View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12039_low_27 (Length: 328)

Name: NF12039_low_27
Description: NF12039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12039_low_27
NF12039_low_27
[»] chr8 (47 HSPs)
chr8 (18-311)||(8653730-8654025)
chr8 (229-312)||(1826087-1826174)
chr8 (229-312)||(1860532-1860619)
chr8 (225-312)||(30650189-30650280)
chr8 (229-312)||(37393480-37393567)
chr8 (225-269)||(5416811-5416855)
chr8 (225-318)||(30872782-30872879)
chr8 (224-312)||(3869245-3869337)
chr8 (228-312)||(5417109-5417197)
chr8 (228-312)||(37393773-37393861)
chr8 (223-298)||(24456731-24456810)
chr8 (225-312)||(24456948-24457039)
chr8 (232-311)||(35486160-35486243)
chr8 (229-312)||(39240315-39240402)
chr8 (221-312)||(39912215-39912310)
chr8 (226-312)||(18914547-18914637)
chr8 (238-312)||(40094487-40094565)
chr8 (231-312)||(14920707-14920792)
chr8 (223-312)||(31230610-31230703)
chr8 (226-318)||(31230903-31230999)
chr8 (229-312)||(9495319-9495406)
chr8 (225-312)||(11198501-11198592)
chr8 (229-312)||(18018082-18018169)
chr8 (225-312)||(29027264-29027355)
chr8 (226-272)||(40032426-40032472)
chr8 (226-272)||(40040162-40040208)
chr8 (225-312)||(44678316-44678407)
chr8 (226-312)||(119412-119502)
chr8 (224-298)||(758342-758420)
chr8 (229-307)||(6843498-6843580)
chr8 (226-312)||(18622043-18622133)
chr8 (225-311)||(28207050-28207140)
chr8 (225-318)||(35223773-35223870)
chr8 (225-318)||(35224057-35224154)
chr8 (227-312)||(39240031-39240120)
chr8 (228-308)||(30568576-30568660)
chr8 (228-312)||(44254867-44254955)
chr8 (225-312)||(11639051-11639142)
chr8 (223-269)||(11639378-11639424)
chr8 (225-312)||(18017789-18017880)
chr8 (225-312)||(21512412-21512502)
chr8 (229-312)||(26736128-26736215)
chr8 (222-267)||(119113-119158)
chr8 (224-298)||(33542382-33542460)
chr8 (223-259)||(1825807-1825843)
chr8 (223-259)||(1860252-1860288)
chr8 (225-269)||(12873389-12873433)
[»] chr3 (58 HSPs)
chr3 (222-312)||(26332315-26332409)
chr3 (223-312)||(54081580-54081673)
chr3 (225-312)||(34521265-34521356)
chr3 (229-311)||(14353049-14353135)
chr3 (224-318)||(40410710-40410808)
chr3 (222-312)||(41997815-41997909)
chr3 (225-309)||(41208699-41208787)
chr3 (224-311)||(54108417-54108508)
chr3 (224-318)||(28688280-28688378)
chr3 (223-272)||(44069463-44069512)
chr3 (222-308)||(45871693-45871783)
chr3 (229-312)||(54081287-54081373)
chr3 (225-312)||(12123089-12123180)
chr3 (237-312)||(12123375-12123454)
chr3 (229-312)||(21169669-21169756)
chr3 (224-311)||(28691112-28691203)
chr3 (229-312)||(41208404-41208491)
chr3 (225-312)||(45171067-45171158)
chr3 (223-272)||(7274650-7274699)
chr3 (221-270)||(14353389-14353438)
chr3 (225-311)||(31514159-31514249)
chr3 (226-312)||(44069123-44069213)
chr3 (225-311)||(46766911-46767001)
chr3 (222-312)||(53310018-53310112)
chr3 (226-312)||(54107669-54107759)
chr3 (225-298)||(4846906-4846983)
chr3 (223-312)||(10756715-10756808)
chr3 (225-318)||(15862465-15862562)
chr3 (229-298)||(28691423-28691496)
chr3 (226-318)||(15862182-15862278)
chr3 (224-312)||(35580245-35580337)
chr3 (225-268)||(41998158-41998201)
chr3 (226-272)||(8846416-8846462)
chr3 (225-311)||(26332620-26332709)
chr3 (223-312)||(17102381-17102474)
chr3 (272-312)||(29248369-29248409)
chr3 (229-298)||(34521567-34521640)
chr3 (223-312)||(52606126-52606218)
chr3 (238-298)||(7743075-7743139)
chr3 (229-272)||(17274116-17274159)
chr3 (226-298)||(33812853-33812929)
chr3 (228-312)||(40926307-40926394)
chr3 (230-273)||(49222040-49222083)
chr3 (229-267)||(2829410-2829448)
chr3 (226-272)||(31513863-31513909)
chr3 (225-312)||(43899370-43899461)
chr3 (237-308)||(45871989-45872064)
chr3 (230-312)||(7274938-7275024)
chr3 (226-267)||(8846076-8846117)
chr3 (254-312)||(27254012-27254074)
chr3 (226-312)||(27940272-27940362)
chr3 (231-272)||(35753408-35753449)
chr3 (227-272)||(45171407-45171452)
chr3 (226-308)||(52609662-52609748)
chr3 (238-312)||(53678445-53678523)
chr3 (222-311)||(2078769-2078862)
chr3 (226-311)||(40969255-40969344)
chr3 (226-311)||(51883859-51883948)
[»] chr2 (56 HSPs)
chr2 (222-312)||(20908507-20908601)
chr2 (226-312)||(4104455-4104545)
chr2 (225-312)||(25642564-25642655)
chr2 (229-312)||(27132514-27132601)
chr2 (229-312)||(43183879-43183966)
chr2 (222-307)||(16261171-16261260)
chr2 (224-312)||(16736099-16736191)
chr2 (225-312)||(13354473-13354564)
chr2 (229-311)||(18565300-18565386)
chr2 (220-310)||(36211697-36211791)
chr2 (229-311)||(39912630-39912716)
chr2 (219-312)||(17856192-17856289)
chr2 (223-312)||(28631570-28631663)
chr2 (224-312)||(13354175-13354267)
chr2 (224-312)||(40694193-40694285)
chr2 (224-312)||(41377353-41377444)
chr2 (226-318)||(41377644-41377740)
chr2 (226-272)||(20908851-20908897)
chr2 (222-272)||(31450662-31450712)
chr2 (229-312)||(34820575-34820662)
chr2 (226-312)||(4104159-4104249)
chr2 (229-315)||(38275480-38275570)
chr2 (224-312)||(5961667-5961759)
chr2 (224-312)||(28203156-28203248)
chr2 (227-310)||(12303786-12303873)
chr2 (229-312)||(16655902-16655989)
chr2 (225-312)||(17856485-17856576)
chr2 (225-312)||(18565065-18565156)
chr2 (225-312)||(27476663-27476754)
chr2 (237-312)||(28631285-28631364)
chr2 (220-272)||(4120758-4120810)
chr2 (237-312)||(21470591-21470669)
chr2 (226-318)||(32933881-32933977)
chr2 (228-312)||(34127860-34127948)
chr2 (228-312)||(37744451-37744539)
chr2 (225-272)||(39150165-39150212)
chr2 (229-312)||(4121059-4121146)
chr2 (222-272)||(12304125-12304175)
chr2 (225-312)||(14877482-14877573)
chr2 (230-268)||(16655610-16655648)
chr2 (229-308)||(27476369-27476452)
chr2 (226-272)||(28202860-28202906)
chr2 (227-298)||(36442444-36442519)
chr2 (225-312)||(39454450-39454541)
chr2 (225-311)||(39912924-39913015)
chr2 (227-272)||(16260872-16260917)
chr2 (224-298)||(27246293-27246371)
chr2 (230-312)||(34127570-34127656)
chr2 (226-312)||(41659745-41659835)
chr2 (225-311)||(45389130-45389220)
chr2 (225-318)||(5921676-5921773)
chr2 (222-311)||(15137101-15137194)
chr2 (240-272)||(34484386-34484418)
chr2 (225-269)||(36442132-36442176)
chr2 (228-272)||(37412595-37412639)
chr2 (229-284)||(44610865-44610923)
[»] scaffold0188 (1 HSPs)
scaffold0188 (229-318)||(13831-13924)
[»] chr4 (49 HSPs)
chr4 (226-311)||(34958832-34958920)
chr4 (225-312)||(38866397-38866488)
chr4 (225-312)||(52914951-52915042)
chr4 (226-312)||(40067644-40067734)
chr4 (229-312)||(32385108-32385194)
chr4 (224-312)||(21217845-21217937)
chr4 (222-298)||(45911884-45911964)
chr4 (216-318)||(9010495-9010601)
chr4 (230-311)||(33882246-33882331)
chr4 (226-307)||(46535523-46535608)
chr4 (224-312)||(9010801-9010893)
chr4 (228-312)||(29864471-29864559)
chr4 (223-311)||(44169976-44170068)
chr4 (222-298)||(54136087-54136167)
chr4 (226-272)||(32384653-32384699)
chr4 (225-312)||(43317175-43317266)
chr4 (226-312)||(21218143-21218233)
chr4 (225-311)||(43316879-43316968)
chr4 (222-312)||(46200480-46200574)
chr4 (226-311)||(18862738-18862827)
chr4 (229-298)||(29970196-29970269)
chr4 (223-312)||(37515749-37515842)
chr4 (222-318)||(44432914-44433014)
chr4 (237-312)||(25218095-25218174)
chr4 (224-311)||(29864174-29864265)
chr4 (226-272)||(44710403-44710449)
chr4 (229-312)||(45911582-45911669)
chr4 (223-298)||(48209945-48210024)
chr4 (229-311)||(1157503-1157589)
chr4 (226-312)||(1205673-1205763)
chr4 (224-318)||(12381344-12381442)
chr4 (226-312)||(33626160-33626250)
chr4 (223-272)||(40067345-40067394)
chr4 (226-312)||(46200781-46200871)
chr4 (215-312)||(4793895-4793995)
chr4 (230-311)||(33625868-33625953)
chr4 (228-272)||(43969556-43969600)
chr4 (227-312)||(54191880-54191969)
chr4 (226-298)||(9657667-9657743)
chr4 (223-311)||(22831095-22831187)
chr4 (222-269)||(46621270-46621317)
chr4 (229-308)||(1157206-1157289)
chr4 (226-272)||(10014465-10014511)
chr4 (226-272)||(10021606-10021652)
chr4 (229-312)||(25058836-25058923)
chr4 (229-311)||(1205381-1205467)
chr4 (226-267)||(10017815-10017856)
chr4 (226-312)||(27347597-27347687)
chr4 (222-267)||(46535867-46535912)
[»] chr5 (46 HSPs)
chr5 (224-312)||(38416430-38416522)
chr5 (226-318)||(42710640-42710736)
chr5 (224-272)||(3878479-3878527)
chr5 (224-312)||(5087805-5087897)
chr5 (228-312)||(36751904-36751992)
chr5 (225-312)||(7399076-7399167)
chr5 (224-298)||(10656092-10656170)
chr5 (220-312)||(7399374-7399471)
chr5 (220-299)||(5460182-5460265)
chr5 (229-312)||(5624382-5624469)
chr5 (229-312)||(15476269-15476356)
chr5 (233-312)||(26289027-26289110)
chr5 (225-318)||(36752192-36752288)
chr5 (226-312)||(9692919-9693008)
chr5 (226-312)||(10656390-10656480)
chr5 (223-272)||(29023934-29023983)
chr5 (226-312)||(31908928-31909020)
chr5 (225-318)||(35263493-35263590)
chr5 (223-267)||(35263839-35263883)
chr5 (225-272)||(5088468-5088515)
chr5 (225-268)||(17861375-17861417)
chr5 (224-312)||(31909226-31909318)
chr5 (225-312)||(12593455-12593546)
chr5 (225-312)||(12694982-12695073)
chr5 (223-269)||(15670494-15670540)
chr5 (225-312)||(21750809-21750900)
chr5 (225-312)||(38416142-38416233)
chr5 (226-312)||(334296-334386)
chr5 (227-272)||(8418524-8418569)
chr5 (239-312)||(15476555-15476632)
chr5 (229-272)||(5460286-5460329)
chr5 (225-268)||(19204943-19204986)
chr5 (226-298)||(28392080-28392156)
chr5 (225-312)||(16353450-16353541)
chr5 (225-312)||(18514287-18514378)
chr5 (225-267)||(26288990-26289032)
chr5 (225-312)||(40589350-40589441)
chr5 (225-312)||(40589953-40590044)
chr5 (223-298)||(40774647-40774726)
chr5 (223-298)||(43570081-43570160)
chr5 (222-267)||(3879357-3879402)
chr5 (223-272)||(19205283-19205332)
chr5 (229-269)||(25923121-25923161)
chr5 (225-269)||(33699274-33699318)
chr5 (225-272)||(33762900-33762948)
chr5 (220-272)||(33763248-33763299)
[»] chr6 (30 HSPs)
chr6 (224-311)||(25551345-25551436)
chr6 (224-312)||(31029522-31029614)
chr6 (227-310)||(11524706-11524793)
chr6 (226-311)||(12903221-12903310)
chr6 (225-312)||(3338476-3338567)
chr6 (226-272)||(9173901-9173947)
chr6 (221-312)||(33329201-33329296)
chr6 (222-312)||(25551632-25551726)
chr6 (223-307)||(24604872-24604960)
chr6 (221-272)||(35132930-35132981)
chr6 (225-312)||(3338771-3338862)
chr6 (226-312)||(3289206-3289296)
chr6 (239-309)||(11524778-11524852)
chr6 (223-272)||(33548197-33548246)
chr6 (223-312)||(13155836-13155929)
chr6 (223-312)||(13160692-13160785)
chr6 (224-272)||(35132599-35132647)
chr6 (225-272)||(3288929-3288976)
chr6 (224-316)||(11525057-11525153)
chr6 (226-318)||(14336902-14336998)
chr6 (221-272)||(29009949-29010000)
chr6 (229-312)||(6220059-6220146)
chr6 (223-269)||(17245667-17245713)
chr6 (225-312)||(33545118-33545209)
chr6 (226-312)||(1860782-1860871)
chr6 (226-312)||(32283026-32283116)
chr6 (222-312)||(33544818-33544912)
chr6 (237-318)||(1158599-1158684)
chr6 (225-269)||(19135789-19135833)
chr6 (223-267)||(33971925-33971969)
[»] chr7 (33 HSPs)
chr7 (225-315)||(9034608-9034702)
chr7 (223-298)||(31715931-31716010)
chr7 (225-318)||(35085738-35085835)
chr7 (223-311)||(47251193-47251285)
chr7 (226-317)||(23472847-23472942)
chr7 (225-312)||(32706731-32706822)
chr7 (229-312)||(43726247-43726333)
chr7 (225-311)||(31715632-31715722)
chr7 (224-318)||(35086030-35086128)
chr7 (229-311)||(44448209-44448295)
chr7 (228-309)||(8769581-8769666)
chr7 (226-311)||(18731019-18731108)
chr7 (225-269)||(23472592-23472636)
chr7 (223-312)||(47250842-47250935)
chr7 (226-311)||(47305127-47305216)
chr7 (228-312)||(2357351-2357439)
chr7 (226-298)||(11679012-11679088)
chr7 (224-312)||(21522513-21522604)
chr7 (225-272)||(32707071-32707118)
chr7 (227-311)||(48704105-48704193)
chr7 (229-312)||(39118013-39118100)
chr7 (226-308)||(44486232-44486318)
chr7 (224-268)||(10625428-10625472)
chr7 (232-272)||(21522226-21522266)
chr7 (223-311)||(473189-473281)
chr7 (228-312)||(34568585-34568673)
chr7 (222-298)||(43140694-43140774)
chr7 (225-308)||(5238450-5238537)
chr7 (225-312)||(9230973-9231064)
chr7 (222-312)||(11678699-11678793)
chr7 (224-298)||(22338586-22338664)
chr7 (225-269)||(10625105-10625149)
chr7 (225-298)||(23437151-23437228)
[»] scaffold0051 (2 HSPs)
scaffold0051 (225-297)||(40351-40427)
scaffold0051 (226-312)||(40648-40738)
[»] chr1 (62 HSPs)
chr1 (225-312)||(10654029-10654119)
chr1 (225-312)||(16267986-16268076)
chr1 (229-312)||(29256835-29256922)
chr1 (225-308)||(36077270-36077357)
chr1 (224-318)||(52412596-52412694)
chr1 (227-308)||(11797147-11797232)
chr1 (227-312)||(16267716-16267805)
chr1 (223-312)||(18793688-18793781)
chr1 (225-312)||(9881551-9881642)
chr1 (225-312)||(23281306-23281397)
chr1 (221-312)||(32563954-32564049)
chr1 (225-312)||(33753224-33753315)
chr1 (225-312)||(34028720-34028811)
chr1 (225-312)||(36657797-36657888)
chr1 (217-312)||(52412894-52412993)
chr1 (229-311)||(10923365-10923451)
chr1 (222-267)||(14775741-14775786)
chr1 (222-312)||(33753512-33753605)
chr1 (222-312)||(34279537-34279631)
chr1 (222-312)||(37198928-37199022)
chr1 (222-312)||(50921387-50921481)
chr1 (226-311)||(13944808-13944897)
chr1 (225-318)||(34029011-34029108)
chr1 (225-310)||(45305707-45305796)
chr1 (223-312)||(50574813-50574906)
chr1 (224-312)||(10923659-10923751)
chr1 (228-312)||(11787742-11787830)
chr1 (225-272)||(25088015-25088062)
chr1 (221-268)||(46739068-46739114)
chr1 (229-272)||(50118350-50118393)
chr1 (225-312)||(6181912-6182003)
chr1 (228-312)||(31125938-31126019)
chr1 (225-312)||(32564245-32564336)
chr1 (226-272)||(51691874-51691920)
chr1 (226-312)||(22584648-22584738)
chr1 (226-312)||(24590521-24590611)
chr1 (226-312)||(34279240-34279330)
chr1 (254-312)||(49291021-49291083)
chr1 (228-272)||(5117995-5118039)
chr1 (223-312)||(5463414-5463507)
chr1 (222-311)||(11788037-11788130)
chr1 (225-298)||(28112720-28112797)
chr1 (224-272)||(28970417-28970465)
chr1 (223-312)||(35986229-35986322)
chr1 (222-315)||(36884718-36884815)
chr1 (237-272)||(2125542-2125577)
chr1 (225-268)||(14118529-14118572)
chr1 (229-268)||(19886258-19886297)
chr1 (229-272)||(30293352-30293395)
chr1 (225-272)||(30792439-30792486)
chr1 (237-312)||(10654325-10654404)
chr1 (225-312)||(21385232-21385323)
chr1 (229-312)||(30611223-30611310)
chr1 (227-269)||(42607845-42607887)
chr1 (225-311)||(4550897-4550987)
chr1 (225-312)||(18793987-18794080)
chr1 (227-272)||(30611561-30611606)
chr1 (227-268)||(50921061-50921102)
chr1 (235-272)||(51810478-51810515)
chr1 (229-298)||(4045102-4045175)
chr1 (222-311)||(4045396-4045489)
chr1 (229-269)||(25088358-25088398)
[»] scaffold0236 (1 HSPs)
scaffold0236 (222-312)||(11510-11604)
[»] scaffold0809 (1 HSPs)
scaffold0809 (225-312)||(4614-4705)
[»] scaffold0168 (2 HSPs)
scaffold0168 (225-312)||(11487-11578)
scaffold0168 (226-312)||(11783-11873)
[»] scaffold0045 (2 HSPs)
scaffold0045 (228-318)||(66029-66123)
scaffold0045 (228-318)||(73361-73455)
[»] scaffold0128 (1 HSPs)
scaffold0128 (226-318)||(45126-45222)
[»] scaffold0012 (1 HSPs)
scaffold0012 (225-268)||(177409-177452)
[»] scaffold0016 (1 HSPs)
scaffold0016 (226-312)||(90805-90895)
[»] scaffold1436 (1 HSPs)
scaffold1436 (225-318)||(1475-1572)


Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 8653730 - 8654025
Alignment:
Q  18 accacaaaaggtgagattcttgtgttaggtaaaaatggaaggaaccaagtggtgggaaatcatagctggatgtaaattctctctaacatccctaaccaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8653730 accacaaaaggtgagattcttgtgttaggtaaaaatggaaggaaccaagtggtgggaaatcatagctggatgtaaattctctctaacatccctaaccaat 8653829  T
Q  118 ggggtttggatagtgtgatttgagataacgattaaagaagttgaaagtattgagtttaaatcaaagcgaagaataacaaatattaatctaacaaccaatt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||| || |    
T  8653830 ggggtttggatagtgtgatttgagataacgattaaagaagttgaaagt-ttgagtttaaatcaaagcgaagaagaagaaatattaatctaaaaactaa-t 8653927  T
Q  218 tattaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |    ||||||||||||| || |||||||||| || |||||||||    
T  8653928 tattaaaaggctaaattgtatttttggtcccctaactatttaggtagtatcgttttggtcccttaattaaaattcaatttattttggtcccttaactt 8654025  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 1826174 - 1826087
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  1826174 taaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 1826087  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 1860619 - 1860532
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  1860619 taaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 1860532  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 30650189 - 30650280
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||| |||| |||| ||||||||||||||| |||    |||||||||||| ||| ||||||||| |||||||||||||    
T  30650189 aggctaaattgcatttttagtcctctaactatttaggtagtatcactttggtcccttaattaaaatttgatttattttggttccttaacttc 30650280  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 37393480 - 37393567
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| |||||||||||||||| |    ||||||||||||| || |||||||||| || ||||||||||    
T  37393480 taaattgtatttttggtcccttaactatttaggtagtatcgttttggtcccttaattaaaattcaatttattttggtcccttaacttc 37393567  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 5416811 - 5416855
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  5416811 aggctaaattgtatttttggtcccctaactatttaggtagtatcg 5416855  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 30872782 - 30872879
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| |||    ||||||||||||| ||  ||||||||| || |||||||||| |||||    
T  30872782 aggctaaattgcatttttggtcccttaactatttaggtagtattgctttggtcccttaattaaaattcgatttattttggtcccttaacttctctttg 30872879  T

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Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 3869337 - 3869245
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||  |||| |||| || ||||||||||    
T  3869337 aaggctaaattgtatttttggtcccttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttttttttgtcccttaacttc 3869245  T

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Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 5417197 - 5417109
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| || |||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||| ||||||||| |||||||||||||    
T  5417197 ctaaactgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaatttgatttattttggttccttaacttc 5417109  T

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Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 37393861 - 37393773
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  37393861 ctaaattgcatttttggtcccttaactatttaggtagtatcgctttgatcccttaattaaaattcgatttattttggtcccttaacttc 37393773  T

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Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 24456731 - 24456810
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||    
T  24456731 aaaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttatttt 24456810  T

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Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 24457039 - 24456948
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgc----ttcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||     ||||||||||||| ||  ||||||||| || ||||||||||    
T  24457039 aggctaaattgcatttttggtcccttaactatttaggtagtatcgccttggtcccttaattaaaattcgatttattttggtcccttaacttc 24456948  T

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Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 311
Target Start/End: Complemental strand, 35486243 - 35486160
Alignment:
Q  232 attgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||| |||||||||||||||| ||||||  |||||||||||    |||||||||||| ||||||||||||||||  ||||||||    
T  35486243 attgcatttttggtcccctaactatttaattagtatcgctttggtcccttaattaaaatttaatttattttagtatcttaactt 35486160  T

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Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 39240402 - 39240315
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| |||||||||||||||||||| |    || |||||||||| ||||||||||||| ||  |||||||||    
T  39240402 taaattgcatttttggtcccttaattatttaggtagtatcgttttggtctcttaattaaaatttaatttattttggtctcttaacttc 39240315  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 312
Target Start/End: Complemental strand, 39912310 - 39912215
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| ||||||  |||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  39912310 taaaaggttaaattacatttttggtcccttaactatttaggtagtatcactttggtcccttaattaaaatttgatttattttggtcccttaacttc 39912215  T

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Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 18914637 - 18914547
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  18914637 ggctaaattgcatttttggtcccctaactatttaggtagcatcgctcttgtcctttaattaaaattcgatttattttggtcccttaacttc 18914547  T

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Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 40094487 - 40094565
Alignment:
Q  238 tttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| ||||| ||| |||||||||||||||||||    |||||||||||| || |||||||||| |||||||||||||    
T  40094487 ttttttgtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggttccttaacttc 40094565  T

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Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 14920792 - 14920707
Alignment:
Q  231 aattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||||||||| ||| |||||| |||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  14920792 aattgcatttttggtcccttaactatttaagtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 14920707  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 31230610 - 31230703
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |  |||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  31230610 aaaggctaaactacatttttggtcccttaactatttaggtagtatcactttggtcccttaattaaaatttgatttattttggtcccttaacttc 31230703  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 31230999 - 31230903
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||  |||||||||||| ||| |||||||||||||| |||    ||||||||||||| || ||||||||||  | |||||||||| |||||    
T  31230999 ggctaaattacatttttggtcccttaactatttaggtagtattgctttggtcccttaattaaaattcaatttattttgatcccttaacttctctttg 31230903  T

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Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 9495406 - 9495319
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||| |||||| ||||||| ||||    || ||||||||||||| ||||||||| || ||||||||||    
T  9495406 taaattgcatttttggtcccttaactatttaagtagtattgctttggtccgttaattaaagtttgatttattttggtcccttaacttc 9495319  T

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Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 11198592 - 11198501
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||  |||||||||    ||||||||||||| ||| |||||||||  | ||||||||||    
T  11198592 aggctaaattgcatttttggtcccttaactatttagacagtatcgctttggtcccttaattaaaatttgatttattttgatcccttaacttc 11198501  T

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Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 18018169 - 18018082
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||| |||||||| ||||| ||||    |||||||||||| || |||||||||| || ||||||||||    
T  18018169 taaattgcatttttggtcccttaactatttaggaagtattgctttgctcccttaattaaaattcaatttattttggtcccttaacttc 18018082  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 29027355 - 29027264
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| ||||||||||| | ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  29027355 aggctaaattatatttttggtctcttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcccttaacttc 29027264  T

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Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 40032426 - 40032472
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||    
T  40032426 ggctaaattgcatttttggtcacttaattatttaggtagtatcgctt 40032472  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 40040162 - 40040208
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||    
T  40040162 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 40040208  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 44678316 - 44678407
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| |||    |||||||| |||| ||  ||||||||| ||| |||||||||    
T  44678316 aggctaaattgcatttttggtcccttaactatttaggtagtattgctttggtcccttaactaaaattcgatttattttggtttcttaacttc 44678407  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 119502 - 119412
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| ||| ||| |||| ||| ||||||||||||||||||    ||||||||||||| |||  |||||||| || ||||||||||    
T  119502 ggctaaattgcattgttgatcccttaactatttaggtagtatcgctttagtcccttaattaaaatttgctttattttggtcccttaacttc 119412  T

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Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 758342 - 758420
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||| ||||||| |||||||| ||| ||| ||||||||||||||||||    ||||||||||||| || ||||||||||    
T  758342 aaggttaaattgcatttttggccccttaactatttaggtagtatcgctttggtcccttaattaaaattaaatttatttt 758420  T

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Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 307
Target Start/End: Original strand, 6843498 - 6843580
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttcctta 307  Q
    ||||||| |||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||| ||||||||| || |||||    
T  6843498 taaattgcatttttggtcccttaactatttaggtagtatcactatgatcccttaattaaaatttgatttattttggtccctta 6843580  T

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Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 18622133 - 18622043
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| | |||||||| | ||| ||||||| |||||||||||    |||||||||||| || |||||||||| || ||||||||||    
T  18622133 ggctaaattgcacttttggtctcttaactatttagatagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaacttc 18622043  T

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Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 28207140 - 28207050
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||| ||||||| |||| ||||||||| | |||||||||||    |||||||||||| ||| ||||||||| ||  ||||||||    
T  28207140 aggctaaattgcatttttgatcccttaattattttgctagtatcgctttgaccccttaattaaaatttgatttattttggtatcttaactt 28207050  T

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Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 35223773 - 35223870
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| | | ||||||||||||||||||    |||||| | |||| ||  ||||||||| || |||||||||| |||||    
T  35223773 aggctaaattgcatttttggtccctttactatttaggtagtatcgctttggtcccttgactaaaattcgatttattttggtcccttaacttctctttg 35223870  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 35224154 - 35224057
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| ||| ||||||| |||||||| |    |||||||| |||| ||  ||||||||| || |||||||||| |||||    
T  35224154 aggctaaattgcatttttggtcccttaactatttagttagtatcgttttggtcccttaactaaaattcgatttattttggtcccttaacttctctttg 35224057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 39240031 - 39240120
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| |||||||||||| ||| |||||||||||||||  |    ||||||||||||| ||  |||||||||  ||||||||||||    
T  39240031 gctaaattgcatttttggtcccttaactatttaggtagtatcattttggtcccttaattaaaattcgatttattttgattccttaacttc 39240120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 30568660 - 30568576
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    ||||||||||||||||||||| ||| ||||||| |||||||| |    ||||||| ||||| ||| ||||||||| || ||||||    
T  30568660 ctaaattgtatttttggtcccttaactatttagttagtatcgatttggtcccttatttaaaatttgatttattttggtcccttaa 30568576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 44254867 - 44254955
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||| ||||||||  || ||| |||||| ||||||||||||    |||||||||||| ||| ||||||||| || ||||||||||    
T  44254867 ctaaattgcatttttggatccttaactatttaagtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 44254955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 11639051 - 11639142
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||| ||||| ||| |||||||||||  |||||    ||||||||||||| ||  ||||||||| ||  |||||||||    
T  11639051 aggctaaattgtattttttgtcccttaactatttaggtagcgtcgctttggtcccttaattaaaattcgatttattttcgtctcttaacttc 11639142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 11639424 - 11639378
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||||| |||||| ||||| ||| ||||||||||||||||    
T  11639424 aaaggctaaattgcatttttcgtcccttaactatttaggtagtatcg 11639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 18017789 - 18017880
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| |||    || |||||||||| || |||||||||| || | ||||||||    
T  18017789 aggctaaattgcatatttggtcccttaactatttaggtagtattgctttggtcacttaattaaaattcaatttattttggtcctttaacttc 18017880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 21512412 - 21512502
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||| ||||| ||| |||||||| |||||||||    ||| ||||||||| ||| ||||||||| |  ||||||||||    
T  21512412 aggctaaattgtatttttcgtcccttaactatttagg-agtatcgctttagtccattaattaaaatttgatttattttggccccttaacttc 21512502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 26736128 - 26736215
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||    ||||||  ||||| ||||||||||||| || ||||| ||||    
T  26736128 taaattgcatttttggtctcttaactatttaggtagtatcgctttggtcccttttttaaaatttaatttattttggtcccttaccttc 26736215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 119113 - 119158
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    ||||| |||||||| |||||||||||| ||| ||||||||||||||    
T  119113 aaaagcctaaattgcatttttggtcccttaactatttaggtagtat 119158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 33542382 - 33542460
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||||||||||||||  ||| ||||||  ||||||||||    ||||||||||||| | | |||||||||    
T  33542382 aaggctaaattgtatttttggtcctttaactatttaattagtatcgctttggtcccttaattaaaatctgatttatttt 33542460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 1825807 - 1825843
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattattta 259  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  1825807 aaaggctaaattgtatttttggtcccttaactattta 1825843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 1860252 - 1860288
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattattta 259  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  1860252 aaaggctaaattgtatttttggtcccttaactattta 1860288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 12873433 - 12873389
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||    
T  12873433 aggctaaattgtatttttggtcccttaactatttaattagtatcg 12873389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 5e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 26332315 - 26332409
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||    ||||||||||||| || |||||||||| || ||||||||||    
T  26332315 aaaaggctaaattgcatttttggtcccctaactatttaggtagtatcgctttggtcccttaattaaatttcaatttattttggtcccttaacttc 26332409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 54081673 - 54081580
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||    ||||||||||||| ||  ||||||||| |||||||||||||    
T  54081673 aaaggctaaattgtatttttggtcccttaactatttaggtagtattgctttggtcccttaattaaaattcgatttattttggttccttaacttc 54081580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 34521265 - 34521356
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  34521265 aggctaaattgcatttttggtcccttaattatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 34521356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 14353049 - 14353135
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||    ||||||||||||| ||| |||||||||||| |||||||||    
T  14353049 taaattgcatttttgatcccttaattatttaggtagtatcgctttggtcccttaattaaaatttgatttattttagtcccttaactt 14353135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 40410710 - 40410808
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||| ||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || |||||||||| |||||    
T  40410710 aaggttaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttctctttg 40410808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 41997815 - 41997909
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||  |||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||||||||||||| || ||||||||||    
T  41997815 aaaaggctaaattacatttttggtcccttaactatttaggtagtatcgttttggtcccttaattaaaatttaatttattttggtcccttaacttc 41997909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 41208787 - 41208699
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaac 309  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||||||||    ||||||||||||| ||| |||||||||||| |||||||    
T  41208787 aggctaaattgcatttttagtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttagtcccttaac 41208699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 54108508 - 54108417
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||||    ||||||||||||| ||  ||||||||| || |||||||||    
T  54108508 aaggctaaattgcatttttggtcccttaattatttagctagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaactt 54108417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 28688378 - 28688280
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||||  |||||| ||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || |||||||||| |||||    
T  28688378 aaggctaaattacattttttgtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttctctttg 28688280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 44069512 - 44069463
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  44069512 aaaggctaaattgtatttttggtcccttaactatttaggtagtatcgctt 44069463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 308
Target Start/End: Original strand, 45871693 - 45871783
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||    
T  45871693 aaaaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaa 45871783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 54081287 - 54081373
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt---cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||    ||||||||||| ||  |||||||||||| ||||||||||    
T  54081287 taaattgtatttttggtcccttaactatttaggcagtatcgctttggtccttaattaaaattcgatttattttagtcccttaacttc 54081373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 12123089 - 12123180
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||  |    ||||||||||||| ||  ||||||||| |||||||||||||    
T  12123089 aggctaaattgcatttttggtcccttaactatttaggtagtatcattttggtcccttaattaaaattcgatttattttggttccttaacttc 12123180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 12123454 - 12123375
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  12123454 atttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 12123375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 21169669 - 21169756
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||| | ||| |||||||||||||||| |    ||||||||||||| ||| ||||||||| || ||||||||||    
T  21169669 taaattgtatttttggtctcttaactatttaggtagtatcgttttggtcccttaattaaaatttgatttattttggtcccttaacttc 21169756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 28691112 - 28691203
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgc----ttcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| ||    ||||||||| |||| ||  ||||||||| || |||||||||    
T  28691112 aaggctaaattgtatttttggtcccttaattatttaggtggtattgctttgttcccttaactaaaattcgatttattttggtcccttaactt 28691203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 41208404 - 41208491
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||| |||||| |||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  41208404 taaattgcatttttggtcccttaactatttaagtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 41208491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 45171067 - 45171158
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||| ||||||| ||| |||||||||||||| ||||    |||||||||||| ||  ||||||||| || ||||||||||    
T  45171067 aggctaaattgtatttctggtcccttaactatttaggtagtattgctttggccccttaattaaaattcgatttattttggtcccttaacttc 45171158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 7274650 - 7274699
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  7274650 aaaggctaaattgcatttttggtcccttaaatatttaggtagtatcgctt 7274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 14353438 - 14353389
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgc 270  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  14353438 taaaaggataaattgtatttttggtcccttaactatttaggtagtatcgc 14353389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 31514249 - 31514159
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||||||||    ||| ||||||||| || |||||||||| || |||||||||    
T  31514249 aggctaaattgcatttttagtcccttaactatttaggtagtatcgctttggtcctttaattaaaattcaatttattttggtcccttaactt 31514159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 44069123 - 44069213
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| |||||||||||||||| |    |||||||| |||| ||  ||||||||| |||||||||||||    
T  44069123 ggctaaattgcatttttggtcccttaactatttaggtagtatcgttttggtcccttaactaaaattcgatttattttggttccttaacttc 44069213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 46767001 - 46766911
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||||||||||||| ||| ||||| | ||||||||||    ||||||||||||| ||| ||||||||| ||  ||||||||    
T  46767001 aggctaaattgtatttttggtcccttaactattttgctagtatcgctttggtcccttaattaaaatttgatttatttttgtatcttaactt 46766911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 53310112 - 53310018
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||||| |||||| ||| ||||||||||||||||||||| ||    || |||||||||| ||| ||||||||| || ||||||||||    
T  53310112 aaaagactaaattgcatttttagtctcctaattatttaggtagtatcactttggtctcttaattaaaatttgatttattttggtcccttaacttc 53310018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 54107669 - 54107759
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || | ||||||||    
T  54107669 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcctttaacttc 54107759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 4846983 - 4846906
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||    
T  4846983 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttgatcccttaattaaaattcgatttatttt 4846906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 10756715 - 10756808
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||||    |||||||| |||| ||  ||||||||| || ||||||||||    
T  10756715 aaagactaaattgtatttttggtcccttagctatttaggtagtatcgctttggtcccttaactaaaattcgatttattttggtcccttaacttc 10756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 15862562 - 15862465
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||||| ||    |||||| |||||| || |||||||||| || |||||||||| |||||    
T  15862562 aggctaaattgcattttttgtcccttaactatttaggtagtatctcttttgtccctttattaaaattcaatttattttggtcccttaacttctctttg 15862465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 28691496 - 28691423
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    ||||| ||||||| ||| |||||||||    
T  28691496 taaattgtattttttgtcccttaattatttaggtagtatcgcttttgtccctaaattaaaatttgatttatttt 28691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 15862182 - 15862278
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||  ||||| |||||| ||||||||||||||||||||||    ||| ||||||||| ||  ||||||||| || |||||||||| |||||    
T  15862182 ggctaaattccattttaggtcccttaattatttaggtagtatcgctttggtcctttaattaaaattcgatttattttggtcccttaacttctctttg 15862278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 35580337 - 35580245
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| ||||||| |||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||| ||||||||| || | ||||||||    
T  35580337 aaggttaaattgcatttttggtcccttaactatttaggtagtatcgatttggtcccttaattaaaatttgatttattttggtcctttaacttc 35580245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 41998201 - 41998158
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  41998201 aggctaaattgtatttttggtcccttaactatttaggtagtatc 41998158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 8846462 - 8846416
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||    
T  8846462 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 8846416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 26332709 - 26332620
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||| |||||||||||  ||| |||||||||||||||||||    |||||||||||| ||  ||||||||| || |||||||||    
T  26332709 aggctaaattgcatttttggtcct-taactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaactt 26332620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 17102381 - 17102474
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcg----cttcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| |||||||||  | |||||||||||||| ||| |    ||||||||||||||| ||  ||||||||| || ||||||||||    
T  17102381 aaaggctaaattgcatttttggtttcttaattatttaggtaatattgttttcttcccttaattaaaattcgatttattttggtcccttaacttc 17102474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 29248369 - 29248409
Alignment:
Q  272 tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  29248369 tcccttaattaaaatttaatttattttggttccttaacttc 29248409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 34521640 - 34521567
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||    
T  34521640 taaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttatttt 34521567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 52606126 - 52606218
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| ||||| |||||| ||| |||||| ||||||||| ||    |||||||||||| ||| ||||||||| || ||||||||||    
T  52606126 aaaggctaaattgcatttt-ggtcccttaactatttatgtagtatcgttttggtcccttaattaaaatttgatttattttggtcccttaacttc 52606218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 7743139 - 7743075
Alignment:
Q  238 tttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| |||||||||    
T  7743139 tttttggtcccttaactatttaggtagtatcgctttgatcccttaattaaaatttgatttatttt 7743075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 17274159 - 17274116
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  17274159 taaattgtatttttggtcctttaactatttaggtagtatcgctt 17274116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 33812929 - 33812853
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||||  |||||||||| | ||| ||||||||||||||||||    ||||||||||||| ||| |||||||||    
T  33812929 ggctaaatttcatttttggtctcttaaatatttaggtagtatcgctttagtcccttaattaaaatttgatttatttt 33812853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 40926394 - 40926307
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||| |||||| ||||||||| ||||||||||||||| ||    ||| ||||||||| ||| ||||||||| | |||||||||||    
T  40926394 ctaaattgcatttttagtcccctaactatttaggtagtatcactttggtccattaattaaaatttgatttatttt-ggtccttaacttc 40926307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 49222040 - 49222083
Alignment:
Q  230 aaattgtatttttggtcccctaattatttaggtagtatcgcttc 273  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||    
T  49222040 aaattgtatttttggtcccttaactatttaggtagtattgcttc 49222083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 2829410 - 2829448
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  2829410 taaattgtatttttggtcccttaactatttaggtagtat 2829448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 31513863 - 31513909
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||  ||| |||||||||||||||||||    
T  31513863 ggctaaattgcatttttggtccattaactatttaggtagtatcgctt 31513909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 43899461 - 43899370
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||| || ||| |||||||||| |||||||    |||| |||||||| ||  ||||||||| || ||||||||||    
T  43899461 aggctaaattgcatttttggttccttaactatttaggtaatatcgctttggtcccctaattaaaattcgatttattttggtcccttaacttc 43899370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 45872064 - 45871989
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    |||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| |||||||||    
T  45872064 atttttggtcccttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggttccttaa 45871989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 7275024 - 7274938
Alignment:
Q  230 aaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| |||||||||||  ||| ||||||||||||||| ||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  7275024 aaattgcatttttggtccgttaactatttaggtagtatcactttggtcccttaattaaaattcgatttattttggtcccttaacttc 7274938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 8846076 - 8846117
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||||||||| |||||||||||| ||| ||||||||||||||    
T  8846076 ggctaaattgcatttttggtcccttaactatttaggtagtat 8846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 27254012 - 27254074
Alignment:
Q  254 tatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||| ||||||||||    |||||||||||| ||| ||||||||| |||||||||||||    
T  27254012 tatttaggcagtatcgctttggtcccttaattaaaatttgatttattttggttccttaacttc 27254074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 27940272 - 27940362
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||  |||||||||||| ||| ||||||||||||||| ||    |||||||||| || ||| ||||||||| || ||| ||||||    
T  27940272 ggctaaatttcatttttggtcccttaactatttaggtagtatcactttggtcccttaatttaaatttgatttattttggtccctaaacttc 27940362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 35753408 - 35753449
Alignment:
Q  231 aattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||| |||||||||||| ||| |||||||||||||||||||    
T  35753408 aattgcatttttggtcccttaactatttaggtagtatcgctt 35753449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 45171452 - 45171407
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||| |||||| ||||| ||| |||||||||||||||||||    
T  45171452 gctaaattgcatttttagtcccttaactatttaggtagtatcgctt 45171407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 52609748 - 52609662
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    |||||||||  |||||||||||| ||| |||||||||| |||||||    ||||||||||||| ||  ||||||||| || ||||||    
T  52609748 ggctaaattccatttttggtcccttaactatttaggtactatcgctttggtcccttaattaaaattcgatttattttggtcccttaa 52609662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 53678445 - 53678523
Alignment:
Q  238 tttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||||  ||||||||||    ||| ||||||||| ||| ||||||||||||  |||||||||    
T  53678445 tttttggtcccttaattatttaaatagtatcgctttggtcctttaattaaaatttgatttattttagtatcttaacttc 53678523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 2078862 - 2078769
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||| |||||||||||||| ||||| ||| ||||||  || |||||||    ||||||||||||| ||| ||||||||| ||  ||||||||    
T  2078862 aaaaggttaaattgtatttttagtcccttaactatttaattaatatcgctttggtcccttaattaaaatttgatttattttggtatcttaactt 2078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 40969255 - 40969344
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||| |||||| ||||| ||| ||||||  ||||||||||    ||||||||||||| ||| ||||||||| ||  ||||||||    
T  40969255 ggctaaattgcatttttagtcccttaactatttaattagtatcgctttggtcccttaattaaaatttgatttattttggtatcttaactt 40969344  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 51883859 - 51883948
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||| ||||||  |||| ||| ||||||  |||||||||||    |||||||||||| ||||||||||||| ||  ||||||||    
T  51883859 ggctaaattgcatttttaatcccttaactatttaattagtatcgctttggtcccttaattaaaatttaatttattttggtatcttaactt 51883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 20908507 - 20908601
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    || |||| |||| ||  |||||||||||||||||||||||    
T  20908507 aaaaggctaaattgtatttttggtcccttaattatttaggtagtatcgctttggtcctttaactaaaattcgatttattttagttccttaacttc 20908601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 4104545 - 4104455
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| |||||||||||||    
T  4104545 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctttgatcccttaattaaaattcgatttattttggttccttaacttc 4104455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 25642655 - 25642564
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  25642655 aggctaaattgtatttttgttcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 25642564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 27132514 - 27132601
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  27132514 taaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 27132601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 43183966 - 43183879
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  43183966 taaattgcatttttggtcccttaattatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 43183879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 16261260 - 16261171
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttcctta 307  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||| ||||||||| || |||||    
T  16261260 aaaaggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaatttgatttatttttgtccctta 16261171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 16736099 - 16736191
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  16736099 aaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 16736191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 13354564 - 13354473
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  13354564 aggctaaattgtaattttggtcccttaactatttaggtagtatcgctttgatcccttaattaaaattcgatttattttggtcccttaacttc 13354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 18565386 - 18565300
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| ||||||||||||    
T  18565386 taaattgcatttttggtcccttaactatttaggtagtatcgcttgggtcccttaattaaaattcgatttattttggttccttaactt 18565300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 310
Target Start/End: Complemental strand, 36211791 - 36211697
Alignment:
Q  220 ttaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaact 310  Q
    ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||    
T  36211791 ttaaatggctaaattgtatttttggtctcttaactatttaggtagtatcgctttcgtcccttaattaaaattcgatttattttggtcccttaact 36211697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 39912630 - 39912716
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || | |||||||    
T  39912630 taaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtccgttaactt 39912716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 312
Target Start/End: Original strand, 17856192 - 17856289
Alignment:
Q  219 attaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| |||||||||  ||||| |||||| ||||||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  17856192 attaaagggctaaatttcattttcggtcccttaattatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 17856289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 28631663 - 28631570
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||||||||||||||||| ||| ||||| ||||||||||||    || |||||||||| ||  |||||||||||| ||||||||||    
T  28631663 aaaggttaaattgtatttttggtcccttaactatttgggtagtatcgctttgctctcttaattaaaattcgatttattttagtcccttaacttc 28631570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 13354175 - 13354267
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| ||||| |||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  13354175 aaggctaaattgaattttcggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 13354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 40694193 - 40694285
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||| |    ||||||||||||  ||  |||||||||||| ||||||||||    
T  40694193 aaggctaaattatatttttggtcccttaactatttaggtagtatcgttttagtcccttaattaacattcgatttattttagtcccttaacttc 40694285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 41377353 - 41377444
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  41377353 aaggctaaattgtatttttggt-ccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 41377444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 41377740 - 41377644
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||| |||||||||||| ||| ||||||||||||||| ||    |||| |||||||| ||| ||||||||| || |||||||||| |||||    
T  41377740 ggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtcccgtaattaaaatttgatttattttggtcccttaacttctctttg 41377644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 20908897 - 20908851
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  20908897 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctt 20908851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 31450662 - 31450712
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  31450662 aaaaggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 31450712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 34820662 - 34820575
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| |||||||||||| |||||    |||||||| |||| ||| ||||||||| || ||||||||||    
T  34820662 taaattgtatttttggtcccttaactatttaggtagtctcgctttggtcccttaactaaaatttgatttattttggtcccttaacttc 34820575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 4104159 - 4104249
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| ||  |||||||||    
T  4104159 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtatcttaacttc 4104249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 38275480 - 38275570
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttccct 315  Q
    ||||||||||||||| |||| ||| |||||| ||||||| ||||    |||||||||||| ||| ||||||||| |||| |||||||||||    
T  38275480 taaattgtatttttgatcccttaactatttatgtagtattgctttggtcccttaattaaaatttgatttattttggttctttaacttccct 38275570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 5961667 - 5961759
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| |||||||| ||| ||| ||||||||||||||||||    |||| ||||||||  || ||||||||| || ||||||||||    
T  5961667 aaggctaaattgcatttttggccccttaactatttaggtagtatcgctttgatcccataattaaaaattgatttattttggtcccttaacttc 5961759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 28203248 - 28203156
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| |||||||||||| ||| ||||||||| ||||||||    ||||||||||||| ||  ||||||||| || | ||||||||    
T  28203248 aaggctaaattgcatttttggtcccttaactatttaggtcgtatcgctttggtcccttaattaaaattcgatttattttggtcctttaacttc 28203156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 12303786 - 12303873
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaact 310  Q
    ||||||||| |||||||||||| ||| ||||||||||||||||||    || |||||||||| ||  ||||||||| || ||||||||    
T  12303786 gctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcacttaattaaaattcgatttattttggtcccttaact 12303873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 16655989 - 16655902
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| |||||||||||||||| |    ||| |||| |||| ||| ||||||||| || ||||||||||    
T  16655989 taaattgtatttttggtcccttaactatttaggtagtatcgttttggtcctttaactaaaatttgatttattttggtcccttaacttc 16655902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 17856576 - 17856485
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| | |    ||||||||||||| ||| ||||||||| ||  |||||||||    
T  17856576 aggctaaattgcatttttggtcccttaactatttaggtagtattggtttggtcccttaattaaaatttgatttattttggtctcttaacttc 17856485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 18565065 - 18565156
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||| | ||| |||||||| |||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  18565065 aggctaaattgcatttttggtctcttaactatttaggcagtatcgctttagtcccttaattaaaattcgatttattttggtcccttaacttc 18565156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 27476754 - 27476663
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||| | ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  27476754 aggctaaattgcatttttggtctcttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcccttaacttc 27476663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 28631285 - 28631364
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| ||| ||||||||||| |||||||    |||||||||||| ||  |||||||||||| ||||||||||    
T  28631285 atttttggtcccttaactatttaggtagcatcgctttggtcccttaattaaaattcgatttattttagtcccttaacttc 28631364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 4120758 - 4120810
Alignment:
Q  220 ttaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||| |||||||||| |||||| ||||| ||| |||||||||||||||||||    
T  4120758 ttaaacggctaaattgcattttttgtcccttaactatttaggtagtatcgctt 4120810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 21470669 - 21470591
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgct---tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| ||||| ||| ||||||||||||||||||   ||||||||||||| ||  ||||||||| || ||||||||||    
T  21470669 atttttagtcccttaactatttaggtagtatcgcttggtcccttaattaaaattcgatttattttggtcccttaacttc 21470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 32933977 - 32933881
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||| |||||||||||| ||| |||||||||| |||||||    ||| |||| |||| ||  ||||||||| || |||||||||| |||||    
T  32933977 ggctaaattgcatttttggtcccttaactatttaggtaatatcgctttggtcctttaaataaaattcgatttattttggtcccttaacttctctttg 32933881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 34127948 - 34127860
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||| ||| ||| |||||| |||||||||||    |||||||| |||||||  |||||||||  | ||||||||||    
T  34127948 ctaaattgtatttttggacccttaactatttaagtagtatcgctttggtcccttaactaaagttcgatttattttgatcccttaacttc 34127860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 37744451 - 37744539
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||  |||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||| |||||||||  | ||||||||||    
T  37744451 ctaaattacatttttggtcccttaactatttaggtagtatcactttggtcccttaattaaaatttgatttattttgatcccttaacttc 37744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 39150212 - 39150165
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  39150212 aggctaaattgcatttttggtcctttaactatttaggtagtatcgctt 39150165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 4121146 - 4121059
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||| |||||||||||||||| |    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  4121146 taaattgcatttttggtcccttaactatttaggtagtatcgttttggtcctttaattaaaattcgatttattttggtcccttaacttc 4121059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 12304175 - 12304125
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||| || ||| |||||||||||| ||| |||||||||||||||||||    
T  12304175 aaaaggcaaatttgcatttttggtcccttaactatttaggtagtatcgctt 12304125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 14877482 - 14877573
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||||||  || |||||||||||||||| |    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  14877482 aggctaaattgcatttttggtcccaaaactatttaggtagtatcgatttggtccattaattaaaattcgatttattttggtcccttaacttc 14877573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 16655610 - 16655648
Alignment:
Q  230 aaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  16655610 aaattgtatttttggtcccttaactatttaggtagtatc 16655648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 27476369 - 27476452
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgc----ttcccttaattaaagtttaatttattttagttccttaa 308  Q
    ||||||||||||||||||||   | |||||||||||||||||    |||||||||||||| ||  ||||||||| || ||||||    
T  27476369 taaattgtatttttggtccctagactatttaggtagtatcgctttgttcccttaattaaaattcgatttattttggtcccttaa 27476452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 28202860 - 28202906
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||| ||||||||    
T  28202860 ggctaaattgcatttttggtcccttaactatttaggtaatatcgctt 28202906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 298
Target Start/End: Complemental strand, 36442519 - 36442444
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||| ||||||||||||| ||| ||||||| |||||| |||    ||| ||||||||| |||||||||||||    
T  36442519 gctaaattatatttttggtcccttaactatttagatagtattgctttgatcctttaattaaaatttaatttatttt 36442444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 39454450 - 39454541
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||| |||||||| ||    ||||||||||||| ||  |||||||||  | ||||||||||    
T  39454450 aggctaaattgcatttttggtcccttaactatttaagtagtatcactttggtcccttaattaaaattcgatttattttgatcccttaacttc 39454541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 39913015 - 39912924
Alignment:
Q  225 aggctaaattgtatttttggtcccctaatta-tttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||| |||||||||||| ||| || ||||||||||||| ||    ||||||||||||| ||  ||||||||| || |||||||||    
T  39913015 aggctaaattgcatttttggtcccttaactattttaggtagtatcactttggtcccttaattaaaattagatttattttggtcccttaactt 39912924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 16260872 - 16260917
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||| | |||||||||||| ||| |||||||||||||||||||    
T  16260872 gctaaatagcatttttggtcccttaactatttaggtagtatcgctt 16260917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 27246371 - 27246293
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||||||| |||||||||||| ||| ||||||  ||| ||||||    ||||||||||||| ||| |||||||||    
T  27246371 aaggctaaattgcatttttggtcccttaactatttaattaggatcgctttggtcccttaattaaaatttgatttatttt 27246293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 34127570 - 34127656
Alignment:
Q  230 aaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| |||||||||||| ||| ||||||| |||||||| |    ||||||||||||| || |||||||||| ||  |||||||||    
T  34127570 aaattgcatttttggtcccttaactatttagatagtatcgttttggtcccttaattaaaattcaatttatttttgtcgcttaacttc 34127656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 41659745 - 41659835
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| ||||||| ||||| ||| ||||||  ||||||||||    ||||||||||||| ||| ||||||||| ||  |||||||||    
T  41659745 ggctaaattatattttttgtcccttaactatttaattagtatcgctttggtcccttaattaaaatttgatttattttggtatcttaacttc 41659835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 45389130 - 45389220
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||| ||||||||||||  || |||||||||||| ||| |    ||||||||||||| ||| ||||||||| || | |||||||    
T  45389130 aggctaaattgcatttttggtccctgaactatttaggtagtgtcgttttggtcccttaattaaaatttgatttattttggtccattaactt 45389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 5921773 - 5921676
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||||| |||||| |||| ||| ||||||  ||||||||||    || |||||||||| ||  |||| |||| ||||||||||||| |||||    
T  5921773 aggctaaattgtgtttttgatcccttaactatttatatagtatcgctttggtctcttaattaaaattcgatttttttttgttccttaacttctctttg 5921676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 15137194 - 15137101
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||  |||||||||| | ||| ||||||||||||| || |    ||||||||||||| ||| ||||||||| || | |||||||    
T  15137194 aaaaggctaaattacatttttggtcacataactatttaggtagtaccgatttggtcccttaattaaaatttgatttattttggtcctttaactt 15137101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 34484418 - 34484386
Alignment:
Q  240 tttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||| |||||||||||||||||||||||    
T  34484418 tttggtcccttaattatttaggtagtatcgctt 34484386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 36442132 - 36442176
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||    
T  36442132 aggctaaattgtatttttgttcccttcactatttaggtagtatcg 36442176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 37412595 - 37412639
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||| |||||||||||| ||| ||||||| |||||||||||    
T  37412595 ctaaattgcatttttggtcccttaactatttagttagtatcgctt 37412639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 44610865 - 44610923
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct---tcccttaattaaa 284  Q
    ||||||| |||||||||||| ||| |||||||||| |||||||   |||||||||||||    
T  44610865 taaattgcatttttggtcccttaactatttaggtaatatcgctttgtcccttaattaaa 44610923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 318
Target Start/End: Complemental strand, 13924 - 13831
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || |||||||||| |||||    
T  13924 taaattgtatttttggtcccctaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttctctttg 13831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 34958832 - 34958920
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| ||||||||||||    
T  34958832 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttatttt-gttccttaactt 34958920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 38866397 - 38866488
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    ||| |||| |||| ||| ||||||||| |||||||||||||    
T  38866397 aggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtccattaactaaaatttgatttattttggttccttaacttc 38866488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 52914951 - 52915042
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  52914951 aggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 52915042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 40067734 - 40067644
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||    |||||||| |||| || |||||||||| |||||||||||||    
T  40067734 ggctaaattgtatttttgatcccttaactatttaggtagtatcgctttggtcccttaactaaaattcaatttattttggttccttaacttc 40067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 32385194 - 32385108
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct---tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||   |||||||| |||| ||| ||||||||| |||||||||||||    
T  32385194 taaattgcatttttggtcccttaactatttaggtagtatcgctttatcccttaactaaaatttgatttattttggttccttaacttc 32385108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 21217845 - 21217937
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  21217845 aaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 21217937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 45911964 - 45911884
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||    ||||||||||||| ||  |||||||||    
T  45911964 aaaaggctaaattgtatttttggtcccctaactatttaggtagtatcactttggtcccttaattaaaattcgatttatttt 45911884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 9010495 - 9010601
Alignment:
Q  216 tttattaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||| | ||||||||||| |||||||||||| ||||||||||||||||||| ||    ||||||||||||| ||  ||||||||| || | |||||||    
T  9010495 tttatttataggctaaattgcatttttggtcccttaattatttaggtagtatcactttggtcccttaattaaaattcgatttattttggtcctttaactt 9010594  T
Q  312 ccctttg 318  Q
    | |||||    
T  9010595 ctctttg 9010601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 33882331 - 33882246
Alignment:
Q  230 aaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || |||||||||    
T  33882331 aaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaactt 33882246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 46535523 - 46535608
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttcctta 307  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||  ||||||||| ||||||||    
T  46535523 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaattcgatttattttggttcctta 46535608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 9010893 - 9010801
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  9010893 aaggctaaattatatttttggtcccttaactatttaggtagtatctctttggtcccttaattaaaattcgatttattttggtcccttaacttc 9010801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 29864559 - 29864471
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| ||  |||||||||    
T  29864559 ctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtctcttaacttc 29864471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 44169976 - 44170068
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||||||||||||||| ||| ||||||  ||||||||||    |||||| |||||| ||| ||||||||||||  ||||||||    
T  44169976 aaaggctaaattgtatttttggtcccttaactatttaattagtatcgctttggtcccttgattaaaatttgatttattttagtatcttaactt 44170068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 54136087 - 54136167
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||    
T  54136087 aaaaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttatttt 54136167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 32384653 - 32384699
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  32384653 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctt 32384699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 43317266 - 43317175
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||| ||| ||||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || | ||||||||    
T  43317266 aggctaaattgcatttttagtctcctaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcctttaacttc 43317175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 21218233 - 21218143
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| ||||||| |||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  21218233 ggctaaattgcatttttgatcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 21218143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 43316879 - 43316968
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||||||||||||  ||| |||| ||||||||||||||    |||||||||||| ||| ||||||||| || |||||||||    
T  43316879 aggctaaattgtatttttggtcct-taactattaaggtagtatcgctttggtcccttaattaaaattttatttattttggtcccttaactt 43316968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 46200480 - 46200574
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||  |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  46200480 aaaaggctaaattgcatttttggtcccttaactatttaggtagtatcattttggtcccttaattaaaattcgatttattttggtcccttaacttc 46200574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 18862827 - 18862738
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    ||| ||||||||| ||  ||||||||| || |||||||||    
T  18862827 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctttgatcctttaattaaaattcgatttattttggtcccttaactt 18862738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 29970196 - 29970269
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| |||||||||    
T  29970196 taaattgcatttttggtcccataactatttaggtagtatcgctttgatcccttaattaaaatttgatttatttt 29970269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 37515842 - 37515749
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||| ||||||| ||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  37515842 aaaggttaaattttatttttagtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 37515749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 318
Target Start/End: Complemental strand, 44433014 - 44432914
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttcccttt 317  Q
    ||||||| |||||| |||||||||||| ||| ||||||| ||||||| ||    |||||||| |||| ||| ||||||||| || |||||||||| ||||    
T  44433014 aaaaggcaaaattgcatttttggtcccttaactatttagatagtatcactttggtcccttaactaaaatttgatttattttggtcccttaacttctcttt 44432915  T
Q  318 g 318  Q
    |    
T  44432914 g 44432914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 25218095 - 25218174
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| ||| |||||||||| ||||||||    |||||||||||| ||  |||||||||||| ||||||||||    
T  25218095 atttttggtcccttaactatttaggtaatatcgctttggtcccttaattaaaattcgatttattttagtcccttaacttc 25218174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 29864174 - 29864265
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||| ||||||  |||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || |||||||||    
T  29864174 aaggctaaattgcattttttatcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaactt 29864265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 44710403 - 44710449
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||    
T  44710403 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 44710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 45911582 - 45911669
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| ||||||||| |  ||| |||||||||||||||||||    |||||||||||| ||| ||||||||| || ||||||||||    
T  45911582 taaattgcatttttggttcattaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 45911669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 48209945 - 48210024
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||  |||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||| |||||||||    
T  48209945 aaaggctaaattacatttttggtcccttaactatttaggtagtatcactttggtcccttaattaaaatttgatttatttt 48210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 1157589 - 1157503
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||    ||| ||||||||| ||  ||||||||| || |||||||||    
T  1157589 taaattgtatttttagtcccttaactatttaggtagtatcgctttggtcctttaattaaaattcgatttattttggtcccttaactt 1157503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 1205763 - 1205673
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| |||||||| |||||||||    ||||||||||||| ||  ||||||||| || ||||| ||||    
T  1205763 ggctaaattgcatttttggtcccttaactatttaggcagtatcgcttttctcccttaattaaaattcgatttatttttgtcccttaccttc 1205673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 12381442 - 12381344
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||| ||||||||||||||||||  || |||||||| | |||||||    ||||||||||||| ||  ||||||||| || |||||||||| |||||    
T  12381442 aaggcttaattgtatttttggtccctaaactatttaggcaatatcgctttcatcccttaattaaaattcgatttattttggtcccttaacttctctttg 12381344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 33626250 - 33626160
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||  |||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||  ||||||||| || ||||||||||    
T  33626250 ggctaaatttcatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaattcgatttattttggtcccttaacttc 33626160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 40067345 - 40067394
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  40067345 aaaggctaaattgtattttttgtcccttaactatttaggtaatatcgctt 40067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 46200871 - 46200781
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||| | ||| ||||||||||||| ||||    ||||||||||||| || |||||||||| ||  |||||||||    
T  46200871 ggctaaattgcatttttggtctcttaactatttaggtagtaacgctttggtcccttaattaaaattcaatttattttggtctcttaacttc 46200781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 312
Target Start/End: Complemental strand, 4793995 - 4793895
Alignment:
Q  215 atttattaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaact 310  Q
    |||| |||||||| |||||||||||||| | ||||| |||||||||||||||||| |    |||||||| |||| ||  ||||||||| || ||||||||    
T  4793995 atttgttaaaaggttaaattgtattttt-gaccccttattatttaggtagtatcgttttggtcccttaactaaaattcgatttattttggtcccttaact 4793897  T
Q  311 tc 312  Q
    ||    
T  4793896 tc 4793895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 33625868 - 33625953
Alignment:
Q  230 aaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || | |||||||    
T  33625868 aaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcctttaactt 33625953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 43969556 - 43969600
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||    
T  43969556 ctaaattgtatttttggtcccttaattatttatgtagtattgctt 43969600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 54191969 - 54191880
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||||| ||| ||||||| ||| |||| |    ||||||||||||| ||  ||||||||| |||| ||||||||    
T  54191969 gctaaattgtatttttggtcccttaactatttagatagcatcgttttggtcccttaattaaaattcgatttattttggttcattaacttc 54191880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 9657667 - 9657743
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||||||||||||| ||| ||||||  |||||||| |    ||||||||||||| ||| |||||||||    
T  9657667 ggctaaattgtatttttggtcccttaactatttaattagtatcgttttggtcccttaattaaaatttgatttatttt 9657743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 22831187 - 22831095
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||| ||||||| |||||||||||| ||| ||||| | ||||||||||    ||||||||||||| ||| ||||||||| ||  ||||||||    
T  22831187 aaaggttaaattggatttttggtcccttaactattttgctagtatcgctttggtcccttaattaaaatttgatttattttggtatcttaactt 22831095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 46621317 - 46621270
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||||||||    
T  46621317 aaaaggttaaattgcatttttggtcccttaactatttaggtagtatcg 46621270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 1157206 - 1157289
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgcttc----ccttaattaaagtttaatttattttagttccttaa 308  Q
    ||||||| |||||||||||| ||| |||||| ||| ||||||||     ||||||||||| ||||||||||||| || ||||||    
T  1157206 taaattgcatttttggtcccttaactatttaagtaatatcgctttggttccttaattaaaatttaatttattttggtcccttaa 1157289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 10014465 - 10014511
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||||||| ||||    
T  10014465 ggctaaattgcatttttggtcccttaactatttaggtagtattgctt 10014511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 10021606 - 10021652
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||||||| ||||    
T  10021606 ggctaaattgcatttttggtcccttaactatttaggtagtattgctt 10021652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 25058836 - 25058923
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||| ||| | ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| ||  |||||||||    
T  25058836 taaattgcattttttgtctcttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtctcttaacttc 25058923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 1205381 - 1205467
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || | |||||||    
T  1205381 taaattgcacttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcctttaactt 1205467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 10017815 - 10017856
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||||||||| |||||||||||| ||| ||||||||||||||    
T  10017815 ggctaaattgcatttttggtcccttaactatttaggtagtat 10017856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 27347597 - 27347687
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| ||||||||||||| | | ||||||| ||||||||||    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  27347597 ggctaaattatatttttggtcccttgactatttagatagtatcgctttggtcctttaattaaaattcgatttattttggtcccttaacttc 27347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 46535912 - 46535867
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||| |||||||||||||||||||| | ||| ||||||||||||||    
T  46535912 aaaaagctaaattgtatttttggtcacttaactatttaggtagtat 46535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 38416522 - 38416430
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    || |||||||||| ||  ||||||||| |||||||||||||    
T  38416522 aaggctaaattgtatttttggtctcttaattatttaggtagtatcgctttgctcacttaattaaaattcgatttattttggttccttaacttc 38416430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 42710736 - 42710640
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| |||||||||  | |||||||||| |||||    
T  42710736 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttgatcccttaacttctctttg 42710640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 3878479 - 3878527
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3878479 aaggctaaattgtatttttggtcccttaattatttaggtagtatcgctt 3878527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 5087805 - 5087897
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||| |||||||||||| ||| ||||||||||||||||||    |||||||| |||| || |||||||||| |||||||||||||    
T  5087805 aaggcgaaattgaatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaattcaatttattttggttccttaacttc 5087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 36751904 - 36751992
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||  ||| |||||||||||||||| |    ||||||||||||| ||| |||||||||||| ||||||||||    
T  36751904 ctaaattgtatttttggtcctttaactatttaggtagtatcgatttggtcccttaattaaaatttgatttattttagtcccttaacttc 36751992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 7399076 - 7399167
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  7399076 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 7399167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 10656092 - 10656170
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||| |||||||||    
T  10656092 aaggctaaattgtatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaatttgatttatttt 10656170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 312
Target Start/End: Complemental strand, 7399471 - 7399374
Alignment:
Q  220 ttaaaaggctaaattgtatttttg-gtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| || ||||||  ||||| ||||||||||||||||||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  7399471 ttaaaaggctaaactgcatttttttgtcccttaattatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 7399374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 5460182 - 5460265
Alignment:
Q  220 ttaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttta 299  Q
    ||||||||||||||||||||||||||||| ||| |||||||  |||||||||    ||||||||||||| ||  ||||||||||    
T  5460182 ttaaaaggctaaattgtatttttggtcccttaactatttagacagtatcgctttggtcccttaattaaaattcgatttatttta 5460265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 5624382 - 5624469
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||| | ||| |||||||||||||||| |    ||||||||||||| ||| ||||||||| || ||||||||||    
T  5624382 taaattgtatttttggtctcttaactatttaggtagtatcgttttggtcccttaattaaaatttgatttattttggtcccttaacttc 5624469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 15476269 - 15476356
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| ||  |||||||||    
T  15476269 taaattatatttttggtcccttaactatttaggtagtatcgctttgatcccttaattaaaattttatttattttggtctcttaacttc 15476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 26289027 - 26289110
Alignment:
Q  233 ttgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || | ||||||||    
T  26289027 ttgtatttttggtcccttaactatttaggtagtatcgctttcgtcccttaattaaaatttgatttattttggtcctttaacttc 26289110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 36752288 - 36752192
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgcttc---ccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| ||| |||||| |||||||||||||   ||||||||||| ||  ||||||||| || | |||||||| |||||    
T  36752288 aggctaaattgcatttttggtcccttaactatttatgtagtatcgcttcaatccttaattaaaattcgatttattttggtccattaacttctctttg 36752192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 9692919 - 9693008
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || |||| |||||    
T  9692919 ggctaaattgtatttttggt-ccctaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttgacttc 9693008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 10656480 - 10656390
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| ||||||| |||| ||| ||||||||||||||||||    ||| |||| |||| ||| |||||||||||| ||||||||||    
T  10656480 ggctaaattgcatttttgatcccttaactatttaggtagtatcgctttggtcctttaagtaaaatttgatttattttagtcccttaacttc 10656390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 29023934 - 29023983
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  29023934 aaaggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 29023983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 31908928 - 31909020
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattat--ttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| || ||| |||  ||||||||||||||||    |||||||||||| || |||||||||| || ||||||||||    
T  31908928 ggctaaattgtatttttggtgccttaactatatttaggtagtatcgctttgatcccttaattaaaattcaatttattttggtcccttaacttc 31909020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 35263493 - 35263590
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||  ||||||||| || | |||||||| |||||    
T  35263493 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaattcgatttattttggtcctttaacttctctttg 35263590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 35263883 - 35263839
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  35263883 aaaggctaaattgcatttttggtcccttaattatttaggtagtat 35263839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 5088515 - 5088468
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||    
T  5088515 aggctaaattgtatttttggtctcttaactatttaggtagtatcgctt 5088468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 17861417 - 17861375
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  17861417 aggctaaattgtatttttggt-ccctaattatttaggtagtatc 17861375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 31909318 - 31909226
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcg----cttcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| ||||||| |||||||||||| ||| | ||||||||||||||    | ||||||||||||| ||| ||||||||| || ||||||||||    
T  31909318 aaggttaaattgcatttttggtcccttaactgtttaggtagtatcgttttcgtcccttaattaaaatttgatttattttggtcccttaacttc 31909226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 12593455 - 12593546
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||| |||| ||| ||||||||||||||||||    |||||||| |||| ||  |||||| || |||||||||||||    
T  12593455 aggctaaattgcatttttgatcccttaactatttaggtagtatcgcttcagtcccttaactaaaattcgatttatattggttccttaacttc 12593546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 12695073 - 12694982
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| |||||| |||||| ||||| ||| ||||||||||||||| |||    |||||||||||| ||| ||||||||| || ||||||||||    
T  12695073 aggccaaattgcatttttagtcccttaactatttaggtagtatcactttggtcccttaattaaaatttgatttattttggtcccttaacttc 12694982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 15670540 - 15670494
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  15670540 aaaggttaaattgtatttttggtcccttaactatttaggtagtatcg 15670494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 21750809 - 21750900
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||  ||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  21750809 aggctaaattgcctttttggtcccttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcccttaacttc 21750900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 38416142 - 38416233
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||  || | ||||||||||||||||||||||    ||||||||||||| || ||||||||||  || |||||||||    
T  38416142 aggctaaattgcatttttaatctcttaattatttaggtagtatcgctttggtcccttaattaaaattcaatttattttgttttcttaacttc 38416233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 334296 - 334386
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||| ||||  ||| ||||||||||||||| |||    |||||||||||| ||| ||||||||| || ||||||||||    
T  334296 ggctaaattgcatttttagtcctttaactatttaggtagtatcactttggtcccttaattaaaatttgatttattttggtcccttaacttc 334386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 8418569 - 8418524
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||    
T  8418569 gctaaattgcatttttggtcccttaactatttaggtagtatcgctt 8418524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 15476632 - 15476555
Alignment:
Q  239 ttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| ||||| ||||||||||||||||||||||    ||||||||||||| ||| ||||||||| ||  |||||||||    
T  15476632 ttttagtcccttaattatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtctcttaacttc 15476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 5460329 - 5460286
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||    
T  5460329 taaattgtatttttggtcccttaactatttagatagtatcgctt 5460286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 19204943 - 19204986
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  19204943 aggctaaattgcatttttggtcccttaactatttaggtagtatc 19204986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 28392156 - 28392080
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||| ||||||||||| | ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||    
T  28392156 ggctaaattctatttttggtctcttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttatttt 28392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 16353541 - 16353450
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||| |||| ||| |||||| |||||||||||    |||| |||||||| ||  ||||||||| || ||||||||||    
T  16353541 aggctaaattgcatttttgatcccttaactatttaagtagtatcgctttggtcccctaattaaaattcgatttattttggtcccttaacttc 16353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 18514287 - 18514378
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||| |||||| ||    || |||| ||||| || |||||||||| || ||||||||||    
T  18514287 aggctaaattgcatttttggtcccttaactatttaggaagtatccctttggtcgcttagttaaaattcaatttattttggtcccttaacttc 18514378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 26288990 - 26289032
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  26288990 aggctaaattgtatttttggtcccttaactatttaggttgtat 26289032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 40589441 - 40589350
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||| || ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| || | ||||||||    
T  40589441 aggctaaattgcatttttggttccttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcctttaacttc 40589350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 40590044 - 40589953
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| ||||||||| || ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| || | ||||||||    
T  40590044 aggctaaattgcatttttggttccttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcctttaacttc 40589953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 40774726 - 40774647
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||| ||||||| | || ||||||||||| ||||||||||    ||||||||||||| ||  |||||||||    
T  40774726 aaaggctaaattgcatttttgattccttaattatttagctagtatcgctttagtcccttaattaaaattcgatttatttt 40774647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 43570160 - 43570081
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgc----ttcccttaattaaagtttaatttatttt 298  Q
    |||| ||||||||||||||| ||||| ||| ||||||| ||| |||||    |||||||||||||| ||| |||||||||    
T  43570160 aaagactaaattgtattttttgtcccttaactatttagatagcatcgctttgttcccttaattaaaatttgatttatttt 43570081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 3879402 - 3879357
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||||||||||||| |||||||||||| ||| |||||| |||||||    
T  3879402 aaaaggctaaattgcatttttggtcccttaactatttaagtagtat 3879357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 19205332 - 19205283
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||| ||||||| ||||||| |||| ||| |||||||||||||||||||    
T  19205332 aaaggttaaattgcatttttgatcccttaactatttaggtagtatcgctt 19205283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 25923121 - 25923161
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||||||| |||| ||| ||||||||||||||||    
T  25923121 taaattgtatttttgatcccttaactatttaggtagtatcg 25923161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 33699274 - 33699318
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||| |||| ||||||| ||| ||||||||||||||||    
T  33699274 aggctaaattgcatttatggtcccttaactatttaggtagtatcg 33699318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 33762900 - 33762948
Alignment:
Q  225 aggctaaattgtatttttggtcccct-aattatttaggtagtatcgctt 272  Q
    |||||||| || ||| |||||||||| ||||||||||||||||||||||    
T  33762900 aggctaaaatgcattcttggtccccttaattatttaggtagtatcgctt 33762948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 33763299 - 33763248
Alignment:
Q  220 ttaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||| |||||||||| |||||||||||| ||| |||||| ||||||||||||    
T  33763299 ttaaagggctaaattgcatttttggtcccttaactattta-gtagtatcgctt 33763248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 25551345 - 25551436
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| |||    |||||||||| || ||| |||||||||||| |||||||||    
T  25551345 aaggctaaattgtatttttggtcccttaactatttaggtagtattgctttggtcccttaattgaaatttgatttattttagtcccttaactt 25551436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 31029522 - 31029614
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| ||||||| ||||||| |||| ||||||||||||||||||||||    ||||||||||||| || |||||||||| || ||||||||||    
T  31029522 aaggttaaattgcatttttgatcccttaattatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaacttc 31029614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 11524706 - 11524793
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaact 310  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || ||||||||    
T  11524706 gctaaattgtatttttggtcctttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaact 11524793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 12903221 - 12903310
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||    ||||||||||||| || |||||||||| || |||||||||    
T  12903221 ggctaaattgtatttttggttctttaattatttagatagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaactt 12903310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 3338476 - 3338567
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||| ||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  3338476 aggctaaattgcattttttgtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 3338567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 9173901 - 9173947
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  9173901 ggctaaattgtatttttggtcccttaactatttaggtagtatcgctt 9173947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 33329201 - 33329296
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||| ||||||| |||| ||| |||||||||||||| |||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  33329201 taaaaggctaaattgcatttttgatcccttaactatttaggtagtattgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 33329296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 25551726 - 25551632
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| |||||||||||||||||||| ||| |||||| |||||||||||    |||| |||||||| ||  ||||||||| || ||||||||||    
T  25551726 aaaaggttaaattgtatttttggtcccttaactatttaagtagtatcgctttggtcccctaattaaaattcgatttattttggtcccttaacttc 25551632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 24604872 - 24604960
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttcctta 307  Q
    ||||| ||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || |||||    
T  24604872 aaaggttaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtccctta 24604960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 35132981 - 35132930
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  35132981 taaaaggctaaattgtattttcggtcccttaactatttaggtagtaccgctt 35132930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 3338862 - 3338771
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| ||||||||||||| ||| |||||| ||||||||| |    ||||||||||||| ||  ||||||||| |||| ||||||||    
T  3338862 aggctaaattttatttttggtcccttaactatttaagtagtatcgttttgatcccttaattaaaattcgatttattttggttctttaacttc 3338771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 3289296 - 3289206
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgcttc----ccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| ||||||||||||  || |||||||||| ||||||||     ||||||||||| ||| ||||||||| || ||||||||||    
T  3289296 ggctaaattgcatttttggtccctaaactatttaggtaatatcgctttggtgccttaattaaaatttgatttattttggtcccttaacttc 3289206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 11524778 - 11524852
Alignment:
Q  239 ttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaac 309  Q
    |||||||||| ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || |||||||    
T  11524778 ttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaac 11524852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 33548246 - 33548197
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||| |||||| ||||| ||| |||||||||||||||||||    
T  33548246 aaaggctaaattgaatttttagtcccttaactatttaggtagtatcgctt 33548197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 13155836 - 13155929
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||| ||||||||||| | ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||||||  |||||||||    
T  13155836 aaaggataaattatatttttggtctcttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttagtcgcttaacttc 13155929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 13160692 - 13160785
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||||| ||||||||||| | ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||||||  |||||||||    
T  13160692 aaaggataaattatatttttggtctcttaactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttagtcgcttaacttc 13160785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 35132599 - 35132647
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  35132599 aaggctaaattgcatttttggtccattaactatttaggtagtatcgctt 35132647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 3288929 - 3288976
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||| |||| ||||||| ||| |||||||||||||||||||    
T  3288929 aggctaaattgcatttatggtcccttaactatttaggtagtatcgctt 3288976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 11525153 - 11525057
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctt 316  Q
    |||||||||||| |||||||||||| |||  ||||||||||||||| |    ||||||| ||||| || |||||||||| ||  |||||||| ||||    
T  11525153 aaggctaaattgcatttttggtcccttaacaatttaggtagtatcggtttggtcccttatttaaaattcaatttattttggtctcttaactttcctt 11525057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 14336902 - 14336998
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||    ||| ||||||||| ||  ||||||||| || | |||||||| |||||    
T  14336902 ggctaaattgcatttttgatcccttaattatttagctagtatcgctttggtcctttaattaaaattcgatttattttggtcctttaacttctctttg 14336998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 29009949 - 29010000
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||| |||||||| |||||||||||| ||| |||||| ||||||||||||    
T  29009949 taaaagactaaattgaatttttggtcccttaactatttacgtagtatcgctt 29010000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 6220059 - 6220146
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| ||||||  || |||||||    || |||||||||| ||| ||||||||| || ||||||||||    
T  6220059 taaattgtatttttggtcccttaactatttaattaatatcgctttcgtctcttaattaaaatttgatttattttggtcccttaacttc 6220146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 17245713 - 17245667
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||||| |||||||||||| ||||||||||  ||||||||    
T  17245713 aaaggctaaattgcatttttggtcccttaattatttaattagtatcg 17245667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 33545209 - 33545118
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||| |  ||| ||||||||||||||| ||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  33545209 aggctaaattatatttttggtgcattaactatttaggtagtatcactttgatcccttaattaaaattcgatttattttggtcccttaacttc 33545118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 1860871 - 1860782
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| ||||||||| ||||| ||    ||||||||||||| ||  ||||||||  |||||||||||||    
T  1860871 ggctaaattgcatttttggtcccttaactatttaggt-gtatctctttggtcccttaattaaaattcgatttatttgggttccttaacttc 1860782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 32283026 - 32283116
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| ||||||||||||| ||| ||||||  ||||||| ||    ||||||||||||| ||| ||||||||| ||  |||||||||    
T  32283026 ggctaaattatatttttggtcccttaactatttaattagtatcactttggtcccttaattaaaatttgatttattttggtatcttaacttc 32283116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 33544818 - 33544912
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| ||||||| |||||||||||| ||| |||||| ||||||| |||    ||||||||||||| ||  ||||||||| || | ||||||||    
T  33544818 aaaaggttaaattgcatttttggtcccttaactatttaagtagtattgctttggtcccttaattaaaattcgatttattttggtcctttaacttc 33544912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 1158599 - 1158684
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||||  ||| ||||||||||||||||||    ||| ||||||||| ||  ||||||||| || |||||||||| |||||    
T  1158599 atttttggtcctttaactatttaggtagtatcgctttggtcctttaattaaaattcgatttattttggtcccttaacttctctttg 1158684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 19135833 - 19135789
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||||    
T  19135833 aggctaaattgcatttttggtccattaagtatttaggtagtatcg 19135789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 33971925 - 33971969
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    ||||| ||||||| |||||||||||| ||| ||||||||||||||    
T  33971925 aaaggttaaattgcatttttggtcccttaactatttaggtagtat 33971969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 9034702 - 9034608
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccct 315  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||    || |||||||||| ||| ||||||||| || |||||||||||||    
T  9034702 aggctaaattgtatttttggtcctttaactatttaggtagtatcgctttggtctcttaattaaaatttgatttattttggtcccttaacttccct 9034608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 31716010 - 31715931
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| |||||||||    
T  31716010 aaaggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttatttt 31715931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 35085738 - 35085835
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||| ||||||||| ||  ||||||||| || |||||||||| |||||    
T  35085738 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcctttaattaaaattcgatttattttggtcccttaacttctctttg 35085835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 47251285 - 47251193
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||| |||||| ||||| ||| |||||||||||||| |||    || |||||||||| ||||||||||||| || |||||||||    
T  47251285 aaaggctaaattgcattttttgtcccttaactatttaggtagtattgctttggtctcttaattaaaatttaatttattttggtcccttaactt 47251193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 23472942 - 23472847
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttcccttt 317  Q
    |||||||||| |||||||||||| ||| |||||||||||| |||||    ||||||||||||| ||  ||||||||| || |||||||||| ||||    
T  23472942 ggctaaattgcatttttggtcccttaactatttaggtagtttcgctttggtcccttaattaaaattcgatttattttggtcccttaacttctcttt 23472847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 32706731 - 32706822
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| | ||    |||||||||||| ||  ||||||||| |||||||||||||    
T  32706731 aggctaaattgcatttttggtcccttaactatttaggtagtattgtttttgacccttaattaaaattcgatttattttggttccttaacttc 32706822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 43726247 - 43726333
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| |||||||||| ||||| |||||    ||||||||||||| ||| ||||| ||| |||||||||||||    
T  43726247 taaattgtatttttggtcccttaattatttaagtagtctcgctttggtcccttaattaaaatttgattta-tttggttccttaacttc 43726333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 31715632 - 31715722
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||||||| ||| | ||| |||||||||||||||||||    |||||||||||| ||  ||||||||| || |||||||||    
T  31715632 aggctaaattgtattttttgtctcttaactatttaggtagtatcgctttgaccccttaattaaaattcgatttattttggtcccttaactt 31715722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 35086128 - 35086030
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||||| |||||||||||  ||| ||||||||||||||||||    |||||||| |||| ||| ||||||| | || |||||||||| |||||    
T  35086128 aaggctaaattgcatttttggtcctttaactatttaggtagtatcgctttggtcccttaactaaaatttgatttattgtggtcccttaacttctctttg 35086030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 311
Target Start/End: Complemental strand, 44448295 - 44448209
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||| |||||| ||||  |||||||||| ||||||||||||    |||||||||||| ||||||||||||| || |||||||||    
T  44448295 taaattggatttttagtcctttaattatttaagtagtatcgctttggtcccttaattaaaatttaatttattttggtcccttaactt 44448209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 8769666 - 8769581
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaac 309  Q
    |||||||| |||||| ||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| || |||||||    
T  8769666 ctaaattgcatttttagtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttattttggtcccttaac 8769581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 18731019 - 18731108
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||| |||||||||||| ||| ||||||| ||||||||||    ||||||||||||| ||  ||||||||| || |||||||||    
T  18731019 ggctaaattgcatttttggtcccttaactatttagatagtatcgctttgatcccttaattaaaattcgatttattttggtcccttaactt 18731108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 23472592 - 23472636
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  23472592 aggctaaattgtatttttggtcccttaactatttaggtagtatcg 23472636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 47250935 - 47250842
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||| ||    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  47250935 aaaggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtcctttaattaaaattcgatttattttggtcccttaacttc 47250842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 47305127 - 47305216
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||||||||||||| ||| ||||||  ||||||||||    ||||||||||||| ||| ||||||||| ||  ||||||||    
T  47305127 ggctaaattgtatttttggtcccttaactatttaattagtatcgctttggtcccttaattaaaatttgatttattttggtatcttaactt 47305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 2357439 - 2357351
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| ||    ||||||| |||| || |||||||||| || ||||||||||    
T  2357439 ctaaattgtatttctggtcccttaactatttaggtagtatcgttttgggcccttaactaaaattcaatttattttggtcccttaacttc 2357351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 11679088 - 11679012
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||    ||||||||||||| ||  |||||||||    
T  11679088 ggctaaattgtatttttggtcccttaactatttaagtagtatcgctttggtcccttaattaaaattcgatttatttt 11679012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 21522604 - 21522513
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| |||||||| ||||||||||| ||| ||||||||||| ||||||    ||||||||||||| ||| ||||||||| | |||||||||||    
T  21522604 aaggttaaattgtgtttttggtcccttaactatttaggtagcatcgctttggtcccttaattaaaatttgatttatttt-ggtccttaacttc 21522513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 32707118 - 32707071
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  32707118 aggctaaattgtatttttagtcccttaattatttagatagtatcgctt 32707071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 311
Target Start/End: Complemental strand, 48704193 - 48704105
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || | |||||||    
T  48704193 gctaaatgatatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcctttaactt 48704105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 39118013 - 39118100
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||  |||||||||  |||| |||||||    
T  39118013 taaattgtatttttggtcccttaactatttaggtagtatcgttttgatcccttaattaaatttcgatttattttgattccctaacttc 39118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 44486318 - 44486232
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    |||||||||| |||||||||||  ||| ||||||||||||||||||    ||| ||||||||  ||||||||||||| || ||||||    
T  44486318 ggctaaattgcatttttggtcctttaactatttaggtagtatcgctttggtcctttaattaatatttaatttattttggtcccttaa 44486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 10625472 - 10625428
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||    
T  10625472 aaggctaaattgcatttttggtcccttaactatttaggtagtatc 10625428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 21522226 - 21522266
Alignment:
Q  232 attgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  21522226 attgcatttttggtcccttaattatttaggtagtatcgctt 21522266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 473189 - 473281
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||| ||||||| || | ||| |||||||| |||||||||    |||||||| |||| ||  ||||||||| ||||||||||||    
T  473189 aaaggctaaattgcatttttgatcgcttaactatttaggcagtatcgctttggtcccttaactaaaattcgatttattttggttccttaactt 473281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 34568585 - 34568673
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||| ||||  ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||  | ||||||||||    
T  34568585 ctaaattgtattttttgtcctttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttgatcccttaacttc 34568673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 43140694 - 43140774
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||| ||||||| |||||| ||||| ||| ||||||| ||||||||||    ||||||||||||| ||| |||||||||    
T  43140694 aaaaggttaaattgcatttttagtcccttaactatttagatagtatcgctttggtcccttaattaaaatttgatttatttt 43140774  T

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Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 5238450 - 5238537
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    ||||||||||| ||||||| |||  ||| | ||||||||||||||||    ||||||||||||| || |||||||||| || ||||||    
T  5238450 aggctaaattgcatttttgatccattaactgtttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaa 5238537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 9231064 - 9230973
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||||||| |||  ||||||||||||||| |    ||||||||||||  ||| ||||||||| ||  |||||||||    
T  9231064 aggctaagttgtatttttggtcccttaacgatttaggtagtatcgttttggtcccttaattaagatttgatttattttggtcacttaacttc 9230973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 11678699 - 11678793
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||| |||||||||||  ||| ||||||| || |||| ||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  11678699 aaaaggctaaattgcatttttggtcctttaaatatttagataatatcactttggtcccttaattaaaattcgatttattttggtcccttaacttc 11678793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 22338664 - 22338586
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||||||| |||||||||||| ||| || |||  ||||||||||    ||||||||||||| ||| |||||||||    
T  22338664 aaggctaaattgcatttttggtcccttaactaattaattagtatcgctttcgtcccttaattaaaatttcatttatttt 22338586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 10625105 - 10625149
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||  |||||||||||| ||| ||||||||||||||||    
T  10625105 aggctaaattacatttttggtcccttaactatttaggtagtatcg 10625149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 23437151 - 23437228
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    ||||||||||| ||||||| | || ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||    
T  23437151 aggctaaattgcatttttgattccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttatttt 23437228  T

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Target: scaffold0051 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 40351 - 40427
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattt 297  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    ||||||||||||| ||| ||||||||    
T  40351 aggctaaattgtatttttggtcccttaattatttagatagtatcgctttagtcccttaattaaaatttgatttattt 40427  T

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Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 40738 - 40648
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| |||||||||||||| |||    ||||||||||||| ||  ||||||||| |||| ||||||||    
T  40738 ggctaaattgcatttttggtcccttaactatttaggtagtattgctttggtcccttaattaaaattcgatttattttggttcattaacttc 40648  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 10654029 - 10654119
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||    ||||||||||||| || |||||||||| || ||||||||||    
T  10654029 aggctaaattgcatttttggtcccttaattatttaggtagta-cgctttggtcccttaattaaaattcaatttattttggtcccttaacttc 10654119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 16268076 - 16267986
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||| ||||||||| | |||||||||||    
T  16268076 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgatttatttt-ggtccttaacttc 16267986  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 29256835 - 29256922
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || ||||||||||    
T  29256835 taaattatatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaacttc 29256922  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 36077270 - 36077357
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||    ||||||||||||| || |||||||||| || ||||||    
T  36077270 aggctaaattgcatttttggtcccttaattatttaggtagtatcactttggtcccttaattaaaattcaatttattttggtcccttaa 36077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 318
Target Start/End: Original strand, 52412596 - 52412694
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||| |  |||||||||||| ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || |||||||||| |||||    
T  52412596 aaggctaaaatacatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaacttctctttg 52412694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 11797147 - 11797232
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaa 308  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||    ||||||||||||| || |||||||||| || ||||||    
T  11797147 gctaaattgcatttttggtcctttaattatttaggtagtatcgcttttgtcccttaattaaaattcaatttattttggtcccttaa 11797232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 16267716 - 16267805
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| |||||||||||| ||| |||||||||| |||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  16267716 gctaaattgcatttttggtcccttaactatttaggtaatatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 16267805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 18793688 - 18793781
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  18793688 aaagtctaaatttcatttttggtcccttaattatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 18793781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 9881551 - 9881642
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||| ||||||| ||  ||||||||| || ||||||||||    
T  9881551 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtccctaaattaaaattcgatttattttggtcccttaacttc 9881642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 23281397 - 23281306
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || || |||||||    
T  23281397 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccataacttc 23281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 32563954 - 32564049
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||| |||||||||||| ||| ||||||||  ||||| ||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  32563954 taaaaggctaaattgcatttttggtcccttaactatttaggctgtatcactttggtcccttaattaaaatttgatttattttggtcccttaacttc 32564049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 33753224 - 33753315
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || | ||||||||    
T  33753224 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcctttaacttc 33753315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 34028720 - 34028811
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||| ||    |||||||| |||| || |||||||||| || ||||||||||    
T  34028720 aggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtcccttaactaaaattcaatttattttggtcccttaacttc 34028811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 36657888 - 36657797
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| ||||||||||||||||||| ||| |||||| | |||||||||    ||||||||||||| ||  ||||||||| |||||||||||||    
T  36657888 aggcaaaattgtatttttggtcccttaactatttatgcagtatcgctttggtcccttaattaaaattcgatttattttggttccttaacttc 36657797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 52412993 - 52412894
Alignment:
Q  217 ttattaaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||| |||||||||||  |||||||||||| ||| ||||||||| ||||| ||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  52412993 ttattagaaggctaaattacatttttggtcccttaactatttaggtggtatcactttggtcccttaattaaaatttgatttattttggtcccttaacttc 52412894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 311
Target Start/End: Original strand, 10923365 - 10923451
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    |||||||| |||| ||| |||||||||  | |||||||||    
T  10923365 taaattatatttttggtcccttaattatttaggtagtatcgctttggtcccttaagtaaaatttgatttattttgatcccttaactt 10923451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 14775741 - 14775786
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtat 267  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  14775741 aaaaggctaaattgtatttttgttcccttaattatttaggtagtat 14775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 33753605 - 33753512
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||| |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  33753605 aaaaggctaaattgtatttt-ggtcccataactatttaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcccttaacttc 33753512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 34279631 - 34279537
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||  |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  34279631 aaaaggctaaattgcatttttggtcccttaactatttaggtagtatcattttggtcccttaattaaaattcgatttattttggtcccttaacttc 34279537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 37198928 - 37199022
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||||||||||||||||  | ||| |||||||| | |||||||    ||||||||||||| ||| ||||||||| || ||||||||||    
T  37198928 aaaaggctaaattgtatttttggtttcttaactatttaggcaatatcgctttggtcccttaattaaaatttgatttattttggtcccttaacttc 37199022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 50921481 - 50921387
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||  |||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||  ||||||||| || ||||||||||    
T  50921481 aaaaggctaaattacatttttggtcccttaactatttaggtagtatcgctttggtcccttaagtaaaattcgatttattttggtcccttaacttc 50921387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 13944897 - 13944808
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |    ||||||||||| | ||  ||||||||| || |||||||||    
T  13944897 ggctaaattgtatttttggtcccttaatcatttaggtagtatcgttttgatcccttaattagaattcgatttattttggtcccttaactt 13944808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 318
Target Start/End: Complemental strand, 34029108 - 34029011
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||| ||    |||||||| |||| ||  ||||||||| || |||||||||| |||||    
T  34029108 aggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtcccttaactaaaattcgatttattttggtcccttaacttctctttg 34029011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 45305796 - 45305707
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaact 310  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||| ||    ||||||||||||| ||  ||||||||| || ||||||||    
T  45305796 aggctaaattgcatttttggtcccttaactatttaggtagtatcactttggtcccttaattaaaattcgatttattttggtcccttaact 45305707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 50574906 - 50574813
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| || |||| |||||||||||| ||| |||||||||||||||| |    ||||||||||||| ||| ||||||||| || ||||||||||    
T  50574906 aaaggttagattgcatttttggtcccttaactatttaggtagtatcgttttggtcccttaattaaaatttgatttattttggtcccttaacttc 50574813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 10923751 - 10923659
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| |||||||||||| ||| |||||| || ||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  10923751 aaggctaaattgcatttttggtcccttaactatttaagtggtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 10923659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 11787742 - 11787830
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||| ||||||| |||| ||| ||||||||||||||||||    ||||||||||||| ||| | ||||||| || ||||||||||    
T  11787742 ctaaattgaatttttgatcccttaactatttaggtagtatcgctttggtcccttaattaaaatttgaattattttggtcccttaacttc 11787830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 25088015 - 25088062
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  25088015 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 25088062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 46739114 - 46739068
Alignment:
Q  221 taaaaggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  46739114 taaaaggctaaattgtattttt-gtcccctaactatttaggtagtatc 46739068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 50118350 - 50118393
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  50118350 taaattgtatttttggtcccttaactatttaggtagtatcgctt 50118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 6182003 - 6181912
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||||| | ||| |||||| |||||||||||    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  6182003 aggctaaattgtatttttggtctcataactatttatgtagtatcgctttagtcctttaattaaaattcgatttattttggtcccttaacttc 6181912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 31125938 - 31126019
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgcttcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||| ||||||| |||| ||| |||||||||||||||||||   ||||||||| ||  |||||||||  ||||||||||||    
T  31125938 ctaaattgcatttttgatcccttaactatttaggtagtatcgctt---ttaattaaaattcgatttattttgattccttaacttc 31126019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 32564336 - 32564245
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||| ||||  ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| || ||||||||||    
T  32564336 aggctaaattgcatttttagtcctttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 32564245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 51691874 - 51691920
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||    
T  51691874 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctt 51691920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 22584738 - 22584648
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| ||||||||||||| ||| || ||||||||||||| |    ||||||||||||| ||  ||||||||| || ||||||||||    
T  22584738 ggctaaattatatttttggtcccttaactaattaggtagtatcgttttggtcccttaattaaaattcgatttattttggtcccttaacttc 22584648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 24590611 - 24590521
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||| ||    ||| ||||||||| || |||||||||| ||  |||||||||    
T  24590611 ggctaaattatatttttggtcccttaactatttaggtagtatcactttggtcctttaattaaaattcaatttattttggtctcttaacttc 24590521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 34279240 - 34279330
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||| | ||| ||||||||||||| ||||    ||||||||||||| || |||||||||| ||  |||||||||    
T  34279240 ggctaaattgcatttttggtctcttaactatttaggtagtaacgctttggtcccttaattaaaattcaatttattttggtctcttaacttc 34279330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 49291021 - 49291083
Alignment:
Q  254 tatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||||||||    |||||||||||| ||| ||||||||| |||||||||||||    
T  49291021 tatttaggtagtatcgctttggtcccttaattaaaatttgatttatttttgttccttaacttc 49291083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 5117995 - 5118039
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||||    
T  5117995 ctaaattgtatttttggtcccttaactatttaggtaatatcgctt 5118039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 5463507 - 5463414
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| || |||||| ||||| ||| ||||||| ||||||||||    ||| ||||||||| ||| ||||||||| || ||||||||||    
T  5463507 aaaggctaaaatgcatttttagtcccttaactatttagctagtatcgctttggtccgttaattaaaatttgatttattttggtcccttaacttc 5463414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 11788130 - 11788037
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||| ||||||||||   |||||||||| | |||||||||    ||||||||||||| ||  ||||||||| || |||||||||    
T  11788130 aaaaggctaaattgcatttttggtcttttaattatttaagcagtatcgctttggtcccttaattaaaattcgatttattttggtcccttaactt 11788037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 28112720 - 28112797
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgcttc----ccttaattaaagtttaatttatttt 298  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| ||||     ||||||||||| || ||||||||||    
T  28112720 aggctaaattgcatttttggtcccttaactatttaggtagtattgctttggttccttaattaaaattcaatttatttt 28112797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 28970417 - 28970465
Alignment:
Q  224 aaggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||| |||||||||||  ||| |||||||||||||||||||    
T  28970417 aaggctaaattgcatttttggtcctttaactatttaggtagtatcgctt 28970465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 35986229 - 35986322
Alignment:
Q  223 aaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||| |||||||| ||||||| |||| ||| ||||||||||||||||||    ||||||||||||| ||  ||||||||| ||  |||||||||    
T  35986229 aaagcctaaattgcatttttgttcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttggtctcttaacttc 35986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 36884718 - 36884815
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttccct 315  Q
    |||||| ||||||||||||||| |||  ||| ||||||||||||||||||    || |||||||||| ||  ||||||||| ||  ||||||||||||    
T  36884718 aaaaggttaaattgtatttttgttcctttaactatttaggtagtatcgctttggtctcttaattaaaattcgatttattttggtctcttaacttccct 36884815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 272
Target Start/End: Complemental strand, 2125577 - 2125542
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||| |||||||||||||||||||||||    
T  2125577 atttttggtcccttaattatttaggtagtatcgctt 2125542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 14118529 - 14118572
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  14118529 aggctaaattgcatttttggtcccttaactatttaggtagtatc 14118572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 19886297 - 19886258
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  19886297 taaattgtatttttggtcctttaattatttaggtagtatc 19886258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 272
Target Start/End: Complemental strand, 30293395 - 30293352
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||    
T  30293395 taaattgcatttttggtcccttaactatttaggtagtatcgctt 30293352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 272
Target Start/End: Original strand, 30792439 - 30792486
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||| |||||||||||||||| |||||||||| | ||||||    
T  30792439 aggctaaattgcatttttggtcccctaactatttaggtactgtcgctt 30792486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 10654404 - 10654325
Alignment:
Q  237 atttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||| ||| ||||||||||||||||||    |||||||| |||| ||  ||||||||| || ||||||||||    
T  10654404 atttttggtcccttaactatttaggtagtatcgctttggtcccttaactaaaattcgatttattttggtcccttaacttc 10654325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 21385323 - 21385232
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| | ||||  |||| ||| |||||| ||||||||||||    |||||||||||| |||||||||||||  | ||||||||||    
T  21385323 aggctaaattgcacttttaatcccttaactatttaagtagtatcgctttggtcccttaattaaaatttaatttattttgatcccttaacttc 21385232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 30611223 - 30611310
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||| |||||||||||| ||| ||||||| || |||| |||    |||||||||||| ||  |||||||||||| ||||||||||    
T  30611223 taaattgcatttttggtcccttaactatttagatattatcactttgatcccttaattaaaattcgatttattttagtcccttaacttc 30611310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 42607887 - 42607845
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||    
T  42607887 gctaaattgtatttttgatcccttaattatttagatagtatcg 42607845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 4550987 - 4550897
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    ||||||||||| |||||||||| | ||| ||||||  ||||||||||    ||||||||||||| ||| ||||||||| ||  ||||||||    
T  4550987 aggctaaattgcatttttggtctcttaactatttaattagtatcgctttggtcccttaattaaaatttgatttattttggtatcttaactt 4550897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 18794080 - 18793987
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtat--cgctt----cccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||| |||||||  |||||    |||||||||||| ||  ||||||||| || ||||||||||    
T  18794080 aggctaaattgcatttttggtcccttaactatttaagtagtatatcgctttggtcccttaattaaaattcgatttattttggtcccttaacttc 18793987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 30611606 - 30611561
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    ||||||||||||||||| |||| ||| ||||||||| |||||||||    
T  30611606 gctaaattgtatttttgatcccttaactatttaggttgtatcgctt 30611561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 50921061 - 50921102
Alignment:
Q  227 gctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    ||||||||| |||||||||||| ||| |||||||||||||||    
T  50921061 gctaaattgcatttttggtcccttaactatttaggtagtatc 50921102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 51810515 - 51810478
Alignment:
Q  235 gtatttttggtcccctaattatttaggtagtatcgctt 272  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  51810515 gtatttttggtcccttaactatttaggtagtatcgctt 51810478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 4045102 - 4045175
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttatttt 298  Q
    |||||||||||||| | ||| ||| |||||||||||||||| |    ||||||||||||| || ||||||||||    
T  4045102 taaattgtatttttagccccttaactatttaggtagtatcgttttggtcccttaattaaaattcaatttatttt 4045175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 311
Target Start/End: Complemental strand, 4045489 - 4045396
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaactt 311  Q
    |||||||||||||| || ||||||||| ||| |||||| |||||||| ||    || |||||||||| ||  |||||||||||| | |||||||    
T  4045489 aaaaggctaaattgcatgtttggtcccttaactatttaagtagtatcactttggtctcttaattaaaattcgatttattttagtcctttaactt 4045396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 25088398 - 25088358
Alignment:
Q  229 taaattgtatttttggtcccctaattatttaggtagtatcg 269  Q
    |||||| ||||||||||||| ||| ||||||||||||||||    
T  25088398 taaattatatttttggtcccttaactatttaggtagtatcg 25088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 11604 - 11510
Alignment:
Q  222 aaaaggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||||||| ||||||  |||| ||| ||||||||||||||||||    ||||||||||||| || |||||||||| || ||||||||||    
T  11604 aaaaggctaaattgcattttttatcccttaactatttaggtagtatcgctttggtcccttaattaaaattcaatttattttggtcccttaacttc 11510  T

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Target: scaffold0809 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 4705 - 4614
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    ||||||||||||| ||  |||||||||  | ||||||||||    
T  4705 aggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaattaaaattcgatttattttgatcccttaacttc 4614  T

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Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 11487 - 11578
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||||||||| |||||||||||| ||| |||||||  |||||||||    ||||||||||||| ||  |||||||||||| ||||||||||    
T  11487 aggctaaattgcatttttggtcccttaactatttagaaagtatcgctttggtcccttaattaaaattcgatttattttagtcccttaacttc 11578  T

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Target: scaffold0168; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 11873 - 11783
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    ||| ||||||||| ||  ||||||||| || ||||||||||    
T  11873 ggctaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcctttaattaaaattcgatttattttggtcccttaacttc 11783  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 66123 - 66029
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgcttc----ccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||  |||||||||| | ||| |||||||||||||||| ||     ||||||||||| || ||||||||||||| |||||||||| |||||    
T  66123 ctaaattacatttttggtcgcttaactatttaggtagtatcgttttagttccttaattaaaattcaatttattttagtcccttaacttctctttg 66029  T

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Target: scaffold0045; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 318
Target Start/End: Complemental strand, 73455 - 73361
Alignment:
Q  228 ctaaattgtatttttggtcccctaattatttaggtagtatcgcttc----ccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||  |||||||||| | ||| |||||||||||||||| ||     ||||||||||| || ||||||||||||| |||||||||| |||||    
T  73455 ctaaattacatttttggtcgcttaactatttaggtagtatcgttttagttccttaattaaaattcaatttattttagtcccttaacttctctttg 73361  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 45222 - 45126
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgctt----cccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    |||||||||| |||||| ||||| ||| |||||||||| ||||||||    ||||||||||||  || ||||||| | || |||||||||| |||||    
T  45222 ggctaaattgcatttttagtcccttaactatttaggtattatcgctttgctcccttaattaaaaattgatttattgtggtcccttaacttctctttg 45126  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 177452 - 177409
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatc 268  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||    
T  177452 aggctaaattgcatttttggtcccttaattatttaggtattatc 177409  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 90805 - 90895
Alignment:
Q  226 ggctaaattgtatttttggtcccctaattatttaggtagtatcgct----tcccttaattaaagtttaatttattttagttccttaacttc 312  Q
    ||||| |||| |||||| ||||| ||| ||||||||||||||||||    |||||||||| || ||| ||||||||| ||  |||||||||    
T  90805 ggctacattgcatttttagtcccttaactatttaggtagtatcgcttttgtcccttaattgaaatttgatttattttggtaacttaacttc 90895  T

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Target: scaffold1436 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 1475 - 1572
Alignment:
Q  225 aggctaaattgtatttttggtcccctaattatttaggtagtatcgc----ttcccttaattaaagtttaatttattttagttccttaacttccctttg 318  Q
    ||||||| ||| |||||| ||| | ||| |||||||||||||||||     ||||||||||||| ||| |||||||||  | |||||||||| |||||    
T  1475 aggctaagttgcattttttgtcacttaactatttaggtagtatcgcattggtcccttaattaaaatttgatttattttgatcccttaacttctctttg 1572  T

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