View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12040_high_41 (Length: 237)
Name: NF12040_high_41
Description: NF12040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12040_high_41 |
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Alignment Details
Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 5064085 - 5064226
Alignment:
| Q |
5 |
ataaaaaacatgttcttccataattctattatacaagaattacttcatagtccatgcttgttgcatatttgctgcgcaaaaacaaaactactaattgaaa |
104 |
Q |
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| T |
5064085 |
ataaaaaacatgttcttccataattctattatacaagaattacttcatagtccatgcttgttgcatatttgctgcgcaaaaacaaaactactaattgaaa |
5064184 |
T |
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| Q |
105 |
cacaagaaataatgttatcattttcgatcaaagggtcgagat |
146 |
Q |
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| T |
5064185 |
cacaagaaataatgttatcattttcgatcaaagggtcgagat |
5064226 |
T |
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