View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1203_low_5 (Length: 384)
Name: NF1203_low_5
Description: NF1203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1203_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 980883 - 981043
Alignment:
| Q |
23 |
acctcagctcgacaaatgggtcttctcatatctgtctcctatcacattatgttaaagcaaagaacaagctatagtatcgtaggtaacctgaaactaaatt |
122 |
Q |
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| T |
980883 |
acctcagctcgacaaatgggtcttctcaattctgtctcctatcatattatgttaaagcaaagaaaaagttagagtatgataggtaacctgaaactaaatt |
980982 |
T |
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| Q |
123 |
tgcaaaaatacaaccaaaatatgattct-cacattagaacaaaccatttcctacgccctcct |
183 |
Q |
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||||||||||| |||||||||||||| | |||||| |||| ||||||||| || |||||||| |
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| T |
980983 |
tgcaaaaatactaccaaaatatgattttacacattggaac-aaccatttcgtatgccctcct |
981043 |
T |
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