View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12039_low_46 (Length: 234)

Name: NF12039_low_46
Description: NF12039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12039_low_46
NF12039_low_46
[»] chr4 (19 HSPs)
chr4 (7-219)||(3270543-3270755)
chr4 (14-219)||(3268331-3268536)
chr4 (15-219)||(12885277-12885481)
chr4 (16-219)||(10985713-10985915)
chr4 (14-216)||(12217561-12217757)
chr4 (15-219)||(21332543-21332746)
chr4 (17-211)||(49402697-49402893)
chr4 (15-216)||(25239695-25239895)
chr4 (12-216)||(45313147-45313349)
chr4 (54-216)||(9901739-9901901)
chr4 (15-184)||(17282489-17282658)
chr4 (16-139)||(16396266-16396389)
chr4 (22-189)||(13861340-13861507)
chr4 (25-195)||(26780824-26780994)
chr4 (53-211)||(8082050-8082207)
chr4 (110-206)||(28891919-28892014)
chr4 (73-194)||(34845514-34845635)
chr4 (98-190)||(15455466-15455558)
chr4 (151-216)||(18284661-18284724)
[»] chr7 (16 HSPs)
chr7 (18-211)||(30770189-30770381)
chr7 (14-207)||(20093545-20093738)
chr7 (16-219)||(21802447-21802650)
chr7 (16-219)||(9548968-9549171)
chr7 (16-216)||(29164849-29165049)
chr7 (16-206)||(7595360-7595549)
chr7 (17-204)||(2249992-2250179)
chr7 (16-189)||(47295681-47295854)
chr7 (103-218)||(22703894-22704009)
chr7 (15-219)||(22705602-22705800)
chr7 (15-184)||(21592876-21593045)
chr7 (15-189)||(18153155-18153329)
chr7 (22-166)||(38612607-38612751)
chr7 (15-178)||(18185662-18185825)
chr7 (67-210)||(28794078-28794220)
chr7 (18-150)||(30764982-30765114)
[»] scaffold0034 (1 HSPs)
scaffold0034 (15-219)||(47414-47618)
[»] chr5 (17 HSPs)
chr5 (15-219)||(5931187-5931391)
chr5 (16-216)||(28068023-28068223)
chr5 (23-216)||(22922645-22922838)
chr5 (16-210)||(42792487-42792681)
chr5 (16-204)||(15620191-15620379)
chr5 (16-216)||(41037645-41037854)
chr5 (53-216)||(38608267-38608430)
chr5 (61-216)||(22922086-22922241)
chr5 (15-219)||(8244508-8244717)
chr5 (15-189)||(23495375-23495549)
chr5 (15-189)||(36712648-36712822)
chr5 (15-182)||(20899595-20899762)
chr5 (15-189)||(5590696-5590870)
chr5 (17-144)||(19329925-19330052)
chr5 (15-176)||(33622489-33622653)
chr5 (15-95)||(22510102-22510182)
chr5 (175-216)||(19330051-19330092)
[»] chr2 (12 HSPs)
chr2 (15-219)||(3770257-3770461)
chr2 (18-219)||(41266197-41266399)
chr2 (18-219)||(23755820-23756021)
chr2 (16-219)||(25133933-25134136)
chr2 (23-216)||(42534129-42534322)
chr2 (16-216)||(23929797-23929997)
chr2 (17-209)||(19092728-19092920)
chr2 (23-216)||(29568315-29568507)
chr2 (16-216)||(3105204-3105404)
chr2 (53-165)||(26155019-26155131)
chr2 (15-189)||(27347196-27347370)
chr2 (137-219)||(26159154-26159236)
[»] scaffold0002 (2 HSPs)
scaffold0002 (16-216)||(391459-391659)
scaffold0002 (16-211)||(380767-380961)
[»] chr8 (18 HSPs)
chr8 (15-219)||(2085741-2085945)
chr8 (15-219)||(18040480-18040683)
chr8 (14-216)||(7999650-7999850)
chr8 (15-216)||(18574016-18574220)
chr8 (16-216)||(24033762-24033965)
chr8 (15-216)||(32009012-32009213)
chr8 (16-216)||(7454666-7454866)
chr8 (28-210)||(10532801-10532983)
chr8 (22-211)||(11709373-11709562)
chr8 (53-190)||(41280846-41280983)
chr8 (17-211)||(24060563-24060757)
chr8 (24-189)||(25820743-25820908)
chr8 (114-211)||(33273604-33273701)
chr8 (16-153)||(22609492-22609631)
chr8 (169-219)||(17775705-17775755)
chr8 (134-189)||(1788677-1788732)
chr8 (17-92)||(33273523-33273598)
chr8 (73-137)||(22282161-22282225)
[»] chr6 (27 HSPs)
chr6 (16-216)||(23574394-23574594)
chr6 (17-216)||(19860052-19860251)
chr6 (16-209)||(18736007-18736200)
chr6 (15-219)||(4409193-4409397)
chr6 (15-217)||(7968493-7968695)
chr6 (17-216)||(14910605-14910805)
chr6 (15-219)||(8306061-8306261)
chr6 (17-216)||(12738495-12738694)
chr6 (15-219)||(15119719-15119921)
chr6 (23-211)||(18014464-18014652)
chr6 (16-216)||(29482591-29482791)
chr6 (16-211)||(18728926-18729121)
chr6 (15-189)||(29095016-29095190)
chr6 (15-216)||(24438560-24438760)
chr6 (16-216)||(18258594-18258794)
chr6 (53-152)||(23524128-23524227)
chr6 (53-184)||(15349665-15349796)
chr6 (101-219)||(18043337-18043455)
chr6 (53-211)||(15319015-15319172)
chr6 (53-184)||(15369661-15369792)
chr6 (22-158)||(3876376-3876512)
chr6 (21-139)||(17757022-17757140)
chr6 (75-210)||(14480001-14480135)
chr6 (15-94)||(21508637-21508716)
chr6 (75-158)||(7099285-7099368)
chr6 (75-158)||(8795262-8795345)
chr6 (77-184)||(6109473-6109583)
[»] scaffold0989 (1 HSPs)
scaffold0989 (15-219)||(1520-1724)
[»] chr1 (10 HSPs)
chr1 (15-219)||(19442109-19442313)
chr1 (15-219)||(19967417-19967621)
chr1 (16-210)||(9858973-9859171)
chr1 (22-207)||(38621812-38621997)
chr1 (60-216)||(8990805-8990961)
chr1 (53-209)||(8995475-8995630)
chr1 (53-189)||(21817775-21817911)
chr1 (54-216)||(24973924-24974085)
chr1 (75-189)||(22186045-22186159)
chr1 (112-189)||(21815619-21815696)
[»] scaffold0058 (2 HSPs)
scaffold0058 (15-211)||(1613-1810)
scaffold0058 (64-216)||(15365-15517)
[»] scaffold0280 (1 HSPs)
scaffold0280 (16-211)||(1040-1235)
[»] scaffold0042 (2 HSPs)
scaffold0042 (7-216)||(74845-75054)
scaffold0042 (7-200)||(68689-68882)
[»] scaffold0150 (1 HSPs)
scaffold0150 (15-211)||(30056-30252)
[»] scaffold0170 (1 HSPs)
scaffold0170 (16-216)||(16315-16516)
[»] chr3 (11 HSPs)
chr3 (16-216)||(22915052-22915252)
chr3 (22-209)||(16853014-16853201)
chr3 (15-145)||(19790346-19790476)
chr3 (76-216)||(16914706-16914846)
chr3 (135-219)||(1998003-1998087)
chr3 (141-216)||(19773386-19773462)
chr3 (16-210)||(3559119-3559311)
chr3 (118-211)||(22006498-22006590)
chr3 (118-211)||(22014015-22014107)
chr3 (16-140)||(44635823-44635947)
chr3 (114-158)||(36639652-36639696)
[»] scaffold0008 (2 HSPs)
scaffold0008 (17-216)||(242673-242872)
scaffold0008 (17-216)||(253313-253512)
[»] scaffold0083 (1 HSPs)
scaffold0083 (22-216)||(4202-4396)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-216)||(151299-151490)
[»] scaffold0013 (1 HSPs)
scaffold0013 (24-216)||(37234-37425)
[»] scaffold0299 (1 HSPs)
scaffold0299 (98-219)||(19147-19268)
[»] scaffold0192 (1 HSPs)
scaffold0192 (53-216)||(12323-12486)
[»] scaffold0111 (1 HSPs)
scaffold0111 (17-216)||(2831-3029)
[»] scaffold0084 (1 HSPs)
scaffold0084 (16-183)||(54603-54770)
[»] scaffold0362 (1 HSPs)
scaffold0362 (15-189)||(7349-7522)
[»] scaffold0265 (2 HSPs)
scaffold0265 (53-189)||(14898-15034)
scaffold0265 (112-189)||(17113-17190)
[»] scaffold0096 (1 HSPs)
scaffold0096 (50-181)||(10906-11037)
[»] scaffold0025 (1 HSPs)
scaffold0025 (78-216)||(86424-86562)
[»] scaffold0011 (1 HSPs)
scaffold0011 (74-184)||(20342-20452)
[»] scaffold0063 (2 HSPs)
scaffold0063 (67-210)||(36830-36972)
scaffold0063 (115-210)||(49325-49419)
[»] scaffold0483 (1 HSPs)
scaffold0483 (16-107)||(9243-9335)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 3270755 - 3270543
Alignment:
Q  7 ggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcca 106  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| | |||||||||||| |||||||||  ||||| |||    
T  3270755 ggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccacca 3270656  T
Q  107 gagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3270655 gagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtaggatctatctctccctctaaacc 3270556  T
Q  207 ctcacgctctctg 219  Q
    ||||| |||||||    
T  3270555 ctcactctctctg 3270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 3268536 - 3268331
Alignment:
Q  14 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 113  Q
    ||||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| ||||||||   ||||||||||||||||    
T  3268536 cagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgattacgtaaccgccagagccag 3268437  T
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgc 213  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||| |    
T  3268436 gtgtgtcattacaatggctctgcagccctccacctctataaataggggactcacggaagtctccaaggtagaatctatctctccctctaaaccctcactc 3268337  T
Q  214 tctctg 219  Q
    ||||||    
T  3268336 tctctg 3268331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 12885481 - 12885277
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| |||||  | || |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||    
T  12885481 agagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagg 12885382  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||| |||||||||| ||||||||||||||| ||    
T  12885381 tgtgccattacaatggctctgcagccctccacctttataaataggggactcacaacagtccccaaggtagaatctatctcttcctctaaaccctcaccct 12885282  T
Q  215 ctctg 219  Q
    |||||    
T  12885281 ctctg 12885277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 10985713 - 10985915
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||    
T  10985713 gagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgcgagagccaggt 10985812  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||| |||| |||| |||||||||| |||    
T  10985813 gtgccattacaacggctctgcagccatccacctctataaataggggactcacggcagt-cccaaggtagaatctacctcttcctccaaaccctcactctc 10985911  T
Q  216 tctg 219  Q
    ||||    
T  10985912 tctg 10985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 12217757 - 12217561
Alignment:
Q  14 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 113  Q
    ||||||||||||||||||||| |||| ||||| || || ||||| |||||||||||| |||||||||||||| | |||||||  ||||||||||||||||    
T  12217757 cagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacacttcctacgatttcgtaaccgccagagccag 12217658  T
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgc 213  Q
    ||      ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |    
T  12217657 gt------ttacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaaggtagaatctatctctccctctaaacccgcactc 12217564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 21332543 - 21332746
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| ||||| |||||| ||||||||| | ||||||||| |||| ||| |||||  ||| |||||||||||||    
T  21332543 agagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggttatacttcccatgatttcgtaagcgccagagccagg 21332642  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||||||  |||||  ||||||||| |||||||||| |||| |||||||||| ||    
T  21332643 tgtgccactacaacggctctgcagccctccacctctgtaaataggggactcaaagcagtttccaaggtagaatctatctcttcctc-aaaccctcactct 21332741  T
Q  215 ctctg 219  Q
    |||||    
T  21332742 ctctg 21332746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 49402893 - 49402697
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcacta--catgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||| |||||||||| ||||||| ||||| ||   || ||| ||||||||| |||| |||||||||||||||||||||| |  |||||||||||||| ||    
T  49402893 agaccggttcaaacggactacaacgtctctctctgcacgtttccgcaataatctctatggcggttacactttccacgatctcgtaaccgccagagcctgg 49402794  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||  ||||||||||| |||| || ||| ||||||||| | |||||||    
T  49402793 tgtgccattacaacggctctgcagccctccacctctatatataggggactcatagcagtccccaaagtagaatatatatctccctcttatccctcac 49402697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 25239895 - 25239695
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | || |||||||||||||||||   ||||||||||||| |||| ||||  |||||| |||||  |||    
T  25239895 agagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaagg 25239796  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| |||| ||| || ||| |||||||||| ||    
T  25239795 tgtgccattacaacggctctgcagccctccacctctataaataggggactaaatgcagtccccaaggtagaatctttctttctctc-aaaccctcactct 25239697  T
Q  215 ct 216  Q
    ||    
T  25239696 ct 25239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 216
Target Start/End: Complemental strand, 45313349 - 45313147
Alignment:
Q  12 agcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagcc 111  Q
    |||| ||||||||||||||||||||||| ||||| || || |||||| |||||| |||| |||||||||||||| |||||||||  ||||||||||||||    
T  45313349 agcaaagactggttcaaacgaactacaacgtctctctgcacgttccc-caataatctctctggcggttacacttcccacgatttcgtaaccgccagagcc 45313251  T
Q  112 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
     |||||||||||||||||| | |||| ||||| ||||||||| | || | |||||   ||||||||||||||| ||||| ||||  | ||||||||||||    
T  45313250 tggtgtgccattacaacggatttgcaaccctctacctctatata-agggaactcataacagtccccaaggtagaatctaactctttcactaaaccctcac 45313152  T
Q  212 gctct 216  Q
     ||||    
T  45313151 tctct 45313147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 9901739 - 9901901
Alignment:
Q  54 ttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctata 153  Q
    |||||||||||| |||| | |||||||||| | |||||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9901739 ttcccgcaataatctctctagcggttacacgtcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcaaccctccacctctata 9901838  T
Q  154 aatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
     |||| ||||||   ||||||| |||||||| | | || ||||||||| ||||||||| ||||    
T  9901839 tataggggactcttagcagtcctcaaggtagaaccgatatctccctcttaaccctcactctct 9901901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 17282489 - 17282658
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||| |||||||  ||| |||||  | || ||||||||||||||| |    |||||||||||| |||||| ||  |||||| |||||  |||    
T  17282489 agagactggttctaacgaaccccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcgtaaccgtcagagtaagg 17282588  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtag 184  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  17282589 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 17282658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 16396266 - 16396389
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||| ||||| |||| ||||| ||||| ||||||||||||||| || |||||||||||||| ||| ||||| |||| |||||||| |||||    
T  16396266 gagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacacttcccatgatttcctaatcgccagagtcaggt 16396365  T
Q  116 gtgccattacaacggctctgcagc 139  Q
    |||||| |||||||||||||||||    
T  16396366 gtgccactacaacggctctgcagc 16396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 13861507 - 13861340
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    |||||||||||||  ||| |||||  | || |||||||||||||||||   ||| ||||||||| |||||||||  |||| |  ||||  ||||||||||    
T  13861507 ggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttcccacgatttcgtaactgttagagtaaggtgtgcca 13861408  T
Q  122 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||  |||||||||||||||| ||||    
T  13861407 ttacaacggctttgcagccctccacctctataaatagggaactcaatgcagtccccaaggtagaatct 13861340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 195
Target Start/End: Original strand, 26780824 - 26780994
Alignment:
Q  25 tcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatta 124  Q
    |||||||||| |||| || || || || ||||||||||||| |||| |||||||||||||| ||||| |||  ||||| |||||| | |||||| |||||    
T  26780824 tcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttacacttcccacgttttcgtaaccaccagagtctggtgtgtcatta 26780923  T
Q  125 caacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctct 195  Q
    |||||||||||||||||||||||||| |  |||| ||| |||   ||||||||||||||| ||||| ||||    
T  26780924 caacggctctgcagccctccacctctctgtataggggagtcataacagtccccaaggtagaatctaactct 26780994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 211
Target Start/End: Complemental strand, 8082207 - 8082050
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    ||||||||||| |  ||| ||||||||||||||||||||||||  |||| |   || |||||||||||||||||| |||||||||| |||||||||||||    
T  8082207 gttcccgcaattatttctctggcggttacactttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctat 8082108  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    | |||| ||||||   ||||||||||| |||| ||||| ||||  ||||||||||||||    
T  8082107 atataggggactcttagcagtccccaatgtagaatcta-ctctttctctaaaccctcac 8082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 28892014 - 28891919
Alignment:
Q  110 ccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 206  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| |||| ||||||     |||||||||||||| |||||| ||| ||||||||||    
T  28892014 ccagatgtgccattacaacggctatgcagctctccacctctatatataggggactcttaagagtccccaaggtagaatctat-tcttcctctaaacc 28891919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 34845514 - 34845635
Alignment:
Q  73 ggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcag 172  Q
    ||||||||||||| |||||||||  |||||| ||||  || |||||||||||||||| |||||||  |  ||||||||||| | || || |||   ||||    
T  34845514 ggcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgccattacaacgactctgcattcacccacctctatataaagggggctcctcgcag 34845613  T
Q  173 tccccaaggtaggatctatctc 194  Q
    |||||||||||| |||| ||||    
T  34845614 tccccaaggtagaatctctctc 34845635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 15455558 - 15455466
Alignment:
Q  98 taaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatcta 190  Q
    ||||||||| |  |||||||||| | |||||| || |||| ||||||||||||||| ||| | |||||   |||||||||||||||| |||||    
T  15455558 taaccgccaaacacaggtgtgccttcacaacgactttgcatccctccacctctatatatataagactcttagcagtccccaaggtagaatcta 15455466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 18284661 - 18284724
Alignment:
Q  151 ataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||| |||||||  |||||||||||||||| |||  ||||| ||||||||||||||| ||||    
T  18284661 ataaataggggactcaatgcagtccccaaggtagaatc--tctcttcctctaaaccctcactctct 18284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 30770189 - 30770381
Alignment:
Q  18 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 117  Q
    ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  30770189 gactggttcaaacgaac-acaacgtctctctacacgttcccgcaataaactctttggcagttacactttccacgatttcgtaaccgccagagccaggtgt 30770287  T
Q  118 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  30770288 gccattacaacggctctgcagcactccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcac 30770381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 20093738 - 20093545
Alignment:
Q  14 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 113  Q
    ||||||||||||||||||||| |||| ||||| || ||  |||||||||||| |||||||| |||||||||| |||||||||  ||||||| || |||||    
T  20093738 cagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacacttcccacgatttcgtaaccgctagggccag 20093639  T
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  20093638 gtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtagaaactatctctccctccaaaccc 20093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 21802650 - 21802447
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||||||||| |||||| |||| ||||| || || |||| ||||||||||||| | || ||||||||| | |||||||  ||||| ||||||||||||    
T  21802650 gagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttcctacgatttcgtaaccaccagagccaggt 21802551  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  21802550 gtgccattacaacggctctgtagccctcaacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 21802451  T
Q  216 tctg 219  Q
    ||||    
T  21802450 tctg 21802447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 9548968 - 9549171
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||  |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||    
T  9548968 gagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggt 9549067  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||  |||||||||||||||||||||||||| |||||| || |||||||  | |||||||||||||  |||||||||| ||||||||||||||| |||    
T  9549068 gtgcctctacaacggctctgcagccctccacctttataaaaaggggactcaaagtagtccccaaggtaaaatctatctcttcctctaaaccctcactctc 9549167  T
Q  216 tctg 219  Q
    ||||    
T  9549168 tctg 9549171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 29165049 - 29164849
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||| ||||| || || |||||||||||||||||| | || ||||||||| |||||||||  ||||  | |||| |||||    
T  29165049 gagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacacttcccacgatttcgtaacttctagagtcaggt 29164950  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    ||| ||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  29164949 gtgtcattacaacggctctgcagccgtccacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 29164850  T
Q  216 t 216  Q
    |    
T  29164849 t 29164849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 7595549 - 7595360
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| ||||||||||||| |||||||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||  |||| |||||||    
T  7595549 gagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaacatccagcgccaggt 7595450  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 206  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||| ||| | |||  |||||||||| |||||||||| ||| ||||||    
T  7595449 gtgctattacaacggctttgcagccctccacctctataaataggggaatcatgacag-acccaaggtagaatctatctcttcctttaaacc 7595360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 2249992 - 2250179
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||||||||||||||||| |||| ||||| || || |||||||||||||  ||| | ||||||||| || |||||||||  ||||||||| |||| ||||    
T  2249992 agactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaattcccacgattttgtaaccgccaaagcctggtg 2250091  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaa 204  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||  |||  |||||| |||| |||||||||| ||||||||    
T  2250092 tgccattacaacggctctgcaaccctccacctctatatataggggactcatagcaaaccccaatgtagaatctatctcttcctctaaa 2250179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 47295681 - 47295854
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||||||||||||||||  ||| ||||| || ||  ||||||||||||||||    ||| |||||||| |||||||||  |||||| |||||  ||||    
T  47295681 gagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgtaaccgtcagagtaaggt 47295780  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  47295781 gtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 47295854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 22704009 - 22703894
Alignment:
Q  103 gccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctcta 202  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||  ||||||    
T  22704009 gccagaaccaggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaaggtagaatctatctcgtcctcta 22703910  T
Q  203 aaccctcacgctctct 218  Q
    ||||||||| ||||||    
T  22703909 aaccctcactctctct 22703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 22705800 - 22705602
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||| |||||||||||| |||| || || || || ||||| |||||||| ||| |  ||||||||||| ||| |||||  |||||||||||||||||    
T  22705800 agagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggttacacttcccatgatttcgtaaccgccagagccagg 22705701  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    ||||||||||||| |||||||||| ||||||||||||||||||  ||||||||        ||||||||| |||||||||| ||||||||||||||| ||    
T  22705700 tgtgccattacaatggctctgcagtcctccacctctataaatacgggactcac------aaccaaggtagaatctatctcttcctctaaaccctcactct 22705607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 21592876 - 21593045
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | || ||||||| ||||| ||    | ||||||||||| |||||||||  |||||| |||||  |||    
T  21592876 agagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttacacttcccacgattttgtaaccgtcagagtaagg 21592975  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtag 184  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  21592976 tgtgccattacaacggctcagcagccctccacctctataaataggggactcaatgcagtccccaaggtag 21593045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 18153329 - 18153155
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | || |||||| ||||||||||   ||||||||||||| |||| ||||  |||||| |||||  ||     
T  18153329 agagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggttacacttcccaccatttcgtaaccgtcagagtaagc 18153230  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||||  ||| |||||||||||| ||||    
T  18153229 tgtgccattacaacgactcggcagccctccacctctataaataggggactcaatgcattccccaaggtagaatct 18153155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 38612751 - 38612607
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    ||||||||||||| |||| ||| | || || |||||| |||||| |||| |||| ||||||||| |||||||||  |||||||||||||| ||||| |||    
T  38612751 ggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacacttcccacgattttgtaaccgccagagcctggtgtacca 38612652  T
Q  122 ttacaacggctctgcagccctccacctctataaatagaggactca 166  Q
    |||||||||||||||||  ||||||||||||| ||| | ||||||    
T  38612651 ttacaacggctctgcagatctccacctctatatatatatgactca 38612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 18185825 - 18185662
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | ||||||||||||||||||||    |||||||||||| || ||||||  |||||| |||||  |||    
T  18185825 agagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcagagtaagg 18185726  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcccca 178  Q
    |||||| ||| ||||||||||||||||||||| | ||| ||||| |||||||  ||||||||||    
T  18185725 tgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtcccca 18185662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 28794078 - 28794220
Alignment:
Q  67 ctctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactca 166  Q
    |||| |||||||||||||| |||||||||  |||||| ||||  || ||||||||||||||||||| |||||||   ||||| |||| |||| ||||||     
T  28794078 ctctctggcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactct 28794177  T
Q  167 cggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
       ||||||||||||||| |||||| ||||||||||||||||||    
T  28794178 taacagtccccaaggtagaatctat-tctccctctaaaccctca 28794220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 30764982 - 30765114
Alignment:
Q  18 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 117  Q
    ||||||||||| ||||| ||||||||||  | ||  |||||||||| |  ||| |||||||||||||| |||||||||  || ||| | || | ||||||    
T  30764982 gactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggttacacttcccacgatttcgtacccgtcggacctaggtgt 30765081  T
Q  118 gccattacaacggctctgcagccctccacctct 150  Q
    |||| |||||| |||||||||||||||||||||    
T  30765082 gccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 47414 - 47618
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||| ||||  ||||||||||||||| |    
T  47414 agagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaattttgtaaccgccagagccaag 47513  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  47514 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 47613  T
Q  215 ctctg 219  Q
    |||||    
T  47614 ctctg 47618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 5931391 - 5931187
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| |||||  ||||||||||||||||| |||||||| ||||| |||||||||  ||||||||||| |||||    
T  5931391 agagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcacttcccacgatttcataaccgccagaaccagg 5931292  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||| ||    
T  5931291 tgtgtcattacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaagatagaatctatctctccctctaaaccctcactct 5931192  T
Q  215 ctctg 219  Q
    |||||    
T  5931191 ctctg 5931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 28068023 - 28068223
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||| |  ||| ||||| || || ||||| ||||||||||||  ||||||||||||| |||||||||  ||||||||||||||||||    
T  28068023 gagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacacttcccacgatttcgtaaccgccagagccaggt 28068122  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||| |||| ||||| ||||||||||||||| |||    
T  28068123 gtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctctctcttcctctaaaccctcactctc 28068222  T
Q  216 t 216  Q
    |    
T  28068223 t 28068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 22922645 - 22922838
Alignment:
Q  23 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 122  Q
    |||||||||||| ||||  |||| ||  ||||| | |||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||||| ||     
T  22922645 gttcaaacgaaccacaacctctctctgtatgtttcagcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcac 22922744  T
Q  123 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||||||||||||| |||||||||||||||||||||| |||||||   || |||||||||||| |||||||||| ||||||||||||||| ||||    
T  22922745 tacaacggctctgtagccctccacctctataaataggggactcataacaatccccaaggtagaatctatctcttcctctaaaccctcactctct 22922838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 42792681 - 42792487
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| |||||||||||   |||| || || || || |||||||||||||||||| | |||||||||||| |||||||||  ||||||||||||||||||    
T  42792681 gagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggt 42792582  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
    |||||| |||||| ||||||||||||||||||||||||| ||| |||||||   || |||||||||||| ||||||||| | |||||||||||||    
T  42792581 gtgccactacaactgctctgcagccctccacctctataactaggggactcataacaatccccaaggtagaatctatctccctctctaaaccctca 42792487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 15620191 - 15620379
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| ||||||||||| | |||| ||||| || || |||||| ||||||||||| |||||||||||||| |||| ||||  |||||| |||||||| ||    
T  15620191 gagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacaatttcgtaaccgtcagagccaagt 15620290  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaa 204  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||| ||||    
T  15620291 gtgccattacaacagctctacagcccttcacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctataaa 15620379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 41037645 - 41037854
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||||||||||| |||| | ||  |||  || || |||| ||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||    
T  41037645 gagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggt 41037744  T
Q  116 gtgccattacaacggctctgcagccctccacc---------tctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 206  Q
    |||||||||||||||||| |||||||||||||         ||||||||||| |||||||  |||||||||||||||| || ||||||| ||||||||||    
T  41037745 gtgccattacaacggctccgcagccctccacctctataaattctataaataggggactcatagcagtccccaaggtagaatatatctcttcctctaaacc 41037844  T
Q  207 ctcacgctct 216  Q
    ||||| ||||    
T  41037845 ctcactctct 41037854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 38608430 - 38608267
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||   |||||||||||| || |||||||||||||    
T  38608430 gttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacctctat 38608331  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatctatctctccctct-aaaccctcacgctct 216  Q
    |||||| |||||||  |||||||| ||||||| |||| | ||||||||| |||||||||| ||||    
T  38608330 aaataggggactcaatgcagtccctaaggtagaatct-tttctccctctaaaaccctcactctct 38608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 22922086 - 22922241
Alignment:
Q  61 aataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagag 160  Q
    |||||||| | |||||||||||||| |||||||||  ||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||||| |    
T  22922086 aataaactttctggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcactacaacggctctgtagccctccacctctataaataggg 22922185  T
Q  161 gactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||||||   |||| |||||||||| |||||||||| ||||||||||||||| ||||    
T  22922186 gactcataacagttcccaaggtagaatctatctcttcctctaaaccctcactctct 22922241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 8244717 - 8244508
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| |||||  | || |||||| ||||||||||| | ||| ||||||||||||||||||  ||||||||||||||| |    
T  8244717 agagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgattacactttccacgatttcgtaaccgccagagccatg 8244618  T
Q  115 t------gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccct 208  Q
    |      ||||||| ||| || |||||||||||||||||||||||||||  ||||||||  |||||| |||||||| |||||||||| |||| |||||||    
T  8244617 taatgatgtgccatcaca-cgactctgcagccctccacctctataaataagggactcacatcagtcctcaaggtagaatctatctcttcctcaaaaccct 8244519  T
Q  209 cacgctctctg 219  Q
    ||| |||||||    
T  8244518 cactctctctg 8244508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 23495549 - 23495375
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||| |||||||||||||  ||| |||||  | || |||||||||||||||||   | ||||||||||| |||||||||  |||||| |||||  |||    
T  23495549 agagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggttacacttcccacgatttcgtaaccgtcagagttagg 23495450  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| |||| ||||    
T  23495449 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaatgtagaatct 23495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 36712648 - 36712822
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||| ||||||||||||  ||| |||||  | || |||| ||||||||| ||   || ||||||||||||||||||||  |||||| |||||  |||    
T  36712648 agagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacactttccacgatttcgtaaccgtcagagttagg 36712747  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  36712748 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 36712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 20899595 - 20899762
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | || |||||||||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||    
T  20899595 agagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttagg 20899694  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggt 182  Q
    |||||||||||||||  ||||||||||||||||| ||||||||| |||||||  ||||||||||||||    
T  20899695 tgtgccattacaacgaatctgcagccctccacctttataaataggggactcaatgcagtccccaaggt 20899762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 5590696 - 5590870
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | ||  ||||||||||||||||   ||||||||||||| |||| ||||  |||||| |||||  |||    
T  5590696 agagactggttcaaacgaaccccaacgtctctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaaccgtcagagtaagg 5590795  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| |||  |||||||||||||||| ||||    
T  5590796 tgtgccattacaacggctctgctgccctccacctctataaataggggattcaatgcagtccccaaggtagaatct 5590870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 19329925 - 19330052
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||| ||||||||||| | |||| ||  | || |||||||||||||||| |||| |||||||||||||| |||||||||  |||||||||||||  ||||    
T  19329925 agaccggttcaaacgagccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccagagcttggtg 19330024  T
Q  117 tgccattacaacggctctgcagccctcc 144  Q
    ||||||||||| ||||||| ||||||||    
T  19330025 tgccattacaatggctctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 33622489 - 33622653
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcc---agagcc 111  Q
    ||||||||||| ||||||||  ||| |||||  |  | ||||| |||||||||||   ||||||||||||| ||| |||||  ||||| ||   ||||      
T  33622489 agagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccaggatttcgtaaccaccgtcagagta 33622588  T
Q  112 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccc 176  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  33622589 aggtgtgtaattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccc 33622653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 22510182 - 22510102
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgattt 95  Q
    ||||||||||| ||||||||| ||| |||||  | ||||||||||||||||||||   ||||||||||||| |||||||||    
T  22510182 agagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgattt 22510102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 19330051 - 19330092
Alignment:
Q  175 cccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  19330051 cccaaggtagaatctatctcttcctctaaaccctcactctct 19330092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 3770461 - 3770257
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| ||||| || || ||| |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||    
T  3770461 agagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacactttccacgattttgtaaccgccagagccagg 3770362  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||| |||||||||| ||| ||||||||||| ||    
T  3770361 tgtgccattacaacggctctgcagccctccacctctataaataggggattcacaacagtccccaaggtagaatctatctcttcctttaaaccctcactct 3770262  T
Q  215 ctctg 219  Q
    |||||    
T  3770261 ctctg 3770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 41266197 - 41266399
Alignment:
Q  18 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 117  Q
    ||||||||||||||||| |||| ||||| || || ||||||||||||||||||  |||||||||||||  |||||| |  ||||||||||||||||||||    
T  41266197 gactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggttacacttctcacgatatcgtaaccgccagagccaggtgt 41266296  T
Q  118 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctct-aaaccctcacgctct 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||| |||||||||| ||||    
T  41266297 gccattacaacggctctgcagccctccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaaccctcactctct 41266396  T
Q  217 ctg 219  Q
    |||    
T  41266397 ctg 41266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 23755820 - 23756021
Alignment:
Q  18 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 117  Q
    |||||||||||| |||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  23755820 gactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagccaggtgt 23755919  T
Q  118 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctctc 217  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  23755920 gccattacaacggctctacagccttccacctctataaataggggactcacaacagtccccaaggtagaatctatctcttcctctaaaccctcactctctc 23756019  T
Q  218 tg 219  Q
    ||    
T  23756020 tg 23756021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 16 - 219
Target Start/End: Original strand, 25133933 - 25134136
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||| |||||  | || |||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||    
T  25133933 gagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttaccacgatttcgtaaccgccagagccaggt 25134032  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||||| |||||||||| |||  |||    
T  25134033 gtgccactacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctatctcttcctctaaaccatcattctc 25134132  T
Q  216 tctg 219  Q
    ||||    
T  25134133 tctg 25134136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 42534129 - 42534322
Alignment:
Q  23 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 122  Q
    |||||||||| | |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||    
T  42534129 gttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccat 42534228  T
Q  123 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||| |||  || |||||||||||| ||||    
T  42534229 tacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatctaactcctccgctaaaccctcactctct 42534322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 23929997 - 23929797
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| |||||||| |||| |||||||||| || || |||||| |||||||||||  ||||||||||||| ||||||||   ||||||||||||||||||    
T  23929997 gagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgtaaccgccagagccaggt 23929898  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| |||    
T  23929897 gtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaaggtaaaatctaactcttcctctaaaccctcactctc 23929798  T
Q  216 t 216  Q
    |    
T  23929797 t 23929797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 209
Target Start/End: Complemental strand, 19092920 - 19092728
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    ||||| |||||||||||| |||| ||||| || || ||||||||||||| |||| |||||||||||||| |||| | ||   |||||| |||| | ||||    
T  19092920 agactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacacttcccacaagttcgaaaccgcgagagtctggtg 19092821  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 209  Q
    || |||||||||||||||||||||| ||||||||||| |||| |||||||  ||||||||||||||||||| ||||||| |||||||||||||    
T  19092820 tgtcattacaacggctctgcagccccccacctctatatataggggactcatagcagtccccaaggtaggatttatctcttcctctaaaccctc 19092728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 29568507 - 29568315
Alignment:
Q  23 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 122  Q
    |||||||||| | |||| ||||| ||||| ||||| |||||||||||| | |||||||||||| |||||||||  |||||||||||||||||||| ||||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  123 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||||||||||||| |||||||||||||||||||| | |||||||  |||  | ||||| ||| |||||| ||| ||||||||||||||| ||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactcatagcaaccgccaagttagaatctatgtcttcctctaaaccctcactctct 29568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 3105404 - 3105204
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| ||||||||||| | |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  |||||   ||||  ||||    
T  3105404 gagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcataaccatgagagttaggt 3105305  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    ||| ||||||||||||||| ||  ||||||||||||||||||  |||||||  |||||||||||||||| ||||| |||| |||||||| |||||| |||    
T  3105304 gtgtcattacaacggctctacaatcctccacctctataaatatgggactcatagcagtccccaaggtagaatctaactcttcctctaaaacctcactctc 3105205  T
Q  216 t 216  Q
    |    
T  3105204 t 3105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 26155019 - 26155131
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    ||||||||||||||| || |||||||||||||| |||||||||  ||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  26155019 gttcccgcaataaacgctctggcggttacacttcccacgatttcgtaaccaccatagccaggtgtgccattataacggctatgcagccctccacctctat 26155118  T
Q  153 aaatagaggactc 165  Q
    |||||| ||||||    
T  26155119 aaataggggactc 26155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 27347370 - 27347196
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | || ||||||||||||||||| | ||| ||||||||| ||| |||||  |||||| ||| |  |||    
T  27347370 agagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacacttcccatgatttcgtaaccgtcagtgttagg 27347271  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||| || |||||||||| |||||| |||| ||| |||  |||||||||||||||| ||||    
T  27347270 tgtgccattacaacggctttgtagccctccacgtctatacataggggattcaatgcagtccccaaggtagaatct 27347196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 26159154 - 26159236
Alignment:
Q  137 agccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctctctg 219  Q
    |||||||||||||||||||||| |||||||  ||||| |||||||||| |||||||||| ||||||||||||||| |||||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctctaaaccctcactctctctg 26159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 391659 - 391459
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||| |||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||  ||||  ||||||||||||||||||    
T  391659 gagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggttacacttcccataatttcgtaaccgccagagccaggt 391560  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  391559 gtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 391460  T
Q  216 t 216  Q
    |    
T  391459 t 391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 380961 - 380767
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||| ||||| ||||| |||||||||||||| ||| ||||||||||||||  ||| ||||  ||||| ||||||||||||    
T  380961 gagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacacttctcacaatttcgtaacctccagagccaggt 380862  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||  |||||||||| |||||||||||||||    
T  380861 gtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccccatggta-aatctatctcttcctctaaaccctcac 380767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 2085741 - 2085945
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||| |||||||||||| |||||||||| || ||||||||||||||||||    ||||  |||||||| |||||||||  |||||||||||||||||    
T  2085741 agagactagttcaaacgaaccacaatgtctctctgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccgccagagccagg 2085840  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  2085841 tgtgccattacaacggttctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctatctcttcctctaaaccctcactct 2085940  T
Q  215 ctctg 219  Q
    |||||    
T  2085941 ctctg 2085945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 18040480 - 18040683
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  |||||| ||||||||||    
T  18040480 agagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgtcagagccagg 18040579  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||| ||| |||||| |||||||||| |||| ||    
T  18040580 tgtgccattacaacggctctgcagctctccacctctataaataggggactca-agcagtccccaaggtagaatcaatctcttcctctaaaccttcactct 18040678  T
Q  215 ctctg 219  Q
    |||||    
T  18040679 ctctg 18040683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 7999850 - 7999650
Alignment:
Q  14 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 113  Q
    ||||||||||||| ||||||| |||| ||||| || ||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||    
T  7999850 cagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccag 7999751  T
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgc 213  Q
    ||||| |||||||||||  |||||| |||||||||||||||| ||  |||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  7999750 gtgtgtcattacaacgg--ctgcagtcctccacctctataaacaggagactcacggcagtccccaaggtagaatctatctcttcctctaaaccctcactc 7999653  T
Q  214 tct 216  Q
    |||    
T  7999652 tct 7999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 18574016 - 18574220
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||| |||||||||||||| |||| ||||| || || |||||| ||||||||||| |||||||||||||| |||||||||  |||||||||||||||||    
T  18574016 agagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagg 18574115  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcccc---aaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| |||||   ||||||| |||||||||| ||||||||| |||||    
T  18574116 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcattccccaagaaggtagaatctatctcttcctctaaactctcac 18574215  T
Q  212 gctct 216  Q
     ||||    
T  18574216 tctct 18574220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 24033965 - 24033762
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||||||||| || || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||| || || ||    
T  24033965 gagactggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagt 24033866  T
Q  116 gtgccattacaacggctctgcagccctccacct---ctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacg 212  Q
    |||||||||||||||||||||| ||||||||||    ||||| ||| |||||||  ||||||||||| |||| |||||||||| |||||||||| ||||     
T  24033865 gtgccattacaacggctctgcaaccctccacctatattataactaggggactcatagcagtccccaatgtagaatctatctcttcctctaaaccttcact 24033766  T
Q  213 ctct 216  Q
    ||||    
T  24033765 ctct 24033762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 32009012 - 32009213
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||  ||||| || || ||||||||||||| |||| | ||| |||||||| |||||||||  |||||||||||| ||||    
T  32009012 agagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttcccacgatttcgtaaccgccagagtcagg 32009111  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||  | | |||||||||||  |||||||||| ||||||||||||||| ||    
T  32009112 tgtgccattacaacggctctacagccctccacctctataaataggggactcaaagtactccccaaggtaaaatctatctcttcctctaaaccctcactct 32009211  T
Q  215 ct 216  Q
    ||    
T  32009212 ct 32009213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 7454666 - 7454866
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| |||||| |||| | |||| |||||  | || |||||| ||||||||||| || ||||||||||| |||||||||  ||||||||||||||||||    
T  7454666 gagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactctatgacggttacacttcccacgatttcgtaaccgccagagccaggt 7454765  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||| ||| |||||||||| ||| ||||||||||| |||    
T  7454766 gtgccattacaacggctctgcagccttccacctctataaataggggactcatagcagtccccaagttagaatctatctcttcctgtaaaccctcactctc 7454865  T
Q  216 t 216  Q
    |    
T  7454866 t 7454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 28 - 210
Target Start/End: Original strand, 10532801 - 10532983
Alignment:
Q  28 aacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaa 127  Q
    ||||||| |||| ||||| || || ||||| ||||||||| |  ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  128 cggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
    ||||||||||||||||||||||||||||||| ||||| |  | |||||||||||||| || ||||||| | ||||||||||||    
T  10532901 cggctctgcagccctccacctctataaataggggacttaatggagtccccaaggtagaatttatctcttcatctaaaccctca 10532983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 211
Target Start/End: Complemental strand, 11709562 - 11709373
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    ||||||||||||| |||| ||||| || || |||||| |||||| |||| |||||||||||||| |||||||||  |||  ||||||||| |||||||||    
T  11709562 ggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctggcggttacacttcccacgatttcgtaaatgccagagcctggtgtgcca 11709463  T
Q  122 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||||||| ||||||||||||||| |||| |||||| | |||||||  ||||||| ||| |||||||||||| |||||||||    
T  11709462 ttacaacggctctgcaaccctccacctctatatataggggactctcagcagtccgaaaggtagaatcgatctctccctcttaaccctcac 11709373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 41280846 - 41280983
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    |||||||||||||||||| |||||||||||||| |||||||||  ||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  41280846 gttcccgcaataaactctctggcggttacacttcccacgattttgtaacccccagagtcaggtgtgccattacaacggctctgcagtcctccacctctat 41280945  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatcta 190  Q
    |||||| |||||||   ||||||||||||||| |||||    
T  41280946 aaataggggactcataacagtccccaaggtagaatcta 41280983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 24060757 - 24060563
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||| ||||| ||||||| ||||  |||| || |||||||| ||||||| |||| |||| ||||||||| | |||||||  |||||||||||||| ||||    
T  24060757 agaccggttctaacgaaccacaacatctctctgcatgttcctgcaataatctctctggcagttacacttcctacgattttgtaaccgccagagcctggtg 24060658  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||| |||||||||||||||||||||||||||||| |||  ||||||   |||||| ||||||||| ||||||| || |||||||||||||||    
T  24060657 tgccatcacaacggctctgcagccctccacctctatatataagggactcttagcagtctccaaggtagaatctatcgcttcctctaaaccctcac 24060563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 25820908 - 25820743
Alignment:
Q  24 ttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatt 123  Q
    |||||||||||  ||| |||||  | || ||||| |||||||||||   ||||||||||||| |||||||||  |||||| |||||  ||||||||||||    
T  25820908 ttcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagtaaggtgtgccatt 25820809  T
Q  124 acaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    ||||||||| |||||||||||||||||| |||||| |||||||  |||||||||| ||||| ||||    
T  25820808 acaacggctttgcagccctccacctctaaaaataggggactcaatgcagtccccatggtagaatct 25820743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 33273604 - 33273701
Alignment:
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||  | |||||||||||||| ||||||||||  ||||||||||||||    
T  33273604 gtgtgccattacaacggctctgcaaccctccacctctataaataggggactcataggagtccccaaggtagaatctatctctttctctaaaccctcac 33273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 22609492 - 22609631
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||| |||||||||||||| || || |||| || ||||||| ||||||||||||| || ||||||||| |  ||||||||  ||||||||||||||||||    
T  22609492 gagattggttcaaacgaaccacgatatctctctgcatgttcacgcaataaactctctgtcggttacacatctcacgatttcgtaaccgccagagccaggt 22609591  T
Q  116 gtg--ccattacaacggctctgcagccctccacctctata 153  Q
    |||  |||| |||||| ||||||| |||||||||||||||    
T  22609592 gtgtaccatcacaacgactctgcaaccctccacctctata 22609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 17775755 - 17775705
Alignment:
Q  169 gcagtccccaaggtaggatctatctctccctctaaaccctcacgctctctg 219  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  17775755 gcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 17775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 1788732 - 1788677
Alignment:
Q  134 tgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||||||||||  ||||||  |||||| ||||||||| ||||    
T  1788732 tgcagccctccacctctataaataggagactcaatgcagtcaccaaggtagaatct 1788677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 33273523 - 33273598
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacga 92  Q
    |||| ||||||||||| | |||| ||||| || || |||||||||||||  ||| |||||||||||||| ||||||    
T  33273523 agaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacacttcccacga 33273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 22282161 - 22282225
Alignment:
Q  73 ggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgca 137  Q
    |||| ||||||||  || |||||  |||||||||||  || ||||||||||||||||||||||||    
T  22282161 ggcgattacacttctcaagatttcgtaaccgccagacacacgtgtgccattacaacggctctgca 22282225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 23574594 - 23574394
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||| ||| ||||||||||||||||| ||  |||| |||||||||| ||    
T  23574594 gagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggttacactttccacgacttcgtaacagccagagccaagt 23574495  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||| |||||||| |||||||||| ||||||||||||||| |||    
T  23574494 gtgccattacaacggctctgcagccctctacctctataaataggggactcaaagcagtccacaaggtagaatctatctcttcctctaaaccctcactctc 23574395  T
Q  216 t 216  Q
    |    
T  23574394 t 23574394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 19860052 - 19860251
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    ||||||||||||||||||  ||| ||||| | |||||||||| |||||| |||| ||| |||||||||| |||||||||  |||||||||||||||||||    
T  19860052 agactggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtg 19860151  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    | ||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||| | |||||||||| |||| ||||    
T  19860152 tcccattacaacggctccgcagccctccacctctataaataggggactcacagcagtccccaaggtagaatttatctattcctctaaaccgtcactctct 19860251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 18736200 - 18736007
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||| |||||||||||| | |||| ||||| ||||| |||||||||||||||||| ||||| ||| |||| |||| ||||  ||||||||||||||||||    
T  18736200 gagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgattagacttcccacaatttcgtaaccgccagagccaggt 18736101  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 209  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||| ||| || ||||||| |||||||||||||    
T  18736100 gtgccattacaacggctcagcagccctccacctctataaataggggactcatagcagtccccaagctagaatttatctcttcctctaaaccctc 18736007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 4409397 - 4409193
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| |||||  | || ||||||||||||||| |  | ||||||||||||  ||||||||  ||||||||||||| |||    
T  4409397 agagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggttacacttctcacgattttgtaaccgccagagcaagg 4409298  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  4409297 tgtgccattgtaacggctttgcagccctccacctctataaatagaggattcaatgcagtccccaaggtagaatctatctcttcctctaaaccctcactct 4409198  T
Q  215 ctctg 219  Q
    |||||    
T  4409197 ctctg 4409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 7968493 - 7968695
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| || || |||||| |||||||| |  ||||||||||||||||||| ||||  |||||||||||| ||||    
T  7968493 agagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaaccgccagagtcagg 7968592  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||||  ||||||||||||| || |||||||| | ||||| ||||||||| ||    
T  7968593 tgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtccccaaggcagaatctatcttttcctcttaaccctcactct 7968692  T
Q  215 ctc 217  Q
    |||    
T  7968693 ctc 7968695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 14910805 - 14910605
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||| ||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||| ||||  |||| |||||||| | |||    
T  14910805 agaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacaatttcgtaactgccagagcgatgtg 14910706  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtag-gatctatctctccctctaaaccctcacgctc 215  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||| |||| ||||||||||||||| |||    
T  14910705 tgccattacaacggctttgcagccctccacctctatatataggggactcactgcagtccccaaggtagaaatctagctcttcctctaaaccctcactctc 14910606  T
Q  216 t 216  Q
    |    
T  14910605 t 14910605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 8306261 - 8306061
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||   |||| ||||| ||  | |||||||||||||||||| |||||||||||||||||| |||||  |||| || |||| ||||    
T  8306261 agagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactttccatgatttcataactgctagagtcagg 8306162  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||     |||||| ||||||||||||||| ||    
T  8306161 tgtgccattacaacggctctgcaaccctccacctctataaataggggactcacagcagtccccaaggtag----aatctcttcctctaaaccctcactct 8306066  T
Q  215 ctctg 219  Q
    |||||    
T  8306065 ctctg 8306061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 12738694 - 12738495
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    ||||| |||||||||||| |||| ||||| || || |||||||||||||||||| | | |||||||||| |||||||||  ||| || || |||||| ||    
T  12738694 agactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagaggttacacttcccacgatttcgtaatcgtcatagccagatg 12738595  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||| |||||| |||||||||| ||||||||||| ||| ||||    
T  12738594 tgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtcccctaggtagaatctatctcttcctctaaacccccactctct 12738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 15119719 - 15119921
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||| ||||||||||||| |||| ||||| || || |||||||||||||||||| | ||||||| |||| |||||||||  |||||||||||||||||    
T  15119719 agagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatacttcccacgattttgtaaccgccagagccagg 15119818  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    ||||||||||||  ||||||||| | |||||||||||||||||| |||||||   || |||||||||||| |||||||||| | ||||||||| ||| ||    
T  15119819 tgtgccattacactggctctgcaactctccacctctataaataggggactca--acaatccccaaggtagaatctatctcttcatctaaacccccactct 15119916  T
Q  215 ctctg 219  Q
    |||||    
T  15119917 ctctg 15119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 18014464 - 18014652
Alignment:
Q  23 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 122  Q
    |||||||||||| ||||||| | |||  | ||||||||||||| |||| ||| ||||| |||| |||||||||  ||||||||||||| |||||||||||    
T  18014464 gttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggttagacttcccacgatttcgtaaccgccagagctaggtgtgccat 18014563  T
Q  123 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||||||||||||||||||||||  ||| |||||||  |||||||||||||||| ||| |||||| ||||| |||||||||    
T  18014564 tacaacggctctgcagccctccacctctatatgtaggggactcatagcagtccccaaggtagaatcaatctcttcctcttaaccctcac 18014652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 29482791 - 29482591
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| ||||||||||| | |||| ||||| || ||||||||||||||||||||| |  | |||| |||| |||||||||  ||||||| ||| ||||||    
T  29482791 gagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttatacttcccacgatttcgtaaccgctagaaccaggt 29482692  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||||||  | |||||||||||||| |||||||||| ||||||||||| ||| |||    
T  29482691 gtgccattacaacgactctacagccctccacctctataaataggggactcatagtagtccccaaggtagaatctatctcttcctctaaacccccactctc 29482592  T
Q  216 t 216  Q
    |    
T  29482591 t 29482591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 18729121 - 18728926
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| |||||||| || | |||| ||||| || || ||| |||||||||||||| |||||||||||||| |||||||||  || |||||||||||||||    
T  18729121 gagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccacgattttgtacccgccagagccaggt 18729022  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    || ||||||||| | |||||||||||||||||||||||||||| |||||||   |||||| |||||||| |||||||||| ||||||| |||||||    
T  18729021 gttccattacaatgtctctgcagccctccacctctataaataggggactcataacagtcctcaaggtagaatctatctcttcctctaatccctcac 18728926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 29095016 - 29095190
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||| |||||||||||||  ||| |||||  | || |||||||||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||    
T  29095016 agagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttagg 29095115  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  29095116 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 29095190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 24438560 - 24438760
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||| |||||||||||||| |||  |||||  | || ||||| ||||| |||||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  24438560 agagattggttcaaacgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagccagg 24438659  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||| |||||||||| |||||||  |||| |||||||||||||| |||||||| ||||| |||||||||  |||||||||| ||||||||||||||| ||    
T  24438660 tgtgtcattacaacgactctgcaatcctctacctctataaataggggactcacagcagt-cccaaggtataatctatctcttcctctaaaccctcactct 24438758  T
Q  215 ct 216  Q
    ||    
T  24438759 ct 24438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 18258594 - 18258794
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| |||||||| |||| |||| ||||| |  ||  ||||||||||||||||||| || ||||||||| |||| ||||  |||||  |||||||||||    
T  18258594 gagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgtaaccatcagagccaggt 18258693  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    |||||| |||||||||||| |||||||| |||||||||||||| ||||||||  ||||| ||||||||| |||||| | |  |||||||||||||| |||    
T  18258694 gtgccactacaacggctctacagccctctacctctataaataggggactcacaacagtctccaaggtagaatctatatttttctctaaaccctcactctc 18258793  T
Q  216 t 216  Q
    |    
T  18258794 t 18258794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 23524227 - 23524128
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    |||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23524227 gttcccgcaataaactctttgatggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctctgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 15349665 - 15349796
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    |||||| |||||| |||| | |||||||||||| |||||||||  ||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  15349665 gttcccacaataatctctctcgcggttacacttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacggctctgcagccctccacctctat 15349764  T
Q  153 aaatagaggactcacggcagtccccaaggtag 184  Q
    | |||| ||||||   ||||||||||| ||||    
T  15349765 atataggggactcttagcagtccccaacgtag 15349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 18043455 - 18043337
Alignment:
Q  101 ccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctc 200  Q
    ||||||||| || | ||| ||||||||||||| ||||||||||||||||||||||||| ||||| |  |||||||||||||||| || ||||||| ||||    
T  18043455 ccgccagagtcatgcgtgtcattacaacggctttgcagccctccacctctataaataggggactaaatgcagtccccaaggtagaatttatctcttcctc 18043356  T
Q  201 taaaccctcacgctctctg 219  Q
    ||||||||||| |||||||    
T  18043355 taaaccctcactctctctg 18043337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 211
Target Start/End: Original strand, 15319015 - 15319172
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    ||||| ||||||| |||| | |||||||||||| |||||||||  ||||||||||| | |||||| |||| |||||| ||||||||||||||||||||||    
T  15319015 gttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcacaacgactctgcagccctccacctctat 15319114  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    | |||| | ||||   |||||||||||||||| ||| | ||||  ||||||||||||||    
T  15319115 atatagggaactcttagcagtccccaaggtagaatcga-ctctttctctaaaccctcac 15319172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 15369661 - 15369792
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    ||||||||||||| || | |||||||||||||| | || ||||  ||||||||||| | |||||| |||| | |||| |||| |||||||||||||||||    
T  15369661 gttcccgcaataatctgtctggcggttacacttcctacaatttcgtaaccgccagacctaggtgtaccatcataacgactctacagccctccacctctat 15369760  T
Q  153 aaatagaggactcacggcagtccccaaggtag 184  Q
    | |||||||||||   ||||||||||||||||    
T  15369761 atatagaggactcttagcagtccccaaggtag 15369792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 3876512 - 3876376
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    |||||||| || |||||| |||||  | ||| |||||||||||| |||| || || |||||||| | |||||||  |||||||||||   ||||||| |     
T  3876512 ggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacacttcctacgatttcgtaaccgccagacttaggtgtgtct 3876413  T
Q  122 ttacaacggctctgcagccctccacctctataaatag 158  Q
    | |||||||||||||||||||||||||||||| ||||    
T  3876412 tcacaacggctctgcagccctccacctctatatatag 3876376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 17757022 - 17757140
Alignment:
Q  21 tggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcc 120  Q
    ||||||||||||||  ||| |||||  | || |||||| ||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||||||||    
T  17757022 tggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacacttcccacgattttgtaaccgtcagagtaaggtgtgcc 17757121  T
Q  121 attacaacggctctgcagc 139  Q
    ||||||||||||| |||||    
T  17757122 attacaacggctcggcagc 17757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 14480135 - 14480001
Alignment:
Q  75 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtc 174  Q
    |||||||| ||||||||||||  |||| ||| ||  || |||||||||||||| ||||||||||||  |||||  |||| |||| ||||||    |||||    
T  14480135 cggttacattttccacgatttcgtaactgccggacacacgtgtgccattacaatggctctgcagccacccaccggtatatataggggactcttaacagtc 14480036  T
Q  175 cccaaggtaggatctatctctccctctaaaccctca 210  Q
    ||| |||||| |||||||| ||||||||||||||||    
T  14480035 ccctaggtagaatctatct-tccctctaaaccctca 14480001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 21508637 - 21508716
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatt 94  Q
    |||||||||||||| ||||| |||  ||||| || || ||||| |||||||||||| |||||||||||||| ||||||||    
T  21508637 agagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacacttcccacgatt 21508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 7099285 - 7099368
Alignment:
Q  75 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatag 158  Q
    |||||||||||| | ||||||  |||||||  || |||  |||||||||||||||||||||||  |  ||||||||||||||||    
T  7099285 cggttacacttttcccgatttcgtaaccgcgggacccacatgtgccattacaacggctctgcattcacccacctctataaatag 7099368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 8795345 - 8795262
Alignment:
Q  75 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatag 158  Q
    |||||||||||| | ||||||  |||||||  || |||  |||||||||||||||||||||||  |  ||||||||||||||||    
T  8795345 cggttacacttttcccgatttcgtaaccgcgggacccacatgtgccattacaacggctctgcattcacccacctctataaatag 8795262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 6109473 - 6109583
Alignment:
Q  77 gttacactttccacgatttgctaaccgccagagccaggtgtgccatta---caacggctctgcagccctccacctctataaatagaggactcacggcagt 173  Q
    |||||||||||||||||||  |||||||||||  || |||||| ||||   |||||| ||||||  |  ||||||||||| | || ||||||   |||||    
T  6109473 gttacactttccacgatttcgtaaccgccagacacatgtgtgctattactgcaacggttctgcattcacccacctctatataaaggggactcctcgcagt 6109572  T
Q  174 ccccaaggtag 184  Q
    |||||||||||    
T  6109573 ccccaaggtag 6109583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 1520 - 1724
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| ||||  |||| ||||| |||||||||||||||||| ||||||||||||||  ||||||||  |||| || |||||||||    
T  1520 agagactggttcaaacgaaccacaacatctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttataactgctagagccagg 1619  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||| | |||||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  1620 tgtgccattacaacagctctacagccgtccacctctataaatagggcactcaaagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 1719  T
Q  215 ctctg 219  Q
    |||||    
T  1720 ctctg 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 19442109 - 19442313
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||| ||||| |||| ||||| ||||| |||||| ||||||||||| ||||||||| |||| || ||||||  |||||||||||| |||     
T  19442109 agagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttcccccgatttcgtaaccgccagagtcaga 19442208  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  19442209 tgtgtcattacaacggctttgcagcactccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 19442308  T
Q  215 ctctg 219  Q
    |||||    
T  19442309 ctctg 19442313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 19967417 - 19967621
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| || || |||||||||||||||||| ||||||||||||   |||||||||  |||||||||||||||||    
T  19967417 agagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacaccacccacgatttcgtaaccgccagagccagg 19967516  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    |||| ||||||||||| | |||| |||||||||||||||||||| |||||||  |||||||| ||||||| ||| |||||| ||||||||||||||| ||    
T  19967517 tgtgtcattacaacggttatgcaaccctccacctctataaataggggactcaaagcagtccctaaggtagaatccatctcttcctctaaaccctcactct 19967616  T
Q  215 ctctg 219  Q
    |||||    
T  19967617 ctctg 19967621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 9859171 - 9858973
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||| |||||||||||| |||| ||||| || || ||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||| ||    
T  9859171 gagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgtcagagccaagt 9859072  T
Q  116 gtg----ccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
    |||    | |  ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| || ||||||| | ||||||||||||    
T  9859071 gtgtgtgcaaccacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatatatctcttcatctaaaccctca 9858973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 38621997 - 38621812
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    |||| |||||||| |||| ||||| || || |||||||||||||| | |||||| |||||||||||||||||||  ||||| |||||||||  |||||||    
T  38621997 ggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacactttccacgatttcgtaaccaccagagccaaatgtgcca 38621898  T
Q  122 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccc 207  Q
    |||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||| ||||  |||| |||||||||||    
T  38621897 ttacaacggctctgcagccctccacctctatatataagggactcactgcagtccccaaggtagaatctcactcttcctctaaaccc 38621812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 60 - 216
Target Start/End: Original strand, 8990805 - 8990961
Alignment:
Q  60 caataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataga 159  Q
    ||||||||||| || | ||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  8990805 caataaactctctgacagttacacttcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccctccacctctgtaaatagg 8990904  T
Q  160 ggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||| |||||||||| ||||| ||||| |||| ||||||||||||||| ||||    
T  8990905 ggactcactgcagtccccacggtagaatctaactcttcctctaaaccctcactctct 8990961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 209
Target Start/End: Original strand, 8995475 - 8995630
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||| ||||||| || | ||||||||||||||||||||||||||||    
T  8995475 gttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagctaggtgtgtcaat-caacggctctgcagccctccacctctat 8995573  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 209  Q
    |||||| |||||||| ||| |||||||||||| ||||| |||| |||||||||||||    
T  8995574 aaataggggactcactgcattccccaaggtagaatctaactcttcctctaaaccctc 8995630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 21817775 - 21817911
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    |||||||||||||||||   ||| ||||||||| |||||||||  |||||| |||||  ||||||||||||||||||||||||| ||| ||||||| |||    
T  21817775 gttcccgcaataaactcacaggctgttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttat 21817874  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||| |||||||  |||||||||||||||| ||||    
T  21817875 aaataggggactcaatgcagtccccaaggtagaatct 21817911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 24973924 - 24974085
Alignment:
Q  54 ttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctata 153  Q
    ||||| ||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||||||||||||||||||||||||||||||| | |||||||    
T  24973924 ttcccacaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctctaactctata 24974023  T
Q  154 aatagaggactcacggcagtccccaaggtaggatctatctctccctct-aaaccctcacgctct 216  Q
    ||||| |||||||  |||||| ||||||||| |||  ||||| ||||| |||||||||| ||||    
T  24974024 aataggggactcaatgcagtcaccaaggtagaatc--tctcttcctctaaaaccctcactctct 24974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 22186045 - 22186159
Alignment:
Q  75 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtc 174  Q
    ||||||||||| |||||||||  |||||| | |||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |  ||||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  175 cccaaggtaggatct 189  Q
    |||||||||| ||||    
T  22186145 cccaaggtagaatct 22186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 21815619 - 21815696
Alignment:
Q  112 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||| ||||||||| ||||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatct 21815696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 1810 - 1613
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaa-ctctttggcggttacactttccacgatttgctaaccgccagagccag 113  Q
    ||||| |||||||||||||| |||| ||||| || || |||||||||||||| |||| |||||||||||||| |||||||||  |||||||||||||||     
T  1810 agagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaaactctctggcggttacacttcccacgatttcgtaaccgccagagccaa 1711  T
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    || |||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||| |||| |||||||||| |||||||||||||||    
T  1710 gtatgccattacaacggctctgcagccatccacctctataaataggggactcacaacagtccccaatgtagaatctatctcttcctctaaaccctcac 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 15517 - 15365
Alignment:
Q  64 aaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggac 163  Q
    ||||||| |||||||||||||| |||||||||  |||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15517 aaactctctggcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggac 15418  T
Q  164 tcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||   ||||||||  ||||| |||||||||| ||||||||||||||| ||||    
T  15417 tcataacagtccccgcggtagaatctatctcttcctctaaaccctcactctct 15365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 1040 - 1235
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| |||| || || || |||||||| |||||||||||| |||||||||||||| |||||||||  ||| ||| ||||||||||    
T  1040 gagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacacttcccacgatttcgtaatcgctagagccaggt 1139  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    || |||||||||||||| || |||||||||||||||||||||| |||||||| |||||| |||| |||| |||||||||| |||||||||||||||    
T  1140 gttccattacaacggctatgtagccctccacctctataaataggggactcacagcagtctccaacgtagaatctatctcttcctctaaaccctcac 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 7 - 216
Target Start/End: Complemental strand, 75054 - 74845
Alignment:
Q  7 ggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcca 106  Q
    |||||| | ||||||||||||||||| | |||| || || |  || |||||||||||||||||| |||||||||||||| | |||||||  |||| ||||    
T  75054 ggagcaaccgagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgcca 74955  T
Q  107 gagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||| |||||| |||    
T  74954 gagccaggtgtgccattacaacggctctacagccctccacctctataaataggggactcaccgcattccccaaggtagaatctatctcttcctctatacc 74855  T
Q  207 ctcacgctct 216  Q
     |||| ||||    
T  74854 atcactctct 74845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 68882 - 68689
Alignment:
Q  7 ggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcca 106  Q
    |||||| | |||||| |||||||||| | |||| |||||    || |||||||||||||||||| | |||||||||||| |||||||||  |||||||||    
T  68882 ggagcaaccgagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgcca 68783  T
Q  107 gagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctc 200  Q
     ||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||| ||| ||||    
T  68782 aagcaaggtgtgtcattacaacggctttgcagccctccacctctataaataggggactcaccgcagtgcccaaggtagaatctatatcttcctc 68689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 30056 - 30252
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| ||||| |||||||||||||| ||| ||| |||||||||| |||| ||||  ||||| |||||||||||    
T  30056 agagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggttacacttcccacaatttcgtaaccaccagagccagg 30155  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    ||| || |||||| |||||||||||||||||||||||||||||  |||||||| |||||||| ||||||| |||||||||| |||||||| ||||||    
T  30156 tgttccgttacaatggctctgcagccctccacctctataaatacgggactcacagcagtccctaaggtagaatctatctcttcctctaaatcctcac 30252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 16315 - 16516
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||| ||||  |||| || || |||||||||||||||||| ||| |||||||||| |||||||||  ||||||||||||||||||    
T  16315 gagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggttacacttcccacgattttgtaaccgccagagccaggt 16414  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagt-ccccaaggtaggatctatctctccctctaaaccctcacgct 214  Q
    || ||||||||| |||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||| || ||||||| ||| ||||| ||||| ||    
T  16415 gtaccattacaatggctctgcagccctccacctctataaataggggactcaaagcagtcccccaaggtagaatttatctcttcctttaaactctcactct 16514  T
Q  215 ct 216  Q
    ||    
T  16515 ct 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 22915252 - 22915052
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||| |||||||||||  |||| ||||| || || |||||||||||||||||| | || ||||||||| |||||||||  |||||||| |||||| ||    
T  22915252 gagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttcccacgatttcataaccgccggagccaagt 22915153  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 215  Q
    || ||||||||||||||||||||| |||||||| ||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  22915152 gtaccattacaacggctctgcagctctccacctttataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 22915053  T
Q  216 t 216  Q
    |    
T  22915052 t 22915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 16853014 - 16853201
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    ||||||||| | | |||| ||||| || || ||| |||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  16853014 ggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcca 16853113  T
Q  122 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 209  Q
    |||||||   | ||||||||||||||||||||||||| |||||||  ||||||||||||| || |||| |   |||||||||||||||    
T  16853114 ttacaacatatttgcagccctccacctctataaataggggactcaatgcagtccccaagggagaatcttttcttccctctaaaccctc 16853201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 19790476 - 19790346
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    |||||||||||||||||||| |||| ||||| || || |||||| ||||||||||| || ||||||||||| |||||||||  |||||| ||||| ||||    
T  19790476 agagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacacttcccacgatttcgtaaccgtcagagtcagg 19790377  T
Q  115 tgtgccattacaacggctctgcagccctcca 145  Q
    |||||||||||||||||||||||||||||||    
T  19790376 tgtgccattacaacggctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 16914846 - 16914706
Alignment:
Q  76 ggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcc 175  Q
    |||||||| | |||||||||  ||||||||||| | |  ||||||||||||| ||||||||||||||||||||||||| ||||||| |||    ||||||    
T  16914846 ggttacacctcccacgatttcgtaaccgccagaccgatctgtgccattacaatggctctgcagccctccacctctatatatagagggctcttaacagtcc 16914747  T
Q  176 ccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||| | || |||||||||| |||| |||||||||| ||||    
T  16914746 ccaaagcagaatctatctcttcctcaaaaccctcactctct 16914706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 1998087 - 1998003
Alignment:
Q  135 gcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctctctg 219  Q
    ||||| |||||||||||||||||| | |||||  |||||||||||||||| |||| |||||  |||||||||||||| |||||||    
T  1998087 gcagctctccacctctataaatagggtactcaaagcagtccccaaggtagaatctgtctctgtctctaaaccctcactctctctg 1998003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 19773462 - 19773386
Alignment:
Q  141 ctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctc-tccctctaaaccctcacgctct 216  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  19773462 ctccacctctataaataggagactcacagcagtccccaaggtagaatctatctcttccttctaaaccctcactctct 19773386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 3559119 - 3559311
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||| |||||||||||||| |||  ||||    |||||||||||||    |||||||| ||||||||||||||||||||  |||| ||  || | |  |    
T  3559119 gagaccggttcaaacgaactgcaacatctcttcgcatgttcccgcaaatctctctttggaggttacactttccacgatttcgtaactgcaggaac-acat 3559217  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
    |  ||||||||||||||||||||||  ||| ||||||| |||| ||||||    |||| |||||||||| ||||| |||||||||||||||||||    
T  3559218 gaaccattacaacggctctgcagccacccatctctatatataggggactcttaacagttcccaaggtagaatcta-ctctccctctaaaccctca 3559311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 22006590 - 22006498
Alignment:
Q  118 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||| ||||||||||||||||||||||| |||  ||||||   |||||||||||||||| |||| |||  |||||| |||||||||    
T  22006590 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct-tcttcccctcttaaccctcac 22006498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 22014107 - 22014015
Alignment:
Q  118 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 211  Q
    |||||||||||| ||||||||||||||||||||||| |||  ||||||   |||||||||||||||| |||| |||  |||||| |||||||||    
T  22014107 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct-tcttcccctcttaaccctcac 22014015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 44635947 - 44635823
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    |||||| ||||||||||||||||| |||||    || |||||||| |    |||| |||||||||||||| |||||||||  |||||| | ||  || ||    
T  44635947 gagactagttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacacttcccacgatttcgtaaccgacggactcacgt 44635848  T
Q  116 gtgccattacaacggctctgcagcc 140  Q
    |||||||||||||||||||||||||    
T  44635847 gtgccattacaacggctctgcagcc 44635823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 36639696 - 36639652
Alignment:
Q  114 gtgtgccattacaacggctctgcagccctccacctctataaatag 158  Q
    ||||||||||||||||||||||||  |  ||||||||||||||||    
T  36639696 gtgtgccattacaacggctctgcattcacccacctctataaatag 36639652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 242872 - 242673
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||| ||||||||||||| |||| |||||  | || ||||||||||||||||||||||| ||||||||| ||||||||   ||||||| |||||||||||    
T  242872 agaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttcccacgattacgtaaccgcaagagccaggtg 242773  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||||  ||||||||| | ||| ||||| |||| |||||||| |||||| ||||    
T  242772 tgccattacaacggctctgccgccctccacctctatatatagagtactcacttcagtccccaggatagaatctaactcttcctctaaatcctcactctct 242673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 253512 - 253313
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||| |||||||| |||| ||||  |||| || || |||||||||||||||||| |||| ||||||||| |||||||||  |||||||||||||||||||    
T  253512 agaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacacttcccacgatttcgtaaccgccagagccaggtg 253413  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||||||||||||| || ||||||| ||||||| |||| |||| ||||||||  ||||||||||||||| ||||| |||| |||||||||| |||| ||||    
T  253412 tgccattacaacgactttgcagccgtccacctttatatataggggactcactacagtccccaaggtagaatctaactcttcctctaaaccgtcactctct 253313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 4202 - 4396
Alignment:
Q  22 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 121  Q
    ||||||||||||| |||| ||||  || || |||| ||||||||||||| | || ||||||| | |||||||||  ||||| ||||||||||||||||||    
T  4202 ggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacacatcccacgatttcgtaaccaccagagccaggtgtgcca 4301  T
Q  122 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
     |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||  || |||||||||| ||||||||||||||| ||||    
T  4302 ctacaacggctctgcagccctccacctctataaataggggactcacatcagtccccaagagagaatctatctcttcctctaaaccctcactctct 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 151299 - 151490
Alignment:
Q  24 ttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatt 123  Q
    ||||||||||| |||| ||||| ||  | ||||| |||||||||||| ||||| || ||||| |||||||||  ||||||| |||||||||| | ||| |    
T  151299 ttcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggcgttt-cacttcccacgatttcgtaaccgctagagccaggtcttccact 151397  T
Q  124 acaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||| |||||||||| ||| ||||||||||| ||||    
T  151398 acaacggctctgcagccctccacctctataaataggggactcacagcattccctaaggtagaatctatctcttcctttaaaccctcactctct 151490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 37234 - 37425
Alignment:
Q  24 ttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatt 123  Q
    ||||||| |||  ||| ||||| || |||||||| ||||||| |||| || ||||||||||| |||||||||  |||||||||||||| || |||||||     
T  37234 ttcaaacaaaccgcaacgtctctctgcatgttcctgcaataatctctctg-cggttacacttcccacgatttcataaccgccagagcctggcgtgccatc 37332  T
Q  124 acaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||||||||||||||||||||||||| |||| ||||||  |||||||| |||| ||| ||| |||||||||||| ||||||||| ||||    
T  37333 acaacggctctgcagccctccacctctatatataggggactcgtggcagtccgcaagatagaatcaatctctccctcttaaccctcactctct 37425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 19268 - 19147
Alignment:
Q  98 taaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctcc 197  Q
    ||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| |    
T  19268 taaccaccagagctaggtgtgccgttacaatggctctgcagccctccacctctataaataggggactcactgcagtccccaaggtagaatctatctcttc 19169  T
Q  198 ctctaaaccctcacgctctctg 219  Q
    ||||||| |||||| |||||||    
T  19168 ctctaaatcctcactctctctg 19147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 12486 - 12323
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    ||||||||||||| |||| | |||||||||||| ||| |||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  12486 gttcccgcaataatctctctagcggttacacttcccatgattttgtaaccgccagagcctggtgtgccattacaacggctctgcagcccttcacctctat 12387  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    | |||| |||||||   ||  ||||||||||  ||||| || | ||||||||||||||| ||||    
T  12386 atataggggactcataacaaaccccaaggtataatctaactattcctctaaaccctcactctct 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 2831 - 3029
Alignment:
Q  17 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 116  Q
    |||| ||||||||||||  |||||||||| || || ||||| | ||||| |||| | |||||||||||| |||||||||  |||||||||||||| ||||    
T  2831 agaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttacacttcccacgatttcgtaaccgccagagcctggtg 2930  T
Q  117 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    |||||||||||| |||||||||| ||||||||||||| |||| |||||||   ||||||| ||||||| ||||| ||||  ||| || ||||||| ||||    
T  2931 tgccattacaacagctctgcagctctccacctctatatatag-ggactcataacagtcccgaaggtagaatctaactctttctcgaagccctcactctct 3029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 54603 - 54770
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 115  Q
    ||||||||||||||||||   ||| ||||| || || |||||||||||||||||   || |||||||||| ||| |||||  |||||| |||||  ||||    
T  54603 gagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacacttcccatgatttcgtaaccgtcagagtaaggt 54702  T
Q  116 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggta 183  Q
    || |||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||| ||||||    
T  54703 gtaccattacaacggctatgcagccctccacctctataaataggggactcaatgcagtcccaaaggta 54770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 7349 - 7522
Alignment:
Q  15 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 114  Q
    ||||||||||||||||||||  ||| |||||  | || |||||||||||||||||   ||| ||||||||| | |||||||  |||| | |||||  |||    
T  7349 agagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttccaacgatttcgtaac-gtcagagtaagg 7447  T
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||| |||||||||||| ||||    
T  7448 tgtgccattacaacggctttgcagccctccacctctataaataggggactcaatgcaatccccaaggtagaatct 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 15034 - 14898
Alignment:
Q  53 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 152  Q
    |||||||||||||||||   ||| ||||||||| |||||||||  |||||| |||||  ||||||||||||||||||||||||| ||| ||||||| |||    
T  15034 gttcccgcaataaactcacaggctgttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttat 14935  T
Q  153 aaatagaggactcacggcagtccccaaggtaggatct 189  Q
    |||||| |||||||  |||||||||||||||| ||||    
T  14934 aaataggggactcaatgcagtccccaaggtagaatct 14898  T

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Target: scaffold0265; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 17190 - 17113
Alignment:
Q  112 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 189  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||| ||||||||| ||||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatct 17113  T

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Target: scaffold0096 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 10906 - 11037
Alignment:
Q  50 catgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctc 149  Q
    ||||||||||||||||||||   ||||||||||||| ||| |||||  |||||| |||||  ||||||||||||||||||||||| |||||||||||||     
T  10906 catgttcccgcaataaactcacaggcggttacacttcccatgatttcgtaaccgtcagagttaggtgtgccattacaacggctctacagccctccacctt 11005  T
Q  150 tataaatagaggactcacggcagtccccaagg 181  Q
    ||||||||| |||||||  | |||||||||||    
T  11006 tataaatagtggactcaatggagtccccaagg 11037  T

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Target: scaffold0025 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 216
Target Start/End: Original strand, 86424 - 86562
Alignment:
Q  78 ttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcccc 177  Q
    ||||||||||||||||||  ||| ||||||||||  |||||||||||||||| || |||| ||||||||||||||| |||| |||||||  ||||||||     
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatataggggactcatagcagtcccg 86523  T
Q  178 aaggtaggatctatctctccctctaaaccctcacgctct 216  Q
    ||| ||| |||||| ||| ||||||||| ||||| ||||    
T  86524 aagatagaatctatttcttcctctaaactctcactctct 86562  T

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Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 20342 - 20452
Alignment:
Q  74 gcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagt 173  Q
    |||||||||||| |||| ||||  |||||||  || ||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||    ||||    
T  20342 gcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaataggggactcttaacagt 20441  T
Q  174 ccccaaggtag 184  Q
    |||||||||||    
T  20442 ccccaaggtag 20452  T

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Target: scaffold0063 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 36830 - 36972
Alignment:
Q  67 ctctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactca 166  Q
    |||||||| |||||||||| |||| ||||  |||||| | ||  || ||||||||||||||||||||| |||||  ||||||||||| |||| ||||||     
T  36830 ctctttggaggttacacttcccacaatttcgtaaccgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatataggggactct 36929  T
Q  167 cggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
       ||||| | ||||||| ||||| |||||||||||||||||||    
T  36930 taacagtctctaaggtagaatcta-ctctccctctaaaccctca 36972  T

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Target: scaffold0063; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 49325 - 49419
Alignment:
Q  115 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 210  Q
    ||||||||||||||||||||||| ||  ||||||||||| |||| ||||||    | ||||| ||||||| ||||| |||||||||||||||||||    
T  49325 tgtgccattacaacggctctgcatccacccacctctatatataggggactcttaactgtccctaaggtagaatcta-ctctccctctaaaccctca 49419  T

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Target: scaffold0483 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 9335 - 9243
Alignment:
Q  16 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcgg-ttacactttccacgatttgctaaccgccag 107  Q
    ||||||||||||||||||| |||| ||||| || || ||||| |||||||||||| | |||| |||||||| |||| ||||  ||||||||||    
T  9335 gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttacacttcccacaatttcgtaaccgccag 9243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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