgaatttt 24158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 8821093 - 8821181
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||  |||| ||  ||| |||| ||||| ||||||| | ||| ||||||| ||||||||||| |||||||||||||    
T  8821093 ttgctctggctttaaattgggctccaacaagtgggtggtgggattggtcacttcgaattagtctattcttggatcagataccgagtttt 8821181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 41568996 - 41568869
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||| ||| |||||||||||| ||||||| |||||||| ||| | || ||||||| ||  |||| ||||||||| ||||| |||||||||||  |||||    
T  41568996 cctcttgtgtcaatttcggtggactaagtccatacagaatttgttttgtctttaaatggaacccc-gcaaatgggtggtgggattggtcccctaagatta 41568898  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    || |||| || |||| |||| ||||||||    
T  41568897 gttgattattcgatcagatatcgagtttt 41568869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 42006843 - 42006930
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| |||| |   |||| ||||||||||||||| ||| || |||||||| ||||||| ||||||||||||| ||||    
T  42006843 ttgctctggctttaaatggggtctt-gcaagtgggcggtggaattgttccacttggattagttgattctttgatcggataccgaatttt 42006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 25548617 - 25548534
Alignment:
Q  173 ctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| | ||  ||||||| |  ||||||| |||||||  |||| |||||||||||||||||||| ||||||||||||    
T  25548617 ctggctttaaaagaggttcccgcaagtacgcggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagtttt 25548534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 3600044 - 3600002
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgag 252  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  3600044 attgatcccctcggattagtcgattcttggatctgataccgag 3600002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 33737882 - 33737938
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||  |||||||||||||| ||||| |||||||| |||||||||||||||||    
T  33737882 tgggcggtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagtttt 33737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 41084123 - 41084180
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | |||| |||| |||||||||||| |||||| |||||||||||||||||    
T  41084123 tgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 15971143 - 15971096
Alignment:
Q  202 gcggtggaattggtcccctcggattagtcgattcttggatcggatacc 249  Q
    |||||||||||| |||||||| ||||||||||||||| |||| |||||    
T  15971143 gcggtggaattgatcccctcgaattagtcgattcttgaatcgaatacc 15971096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 256
Target Start/End: Complemental strand, 10813980 - 10813851
Alignment:
Q  128 ccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    |||||||||| ||||||   ||||||||||| |||| || ||| ||||||||||||||| |||||||  ||| | || ||||| ||| ||||||| ||||    
T  10813980 ccctctggtgtcaatttttttgggctaagtccatacggagctttgctctggctttaaacagggcccca-caagtaggtggtgggatttgtccccttggat 10813882  T
Q  226 tagtcgattcttggatcggataccgagtttt 256  Q
    |||||  |||||| | || ||||||||||||    
T  10813881 tagtcagttcttgaaccgaataccgagtttt 10813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 16247124 - 16247026
Alignment:
Q  134 ggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    ||||||||| | |||||||||   |||||||||||| ||| ||| |||||| |||  |||| ||| ||| |||||| ||||| ||||||||||||||||    
T  16247124 ggtgccaatcttggtgggctagtccatacagaactttgctttgggtttaaatgggctccccacaagtggacggtgggattggacccctcggattagtcg 16247026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 21377346 - 21377249
Alignment:
Q  159 atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||  |||||| |||||  ||||||||| | |||| |||| ||||  ||||||| | | |||||||||| |  |||||||||||||||||||||    
T  21377346 atacagagtttgctcaggcttagaacggggcctctgcaagtgggtggtgagattggtctctttggattagtcggtctttggatcggataccgagtttt 21377249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 38631093 - 38631052
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacaga 165  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  38631093 attccctctggtgccaatttcgatgggctaagtccatacaga 38631052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 9100302 - 9100338
Alignment:
Q  220 tcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| |||| |||||||||||||||||||||    
T  9100302 tcggattagttgattattggatcggataccgagtttt 9100338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 10837437 - 10837493
Alignment:
Q  200 gggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||  |||||||||||| ||||||| | | ||| ||||||||||||||||||    
T  10837437 gggcggtgagattggtcccctcagattagttggtccttagatcggataccgagtttt 10837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 22253272 - 22253144
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagt-catacagaact-tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||| |||||||||||| |||||||||| |||||| | || || ||||| |||||| | ||||||| ||| ||| | | || ||| ||||||||  ||||    
T  22253272 ctctagtgccaatttcgatgggctaagtccatacaaagctatgttctggatttaaatgaggcccccacaactggacagcgggattcgtcccctcaaatta 22253173  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    ||||  |||||||||| ||| ||||||||    
T  22253172 gtcggatcttggatcgaataacgagtttt 22253144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 3734755 - 3734623
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  3734755 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcgg 3734656  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  3734655 attagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 4718714 - 4718846
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  4718714 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 4718813  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  4718814 attagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 34237787 - 34237655
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  34237787 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcgg 34237688  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  34237687 attagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 8765658 - 8765526
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  8765658 attccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcgg 8765559  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  8765558 attagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 21603299 - 21603431
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21603299 attccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 21603398  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  21603399 attagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 39349325 - 39349457
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  39349325 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgg 39349424  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||| ||||||    
T  39349425 attagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 15259538 - 15259407
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||     
T  15259538 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcga 15259439  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||||||||| ||||||||    
T  15259438 attagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 2618255 - 2618387
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  2618255 attccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcgg 2618354  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||| |||||||||    
T  2618355 attagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 28193543 - 28193674
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||    
T  28193543 attccctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctacaagtgggcggtgggattggtcccctcgg 28193642  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  28193643 attagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 32879348 - 32879480
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||||||| ||| |||||||||| ||||||||||||||    
T  32879348 attccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggattggtcccctcgg 32879447  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||||||||||||    
T  32879448 attagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 42328067 - 42328205
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| ||| || ||| ||||||||    
T  42328067 ggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacgatgggattggtcc 42328166  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  42328167 cctcgaattagtcgattcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 6953139 - 6953008
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| | |||||||| |||||| |||||||    
T  6953139 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttggcggtgggattggt-ccctcgg 6953041  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||| ||||||||||||    
T  6953040 attagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 20305977 - 20306109
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||     
T  20305977 attccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcga 20306076  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| ||||||||||||||||||||||    
T  20306077 attagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 21092610 - 21092742
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||     
T  21092610 attccttctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcga 21092709  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| ||||||||||||||||||||||    
T  21092710 attagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 4698855 - 4698723
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||| |||||||||| || ||||||| ||||||||||||||    
T  4698855 attccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcgg 4698756  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| ||||| ||||||||||||||    
T  4698755 attagtcgattcatggattggataccgagtttt 4698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 34610819 - 34610687
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||| | ||| ||||| |||||||| |||||||||||||||     
T  34610819 attccctctgatgccaatttcggtggtctaagtctatacagagcttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcga 34610720  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  34610719 attagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 42643250 - 42643118
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||| |||||||| |||||||| |||||||||| |||||||||||||     
T  42643250 attccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgggggccccgcaagtgggcggtgggattggtcccctcgc 42643151  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||||||||||||||||||||||||||    
T  42643150 attagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 19471672 - 19471811
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtc 216  Q
    ||||| |||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||| ||| |||||||    
T  19471672 ggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 19471771  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  19471772 ccctcgaattagtcgatacttggatcggataccgagtttt 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 19542596 - 19542735
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtc 216  Q
    ||||| |||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||| ||| |||||||    
T  19542596 ggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 19542695  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  19542696 ccctcgaattagtcgatacttggatcggataccgagtttt 19542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 19590100 - 19589961
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtc 216  Q
    ||||| |||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||| ||| |||||||    
T  19590100 ggtttgattccctctggtgccaattttggtgagctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcgatgggattggtc 19590001  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  19590000 ccctcgaattagtcgatacttggatcggataccgagtttt 19589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 14633023 - 14633155
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||  || ||| |||||||||| ||||||||||| ||    
T  14633023 attccctctggtgccaatttcggtgggctaagtctatacagagcttgctctggctttgaacggagcgtccacaagtgggcggtgggattggtccccttgg 14633122  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||| ||||||    
T  14633123 attagtcgattcttggatcggataccaagtttt 14633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 25248418 - 25248547
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    ||||||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||    
T  25248418 attccctctggtgtcaatttcggtaggctaagtcatacagagtttgctctggctttaaac-gggccctcgcaagtgggcggtgggattggtcccctcgga 25248516  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| || ||||||||||||||||||    
T  25248517 ttagtcgatt-tttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 264531 - 264400
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||     
T  264531 attccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacggg-cccccacaaatgggcggtgagattgatcccctcga 264433  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  264432 attagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 651390 - 651521
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||     
T  651390 attccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacggg-cccccacaaatgggcggtgagattgatcccctcga 651488  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  651489 attagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 837125 - 837256
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||  |||| ||||||||     
T  837125 attccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacggg-cccccacaaatgggcggtgagattgatcccctcga 837223  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  837224 attagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 2639499 - 2639411
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2639499 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 18128582 - 18128714
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||| ||  |||| ||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||| ||| |    
T  18128582 attctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcag 18128681  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||||||||| ||||||||||||    
T  18128682 attagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 10292124 - 10292255
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    |||||||||| |||||||||| ||||||| ||||   ||||  |||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||    
T  10292124 attccctctgatgccaatttcagtgggctgagtccatcagagattgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcgga 10292223  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||||||||||||| ||||||||||||    
T  10292224 ttagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 20469986 - 20470117
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| | |||||||| | ||||||||||| ||||||| |||||||||||||||||| | |||||||||| |||||||||| ||||||  ||||||    
T  20469986 attccctctagagccaatttagatgggctaagtccatacagagcttgctctggctttaaacagagcccccgcaagtgggcggtgggattggt-tcctcgg 20470084  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||||||||||||||||||||    
T  20470085 attagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 27746467 - 27746335
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatggg-cggtggaattggtcccctcg 222  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||  ||| |||| || ||||||| |||||||||    
T  27746467 attccctttggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaaggggcccca-caagtggggcgatggaattagtcccctcg 27746369  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||| ||| ||| ||||    
T  27746368 gattagtcgattcttggatcgaatatcgattttt 27746335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 28964102 - 28964233
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| |||||||||||||||||||||||||||| |||| || ||   |||||||||||||||||||||||||| |||||| ||| |||||||||||||     
T  28964102 attccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccgcaagtgggcg-tgggattggtcccctcga 28964200  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||| |||| |||||||    
T  28964201 attagtcgattcttagatcgaatactgagtttt 28964233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 28088355 - 28088478
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| ||||| ||||||||||||| |||||| ||||||| ||||||||| ||||||| |||||| |||||| |||||||||| |||| ||||||| |    
T  28088355 attccctttggtgtcaatttcggtgggttaagtccatacagagcttgctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcag 28088454  T
Q  224 attagtcgattcttggatcggata 247  Q
    | ||||||||||||||||||||||    
T  28088455 aatagtcgattcttggatcggata 28088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 1219418 - 1219550
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| |  ||||||| |||||||||||| |||||||| ||| ||||||||||||||||||||||  || |||||||| | || |||||| ||||    
T  1219418 attccctctgatatcaatttcagtgggctaagtccatacagaatttgttctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcgg 1219517  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||| ||||||| ||||    
T  1219518 attagtcgattcttagatcgaataccgaatttt 1219550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 18532176 - 18532299
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||| | || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| |||||||||  |||         ||    
T  18532176 attccctcagatgtcaatttcggtgggctaagtccatacagaacttgctctggatttaaacggggcccctgcaagtgggcggtgagatt---------gg 18532266  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  18532267 attagtcgattcttggatcggataccgagtttt 18532299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 21667627 - 21667731
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||| ||  |||||| ||||||||||||||||| ||||| |||||||||    
T  21667627 tggtgctaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggagcatccgcaagtgggcggtggaattggt-ccctcagattagtcg 21667725  T
Q  232 attctt 237  Q
    ||||||    
T  21667726 attctt 21667731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 24018465 - 24018584
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggc-ccccgcaaatgggcggtggaattggtcccctcggattagtcgattct 236  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||| | |||| ||| |||||||||  ||||||||||| | |||||||| ||||    
T  24018465 caatttcagtgggctaagtccatacagagcttgctctggctttaaacgggcctccccacaagtgggcggtgagattggtccccttgaattagtcggttct 24018564  T
Q  237 tggatcggataccgagtttt 256  Q
    |||| |||||| ||||||||    
T  24018565 tggaccggatatcgagtttt 24018584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 24999303 - 24999394
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggt 215  Q
    |||||||||| ||||||||| | |||||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24999303 attccctctgatgccaattttgatgggctaagttcatatagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 24999394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 256
Target Start/End: Original strand, 2166776 - 2166897
Alignment:
Q  135 gtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgat 233  Q
    ||||||||||| || ||||||||| ||||||| |||||||||||||||||    | |||||||| |||||||||| |||||||||||| |||||||||||    
T  2166776 gtgccaatttcagtaggctaagtccatacagagcttgctctggctttaaa-taagaccccgcaagtgggcggtgggattggtcccctcagattagtcgat 2166874  T
Q  234 tcttggatcggataccgagtttt 256  Q
    | || ||| ||||||||||||||    
T  2166875 tttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 33746951 - 33747083
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||  ||||||||||||| || ||||| | | ||| | ||||| ||  ||||| |||||||||| ||| ||||||||||||| | |||||    
T  33746951 attccctctagtgttaatttcggtgggcaaattcatataaagctttgttctggtttagaacggagcccccgcaagtggacggtggaattggttctctcgg 33747050  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| ||||||||||||||||||||||    
T  33747051 attagtcgatccttggatcggataccgagtttt 33747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 255
Target Start/End: Complemental strand, 7558071 - 7557952
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattag 228  Q
    |||||||||||||||| |||||||||||||        |||| |||||||||||||||  ||||||||| ||| |||||| ||||||||||||| |||||    
T  7558071 cctctggtgccaattttggtgggctaagtccg------cttgttctggctttaaacgga-cccccgcaagtggacggtgggattggtcccctcgaattag 7557979  T
Q  229 tcgattcttggatcggataccgagttt 255  Q
    |||||| ||| ||||||||||||||||    
T  7557978 tcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 26168986 - 26168856
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    ||||| |||||  ||| ||||||||||||||||| |  ||||||||| |||| |||||||||||| | | ||| ||||| |||| | ||  |||||||||    
T  26168986 ggtttgattcctcctgatgccaatttcggtgggcaagttcatacagagcttgttctggctttaaatgagcccctcgcaagtgggggatgagattggtccc 26168887  T
Q  219 ctcggattagtcgattcttggatcggatacc 249  Q
    |||||| |||||||||||||||||| |||||    
T  26168886 ctcggagtagtcgattcttggatcgaatacc 26168856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 3403634 - 3403502
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||| |||||||||||||||||||||| ||||| ||||| ||||| | | |||||||||| ||||||| || || |||||||||   ||||||||||||    
T  3403634 attccatctggtgccaatttcggtgggc-aagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcggtgaggttggtcccctcg 3403536  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     ||||||| |||||| || | |||||||||||||    
T  3403535 aattagtcaattcttagaccagataccgagtttt 3403502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 9047415 - 9047279
Alignment:
Q  120 gtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    |||| |||||||||  ||||||||| ||||| ||||||| ||||| | ||| ||||| ||||||||||  ||||||||  ||| | ||||||||||||||    
T  9047415 gtttgattccctctaatgccaattttggtggactaagtccatacaaagcttactctgactttaaacggaacccccgcatgtggacagtggaattggtccc 9047316  T
Q  219 ctcggattagtcgattcttggatcggataccgagtttt 256  Q
     | | |||||||| ||||||||||||||||||| ||||    
T  9047315 tt-gaattagtcggttcttggatcggataccgaatttt 9047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 13749133 - 13749250
Alignment:
Q  134 ggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    ||||||||||| ||||||| |  ||||||| | ||| ||||||||||  |||||||||||| |||| ||||| ||||||||||||||||||||||||||     
T  13749133 ggtgccaattttggtgggcaagttcatacaaagctttgctctggcttagaacggggccccccgcaagtgggcagtggaattggtcccctcggattagtca 13749232  T
Q  232 attcttggatcggatacc 249  Q
     | |||||||| ||||||    
T  13749233 gtccttggatcagatacc 13749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 249
Target Start/End: Complemental strand, 36848877 - 36848757
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||||||||||||||||||||||||| ||||| ||  |||||| ||||||||| | || | || ||| |||||||||| ||| ||||||||  ||||    
T  36848877 cctctggtgccaatttcggtgggctaagtccatacggagtttgctcgggctttaaatgagg-caccacaagtgggcggtgggattagtcccctcaaatta 36848779  T
Q  228 gtcgattcttggatcggatacc 249  Q
    |||| || ||||||||||||||    
T  36848778 gtcggtttttggatcggatacc 36848757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 43817835 - 43817754
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccga 251  Q
    ||||| ||||||||| || ||||||||| |||||||||||||||||| ||||  |||| |||||||||||||||||| ||||    
T  43817835 gctctagctttaaacaggacccccgcaagtgggcggtggaattggtctcctcaaattaatcgattcttggatcggatgccga 43817754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 28908886 - 28909025
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtc 216  Q
    |||| |||||||||||||| ||||| | |||||| ||||| ||||||| ||| | |||||||||||||||||| ||||||| |||||| ||  |||| ||    
T  28908886 ggttcaattccctctggtgtcaattacagtgggc-aagtccatacagagctttgttctggctttaaacggggctcccgcaagtgggcgatgtgattgatc 28908984  T
Q  217 ccctcggattagtcgattcttggatc-ggataccgagtttt 256  Q
    ||||| ||||||||| | |||||||| ||| ||||||||||    
T  28908985 ccctcagattagtcggtccttggatcgggacaccgagtttt 28909025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 34694708 - 34694575
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacgggg-cccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||| |||||||||||||||||||||| || ||||||| | ||| |||| |||||  |||||   ||||| | | ||| |||||| ||||||||||||     
T  34694708 attccatctggtgccaatttcggtgggcaaattcatacaaagctttgctccggcttagaacggaatccccctctagtggacggtgggattggtcccctca 34694609  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||  | ||||||||||||| ||||||||    
T  34694608 gattagtctgtccttggatcggataacgagtttt 34694575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 5740429 - 5740383
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  5740429 attggtcccctcggattagtcggtccttggatcggacaccgagtttt 5740383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 16990722 - 16990784
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||||||| | ||||||||| |||||||||| | ||||||||||||||| ||||||    
T  16990722 gcaagtgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagtttt 16990784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 256
Target Start/End: Complemental strand, 10544956 - 10544925
Alignment:
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||    
T  10544956 ttagtcgattcttggatcggataccgagtttt 10544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 33534618 - 33534567
Alignment:
Q  205 gtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||| |||||||||||| | |||||||||| |||||||||||    
T  33534618 gtgggattggtcccttcggattagtcggtccttggatcggttaccgagtttt 33534567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 34639337 - 34639208
Alignment:
Q  127 tccctctggtgccaatttcggtgggctaagt-catacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    ||||||||||||||||||||||||| ||||| |||||||| | ||||||||||||  ||| ||||| | |||| ||| |||| | ||||||||| ||| |    
T  34639337 tccctctggtgccaatttcggtggg-taagtccatacagagctttgctctggcttagaac-gggcctctgcaagtggacggtaggattggtcccttcgaa 34639240  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    ||| ||| | |||| || ||||||| ||||||    
T  34639239 ttaatcggtccttgaattggataccaagtttt 34639208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 36094816 - 36094877
Alignment:
Q  187 ggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggatac 248  Q
    ||||||||||| |||| || ||  ||||||||||||||||||||| |  |||||||||||||    
T  36094816 ggcccccgcaagtgggaggcggtgttggtcccctcggattagtcggtctttggatcggatac 36094877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 20505689 - 20505753
Alignment:
Q  192 ccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||| ||||||||||||  ||||| || ||||| |||| ||| |||||||||    
T  20505689 ccgcaagtgggcggtgggattggtcccctcaaattagccggttcttagatcagatgccgagtttt 20505753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 34844890 - 34844758
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  34844890 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 34844791  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  34844790 attagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 40058984 - 40058852
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  40058984 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 40058885  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  40058884 attagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 52983684 - 52983815
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  52983684 attccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 52983783  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  52983784 attagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 27528927 - 27528795
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||    
T  27528927 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttatacggggcccccgcaagtgggcggtgagattggtcccctcgg 27528828  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  27528827 attagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 32986256 - 32986394
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||| |||||||||| ||||||||    
T  32986256 ggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggattggtcc 32986355  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  32986356 cctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 34723864 - 34723996
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||    
T  34723864 attccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctctcgg 34723963  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  34723964 attagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 54127480 - 54127342
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  54127480 ggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 54127381  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| |||||||| ||||||| |||||||    
T  54127380 cctcggattagtcggttcttggaccggatactgagtttt 54127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 5609334 - 5609202
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||| |||||| |||| |||||||||    
T  5609334 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattgatcccctcgg 5609235  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  5609234 attagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 20078122 - 20077986
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||| ||| || |    
T  20078122 ggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgtaagtgggcggtgggattagttc 20078023  T
Q  218 cctcggattagtcgattcttggatcggataccgagtt 254  Q
    |||||||||||||||||||||||||||||||||||||    
T  20078022 cctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 33696417 - 33696279
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||  ||||||||    
T  33696417 ggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtgagattggtcc 33696318  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||||||| |||||||||||||||| ||||||||    
T  33696317 tctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 20566415 - 20566547
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||| ||| |||||||||||| |    
T  20566415 attccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcag 20566514  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||| ||||||||    
T  20566515 attagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 32990500 - 32990632
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  32990500 attccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 32990599  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    | |||||||||||||||||| |||| |||||||    
T  32990600 actagtcgattcttggatcgaatactgagtttt 32990632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 45787836 - 45787704
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||     
T  45787836 attccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtggacggtgggattggtcccctcga 45787737  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  45787736 attagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 46714459 - 46714590
Alignment:
Q  126 ttccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  46714459 ttccctttggtgccaatttcggtgggctaagtccatacagagcttgcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgga 46714558  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||||||| |||||||||||||||||    
T  46714559 ttagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 19660670 - 19660532
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||| ||||| ||| |||||||||||| |||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| |||| |||    
T  19660670 ggtttgattctctctgatgcaaatttcggtgggataagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattgatcc 19660571  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19660570 cctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 44343579 - 44343711
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||||     
T  44343579 attccctctggtgctaattttggtgggctaagtccatacagagcttgctctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctcga 44343678  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  44343679 attagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 25852279 - 25852412
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaa-cggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| ||| ||||| |||||  ||| |||||||||||||    
T  25852279 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaacgggaccctcgcaagtgggcaatgggattggtcccctcg 25852378  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||||||| |||||||||||||||    
T  25852379 gattagtcggttcttggaccggataccgagtttt 25852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 125 - 247
Target Start/End: Complemental strand, 9517773 - 9517650
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||||  |||| ||||  ||||||||||||||    
T  9517773 attctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagattggtcccctcgg 9517674  T
Q  224 attagtcgattcttggatcggata 247  Q
    ||||||||||||||||||||||||    
T  9517673 attagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 36131642 - 36131510
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||| ||||||| ||||||| |||||| || ||||||||||| |||||| || |||||||||| ||||||||||||||    
T  36131642 attccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgggcggtgggattggtcccctcgg 36131543  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| || |||| |||||||||||||    
T  36131542 attagtcgattattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 13550271 - 13550404
Alignment:
Q  123 taattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctc 221  Q
    ||||||||||| |||||||||||||||||||||||| |||| || ||| |||||||||||||||||| |||| ||| |||||||| | || |||||||||    
T  13550271 taattccctctagtgccaatttcggtgggctaagtccataccgagcttactctggctttaaacggggtccccacaagtgggcggtaggataggtcccctc 13550370  T
Q  222 ggattagtcgattcttggatcggataccgagttt 255  Q
    |||||| |||||||||||||||  ||||||||||    
T  13550371 ggattaatcgattcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 13584386 - 13584254
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||     
T  13584386 attccctctggtgtcaatttcgatgggctaagtccatagagagcttgctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcga 13584287  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||| |||| |||| |||||||    
T  13584286 attagtcggttcttgaatcgaatactgagtttt 13584254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 49287923 - 49288054
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||| | ||||||| |||||| ||  ||||||||||||||    
T  49287923 attctctctggtgccaatttcggtgggctaagtccatacaaaatttgctatggctttaaacggg-ctcccgcaagtgggcgctgagattggtcccctcgg 49288021  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||| ||||| |||||||    
T  49288022 attagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 12500196 - 12500059
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||||||||||||||||||  ||||||||||| ||||| | ||||||||||||||||||||| ||||||||| ||||||||  ||||| | |    
T  12500196 ggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-c 12500098  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||||||| ||||||||| |||||||||||||||    
T  12500097 tctcggattagtcaattcttggaccggataccgagtttt 12500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 21387617 - 21387487
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||||||||  |||||||| ||||||||||   ||||||||||||    
T  21387617 attccctatagtgtcaattttggtgggctaagtctatacagagcttgctctggctttaaacgggatccccgcaagtgggcggtggg--tggtcccctcgg 21387520  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||||||||||||| ||||||    
T  21387519 attagtcgattattggatcggataccaagtttt 21387487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 18875648 - 18875517
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| ||||  |||| |||| |||||||||    
T  18875648 attccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccacaagtgggtagtgggattgatcccctcgg 18875550  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| ||| ||||||| |||||||||||||    
T  18875549 attagtcaatttttggatcagataccgagtttt 18875517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 55961881 - 55961754
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||| ||| |||||||||| |||||| || ||||||||    
T  55961881 cctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacgggg-ccccacaagtgggcggtgggattggttccttcggatta 55961783  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
     |||||||||| |||| ||||||| ||||    
T  55961782 atcgattcttgaatcgaataccgaatttt 55961754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 256
Target Start/End: Original strand, 27574396 - 27574515
Alignment:
Q  138 ccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattct 236  Q
    ||||||||||| |||||| | |||||||| ||||||||||||||||| ||||||||||||| |||||||||   ||||||||||||||||| || |||||    
T  27574396 ccaatttcggtaggctaaattcatacagagcttgctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattct 27574495  T
Q  237 tggatcggataccgagtttt 256  Q
    |||||||||||| |||||||    
T  27574496 tggatcggatactgagtttt 27574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 22488146 - 22488028
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||| ||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||| | |||    
T  22488146 caatttcggtggactaagtccatatagagcttgttctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtcctt 22488047  T
Q  238 ggatcggataccgagtttt 256  Q
    |||||||||||| ||||||    
T  22488046 ggatcggataccaagtttt 22488028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 35229243 - 35229365
Alignment:
Q  136 tgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccg-caaatgggcggtggaattggtcccctcggattagtcgat 233  Q
    ||||||||||||||||||||||| ||||| | ||||||||| ||||||||||| |||||  ||| || ||||||| ||||||||||||| ||||||||||    
T  35229243 tgccaatttcggtgggctaagtccatacatagcttgctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgat 35229342  T
Q  234 tcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||    
T  35229343 tcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 35674873 - 35674749
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||| | ||       |||||    
T  35674873 attccctctggagccaatttcggtgggctaagtccatacagagcttgctctgcctttaaacggggcccccgcaagtgggcggttggat-------ctcgg 35674781  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  35674780 attagtcgattctt-gatcggataccgagtttt 35674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 51535678 - 51535818
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-----catacagaacttgc---tctggctttaaacggggccccc-gcaaatgggcggtggaattggt 215  Q
    |||||||||||||||||||| |||||||||| |     |||||||| |||||   |||||||||||||||||||||| |||| |||||||||| ||||||    
T  51535678 attccctctggtgccaattttggtgggctaattaagtccatacagagcttgcagctctggctttaaacggggcccccagcaagtgggcggtgggattggt 51535777  T
Q  216 cccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||||||||| ||||||||||||| ||||    
T  51535778 cccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 51595094 - 51595219
Alignment:
Q  132 ctggtgccaatttcggtgggctaagtca-tacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtc 230  Q
    ||||||||||||||| ||| |||| ||| || ||||||||||||| |||||||||||  |||||||| ||| ||||||||||| || | |||||||| ||    
T  51595094 ctggtgccaatttcgatggactaaatcaatagagaacttgctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatc 51595193  T
Q  231 gattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||    
T  51595194 gattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 25969632 - 25969504
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||| || || ||||||| |||||| ||||||     
T  25969632 attccccctggtgccaatttcggtggcc-aagtccatacagaacttgctctggctttaaac-gggcccccgtaagtgagcggtgggattggt-ccctcga 25969536  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||| ||||||||| ||||||    
T  25969535 attagtcgattcttgaatcggatactgagttt 25969504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 32942435 - 32942562
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||  ||||| ||| ||| |||||| ||||||||||||||    
T  32942435 attctctctgatgccaatttcggtgggctaagtccatacagagcttactctggctttaaacggcccccccacaagtggacggtgggattggtcccctcgg 32942534  T
Q  224 attagtcgattcttggatcggataccga 251  Q
    || | ||||||||||||| ||| |||||    
T  32942535 ataaatcgattcttggattggaaaccga 32942562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 53787177 - 53787057
Alignment:
Q  138 ccaatttcggtgggctaagtc-atacagaact-tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattc 235  Q
    ||||||||||||||||||||| || | || || |||||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||||| ||     
T  53787177 ccaatttcggtgggctaagtccatgcggagctatgctctggctttaaacggagcccccgcaaatgggcggtgggattagtcccctcagattagtcggttt 53787078  T
Q  236 ttggatcggataccgagtttt 256  Q
    |||||||| |||||| |||||    
T  53787077 ttggatcgaataccgggtttt 53787057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 13873427 - 13873317
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||| |||||||| ||||||||  ||||||| |||| |||| |||||||||||| |||| |||||||||| ||| || ||    
T  13873427 attccctctggtgccaatttcggtaggctaagttcatacagagtttgctctagcttcaaacagggcccccgcaagtgggtggtggaattgatcctctggg 13873328  T
Q  224 attagtcgatt 234  Q
    |||||||||||    
T  13873327 attagtcgatt 13873317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 33992691 - 33992773
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggt 206  Q
    |||| ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  33992691 attctctctggtgccaatttcggtgggctaagtccatacatagcttgctctggctttaaacggggcccccgcaagtgggcggt 33992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 1985901 - 1986031
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||| ||||||| ||||||||||| |||||||     |||||||||||||||| |||||| ||| ||||||||||||||||| |  ||||    
T  1985901 attccctttggtgcgaatttcgatgggctaagtccatacagagtaaactctggctttaaacggagcccccacaagtgggcggtggaattggt-ctatcgg 1985999  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||||||||||||    
T  1986000 attagtcgattcttggat-ggataccgagtttt 1986031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 4912034 - 4912123
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||| |||||||||| |||| ||||  |||| ||||| || ||||||||||||||||||| |||||||||||||    
T  4912034 cttgctctggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagtttt 4912123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 34835594 - 34835726
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||||||||| |||||||||||||||||||| |||| || ||   ||||||||||||  |||||||| |||| |||||| ||  |||||||||||||    
T  34835594 attccctctggtgtcaatttcggtgggctaagtccatacggagctatgtctggctttaaatagggccccccgcaagtgggcg-tgagattggtcccctcg 34835692  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| ||||| |||| |||||||    
T  34835693 gattagtcgattcttagatcgaatactgagtttt 34835726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7392095 - 7391965
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| ||||||||||||||||||  |||||| |||||||  |||||||||||||||| ||| |||||  |  |||||||||| |||| |||||||||    
T  7392095 attccctatggtgccaatttcggtggt-taagtccatacagagtttgctctggctttaaatgggacccccatag-tgggcggtgggattgttcccctcgg 7391998  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||| ||| ||||||||||||||    
T  7391997 attagtcggttcttcgattggataccgagtttt 7391965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 20527170 - 20527035
Alignment:
Q  120 gtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    |||| ||||||||||| |||||||||||||||||||||| ||| ||| |||| | | | ||||||| ||||||| | || |||||||| | ||||||| |    
T  20527170 gtttgattccctctggcgccaatttcggtgggctaagtccatatagagcttgatttcggtttaaacagggcccc-gtaagtgggcggtaggattggtctc 20527072  T
Q  219 ctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||||||||||||||| |||||||  |||||||||||    
T  20527071 ctcggattagtcgatttttggatcaaataccgagttt 20527035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 23639758 - 23639821
Alignment:
Q  193 cgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 23645416 - 23645479
Alignment:
Q  193 cgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 30879303 - 30879166
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||||||||||||||||||| |||| ||| || ||||| |  |||||||||||||||| |||| ||  |||| ||| |||||| |||||| |    
T  30879303 ggtttgattccctctggtgccaatttcgatgggttaaatccatacaaagtttgctctggctttaaagggggtcct-gcaagtggacggtgggattggttc 30879205  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||| |||||||||||||| |||||||| ||||    
T  30879204 cctcagattaatcgattcttggatcagataccgaatttt 30879166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 52494623 - 52494685
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 55158409 - 55158343
Alignment:
Q  190 ccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  55158409 ccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 4064981 - 4065057
Alignment:
Q  180 taaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  4064981 taaacggagcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 9978585 - 9978509
Alignment:
Q  180 taaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||| ||||||||| |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  9978585 taaatgggtcccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 12824465 - 12824597
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| ||| |||||| | |||||||||| |||| |||  ||||||| |||||||| || || || |||| ||| |||||| ||||||| | |||     
T  12824465 attccctcttgtgtcaattttgatgggctaagttcatatagagtttgctctagctttaaatggagctcctgcaagtggacggtgggattggtctcatcga 12824564  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||| |||||||    
T  12824565 attagtcgattcttggatcggatacggagtttt 12824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 13771615 - 13771482
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaact-tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||| || |||| ||||||||||||||| ||||  | || ||||||||||||||||||||| ||||||| |||  | ||  |||||||||||      
T  13771615 attccctctgatgtcaatctcggtgggctaagtccatacgaagctatgctctggctttaaacggggctcccgcaagtggatgatgagattggtcccctat 13771516  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||| ||||||||||||||||||| ||||    
T  13771515 aattagtcggttcttggatcggataccgaatttt 13771482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 43719155 - 43719087
Alignment:
Q  188 gcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| || |||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||    
T  43719155 gcccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaatttt 43719087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 4585800 - 4585713
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||||||| ||||||||| ||||||||||| |||||||  |||||||||||||||||| ||| ||| ||||| ||||    
T  4585800 cttgctttggctttaaacggg-cccccgcaagtgggcggtgga-ttggtcctttcggattagtcgattcttagattggacaccgattttt 4585713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 13716582 - 13716450
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||| || ||||||||||| |||||| |||| ||||| |||| ||||| || |||||||| |||||| ||||| |||||||||| |||||||| || |    
T  13716582 attccccctagtgccaatttcagtgggc-aagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattggtcctcttg 13716484  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||  |||||| ||||||||| |||||||    
T  13716483 gattggtcagttcttgaatcggatactgagtttt 13716450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 17637908 - 17637852
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  17637908 tgggcggtgatattggtcccctcggattagtcgattctt-gatcggataccgagtttt 17637852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 22625202 - 22625097
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctc---------tggctttaaacggggcccccgcaaatgggcggtggaattgg 214  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||||         || ||||||| ||||||||||||| |||||||||| |||||    
T  22625202 attccctctggagccaatttcggtgggctaagtccatacagagcttgctcagccagctctgcctttaaatggggcccccgcaagtgggcggtgggattgg 22625103  T
Q  215 tcccct 220  Q
    ||||||    
T  22625102 tcccct 22625097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 23131493 - 23131436
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23131493 tgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagtttt 23131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 9646304 - 9646217
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||  ||| ||||| |||||| ||||| |||| |||| ||||||||||||||||| |  ||||||||| ||||||||||    
T  9646304 ttgctctggcttagaaccgggccaccgcaagtgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 13017836 - 13017909
Alignment:
Q  182 aacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||||||||| ||||| |||| |||||||| ||||||||||||| | |||||||| |||||||||||||    
T  13017836 aacgggacccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatc-gataccgagtttt 13017909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 33289209 - 33289251
Alignment:
Q  214 gtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  33289209 gtcccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 37302627 - 37302684
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||| ||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  37302627 tgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 42508466 - 42508382
Alignment:
Q  171 ctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    ||||| ||||||| ||| ||||| ||| |||||||| ||||||||||||||| |||||||| || || |||  ||||||||||||    
T  42508466 ctctgactttaaatgggccccccacaagtgggcggttgaattggtcccctcgaattagtcggttattagattagataccgagttt 42508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 29875899 - 29875825
Alignment:
Q  133 tggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggt 206  Q
    ||||||||||||||||||||||||| |||||||| |||| |||| ||||||| ||  ||||||||| | ||||||    
T  29875899 tggtgccaatttcggtgggctaagtccatacagagcttgttctgactttaaatggaacccccgcaagttggcggt 29875825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 7093511 - 7093568
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| ||||||||| ||| |||||||| | ||||||||||||| ||||||||    
T  7093511 tgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagtttt 7093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 10125879 - 10125952
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtcatacagaac-ttgctctggctttaaacggggccc 191  Q
    ||||| |||||| |||||||||||||| |||||| | | |||||||| | ||||||| ||||||||||||||||    
T  10125879 ggtttgattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccc 10125952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 28791184 - 28791311
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatt 226  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| ||||||||||||||| ||| | || ||| |||||||||  |||||| |  ||| |||    
T  28791184 cctctggtgtcaatttcggtggg-taagtctatacaaaactttgctctggctttaaac-gggtctccacaagtgggcggtgagattggttctttcgaatt 28791281  T
Q  227 agtcgattcttggatcggataccgagtttt 256  Q
    ||||| | |||| |||||||| ||||||||    
T  28791282 agtcggtccttgaatcggatatcgagtttt 28791311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 24672337 - 24672305
Alignment:
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  24672337 attagtcgattcttggatcggataccgagtttt 24672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 8442101 - 8442050
Alignment:
Q  205 gtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||| |||||||||||||||||| | ||||||||||||| ||||    
T  8442101 gtgggattggtctcctcggattagtcgattcctagatcggataccgaatttt 8442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 6204219 - 6204181
Alignment:
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  6204219 cctcggattagtcgattcttgaatcggatactgagtttt 6204181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 24273292 - 24273418
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattag 228  Q
    ||||||||| || |||||||||| ||  |||||| ||||| ||| | | |||||| ||||| | ||||| |||| ||| | |||| |||| || ||||||    
T  24273292 ctctggtgctaagttcggtgggcaaatccatacaaaactttgctatagttttaaatggggctctcgcaagtgggtggtaggattgatcccatcagattag 24273391  T
Q  229 tcgattcttggatcggataccgagttt 255  Q
    ||| | |||||||| ||||||||||||    
T  24273392 tcggtccttggatcagataccgagttt 24273418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 45302947 - 45303032
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtg-gaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    ||||| |||||||| |||||| | |||| ||| ||||| || ||||||  |||||||||||| ||||||| ||||||||||||||||    
T  45302947 gctctagctttaaatggggcctc-gcaagtggacggtgagatttggtcatctcggattagtcaattcttgaatcggataccgagttt 45303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 46070246 - 46070284
Alignment:
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  46070246 cctcggattagtcgatccttgggtcggataccgagtttt 46070284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 3391534 - 3391446
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| |||||||   | ||||||| | |||||  ||||||||||||| |||||||| |  ||| ||| |||||||||||||    
T  3391534 ttgctctggcttaaaacgggattctcgcaaatagacggtgagattggtcccctcgaattagtcggtcattgaatcagataccgagtttt 3391446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 21621680 - 21621732
Alignment:
Q  203 cggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||| |||||||||||| || | |||||||| |||| |||||||    
T  21621680 cggtggaattggttccctcggattagccggtccttggatcagatatcgagttt 21621732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 42245840 - 42245868
Alignment:
Q  224 attagtcgattcttggatcggataccgag 252  Q
    |||||||||||||||||||||||||||||    
T  42245840 attagtcgattcttggatcggataccgag 42245868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 43352399 - 43352339
Alignment:
Q  196 aaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| ||||  ||||||| |||| ||||| |||||||||| ||| |||||||||||||    
T  43352399 aaatgggaggtgagattggtctcctcagattaatcgattcttgaatcagataccgagtttt 43352339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 44946185 - 44946053
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  44946185 attccctttggtgccaatttcggtgggctaagtccatacagaacttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcgg 44946086  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  44946085 attagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 35171865 - 35171997
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  35171865 attccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 35171964  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  35171965 attagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 11941348 - 11941210
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    |||| |||||||| |||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  11941348 ggttcaattccctatggtgccaattttggtgggttaagtccatacagagcttgctctggctttaaacgggacccccgcaagtgggcggtgggattggtcc 11941249  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11941248 cctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 15038024 - 15038156
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||| |||||||||| |||||||||||| |    
T  15038024 attccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcag 15038123  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  15038124 attagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 33827705 - 33827573
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||| |||| |||||||||| ||||||||||| ||    
T  33827705 attccctctggtgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacgggacccctgcaagtgggcggtgggattggtccccttgg 33827606  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  33827605 attagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 30466962 - 30466830
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||| |||| ||||||||| ||||    
T  30466962 attctctctgctgccaatttcggtgggctaagtccatacagagcttgctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcgg 30466863  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  30466862 attagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 24196069 - 24196199
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||    
T  24196069 attccctctggtgcaaatttcggtgggctaagtccatacagaacttgctctggctttaaacggg--ccccgcaagtgggcggtgggattggtcccctcgg 24196166  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| || ||| ||||||||||||||    
T  24196167 attagtcgattttttgattggataccgagtttt 24196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 256
Target Start/End: Original strand, 28668946 - 28669070
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    |||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  28668946 tggtgccaatttcggtggactaagtccatacagagcttgctttggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcg 28669045  T
Q  232 attcttggatcggataccgagtttt 256  Q
    ||| |||||||||||||||||||||    
T  28669046 atttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 36242444 - 36242319
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||||||||||||||| |  |||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  36242444 attccctctggtgtcaatttcggtgggctaagtccagccagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcgg 36242345  T
Q  224 attagtcgattcttggatcggatacc 249  Q
    |||| |||||||||||||||||||||    
T  36242344 attaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 3943810 - 3943937
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattag 228  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||| |||||||    
T  3943810 ctctggtgccaatttcggttggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattag 3943909  T
Q  229 tcgattcttggatcggataccgagtttt 256  Q
    ||| || |||||||||||||| ||||||    
T  3943910 tcggttattggatcggataccaagtttt 3943937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 34516530 - 34516414
Alignment:
Q  140 aatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttg 238  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  34516530 aatttcggtgggctaagtccatacagagcttgctctcgctttaaacggg-cccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 34516432  T
Q  239 gatcggataccgagtttt 256  Q
    ||||||||||| ||||||    
T  34516431 gatcggataccaagtttt 34516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 25293231 - 25293356
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||| |||| |||||| ||| |||||||||||||    
T  25293231 attccctctggtgccaatttcggtgggctaagttcata--------gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcg 25293322  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||||    
T  25293323 gattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 43374457 - 43374330
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||     |||||||||| || ||||||| ||||||||| ||||    
T  43374457 attccctctggtgccaatttcggtgggctaagtttatacaaagcttgctctggctttaa-----gcccccgcaagtgagcggtgggattggtcccttcgg 43374363  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  43374362 attagtcgattcttggatcggataccgagtttt 43374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 27269467 - 27269344
Alignment:
Q  134 ggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcga 232  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||||| |  | ||||||| |||||||||| |||| ||||||||||||||||||    
T  27269467 ggtgtcaatttcggtgggctaagtccatatagaacttgctctggctttaaacagccctcccgcaagtgggcggtgggattgatcccctcggattagtcga 27269368  T
Q  233 ttcttggatcggataccgagtttt 256  Q
    ||||||||| ||||||||||||||    
T  27269367 ttcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 2140615 - 2140486
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||||||||| ||||||||||||    |||| ||||||| ||||||||||||||||| ||| ||||| |||| |||||||||| |||||||||||||    
T  2140615 attccctctggtgtcaatttcggtgg----agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggcggtgggattggtcccctcg 2140520  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| |||||||||||||||||||||    
T  2140519 gattagtcgattattggatcggataccgagtttt 2140486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 17324831 - 17324961
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||| ||| |||||||||| ||| ||||||||      
T  17324831 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaa-tgggcccccacaagtgggcggtgggattagtcccctcaa 17324929  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||| ||||||||    
T  17324930 attagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 41329908 - 41330039
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||| || |||||||||| ||| ||| ||||||||||||||||| ||||||||| ||| |||||||||  |||||||||||| |    
T  41329908 attccctctggtgccaattttggcgggctaagtccata-agagcttgctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcag 41330006  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||| |||||||||||||||    
T  41330007 attagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 44976286 - 44976172
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggc-ccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||| |||||||| |||||||||| |||| |||| |||    
T  44976286 attccctctggtgccaattttggtgggctaagtccatacagagtttgctctggctttaaacggggctccccgcaagtgggcggtgggattgatcccttcg 44976187  T
Q  223 gattagtcgattctt 237  Q
    |||||||||||||||    
T  44976186 gattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 8258962 - 8259094
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||  |||||||| |||||| |||||| ||||||| |||| ||||||||||| |||||||||||||| | |||||||| ||| || || ||||    
T  8258962 attccctctgacgccaattttggtgggttaagtccatacagatcttgttctggctttaatcggggcccccgcaagtaggcggtgggattagttccttcgg 8259061  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||| |||||||    
T  8259062 attagtcgattcttggatcggatactgagtttt 8259094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 13266555 - 13266686
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||   ||| ||||||||||||      
T  13266555 attcactctggtgccaattccggtggactaagtccatacagagcttgctctggctttaaacggggcccc-gcaagtgggtaatgggattggtcccctcaa 13266653  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||| ||||||||    
T  13266654 attagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 36390696 - 36390569
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||||||||||||||||||| ||||||| ||||| | ||||||||| ||||||| ||| ||||||||| |||||||||| ||||||||| |||||| |    
T  36390696 cctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggacccccgcaagtgggcggtgggattggtccc-tcggatca 36390598  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||| |||||||||||||||||    
T  36390597 gtcgatacttgaatcggataccgagtttt 36390569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 41314057 - 41314188
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||  ||| |||| ||| |||||| |||||||||||| |    
T  41314057 attccctctggtgtcaatttcggtgggctaagtctatacagagcttgctctgactttaaacgggatccc-gcaagtggacggtgggattggtcccctcag 41314155  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||| ||||||||||| ||||||    
T  41314156 attaatcgattcttcgatcggataccaagtttt 41314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 714244 - 714125
Alignment:
Q  138 ccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattct 236  Q
    ||||||||||||||||||||| ||| |||  |||||||| |||||||||| |||||||||||||||||||||  || |||||||| ||||||||||||||    
T  714244 ccaatttcggtgggctaagtccatagagagtttgctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattct 714145  T
Q  237 tggatcggataccgagtttt 256  Q
    | ||| ||||||||||||||    
T  714144 tagattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 19054084 - 19054223
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtc 216  Q
    ||||| ||||| |||||||  || |||||||||||||||| ||||||| |||||| |||||||||| ||  ||||| |||| |||||||||| |||||||    
T  19054084 ggtttgattccttctggtgttaacttcggtgggctaagtccatacagagcttgctttggctttaaatggaaccccccgcaagtgggcggtgggattggtc 19054183  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    | |||||||||||||||||||||||| |||||||||||||    
T  19054184 cgctcggattagtcgattcttggatcagataccgagtttt 19054223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 5394082 - 5394214
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||| ||||||||||| |||||||  |||||||| ||||||| |||||| |||||| |||||||||| ||||||||  ||||    
T  5394082 attccctctggtgtcaatttcgatgggctaagtccatacagagtttgctctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcgg 5394181  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||| ||||||||||||| ||||    
T  5394182 attagtcggtccttagatcggataccgaatttt 5394214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 126 - 256
Target Start/End: Original strand, 1191579 - 1191710
Alignment:
Q  126 ttccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    |||||||| || ||||||||||||||||||||| |||||||  ||||||||||||||||||| | ||||| || ||  ||||||||||| |||||||| |    
T  1191579 ttccctctagtaccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggtgtccccgaaagtgaacggtggaattgttcccctcgaa 1191678  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| || ||||||| ||||    
T  1191679 ttagtcgattcttggaccgaataccgaatttt 1191710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 4567565 - 4567429
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcg--------gtggaattggtcccc 219  Q
    ||||||||||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||| ||| ||||||        |||| |||||||| |    
T  4567565 cctctggtgccaatttcggtgggctaaatccatacagagcttgttctggctttaaacggggcccccacaagtgggcggtgggattgtgggattggtcctc 4567466  T
Q  220 tcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  4567465 tcggattagtcaattcttggatcggatacccagtttt 4567429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 10582122 - 10582014
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||| ||||| ||||| |||| |||||||||||||     
T  10582122 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctagctttaaac-gggccctcgcaagtgggc-gtgggattggtcccctcga 10582025  T
Q  224 attagtcgatt 234  Q
    |||||||||||    
T  10582024 attagtcgatt 10582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 27290653 - 27290771
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |              ||||||||||    
T  27290653 attcccttcggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagt--------------gtcccctcgg 27290738  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  27290739 attagtcgattcttggatcggataccgagtttt 27290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 44610139 - 44610236
Alignment:
Q  159 atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||| |||||||| |||||||| |||| |||||||||| ||||||||| |||||||||||| |||||||| || ||||||||||||    
T  44610139 atacagagcttgctctagctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 45271449 - 45271574
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||| |||| || |||| |  |||| |||||||      
T  45271449 attccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacgaagcccctgcaagtgagcggagagattgatcccctcaa 45271548  T
Q  224 attagtcgattcttggatcggatacc 249  Q
    |||||||||||||| ||| |||||||    
T  45271549 attagtcgattctttgattggatacc 45271574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 14486948 - 14487022
Alignment:
Q  182 aacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||    
T  14486948 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 14487022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 8192483 - 8192352
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||| ||||||||| ||||| ||| ||| ||| ||||||||||  |||||  ||| ||||| |||||||||| ||||| |||||||    
T  8192483 attccctctggtgccaatgtcggtgggc-aagtccatatagagctttgctctggcttagaacggc-ccctcgcaagtgggcggtgggattgggcccctcg 8192386  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| | ||||||||||||||||||||||    
T  8192385 gattagtcggtccttggatcggataccgagtttt 8192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 31778139 - 31778228
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||| ||||||||||||| ||| |||||  |||||||| ||| ||||||||  ||||||||||||||||||||||||    
T  31778139 cttgctctggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 44929923 - 44929846
Alignment:
Q  179 ttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| ||||||||| ||| |||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  44929923 ttaaacgggacccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 18692090 - 18692157
Alignment:
Q  189 cccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 45132398 - 45132477
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggatacc 249  Q
    |||||||||||||||||||||||| ||| ||||| || | |||||||| ||||||||| |||||||||||||||||||||    
T  45132398 gctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 4852649 - 4852726
Alignment:
Q  178 tttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  4852649 tttaaacggggcccc-gcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 9401047 - 9400961
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||| ||||| |||| ||||||  |||  |||||||||||||||||||||||||| |||||||    
T  9401047 gctctggctttaaacagggcccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagtttt 9400961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 18976521 - 18976455
Alignment:
Q  190 ccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 18976455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 19849912 - 19850029
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||| | ||| ||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||  |||||||| |||  |||| |||||||||    
T  19849912 caattttgatggactaagtctatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattctt 19850011  T
Q  238 ggatcggataccgagtttt 256  Q
    ||||| ||||| |||||||    
T  19850012 ggatc-gatactgagtttt 19850029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 4769265 - 4769354
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggata 247  Q
    |||||||| |||||||||||||||||||||| |||||||| ||| |||||   |||||||||||  |||||||||||||| |||||||||    
T  4769265 catacagagcttgctctggctttaaacgggggccccgcaagtggacggtgaggttggtcccctcaaattagtcgattcttagatcggata 4769354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 19174828 - 19174959
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||| ||||||||||||||||||||| || ||| ||||||| ||| ||||||||||  ||||| ||||| | ||||||||||||| |||| ||||||||    
T  19174828 attccttctggtgccaatttcggtggg-taggtccatacagagctttgctctggcttagaacggagcccc-gtaaatgggcggtgggattgatcccctcg 19174925  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||| | ||||||||||||||||| ||||    
T  19174926 gattaatcggtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 5608166 - 5608038
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||||||| |||||| ||||||||||||| ||| ||| ||||||||| |||||||||| || ||| ||||||| ||| || |||| |||| || |    
T  5608166 attctctctggtgtcaattttggtgggctaagtccatatagagcttgctctgactttaaacggagctcccacaaatggtcggcgggattgatcccttcag 5608067  T
Q  224 attagtcgattcttggatcggataccgag 252  Q
    || |||||||| ||| |||||||||||||    
T  5608066 atgagtcgattattgaatcggataccgag 5608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 23787146 - 23787012
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtgg---aattgg 214  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||  |||||||| ||||||| ||| || |||||| ||||||||||   ||||||    
T  23787146 ggtttgattccctctggtgccaatttcggtgggctaaatccatacagagtttgctctgactttaaatgggacctccgcaagtgggcggtggtgaaattgg 23787047  T
Q  215 tcccctcggattagtcgattcttggatcggatacc 249  Q
    |  | ||| |||||||  ||||| |||||||||||    
T  23787046 tttcttcgaattagtcagttcttagatcggatacc 23787012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 6714380 - 6714295
Alignment:
Q  171 ctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||||||||| | ||||||| ||| |||||  ||||||||||||  |||||||||||||||||| ||||||||||||||    
T  6714380 ctctcgctttaaacgggactcccgcaagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 39957891 - 39957955
Alignment:
Q  192 ccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  39957891 ccgcaagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagtttt 39957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 1845103 - 1845049
Alignment:
Q  202 gcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  1845103 gcggtggaattggtcccctcaaattagtcgattcttggctcggataccgagtttt 1845049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 28194212 - 28194138
Alignment:
Q  182 aacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| | |||||||| ||||||| | || ||||||||| | ||||||||||||||||||||||    
T  28194212 aacggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcggataccgagtttt 28194138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 29361622 - 29361745
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattag 228  Q
    |||||| || |||||||||||| |||||||   |||| |||||  ||||||||||||| ||||| |||| ||||| |||| |||| || ||||||||||     
T  29361622 cctctgatgtcaatttcggtggactaagtc---cagagcttgccgtggctttaaacggagcccc-gcaagtgggcagtgggattgatctcctcggattaa 29361717  T
Q  229 tcgattcttggatcggataccgagtttt 256  Q
    | ||||| ||||||||||| ||||||||    
T  29361718 ttgattcctggatcggatatcgagtttt 29361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 1501509 - 1501464
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  1501509 attggtcccctcggattagtcgattctt-gatcggataccgagtttt 1501464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 14946849 - 14946975
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagtc-atacagaact-tgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||||| ||||||| |||||||||||| |||| || || |||||| |||||||||||  |||||  || | ||| |||| |||||||||||| |||||    
T  14946849 ctctggtgtcaatttcagtgggctaagtccatacggagctatgctctagctttaaacggacccccc--aagtaggcagtgggattggtcccctcagatta 14946946  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||  || |||||||||| ||||||||||    
T  14946947 gtcagtttttggatcggagaccgagtttt 14946975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 18708544 - 18708649
Alignment:
Q  127 tccctctggtgccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    |||||||| | |||||||| ||||||    ||||||||| ||| |||||| ||| ||||||| ||||||||||||| |||||| |||| ||||||| |||    
T  18708544 tccctctgataccaatttcagtgggcatgttcatacagagctttgctctgacttaaaacgggacccccgcaaatggacggtgggattgatcccctcagat 18708643  T
Q  226 tagtcg 231  Q
    ||||||    
T  18708644 tagtcg 18708649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 32845194 - 32845254
Alignment:
Q  177 ctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||| ||||||| |||| |||||||||| ||||||||| ||| ||||||||||||||    
T  32845194 ctttaaacagggcccctgcaagtgggcggtgggattggtcccttcgaattagtcgattctt 32845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 40997483 - 40997358
Alignment:
Q  124 aattccctctggtgccaatttcggtgggctaagtca-tacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||| || || |||||||||||| | ||||||| |||||| ||||||||| ||||||||||| |||        ||||||||| |||||||||  ||    
T  40997483 aattccccctagtaccaatttcggtgagataagtcaatacagagcttgctctgactttaaacgggcccc--------gggcggtgggattggtcccaacg 40997392  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
     ||||||||||||| | ||||| |||||||||||    
T  40997391 aattagtcgattctcgaatcgggtaccgagtttt 40997358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 8299904 - 8299859
Alignment:
Q  211 ttggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||    
T  8299904 ttggtcccttcggattagttgattcttgaatcggataccgagtttt 8299859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 256
Target Start/End: Original strand, 29698207 - 29698343
Alignment:
Q  120 gtttaattccctctggtgccaatttcggtgggctaagtcatacagaacttg-ctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    |||| ||| ||||||||| |||||||||||||| |  ||||||||| |||  ||||| ||| |||| || |||| ||||||||||| ||  |||||||||    
T  29698207 gttttatttcctctggtgtcaatttcggtgggcaagttcatacagagctttactctgacttaaaacaggacccc-gcaaatgggcgatgagattggtccc 29698305  T
Q  219 ctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| || ||| | | ||| ||||| ||||||||||||    
T  29698306 ctcgaataagttggtccttagatcgtataccgagtttt 29698343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 32845156 - 32845189
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc 158  Q
    ||||||||||||||||||||||||||||||||||    
T  32845156 attccctctggtgccaatttcggtgggctaagtc 32845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 12360342 - 12360296
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| ||||||||||||||||  |||||||||||||||| ||||    
T  12360342 attggtctcctcggattagtcgatctttggatcggataccgaatttt 12360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 13089012 - 13089077
Alignment:
Q  191 cccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||||  |||||||| ||| ||||| ||| || |||| ||||||||||||||||    
T  13089012 cccgcaagtgggcggtgagattggtcctctcagattattcggtttttgggtcggataccgagtttt 13089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 13747553 - 13747500
Alignment:
Q  203 cggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||||| |||||| |||| |||||| ||||||||||||||||| ||||    
T  13747553 cggtgggattgggcccctcagatttgtcgatccttggatcggataccgaatttt 13747500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 19605903 - 19605846
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||  ||||||||||||| |||||| ||  ||||||||||||| ||||||||    
T  19605903 tgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagtttt 19605846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 10325030 - 10325090
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtt 254  Q
    |||| ||| ||||||||||||||||||| ||||||||   |||||||| ||||| ||||||    
T  10325030 gcaattggacggtggaattggtcccctcagattagtcagctcttggattggatatcgagtt 10325090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 8e-55; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 4621369 - 4621237
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  4621369 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcgg 4621270  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  4621269 attagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 24122088 - 24122220
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  24122088 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcgg 24122187  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  24122188 attagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 24674458 - 24674590
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  24674458 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgt 24674557  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  24674558 attagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7766859 - 7766727
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  7766859 attccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 7766760  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||| ||||||||    
T  7766759 attagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 15059534 - 15059402
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| |||||||||  |||||||||||||     
T  15059534 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcga 15059435  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  15059434 attagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 130 - 256
Target Start/End: Complemental strand, 8254879 - 8254752
Alignment:
Q  130 ctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattag 228  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| | |||||    
T  8254879 ctctggtgtcaatttcggtgggctaagttcatacagaacttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattag 8254780  T
Q  229 tcgattcttggatcggataccgagtttt 256  Q
    |||||||||| |||||||||||||||||    
T  8254779 tcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 17935834 - 17935965
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| ||| |||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||    
T  17935834 attccttctagtgccaatttcggtgggctaagtccatacagagtttgctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcgg 17935933  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  17935934 attagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 30677235 - 30677373
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| ||| ||||||||| |||||||||| ||||||||    
T  30677235 ggtttgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggattggtcc 30677334  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||| |||||||| |||||| ||||||||    
T  30677335 cctcagattagtcggttcttggaccggatatcgagtttt 30677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7197378 - 7197247
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtca-tacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| |||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||| |||| |||||||||  ||||||||||||||    
T  7197378 attccctctgatgccaatttcggtggg-taagtcaatacagaccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcgg 7197280  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| ||||||||||||||||||||    
T  7197279 attagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 9500487 - 9500355
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||| |||||||||  ||||||| | ||||    
T  9500487 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggagcccccacaagtgggcggtgagattggtctcttcgg 9500388  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||| ||||||||    
T  9500387 attagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 8077712 - 8077841
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||||| |||||||||||| |    
T  8077712 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctc-g 8077810  T
Q  224 attagtcgattcttggatcggataccgagtt 254  Q
    |||| |||||| |||||||||| ||||||||    
T  8077811 attaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 1378967 - 1379090
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||  |||||||||||| |||||    
T  1378967 cctctggtgtcaatttcggtgggctaagtccatacagaacttgctctggctttaaacggg-cccccgcaagtggacggtgagattggtcccctcagatta 1379065  T
Q  228 gtcgattcttggatcggataccgag 252  Q
    |||||||||| ||||||||||||||    
T  1379066 gtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 7578474 - 7578606
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||||||||||| ||||| | ||||||||| ||||||||||||||| ||||| |||| ||||| |||||| |||||||    
T  7578474 attccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcgg 7578573  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||| |||||||||||||||||||||    
T  7578574 attagttgatttttggatcggataccgagtttt 7578606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 46607875 - 46608007
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||  ||||||||| |||||||||| |||| |||||||||    
T  46607875 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaaaggcccccccgcaagtgggcggtgggattgatcccctcgg 46607974  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||||||||||||| ||||||||    
T  46607975 attagtcggtccttggatcggatatcgagtttt 46608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 27454998 - 27454864
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc--gcaaatgggcggtggaattggtcccctc 221  Q
    |||| ||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||  |||  |||||||||| ||||||||||||    
T  27454998 attcactctgatgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacgggccccccccgcatgtgggcggtgggattggtcccctc 27454899  T
Q  222 ggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||||    
T  27454898 ggattagtcgattcttggatcggatacctagtttt 27454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 23734181 - 23734314
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||| ||||||||||||||||||||||| |||||||  ||||| || ||||||||||||||||| |||| ||||||||| |||||||||||||     
T  23734181 attccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctca 23734280  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| |||||||||| ||||||    
T  23734281 gattagtcgattcttgaatcggataccaagtttt 23734314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 23741373 - 23741506
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||| ||||||||||||||||||||||| |||||||  ||||| || ||||||||||||||||| |||| ||||||||| |||||||||||||     
T  23741373 attccctctgatgccaatttcggtgggctaagtccatacagagtttgctatgcctttaaacggggccccccgcaagtgggcggtgaaattggtcccctca 23741472  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| |||||||||| ||||||    
T  23741473 gattagtcgattcttgaatcggataccaagtttt 23741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 45859175 - 45859043
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| |||||   |||||||| ||||||||| |||||||||||| |||| ||| | ||||||||||||||    
T  45859175 attccctctggtgccaatttcggtgggctaagtccatacatcgcttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcccctcgg 45859076  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||| |||||||||||||||| ||||    
T  45859075 attagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 119 - 255
Target Start/End: Original strand, 34778401 - 34778535
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    ||||| |||||||||||| ||||||| |||||| |    ||||||||  ||||| |||||||||||||||||||||||| ||| |||||| |||||||||    
T  34778401 ggtttgattccctctggtaccaattttggtgggtttc--catacagagtttgctttggctttaaacggggcccccgcaagtggacggtgggattggtccc 34778498  T
Q  219 ctcggattagtcgattcttggatcggataccgagttt 255  Q
    || ||||||||||||||||||||||||||||||||||    
T  34778499 cttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 32729610 - 32729741
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||| |||||||| |||||||||| |||| |||||| ||    
T  32729610 attccctatggtgccaatttcggtgggc-aagtccatacagagcttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttgg 32729708  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |  |||||||||||||||||||||    
T  32729709 attagtcggtctttggatcggataccgagtttt 32729741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 36156020 - 36155888
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||| ||||| || |||| |||||| | | ||||||| |||||||||||  |||||||||| ||||||||| ||      
T  36156020 attccctctggtgccaatttcggtgggccaagtccatgcagagcttgctttagttttaaacagggcccccgcaggtgggcggtgggattggtcccttcaa 36155921  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  36155920 attagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 18646918 - 18647045
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||| ||||| | || |||||||||  |||| ||||||||     
T  18646918 attctctctggtgccaatttcggtgggctaagtctatacaaagtttgctctggctttaaacggagcccctgtaagtgggcggtgagattgatcccctcga 18647017  T
Q  224 attagtcgattcttggatcggataccga 251  Q
    ||||||||||||||| ||||||||||||    
T  18647018 attagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 8779854 - 8779744
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||||||||||| ||||| | ||| |||| |||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||    
T  8779854 caatttcggtgggctaagtccatacacagcttactctagctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattctt 8779755  T
Q  238 ggatcggatac 248  Q
     ||||||||||    
T  8779754 agatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 45331746 - 45331621
Alignment:
Q  133 tggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggc-ccccgcaaatgggcggtggaattggtcccctcggattagtc 230  Q
    ||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||| ||| |||||| |||  ||||||| ||||| ||    
T  45331746 tggtggcaatttcggtgggctaagtccatacagagcttgctttggctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatc 45331647  T
Q  231 gattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||||||||||||    
T  45331646 gattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 168266 - 168398
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||| | ||||| | ||| |||||| ||||||||||||||    
T  168266 attccctctggtgccaatttcggtgggctaagttcatacagagcttgttctgactttaaacgggactcccgctagtggccggtgggattggtcccctcgg 168365  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||   ||||| || |||||||| ||||||    
T  168366 attagttagttcttagaccggataccaagtttt 168398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 22909979 - 22910068
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||||||||| |||||||||| |||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  22909979 cttgctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 256
Target Start/End: Original strand, 48699859 - 48699956
Alignment:
Q  160 tacagaacttgctctgg-ctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||| |||||||||| |||||||||| |||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||    
T  48699859 tacagagcttgctctgggctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagtttt 48699956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 37351593 - 37351454
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctgg---------ctttaaacggggcccccgcaaatgggcggtggaattgg 214  Q
    ||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||         ||||||||||| ||||| ||| |||||||||| |||||    
T  37351593 attccttctgatgccaatttcggtgggctaagtccatacagagcttgctctggaagctctggctttaaacggg-cccccacaagtgggcggtgggattgg 37351495  T
Q  215 tcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  37351494 tcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 251
Target Start/End: Original strand, 21726794 - 21726921
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||| |||| |||||| ||| ||| |||| ||| |||||||||||| ||||| ||| ||||||||||  ||| ||||||| |    
T  21726794 attccctttggtgccaatttcgatgggttaagtccatatagagcttgttctagctttaaacgggtcccccacaagtgggcggtggggttgatcccctcag 21726893  T
Q  224 attagtcgattcttggatcggataccga 251  Q
    |||| |||||||||||||||||||||||    
T  21726894 attaatcgattcttggatcggataccga 21726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 2272403 - 2272541
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||||||| ||||||||||| |||||||||| |||||| |  |||||||| ||||||||||||||||  |||  ||||||| | |||| |||    
T  2272403 ggtttgattccctctgatgccaatttcgctgggctaagttcatacaaagtttgctctgactttaaacggggcccctacaagggggcggtaggattgatcc 2272502  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    | |||||||||||||||||  |||||||||| |||||||    
T  2272503 catcggattagtcgattctaagatcggatactgagtttt 2272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 26513236 - 26513148
Alignment:
Q  167 cttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  26513236 cttgctctgactttaaacggg-cccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 18533856 - 18533724
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||| |||||||||||| ||| ||||||| ||| ||| |||| |||| |||||||||||||||| |||| ||||| |||| ||||||||||||      
T  18533856 attctctctagtgccaatttcgatggactaagtccatatagagcttgttctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctcat 18533757  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||| ||||||||||| ||||||    
T  18533756 attaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 33905642 - 33905510
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||  ||||||||||||| |||||| |||||||  ||| ||||||||||||||||||| ||| || ||| |||||| |||| |||||||      
T  33905642 attccctctggtatcaatttcggtgggttaagtccatacagagtttgttctggctttaaacggggcctccgtaagtggacggtgggattgatcccctcaa 33905543  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||  ||||||||| ||||||||||||||||||    
T  33905542 atttatcgattctttgatcggataccgagtttt 33905510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 7946909 - 7947011
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |||| |||||||| |||| ||||  |||||||||||| |    
T  7946909 attccctctggtgccaatttcggtgggctaagtctatacagagcttgctctcgctttaaatgggg-ccccgcaagtgggtggtgagattggtcccctcag 7947007  T
Q  224 atta 227  Q
    ||||    
T  7947008 atta 7947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 32930818 - 32930941
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||||||| |||| ||||||||||||| || |||| |||||||||||||||||||||| ||| |||| |||  ||||| |||| ||||||| |||||    
T  32930818 cctctggtgcccattttggtgggctaagtccatgcagagcttgctctggctttaaacggggtccctgcaagtggatggtgggattgatcccctcagatta 32930917  T
Q  228 gtcgattcttggatcggataccga 251  Q
     ||||||||| ||| |||||||||    
T  32930918 atcgattcttagattggataccga 32930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 50202661 - 50202742
Alignment:
Q  174 tggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  50202661 tggctttaaacgggaccctcgcaagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagtttt 50202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 26820286 - 26820384
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||||| ||| |||| |||| |||  |||||||||| || | |||||||||||||||||||||| | ||||||||||||    
T  26820286 catacagaacttgctctgcctttaaatgggacccctgcaagtggatggtggaattgatcgcttcggattagtcgattcttggattgaataccgagtttt 26820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 2537757 - 2537864
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    ||||| ||||| | |||||||||||||||||||||| |||   || | |||||| |||||||||||||| ||||||||| ||||||| || |||||||||    
T  2537757 ggtttgattccatttggtgccaatttcggtgggctatgtc---ca-agcttgctttggctttaaacgggccccccgcaagtgggcggagggattggtccc 2537852  T
Q  219 ctcggattagtc 230  Q
    ||||||||||||    
T  2537853 ctcggattagtc 2537864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 12877034 - 12876965
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    |||||||| |||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  12877034 catacagagcttgctctagctttaaacggggcccccgcaagtggacggtgggattggtcccctcggatta 12876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 1486483 - 1486617
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggccccc--gcaaatgggcggtggaattggtcccct 220  Q
    ||||||| |||||||||||||| |||| |||||| ||||||| ||| |||||| |||  ||||||||||||  |||| ||| |||||| || ||||||||    
T  1486483 attccctttggtgccaatttcgatggg-taagtccatacagagctttgctctgacttagaacggggcccccccgcaagtggacggtgggatcggtcccct 1486581  T
Q  221 cggattagtcgattcttggatcggataccgagtttt 256  Q
    | ||||||||| | ||||||||||||||||||||||    
T  1486582 ccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 243
Target Start/End: Original strand, 16899568 - 16899687
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||| |   |||||| | | ||||||||| ||  ||||||||||| |||| ||| |||||  ||||||||||||||    
T  16899568 attccctctggtgccaatttcggtgggccagtccatacaaagctttgctctggtttagaacggggcccctgcaagtggacggtgagattggtcccctcgg 16899667  T
Q  224 attagtcgattcttggatcg 243  Q
    |||||||| | |||||||||    
T  16899668 attagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 14603947 - 14603993
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagtttt 14603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 23041650 - 23041719
Alignment:
Q  187 ggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||| ||| | |||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  23041650 ggcctccgcaagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 40146014 - 40145889
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccc-----cgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||| ||||||||||  |||||||||||| ||||||| ||||||||| ||||||| ||| ||||     | ||| |||| ||||   ||||||||||||    
T  40146014 cctctagtgccaatttatgtgggctaagtccatacagagcttgctctgactttaaatgggcccccacaaccacaagtgggtggtgagtttggtcccctcg 40145915  T
Q  223 gattagtcgattcttggatcggatac 248  Q
    ||||||||||||||||||||||||||    
T  40145914 gattagtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 23232397 - 23232300
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaactt----gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||||||||| ||||||||||||||||||||| |||||||| |||    |||||||||||||| ||| ||||||||| |||| ||||| ||||||||    
T  23232397 attccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtgggattggtcc 23232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 16539667 - 16539804
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtc 216  Q
    ||||| |||||||||||||||||||| ||||||| ||||| ||||||| ||| || |||||||  ||||||||||  | || |||| ||||| |||||||    
T  16539667 ggtttgattccctctggtgccaattttggtgggc-aagtccatacagagctttgcgctggcttagaacggggccct-gtaagtgggtggtgggattggtc 16539764  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||  |||||||||| |||| |||||||||||| ||||    
T  16539765 ccctcaaattagtcgatacttgtatcggataccgaatttt 16539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 29057469 - 29057363
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||| |||   ||||| ||||||| |||||||||||||| |||||| |||||||||||||||| ||  ||||||||||||      
T  29057469 attccctcttgtgccaatttcgatggta-aagtctatacagagcttgctctggctttcaacgggacccccgcaaatgggcgatgtgattggtcccctcaa 29057371  T
Q  224 attagtcg 231  Q
    ||||||||    
T  29057370 attagtcg 29057363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 35138118 - 35138185
Alignment:
Q  189 cccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||||||||| |||| | ||||||||||||||| | ||||||||||||||||||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 5315482 - 5315528
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  5315482 attggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 27159212 - 27159282
Alignment:
Q  186 gggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||| ||| |||||| |||||||||||| |||||||||||  |||||||||||| ||||||||    
T  27159212 gggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagtttt 27159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 40802166 - 40802069
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| ||||||||| ||||||||||| |||| |||| |||| ||||  |||||||| || | ||||||||||||||| |||| ||||||||||||    
T  40802166 catacagagcttgctctgactttaaacgggtcccc-gcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 6776201 - 6776277
Alignment:
Q  180 taaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| | ||||||||||||| ||| ||| |||||||||||| ||| |||| ||||||| ||||    
T  6776201 taaacggggcccccgcaagtaggcggtggaattgatccactcagattagtcgattattgtatcgaataccgaatttt 6776277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 9926234 - 9926146
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||  ||||| |||||||||| |||||||||| |||| |||| |  ||||||||| | ||| ||||||||||||||||||    
T  9926234 ttgctctggcttagaacggagcccccgcaactgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagtttt 9926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 809357 - 809419
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||| || ||||| |||||||||||||||| |||||| |||||||    
T  809357 gcaaatgggcggtgggattggttccttcggagtagtcgattcttggattggatactgagtttt 809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 52135234 - 52135323
Alignment:
Q  168 ttgctctggcttt-aaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||| ||| || ||| | |||| ||| |||||| ||||||||||||  |||||||| |||||||||||||||| |||||||    
T  52135234 ttgctctggcttttaaatggagccactgcaagtggacggtgggattggtcccctcatattagtcggttcttggatcggatactgagtttt 52135323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 43770031 - 43769975
Alignment:
Q  190 ccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggat 246  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  43770031 ccccacaaatgggcggtgggattggtcccttcgaattagtcgattctaggatcggat 43769975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 1818808 - 1818905
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||| |||||||||||||| ||||||||| | || |     ||||||| | ||||||||||| ||| |||||||||||||||||||||    
T  1818808 catacagagcttgctttggctttaaacggg-cccccgcaagtaggtgacatgattggtcacatcggattagtcaattattggatcggataccgagtttt 1818905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 248
Target Start/End: Complemental strand, 25237121 - 25236997
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||||||| |||||||||||||||||| ||||| |||||||  || |||||| |||  || || ||| |||||| ||| ||||||||||||||| |||     
T  25237121 attccctctagtgccaatttcggtgggc-aagtccatacagagttttgctctgacttagaatggtgcctccgcaagtggacggtggaattggtcctctca 25237023  T
Q  223 gattagtcgattcttggatcggatac 248  Q
     |||||||| | ||| ||||||||||    
T  25237022 tattagtcggtcctttgatcggatac 25236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 1095129 - 1095013
Alignment:
Q  131 tctggtgccaatttcggtgggctaagt-catacagaactt----gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggat 225  Q
    |||||||||||||||||||||| |||| |||||||| |||    ||||||||||  ||||||||||| |||| ||||   ||| |||||| |||||||||    
T  1095129 tctggtgccaatttcggtgggc-aagtacatacagagctttgcagctctggcttagaacggggcccc-gcaagtggg---tgggattggttccctcggat 1095035  T
Q  226 tagtcgattcttggatcggata 247  Q
    |||||| | ||| |||||||||    
T  1095034 tagtcggtccttagatcggata 1095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 39964571 - 39964605
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggct 153  Q
    ||||| |||||||||||||||||||||||||||||    
T  39964571 ggtttgattccctctggtgccaatttcggtgggct 39964605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 46113534 - 46113501
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc 158  Q
    |||||||||||| |||||||||||||||||||||    
T  46113534 attccctctggtaccaatttcggtgggctaagtc 46113501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 20999296 - 20999188
Alignment:
Q  124 aattccctctggtgccaatttcggtgggctaagtcatacagaacttg-ctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    ||||| || |||| |||||||||||||||||   |||||||| |||  | |||||||||||   ||| ||| ||| ||| |||||| ||||| |||||||    
T  20999296 aattctctgtggtaccaatttcggtgggctagtccatacagagctttacgctggctttaaataaggctccctcaagtggacggtggtattggacccctcg 20999197  T
Q  223 gattagtcg 231  Q
    |||||||||    
T  20999196 gattagtcg 20999188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 31162859 - 31162947
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||| ||||||| | ||| || || |||  |||||||  |||  |||||||||| |||| |||||||||||||||||    
T  31162859 ttgctctagctttaaatggggcccacacaagtgagcagtgagattggtcatctctaattagtcgatccttgaatcggataccgagtttt 31162947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 36921596 - 36921513
Alignment:
Q  172 tctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||||||||||| ||| ||||| |||| ||| |||||| ||| ||||| ||  ||||||||||| ||| ||||||||||||||||    
T  36921596 tctggctttaaatgggaccccccgcaagtggacggtgggattagtccc-tcaaattagtcgattattgaatcggataccgagttt 36921513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 39714738 - 39714650
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||||| ||| ||||| ||| |||  ||||| ||||| | |||||||||||||| | |||||   ||||||||||||||    
T  39714738 ttgctctggatttaaatgggccccccacaagtggatggtgggattggactcctcggattagtcggtccttgggctggataccgagtttt 39714650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 47091742 - 47091818
Alignment:
Q  180 taaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| |||||||||| |||| ||||| ||||||||  |||  |||||  |||||||||||||||| ||| ||||    
T  47091742 taaacggagcccccgcaagtggggggtgggattggtccattcgatttagtaaattcttggatcggatatcgaatttt 47091818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 10190880 - 10190742
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  10190880 ggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcc 10190781  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10190780 cctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 8456282 - 8456150
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  8456282 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcgg 8456183  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  8456182 attagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 35492976 - 35493108
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  35492976 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 35493075  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| | ||||||||||||    
T  35493076 attagtcgattcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 40133581 - 40133449
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  40133581 attccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcga 40133482  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  40133481 attagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 49258394 - 49258262
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  49258394 attccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggcggtgggattggtcccctcgg 49258295  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  49258294 attagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 10083957 - 10083819
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| ||| |||||| ||||||||    
T  10083957 ggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacggtgggattggtcc 10083858  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10083857 cctcggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 18177019 - 18176887
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  18177019 attccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcgg 18176920  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||| |||||||    
T  18176919 attagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 45272548 - 45272416
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  45272548 attccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 45272449  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| || |||||||||||||||||||||||    
T  45272448 attagttgactcttggatcggataccgagtttt 45272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 46576413 - 46576545
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||| ||    
T  46576413 attccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttgg 46576512  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  46576513 attagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 8097411 - 8097279
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||| ||||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8097411 attccctcttgtgctaatttcgatgggctaagtccatacagagcatgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 8097312  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  8097311 attagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 15566631 - 15566500
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |    
T  15566631 attccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggg-cccccgcaagtgggcggtgggattggtcccctcag 15566533  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  15566532 attagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 25289846 - 25289715
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||     
T  25289846 attccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcga 25289748  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  25289747 attagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 26174182 - 26174310
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||    
T  26174182 cctctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggatta 26174281  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||    
T  26174282 gtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 32151489 - 32151621
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaag-tcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||     
T  32151489 attctctctagtgccaatttcggtgggctaagctcatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcga 32151588  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  32151589 attagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 39041984 - 39041852
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||    
T  39041984 attctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattggtccactcgg 39041885  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  39041884 attagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 52821767 - 52821636
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| | || |||||||||| ||||||||||||||    
T  52821767 attccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccc-gtaagtgggcggtgggattggtcccctcgg 52821669  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  52821668 attagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 53234042 - 53233911
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  53234042 attctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 53233943  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  53233942 attagtcgattctt-gatcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 30807285 - 30807153
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccccc-gcaaatgggcggtggaattggtcccctcg 222  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| |||||||| | ||||||||| |||    
T  30807285 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggcggtaggattggtccc-tcg 30807187  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||||    
T  30807186 gattagtcgattcttggatcggataccgagtttt 30807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 21363008 - 21363140
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||| |||||||    
T  21363008 attccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcgg 21363107  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||||||||||||||||||||||    
T  21363108 attaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 30257689 - 30257821
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  30257689 attccctttggtgccaatttcgatggactaagtccatacagagcttgctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcgg 30257788  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  30257789 attagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 45529886 - 45529755
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  45529886 attccctctggagccaatttcgatgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcgg 45529787  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  45529786 attagtcgattctt-gatcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 48977453 - 48977585
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  48977453 attccttctggtgccaatttcggtgggttaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcgg 48977552  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| | ||||||||||||||||||||||    
T  48977553 attagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 25379826 - 25379957
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||| ||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  25379826 attccttctagtgccaatttcggagggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcgg 25379925  T
Q  224 attagtcgattcttggatcggataccgagttt 255  Q
    ||||||||||||||||||||||||| ||||||    
T  25379926 attagtcgattcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 53424308 - 53424177
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| |||||||||||||||||||||||||| |||||||  ||||| |||||||||||||| ||||||||| || ||||||| ||||||||||||||    
T  53424308 attccctttggtgccaatttcggtgggctaagtccatacagagtttgctatggctttaaacggg-cccccgcaagtgagcggtgggattggtcccctcgg 53424210  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  53424209 attagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 24407326 - 24407458
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||| ||||||||| |||||||||||| |||||  |||||||| |||||||| ||||||||||||||  ||||| |||||||||| ||||||||||||||    
T  24407326 attctctctggtgctaatttcggtgggttaagtatatacagaatttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcgg 24407425  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  24407426 attagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 34492707 - 34492575
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||  || |    
T  34492707 attccctctgctgccaatttcgttgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcag 34492608  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||||||| |||||||||||||    
T  34492607 attagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 31537975 - 31537838
Alignment:
Q  120 gtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtccc 218  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||| ||||| |||| |||||||||  |||||||||    
T  31537975 gtttgattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacggagcccctgcaagtgggcggtgagattggtccc 31537876  T
Q  219 ctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||| |||||||||||||||| ||||||||    
T  31537875 ctcgaattagtcaattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 33398600 - 33398468
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| |||||||||| |||||| || ||| ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||     
T  33398600 attccctctagtgccaattttggtgggttatgtccatacagagcttgctctagctttaaacggggcccccgcaagtgggcggtgggattggttccctcga 33398501  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||| ||||    
T  33398500 attagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 52455781 - 52455649
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||| | ||||||||||| | ||||| ||||||||| ||||||||||||||||||||| ||   ||||| ||||||||||||||    
T  52455781 attccctctggtgccaattttgatgggctaagtctacacagagcttgctctgactttaaacggggcccccgcaagtgactggtgggattggtcccctcgg 52455682  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||||||||||||    
T  52455681 attagtcgattcttggattggataccgagtttt 52455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 2511429 - 2511297
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||||||||||||||||||||||||| |||||||| || |||||| ||||||||||| || |||||| |||||||||| ||||||| |||||     
T  2511429 attccctctggtgccaatttcggtgggctaagttcatacagagctcgctctgactttaaacgggacctccgcaagtgggcggtgggattggtctcctcga 2511330  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||| |||||||| |||||||||| ||||||    
T  2511329 attagtagattcttgaatcggataccaagtttt 2511297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 24165812 - 24165715
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  24165812 catacagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagtttt 24165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 40940890 - 40941022
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| ||| |||| ||| | |||||||||||||     
T  40940890 attccctctggtgccaatttcggtggactaagtccatacagagcttgctctgactttaaacggggcccccacaagtgggtggtaggattggtcccctcga 40940989  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||| || ||||||| ||| |||||||||||||    
T  40940990 attactcaattcttgaatcagataccgagtttt 40941022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 54475780 - 54475878
Alignment:
Q  158 catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||| ||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  54475780 catacagagcttgctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 8958164 - 8958035
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaac-ggggcccccgcaaatgggcggtggaattggtcccctcggatt 226  Q
    ||||||||| |||||| ||||||||||||| ||||| | |||||||| ||||||||  ||||||||||||| |||||||||| |||||||||||| ||||    
T  8958164 cctctggtgtcaattttggtgggctaagtccatacaaagcttgctctagctttaaaatggggcccccgcaagtgggcggtgggattggtcccctctgatt 8958065  T
Q  227 agtcgattcttggatcggataccgagtttt 256  Q
    | |||||||||||||| |||||||||||||    
T  8958064 aatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 256
Target Start/End: Original strand, 1692913 - 1693030
Alignment:
Q  139 caatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattctt 237  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| || || ||||||||| |||||||||| ||| | |||||| |||||||||||||||    
T  1692913 caatttcggtggactaagtctatacagaacttgctctggctttagacagg-cccccgcaagtgggcggtgggatttgccccctcagattagtcgattctt 1693011  T
Q  238 ggatcggataccgagtttt 256  Q
    | |||||||||||||||||    
T  1693012 gaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 48104983 - 48105073
Alignment:
Q  165 aacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||||||||||||||||||| |||||||| ||| |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  48104983 aacttgctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 26108357 - 26108441
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtgg 208  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  26108357 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggctgtgg 26108441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 53288844 - 53288713
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||| ||||||| ||||| | |||||| ||||||||||||||||||| ||||| || |||||  ||| |||||||||     
T  53288844 attccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaaacggggcccc-gcaaacggacggtgagattagtcccctcga 53288746  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||| ||||||||| |||| ||||||    
T  53288745 attagtcgattattggatcggttaccaagtttt 53288713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 256
Target Start/End: Original strand, 1178244 - 1178367
Alignment:
Q  132 ctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagt 229  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||  ||  |||||||||| ||||||||| ||||||||||    
T  1178244 ctggtgccaatttcggtgggc-aagtccatacagaactttgctctggctttaaatggggcccca-cacgtgggcggtgggattggtccc-tcggattagt 1178340  T
Q  230 cgattcttggatcggataccgagtttt 256  Q
    ||| |||||||||||||||||||||||    
T  1178341 cgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 1242038 - 1242174
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaac-ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccc--- 219  Q
    |||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||  ||||||| |||||||||||||||||||||       
T  1242038 attccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacgggg-tcccgcaagtgggcggtggaattggtccccttg 1242136  T
Q  220 --tcggattagtcgattcttggatcggataccgagtttt 256  Q
      | |||||||||||||||| ||||||||||| ||||||    
T  1242137 gatgggattagtcgattctt-gatcggataccaagtttt 1242174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 25344195 - 25344058
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||| ||||| ||||||  |||| ||||||| |||||||  |||||||||||||||||||||||||||| | |||||| ||| ||||||      
T  25344195 ggtttgattccctttggtgtcaatttttgtggtctaagtccatacagagtttgctctggctttaaacggggcccccgctagtgggcgatgggattggt-t 25344097  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  25344096 cctcggattagtcgattcttagatcgaataccgagtttt 25344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7485657 - 7485531
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    |||||||||| ||||||||||||||||||||||    || | |||| ||||||||||||| || |||| |||| ||| |||||| ||||||||| |||||    
T  7485657 attccctctgatgccaatttcggtgggctaagtt---catagcttgatctggctttaaacagg-cccctgcaagtggccggtgggattggtccc-tcgga 7485563  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||||    
T  7485562 ttagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 4462698 - 4462829
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||  ||||||||| |||||||||| |||||||| ||| |||| ||||||||||||||||| |||| ||| |||||| |||| ||| |||||    
T  4462698 attccctctggcaccaatttcgatgggctaagttcatacagagcttactctagctttaaacggggcccc-gcaagtggacggtgggattgatccactcgg 4462796  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||  |||||||||| ||||||||||||||    
T  4462797 attagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 29915395 - 29915288
Alignment:
Q  131 tctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagt 229  Q
    |||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||| |||||||||| |||| |||| ||| ||||||    
T  29915395 tctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacggg-cccccgcaagtgggcggtgggattgatcccatcgaattagt 29915297  T
Q  230 cgattcttg 238  Q
    |||||||||    
T  29915296 cgattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 29964548 - 29964441
Alignment:
Q  131 tctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagt 229  Q
    |||||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||| |||||||||| |||| |||| ||| ||||||    
T  29964548 tctggtgccattttcggtgggctaagtacatacagagcttgccctggctttaaacggg-cccccgcaagtgggcggtgggattgatcccatcgaattagt 29964450  T
Q  230 cgattcttg 238  Q
    |||||||||    
T  29964449 cgattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 33698794 - 33698706
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||||||  ||||||||||||| ||||||||| |||||||||    
T  33698794 ttgctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagtttt 33698706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 53848501 - 53848434
Alignment:
Q  189 cccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 11390661 - 11390799
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||| ||||||||| |||||| |||||||||||| |||||||| ||||||||| ||||||| ||| || |||||||||    |||  |||  |||    
T  11390661 ggtttgatttcctctggtgtcaattttggtgggctaagtccatacagagcttgctctgtctttaaatgggtcctccgcaaatgattcgtgagattattcc 11390760  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  11390761 cctcggattagtcgattcttggatcggatactgagtttt 11390799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 55371380 - 55371302
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggatac 248  Q
    |||||||||| ||||||||||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  55371380 gctctggcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 51532865 - 51532986
Alignment:
Q  136 tgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgatt 234  Q
    ||||||||||||||||||||||| ||||||| ||||||||  ||||||| ||| ||||||||| ||| |||||| |||||||||||| ||||||||| ||    
T  51532865 tgccaatttcggtgggctaagtccatacagagcttgctctaactttaaatgggacccccgcaagtggacggtgggattggtcccctcagattagtcggtt 51532964  T
Q  235 cttggatcggataccgagtttt 256  Q
    ||||   || ||||||||||||    
T  51532965 cttgatccgaataccgagtttt 51532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 7470347 - 7470244
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||| ||||| |||| |||||||||||| |    
T  7470347 attccctctaatgccaatttcggtgggctaagttcatacagagcttgctctggctttaaacgggg-ccctgcaagtgggcagtgggattggtcccctcag 7470249  T
Q  224 attag 228  Q
    |||||    
T  7470248 attag 7470244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 17579274 - 17579135
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggccc-ccgcaaatgggcggtggaattggtc 216  Q
    ||||| ||| ||||| |||  ||||| ||||||||||||| ||||||| |||||| | |||||||||||| ||| |||||| |||||||||  |||||||    
T  17579274 ggtttgatttcctctagtgttaattttggtgggctaagtccatacagagcttgctttagctttaaacgggaccctccgcaagtgggcggtgagattggtc 17579175  T
Q  217 ccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| |||||||||||| |||||||| ||| ||||||||    
T  17579174 ccctcagattagtcgatttttggatcgaatatcgagtttt 17579135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 26158877 - 26159003
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| ||||||| ||||||||||||||||||| |||||| ||||||      |||||||||  ||||| |||||||||| |||||||||| |||| |||    
T  26158877 ggtttcattccctttggtgccaatttcggtggg-taagtccatacag------ctctggcttagaacggagcccccgcaagtgggcggtgggattgatcc 26158969  T
Q  218 cctcggattagtcgattcttggatcggataccga 251  Q
    |||||||||||||| | |||||||||||||||||    
T  26158970 cctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 19857116 - 19857239
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||| ||||| ||||||||||||||||||| ||   ||| ||||||||  ||||||| |||| | |||||| ||||||||||||||||||||||||     
T  19857116 attccctttggtgtcaatttcggtgggctaagttcagttagagcttgctctaactttaaatggggtctccgcaagtgggcggtggaattggtcccctcgc 19857215  T
Q  224 attagtcgattcttggatcggata 247  Q
    | ||||||||||||| || |||||    
T  19857216 aatagtcgattcttgaattggata 19857239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 48972843 - 48972714
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagt-catacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||| |||| ||||| |||| |||  |||||||| ||||||||||  ||||   || |||| |||| |||||||||  |||     
T  48972843 attccctctggtgccaatttcgatgggttaagttcatatagagtttgctctgactttaaacggatcccc---aagtggggggtgaaattggtccattcga 48972747  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  48972746 attagtcgattcttgaatcggataccgagtttt 48972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 50731308 - 50731237
Alignment:
Q  185 ggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| | ||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  50731308 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 50781546 - 50781617
Alignment:
Q  185 ggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| | ||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  50781546 ggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 3747732 - 3747778
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3747732 attggtcccctcggattagtcgattcttggatcggataccgagtttt 3747778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 4048085 - 4048147
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  4048085 gcaagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 21776514 - 21776611
Alignment:
Q  158 catacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||||||||||| |||||||||||||| |||  |||| | ||||| |||||||||||||||||  |||||||||||| ||||||  |||||||||||||    
T  21776514 catacagaactttgctctggctttaaatgggctccccactaatggacggtggaattggtcccc-gggattagtcgatccttggaatggataccgagttt 21776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 49167121 - 49167249
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaac---ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccct 220  Q
    |||| |||||||| |||||||||||| ||||||| ||||| | |   |||||||||||||||||||| ||||||||| |||| |||||  ||||| ||||    
T  49167121 attctctctggtgtcaatttcggtggactaagtccatacatagcgttttgctctggctttaaacgggacccccgcaagtgggtggtggggttggttccct 49167220  T
Q  221 cggattagtcgattcttggatcggatacc 249  Q
     | |||||||| ||| |||||| ||||||    
T  49167221 tgaattagtcggttcatggatcagatacc 49167249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 6041794 - 6041670
Alignment:
Q  135 gtgccaatttcggtgggctaagtc-atacagaact-tgctctggctttaaacggggcccccg-caaatgggcggtggaattggtcccctcggattagtcg 231  Q
    ||||||||||||||||  |||||| |||||||  | ||||||| |||||||||  ||||||  |||||||||||||  |||| ||||||  |||||||||    
T  6041794 gtgccaatttcggtggattaagtccatacagagttatgctctgactttaaacgaagcccccctcaaatgggcggtgagattgttccccttagattagtcg 6041695  T
Q  232 attcttggatcggataccgagtttt 256  Q
     |||||||||| |||||||||||||    
T  6041694 gttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 4252463 - 4252404
Alignment:
Q  189 cccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggatac 248  Q
    ||||| ||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  4252463 cccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 7195918 - 7196004
Alignment:
Q  170 gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||||||| ||| ||||| ||  ||||| |||| |||||||||||| ||||||||||||||| |||  |||||||||||||    
T  7195918 gctctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagtttt 7196004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 25017620 - 25017685
Alignment:
Q  190 ccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| |||||||||| |||||| || | |||||||||||||||||||||| ||||||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttcctt-ggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 14343408 - 14343304
Alignment:
Q  137 gccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattc 235  Q
    |||||||||  ||||||||||| ||||||||||||||||| ||||||||||   |||  ||| || ||||| |||||| ||||||  |||||||||||||    
T  14343408 gccaatttcaatgggctaagtccatacagaacttgctctgcctttaaacggtatccca-caagtgagcggtagaattgatccccttagattagtcgattc 14343310  T
Q  236 ttggat 241  Q
    ||||||    
T  14343309 ttggat 14343304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 32094841 - 32094757
Alignment:
Q  172 tctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||| ||||| |||| ||  ||| ||||| |||||||| |||  |||||||| ||||||||||||||||||||||||    
T  32094841 tctgcctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttggatcggataccgagtttt 32094757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 6127562 - 6127648
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    ||||||||| ||||||| ||  |||||||||||| |||||| ||||||||||||  |||||||| | |||| ||||||||| ||||||    
T  6127562 ttgctctggttttaaacaggctccccgcaaatggacggtgggattggtcccctcaaattagtcg-tccttgtatcggatactgagttt 6127648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 14997755 - 14997807
Alignment:
Q  204 ggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| ||||||||||||| |||| |||||||||| ||| |||||||||||||    
T  14997755 ggtgggattggtcccctcgaattaatcgattcttgtatcagataccgagtttt 14997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 34844455 - 34844549
Alignment:
Q  137 gccaatttcggtgggctaagtcatacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcg 231  Q
    |||||||||||||| |||   |||||||| ||| ||| |||||||||| ||| ||||||||| |||  ||||| ||||| ||||||||||||||||    
T  34844455 gccaatttcggtggactagtacatacagagctttgctatggctttaaatggg-cccccgcaagtggatggtgggattggacccctcggattagtcg 34844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 26108441 - 26108475
Alignment:
Q  222 ggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||| |||||||||||||||||    
T  26108441 ggattagtcgattcttgaatcggataccgagtttt 26108475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 32414651 - 32414581
Alignment:
Q  181 aaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccga 251  Q
    |||| |||| |||||||||| ||||||  |||| ||||||   |||||||||||||| |||||||||||||    
T  32414651 aaacagggctcccgcaaatgagcggtgagattgatccccttaaattagtcgattcttagatcggataccga 32414581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 39890652 - 39890606
Alignment:
Q  210 attggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  39890652 attggtccaatcggactagtcgattcttggatcggataccgaatttt 39890606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 51390190 - 51390133
Alignment:
Q  199 tgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||  |||||||||||||||||||||| || || || |||||||||| ||||    
T  51390190 tgggcggtgagattggtcccctcggattagtcggttgttagaccggataccgattttt 51390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 55287929 - 55287982
Alignment:
Q  203 cggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||| ||| ||||||| | ||||||||||| |||||||||||||||| ||||    
T  55287929 cggtgggattagtccccttgaattagtcgattattggatcggataccgaatttt 55287982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 33793579 - 33793623
Alignment:
Q  186 gggcccccgcaaatgggcggtggaattggtcccctcggattagtc 230  Q
    |||| ||||||| ||| |||||| |||||||||||||||||||||    
T  33793579 gggctcccgcaagtggacggtgggattggtcccctcggattagtc 33793623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 39157 - 39289
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  39157 attccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 39256  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||| |||||||||||||    
T  39257 attagtcgattcttggatcagataccgagtttt 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 40390 - 40521
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  40390 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcgg 40488  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||||||||||    
T  40489 attagtcgattcttggatcggataccgagtttt 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 7441 - 7309
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  7441 attccctccggtgccaatttcggtgggctaagtccatacagagctttctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgg 7342  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||||||||||| ||||||    
T  7341 attagtcgattcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 161874 - 162006
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||| |||||||||| ||||||||||||||    
T  161874 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttttaatggggcccccgcaagtgggcggtgggattggtcccctcgg 161973  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||||||| |||||||||||||    
T  161974 attagtcgattcttggatcagataccgagtttt 162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 1188 - 1057
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||||     
T  1188 attccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcga 1089  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  1088 attagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 9431 - 9300
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||||     
T  9431 attccctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcga 9332  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| ||||||||||||||||||    
T  9331 attagtcgattctt-gatcggataccgagtttt 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 12128 - 12001
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||| ||| ||| |||||| ||||||||||||| ||||    
T  12128 cctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgggg-ccccacaagtggacggtgggattggtcccctcgaatta 12030  T
Q  228 gtcgattcttggatc-ggataccgagtttt 256  Q
    ||| |||||| |||| ||||||||||||||    
T  12029 gtcaattctt-gatcgggataccgagtttt 12001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 53003 - 52871
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||  |||||||| | |||||||| |||||    
T  53003 attccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcgg 52904  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||||||||| |||||||||||||||||    
T  52903 attagtcgattcttgaatcggataccgagtttt 52871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 97498 - 97366
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||| |||||||||| |||||||| ||||     
T  97498 attccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctcgt 97399  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||| || ||||| |||||||||||||||    
T  97398 attagtcggtttttggaccggataccgagtttt 97366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 2514 - 2478
Alignment:
Q  219 ctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||||||||||||||||||| |||||||| |||||||    
T  2514 ctcggattagtcgattcttgaatcggatatcgagttt 2478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 129 - 256
Target Start/End: Original strand, 32357 - 32484
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||| |||| ||||| ||||||||||||||||||    
T  32357 cctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggattggtcccctcggatta 32456  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    |||||||||| ||||||||||||||||||    
T  32457 gtcgattctt-gatcggataccgagtttt 32484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 66827 - 66951
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtcatacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgga 224  Q
    ||||| |||||||||||||| |||||||||||||        ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  66827 attccttctggtgccaattttggtgggctaagtcg-------cttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgga 66919  T
Q  225 ttagtcgattcttggatcggataccgagtttt 256  Q
    ||||||| | ||||||||||||||||||||||    
T  66920 ttagtcggtccttggatcggataccgagtttt 66951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 2535 - 2426
Alignment:
Q  148 tgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggat 246  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  | |||| |||||||    
T  2535 tgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggat 2436  T
Q  247 accgagtttt 256  Q
    ||||||||||    
T  2435 accgagtttt 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 41776 - 41645
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcgg 223  Q
    ||||||||| || ||||||||| || |||||||| ||||||| |||||||||||||||||||||||||| |||| |||||  ||| ||||||||||||||    
T  41776 attccctcttgttccaatttcgttgtgctaagtccatacagagcttgctctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcgg 41677  T
Q  224 attagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||| |||||||||| |||||||    
T  41676 attagtcgattctt-gatcggatacagagtttt 41645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 20281 - 20418
Alignment:
Q  119 ggtttaattccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcc 217  Q
    ||||| |||||||||||||||||||||  ||||||||||| ||||| | ||||||||||||||||||||| ||||||||| ||||||||  ||||| | |    
T  20281 ggtttgattccctctggtgccaatttcaatgggctaagtccatacatagcttgctctggctttaaacgggacccccgcaagtgggcggtaaaattgat-c 20379  T
Q  218 cctcggattagtcgattcttggatcggataccgagtttt 256  Q
     |||||||||||| ||||||||| |||||||||||||||    
T  20380 tctcggattagtcaattcttggaccggataccgagtttt 20418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 10821 - 10695
Alignment:
Q  129 cctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggatta 227  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||| ||| ||| |||||| ||||||||||||| ||||    
T  10821 cctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgggg-ccccacaagtggacggtgggattggtcccctcgaatta 10723  T
Q  228 gtcgattcttggatcggataccgagtttt 256  Q
    ||| |||||| ||||||||||||||||||    
T  10722 gtcaattctt-gatcggataccgagtttt 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 8513 - 8451
Alignment:
Q  194 gcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| |||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  8513 gcaagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 256
Target Start/End: Complemental strand, 29274 - 29143
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaactt-gctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcg 222  Q
    |||||| ||| ||||| ||||||| || |||||| ||||||| ||| |||||||||| ||| ||  ||||||||||||| | |||| ||||||||||||     
T  29274 attcccgctgatgccattttcggtcgg-taagtccatacagagctttgctctggcttaaaatgga-cccccgcaaatggacagtgggattggtcccctca 29177  T
Q  223 gattagtcgattcttggatcggataccgagtttt 256  Q
    ||||||||  | ||||||||||||||||||||||    
T  29176 gattagtcagtccttggatcggataccgagtttt 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 90 - 1
Alignment:
Q  125 attccctctggtgccaatttcggtgggctaagtc-atacagaacttgctctggctttaaacggggcccccgcaaatgggcggtggaattg 213  Q
    |||||||||  || |||||||| ||||||||||| |||||||  ||||||| |||||||||||||||||| ||  |||||||||| ||||    
T  90 attccctcttatgtcaatttcgatgggctaagtccatacagagtttgctctagctttaaacggggcccccacatgtgggcggtgggattg 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 27903 - 27966
Alignment:
Q  192 ccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagttt 255  Q
    |||||| |||| ||||  ||| |||||||||||||||||| |||||||||| ||||||||||||    
T  27903 ccgcaagtgggtggtgagatttgtcccctcggattagtcggttcttggatcagataccgagttt 27966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 26655 - 26609
Alignment:
Q  203 cggtggaattggtcccctcggattagtcgattcttggatcggatacc 249  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  26655 cggtggaattggtcccctcgaattagtcgatttttggatcgaatacc 26609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 123117 - 123066
Alignment:
Q  204 ggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||| ||||||    
T  123117 ggtgggattggtcccctcggattaatcga-tcttggatcggataccaagtttt 123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 11508 - 11420
Alignment:
Q  168 ttgctctggctttaaacggggcccccgcaaatgggcggtggaattggtcccctcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||| ||||||||||| |||| |||||||| |||  | ||| |||| |||||||  |||||| | | ||||||||||||||| ||||||    
T  11508 ttgccctggctttaaatggggtccccgcaagtggaagatgggattgatcccctcaaattagttggtccttggatcggataccaagtttt 11420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 265880 - 265915
Alignment:
Q  220 tcggattagtcgattcttggatcggataccgagtttt 256  Q
    |||||||||||||||||| ||||||||||||||||||    
T  265880 tcggattagtcgattctt-gatcggataccgagtttt 265915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University