View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1203_low_13 (Length: 264)
Name: NF1203_low_13
Description: NF1203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1203_low_13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 692863 - 693115
Alignment:
| Q |
10 |
attatactaaagagtaaatgaaacaccaattgaacaaattacaaaacagttagatgagattaatttcatgattactactaaccccatgtttattcgtaat |
109 |
Q |
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| T |
692863 |
attatactaaagagtaaatgaaacaccaattgaacaaattacaa--cagttagatgagattaatttcatgattactactaaccccatgtttattcgtaat |
692960 |
T |
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| Q |
110 |
caaagagtttttgcaatgagtaatagcaccttgaatagcactctgcaactcttccatggaagaagcatctcgatcaccacgaagaagaacacccttttgt |
209 |
Q |
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| T |
692961 |
caaagagtttttgcaatgagtaatagcaccttgaatagcactctgcaactcttccatggaagaagcatctcgatcaccacgaagaagaacacccttttgt |
693060 |
T |
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| Q |
210 |
gaaagaacaccagaatgacttggtgaagatctcatcgaagaaggacaacttgaaa |
264 |
Q |
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| T |
693061 |
gaaagaacaccagaatgacttggtgaagatctcatcgaagaaggacaacttgaaa |
693115 |
T |
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