View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12040_low_10 (Length: 525)

Name: NF12040_low_10
Description: NF12040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12040_low_10
NF12040_low_10
[»] chr5 (40 HSPs)
chr5 (20-525)||(10298171-10298657)
chr5 (22-167)||(10290052-10290200)
chr5 (269-344)||(9747143-9747218)
chr5 (20-115)||(9747365-9747460)
chr5 (402-495)||(8419992-8420085)
chr5 (422-495)||(21351906-21351979)
chr5 (423-507)||(31084309-31084393)
chr5 (308-370)||(10290202-10290264)
chr5 (187-259)||(9747249-9747320)
chr5 (430-495)||(42893353-42893418)
chr5 (424-495)||(6247609-6247680)
chr5 (421-495)||(21191057-21191131)
chr5 (421-490)||(14674253-14674322)
chr5 (432-489)||(15405062-15405119)
chr5 (421-524)||(13287366-13287474)
chr5 (421-489)||(39698525-39698593)
chr5 (423-481)||(41995457-41995515)
chr5 (438-495)||(21576746-21576803)
chr5 (430-495)||(33178018-33178083)
chr5 (430-502)||(41633728-41633800)
chr5 (432-506)||(5894823-5894897)
chr5 (421-495)||(21522734-21522808)
chr5 (421-495)||(21533300-21533374)
chr5 (430-495)||(30135306-30135372)
chr5 (434-495)||(7677702-7677763)
chr5 (410-479)||(17925189-17925258)
chr5 (435-495)||(21542028-21542088)
chr5 (408-495)||(3966474-3966561)
chr5 (421-488)||(4105241-4105310)
chr5 (436-490)||(12159951-12160005)
chr5 (432-470)||(18316951-18316989)
chr5 (421-495)||(19579685-19579759)
chr5 (424-490)||(24906307-24906373)
chr5 (421-495)||(37328845-37328919)
chr5 (421-490)||(17177029-17177098)
chr5 (412-481)||(30098301-30098370)
chr5 (421-469)||(6770527-6770575)
chr5 (421-469)||(19552570-19552618)
chr5 (435-495)||(30183547-30183607)
chr5 (444-488)||(43001807-43001851)
[»] chr6 (34 HSPs)
chr6 (402-495)||(7801157-7801250)
chr6 (388-507)||(12696277-12696394)
chr6 (388-495)||(28715243-28715353)
chr6 (424-490)||(1681745-1681811)
chr6 (421-495)||(9107371-9107445)
chr6 (421-495)||(15489733-15489807)
chr6 (421-495)||(34595118-34595192)
chr6 (422-495)||(10770675-10770748)
chr6 (422-495)||(16766682-16766755)
chr6 (421-525)||(426490-426589)
chr6 (388-488)||(8776981-8777086)
chr6 (423-490)||(16833294-16833361)
chr6 (421-495)||(8365520-8365594)
chr6 (424-495)||(17302543-17302615)
chr6 (430-525)||(2117069-2117163)
chr6 (421-487)||(17841598-17841664)
chr6 (421-495)||(28152083-28152156)
chr6 (424-490)||(31959146-31959212)
chr6 (430-495)||(853860-853925)
chr6 (430-495)||(7977831-7977896)
chr6 (440-489)||(31384923-31384972)
chr6 (435-490)||(1191706-1191761)
chr6 (430-495)||(4877935-4878001)
chr6 (402-495)||(7027206-7027300)
chr6 (422-496)||(7938101-7938175)
chr6 (445-488)||(4118341-4118384)
chr6 (402-481)||(34225824-34225906)
chr6 (421-495)||(3398603-3398676)
chr6 (421-495)||(7930289-7930363)
chr6 (444-490)||(9522898-9522944)
chr6 (430-495)||(33001290-33001355)
chr6 (436-484)||(5970120-5970168)
chr6 (437-481)||(24115862-24115906)
chr6 (430-490)||(30866150-30866210)
[»] chr7 (35 HSPs)
chr7 (410-502)||(9408328-9408420)
chr7 (424-489)||(35861951-35862016)
chr7 (431-495)||(3991318-3991382)
chr7 (421-495)||(11061077-11061151)
chr7 (421-495)||(18215187-18215261)
chr7 (388-490)||(24105631-24105731)
chr7 (421-506)||(13770675-13770760)
chr7 (430-495)||(24339635-24339700)
chr7 (435-495)||(7438704-7438764)
chr7 (402-506)||(9778462-9778569)
chr7 (430-488)||(25481895-25481953)
chr7 (421-495)||(27945025-27945099)
chr7 (422-507)||(5409825-5409910)
chr7 (430-487)||(8234139-8234196)
chr7 (424-507)||(32094009-32094093)
chr7 (388-495)||(43027470-43027576)
chr7 (408-495)||(11665441-11665528)
chr7 (424-495)||(33994199-33994270)
chr7 (408-486)||(11831404-11831481)
chr7 (444-490)||(26033467-26033513)
chr7 (430-495)||(7197298-7197363)
chr7 (423-495)||(6630913-6630985)
chr7 (430-502)||(25822648-25822720)
chr7 (435-495)||(11272587-11272649)
chr7 (423-469)||(29763201-29763247)
chr7 (421-491)||(43249977-43250047)
chr7 (273-323)||(48522878-48522928)
chr7 (423-468)||(21826259-21826304)
chr7 (440-488)||(7058429-7058477)
chr7 (421-469)||(10042921-10042969)
chr7 (423-502)||(21560484-21560568)
chr7 (421-481)||(29787384-29787444)
chr7 (430-490)||(40287363-40287422)
chr7 (271-323)||(46392597-46392649)
chr7 (451-495)||(48438560-48438604)
[»] chr1 (49 HSPs)
chr1 (415-489)||(32434723-32434798)
chr1 (388-495)||(38078662-38078769)
chr1 (408-495)||(37598803-37598889)
chr1 (423-495)||(22881617-22881689)
chr1 (412-495)||(31672896-31672979)
chr1 (432-495)||(40258934-40258997)
chr1 (421-495)||(1704993-1705067)
chr1 (437-495)||(24577187-24577245)
chr1 (437-501)||(28273083-28273147)
chr1 (421-496)||(1815241-1815316)
chr1 (408-495)||(46348384-46348470)
chr1 (430-488)||(113292-113350)
chr1 (437-507)||(1486698-1486768)
chr1 (408-486)||(18556466-18556543)
chr1 (430-488)||(32461471-32461529)
chr1 (421-495)||(42359450-42359524)
chr1 (388-481)||(398780-398878)
chr1 (403-495)||(24334706-24334799)
chr1 (430-490)||(21378571-21378631)
chr1 (423-495)||(47989484-47989555)
chr1 (432-495)||(6332666-6332728)
chr1 (437-495)||(18190109-18190167)
chr1 (437-495)||(22515888-22515946)
chr1 (421-525)||(48450562-48450662)
chr1 (446-495)||(18337338-18337387)
chr1 (421-502)||(38503304-38503385)
chr1 (435-495)||(51410022-51410083)
chr1 (438-490)||(31015044-31015096)
chr1 (421-481)||(34298420-34298480)
chr1 (435-489)||(6427459-6427516)
chr1 (430-489)||(14359529-14359587)
chr1 (423-490)||(30359374-30359441)
chr1 (272-323)||(36033560-36033611)
chr1 (423-481)||(2288182-2288240)
chr1 (421-495)||(5376501-5376575)
chr1 (445-495)||(6612172-6612222)
chr1 (388-491)||(3490395-3490497)
chr1 (444-489)||(5927347-5927392)
chr1 (411-480)||(9828019-9828087)
chr1 (154-203)||(16119091-16119140)
chr1 (430-495)||(19058857-19058922)
chr1 (153-242)||(21623678-21623767)
chr1 (408-507)||(35919265-35919370)
chr1 (402-495)||(36878427-36878519)
chr1 (440-488)||(2283669-2283717)
chr1 (421-481)||(6427334-6427394)
chr1 (421-469)||(9103624-9103672)
chr1 (421-469)||(16812527-16812575)
chr1 (437-495)||(17778549-17778604)
[»] chr8 (35 HSPs)
chr8 (20-160)||(37743830-37743977)
chr8 (421-495)||(22651960-22652034)
chr8 (408-488)||(36450762-36450841)
chr8 (416-487)||(30271300-30271371)
chr8 (421-495)||(15816130-15816204)
chr8 (426-495)||(4298887-4298956)
chr8 (388-495)||(25566789-25566899)
chr8 (436-495)||(29447111-29447170)
chr8 (421-495)||(18170483-18170557)
chr8 (421-495)||(18634051-18634125)
chr8 (423-489)||(22197749-22197815)
chr8 (425-495)||(24613509-24613578)
chr8 (442-495)||(4948657-4948710)
chr8 (422-495)||(13436965-13437038)
chr8 (421-490)||(25192353-25192422)
chr8 (421-490)||(29510310-29510379)
chr8 (436-495)||(2572057-2572116)
chr8 (432-495)||(8342967-8343030)
chr8 (430-489)||(8343309-8343368)
chr8 (421-495)||(5813576-5813650)
chr8 (421-495)||(20873053-20873127)
chr8 (413-488)||(21465391-21465463)
chr8 (424-488)||(22595981-22596045)
chr8 (435-491)||(41831945-41832001)
chr8 (435-490)||(18407717-18407772)
chr8 (444-495)||(28745505-28745556)
chr8 (425-495)||(31556985-31557054)
chr8 (444-489)||(30077394-30077439)
chr8 (146-194)||(9706796-9706844)
chr8 (436-488)||(17468516-17468568)
chr8 (421-465)||(24196628-24196672)
chr8 (430-490)||(31236583-31236643)
chr8 (421-481)||(36934654-36934714)
chr8 (446-490)||(40332200-40332244)
chr8 (423-491)||(44067502-44067570)
[»] scaffold0011 (1 HSPs)
scaffold0011 (410-496)||(17749-17835)
[»] chr2 (34 HSPs)
chr2 (388-489)||(21374706-21374807)
chr2 (408-495)||(37558949-37559035)
chr2 (20-115)||(34694427-34694524)
chr2 (20-115)||(34716839-34716936)
chr2 (421-525)||(19536373-19536473)
chr2 (421-495)||(15657848-15657922)
chr2 (421-495)||(30717531-30717605)
chr2 (421-495)||(15972857-15972931)
chr2 (138-208)||(16021964-16022034)
chr2 (421-495)||(18421947-18422021)
chr2 (421-495)||(30335401-30335475)
chr2 (421-490)||(6940239-6940308)
chr2 (422-495)||(18841014-18841087)
chr2 (421-525)||(20539644-20539749)
chr2 (421-490)||(23718010-23718079)
chr2 (421-490)||(24105682-24105751)
chr2 (421-490)||(30404856-30404925)
chr2 (435-495)||(20473320-20473380)
chr2 (436-495)||(974746-974805)
chr2 (408-487)||(37419714-37419793)
chr2 (437-495)||(2438720-2438778)
chr2 (402-495)||(26769471-26769569)
chr2 (430-495)||(12668424-12668489)
chr2 (437-490)||(12940941-12940994)
chr2 (423-488)||(38117167-38117232)
chr2 (423-495)||(36756345-36756417)
chr2 (435-495)||(5040730-5040792)
chr2 (180-262)||(14117731-14117814)
chr2 (388-506)||(14996213-14996330)
chr2 (421-495)||(23058443-23058518)
chr2 (437-495)||(11223864-11223922)
chr2 (423-488)||(29176501-29176566)
chr2 (421-489)||(21091707-21091775)
chr2 (269-321)||(33599016-33599068)
[»] chr4 (40 HSPs)
chr4 (421-525)||(30298930-30299036)
chr4 (421-525)||(30327798-30327904)
chr4 (430-507)||(12895105-12895182)
chr4 (436-495)||(24613702-24613761)
chr4 (410-488)||(11596360-11596438)
chr4 (421-495)||(12797339-12797412)
chr4 (421-495)||(23292987-23293061)
chr4 (413-490)||(24543957-24544035)
chr4 (437-495)||(54580024-54580082)
chr4 (423-488)||(19482654-19482719)
chr4 (423-488)||(40481623-40481687)
chr4 (435-507)||(3947755-3947827)
chr4 (435-495)||(21945501-21945561)
chr4 (145-231)||(51978594-51978683)
chr4 (427-488)||(715615-715677)
chr4 (427-488)||(752941-753003)
chr4 (402-495)||(4157112-4157207)
chr4 (423-489)||(14126118-14126184)
chr4 (444-490)||(29205451-29205497)
chr4 (421-495)||(35157986-35158060)
chr4 (430-495)||(2361976-2362041)
chr4 (438-483)||(14465088-14465133)
chr4 (444-489)||(28964255-28964300)
chr4 (388-469)||(32273553-32273633)
chr4 (421-489)||(4383352-4383419)
chr4 (410-470)||(11110708-11110768)
chr4 (415-495)||(16073373-16073452)
chr4 (421-491)||(20633469-20633536)
chr4 (430-489)||(28084514-28084574)
chr4 (430-490)||(31800484-31800544)
chr4 (435-495)||(34306805-34306864)
chr4 (430-489)||(38847019-38847078)
chr4 (421-495)||(49431009-49431084)
chr4 (422-488)||(27706185-27706251)
chr4 (445-490)||(6485617-6485662)
chr4 (430-495)||(12895275-12895340)
chr4 (409-488)||(37203239-37203315)
chr4 (144-203)||(3929573-3929630)
chr4 (421-481)||(36635308-36635368)
chr4 (432-488)||(51701253-51701309)
[»] chr3 (44 HSPs)
chr3 (408-502)||(34910289-34910382)
chr3 (424-495)||(10954939-10955010)
chr3 (421-495)||(10335287-10335361)
chr3 (421-495)||(55401059-55401133)
chr3 (424-488)||(4987299-4987363)
chr3 (430-489)||(14209106-14209165)
chr3 (423-490)||(20503451-20503518)
chr3 (421-495)||(8587022-8587096)
chr3 (410-495)||(25775481-25775567)
chr3 (421-495)||(28917985-28918059)
chr3 (388-489)||(14216845-14216944)
chr3 (388-489)||(14222974-14223073)
chr3 (403-495)||(21479079-21479176)
chr3 (444-525)||(25948858-25948939)
chr3 (437-490)||(26508110-26508163)
chr3 (430-495)||(28812508-28812573)
chr3 (388-495)||(39756188-39756294)
chr3 (435-504)||(49651778-49651847)
chr3 (410-466)||(10318064-10318119)
chr3 (388-485)||(14747513-14747610)
chr3 (423-495)||(14829676-14829747)
chr3 (423-495)||(16000017-16000089)
chr3 (410-481)||(21305218-21305290)
chr3 (435-491)||(35994743-35994798)
chr3 (432-495)||(1509534-1509597)
chr3 (422-489)||(10268493-10268560)
chr3 (430-489)||(14832092-14832151)
chr3 (432-495)||(51206354-51206417)
chr3 (437-525)||(21256960-21257045)
chr3 (432-525)||(7928445-7928533)
chr3 (412-469)||(8412972-8413029)
chr3 (403-489)||(32400715-32400798)
chr3 (423-495)||(41961651-41961723)
chr3 (436-495)||(750619-750678)
chr3 (421-495)||(15796295-15796369)
chr3 (421-491)||(24205046-24205116)
chr3 (421-495)||(26492206-26492280)
chr3 (423-469)||(40052318-40052364)
chr3 (435-480)||(14979179-14979224)
chr3 (430-495)||(34185124-34185189)
chr3 (436-488)||(3164033-3164085)
chr3 (422-490)||(17005625-17005693)
chr3 (435-495)||(27505244-27505304)
chr3 (430-490)||(29508437-29508497)
[»] scaffold0103 (1 HSPs)
scaffold0103 (421-488)||(51795-51862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (430-487)||(14523-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (421-489)||(178825-178894)
[»] scaffold0223 (1 HSPs)
scaffold0223 (421-489)||(20156-20224)
[»] scaffold0306 (1 HSPs)
scaffold0306 (421-495)||(13384-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (421-495)||(21869-21943)
[»] scaffold0027 (1 HSPs)
scaffold0027 (388-525)||(46628-46764)
[»] scaffold0007 (1 HSPs)
scaffold0007 (421-491)||(225273-225343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (423-488)||(19562-19626)
[»] scaffold0122 (1 HSPs)
scaffold0122 (430-495)||(8003-8067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (408-495)||(23740-23828)
[»] scaffold0793 (1 HSPs)
scaffold0793 (427-488)||(4891-4953)
[»] scaffold0652 (1 HSPs)
scaffold0652 (421-495)||(463-537)
[»] scaffold0053 (1 HSPs)
scaffold0053 (421-495)||(8782-8856)
[»] scaffold0311 (1 HSPs)
scaffold0311 (421-458)||(10509-10546)
[»] scaffold0004 (1 HSPs)
scaffold0004 (421-489)||(92791-92859)
[»] scaffold0171 (1 HSPs)
scaffold0171 (388-507)||(23373-23490)
[»] scaffold0021 (1 HSPs)
scaffold0021 (435-490)||(130480-130535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (430-488)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (430-484)||(33375-33429)
[»] scaffold0003 (1 HSPs)
scaffold0003 (421-495)||(241578-241652)
[»] scaffold0187 (1 HSPs)
scaffold0187 (270-323)||(4567-4620)
[»] scaffold0450 (1 HSPs)
scaffold0450 (435-495)||(8636-8696)
[»] scaffold0136 (1 HSPs)
scaffold0136 (445-489)||(3856-3900)
[»] scaffold0062 (1 HSPs)
scaffold0062 (269-309)||(332-372)
[»] scaffold0020 (1 HSPs)
scaffold0020 (423-495)||(135313-135385)


Alignment Details
Target: chr5 (Bit Score: 392; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 20 - 525
Target Start/End: Original strand, 10298171 - 10298657
Alignment:
Q  20 cagtgtagttctccaaaagagcatatagcagaaaatcaaatgattttttatacaactctgtacgaaataaaaaggccatcatagtcaacaggtaaaaata 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  10298171 cagtgtagttctccaaaagagcatatagcagaaaatcaaatgattttttatacaactttgttcgaaataaaaaggtcatcatagtcaacaggtaaaaata 10298270  T
Q  120 ttccgtccgttccttcttattgtcgttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcatttctttttctatt 219  Q
     |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298271 ctccgtccgttccttcttattgttgttttaatattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcatttctttttctatt 10298370  T
Q  220 atacccttaactttttattatcttgttctatctacttatctctttgcaatattgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaata 319  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298371 atacccttaactttttattatcttgttctatctacttatccctttgcaatattgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaata 10298470  T
Q  320 aatatgaaagaattcttgtgcagaagcgacacttaaaaaggaatgaggatttgagagggagtatgaccatgaagcacggatgcggatgcggacacggaca 419  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||                      
T  10298471 aatatgaaagaattcttctgcagaagcgacacttaaaaaggaatgaggattggagagggagtatgaccatgaagcacggatg------------------ 10298552  T
Q  420 ccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagg 519  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  10298553 -cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacgcctaatccgagg 10298651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 10290052 - 10290200
Alignment:
Q  22 gtgtagttctccaaaagagcatatagcagaaaatcaaatgattttttatacaac---tctgtacgaaataaaaaggccatcatagtcaacaggtaaaaat 118  Q
    |||||||||||| ||||||||| ||||||||||||||||||   ||||||||||   |||||| |||||| ||||| |||||| ||||||||| ||||||    
T  10290052 gtgtagttctcctaaagagcatgtagcagaaaatcaaatgaccgtttatacaacacctctgtatgaaatataaaggtcatcatggtcaacaggcaaaaat 10290151  T
Q  119 attccgtccgttccttcttattgtcgttttaagattatttacacataat 167  Q
    | | ||| |||||||| ||||| ||||||||| ||||||||||||||||    
T  10290152 agtacgttcgttcctttttattttcgttttaaaattatttacacataat 10290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 9747218 - 9747143
Alignment:
Q  269 tattgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaatatgaaagaattcttgtgcagaa 344  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||    
T  9747218 tattgacaaaataatagttaatgttgcattaaaatttaaaaacgacaaataagtatgaacgaattcttctgcagaa 9747143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 9747460 - 9747365
Alignment:
Q  20 cagtgtagttctccaaaagagcatatagcagaaaatcaaatgattttttatacaactctgtacgaaataaaaaggccatcatagtcaacaggtaaa 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| | |||| | |||||| ||||    
T  9747460 cagtgtagttctcctaaagagcatatagcagaaaatcaaatgattttttatacaactctgaatgaaatataaaggtcgtcatgggcaacagttaaa 9747365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 8419992 - 8420085
Alignment:
Q  402 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| ||||||||||||||||||| | |||| |||||| | |||||||||||||||| | ||||||| |||||||||||||||||||| ||||    
T  8419992 cggatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtc 8420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 21351979 - 21351906
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 31084309 - 31084393
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 507  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||| | |||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg 31084393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 370
Target Start/End: Original strand, 10290202 - 10290264
Alignment:
Q  308 aaacaacaaataaatatgaaagaattcttgtgcagaagcgacacttaaaaaggaatgaggatt 370  Q
    |||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  10290202 aaacaacaaataaatatgaacgaattcttatgcagaagcgacatttaaaaaggaatgaggatt 10290264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 9747320 - 9747249
Alignment:
Q  187 gttacttttgatgaaatcatttctttttctattatacccttaactttttattatcttgttctatctacttatc 259  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||    
T  9747320 gttacttttgatgaaattatttctttttctataatacccttaa-tttttattatcttgttccatctatttatc 9747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 42893353 - 42893418
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  42893353 acacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 6247609 - 6247680
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 21191131 - 21191057
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||  |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21191131 cggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 21191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 14674253 - 14674322
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | |||||||||||||||||    
T  14674253 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 432 - 489
Target Start/End: Complemental strand, 15405119 - 15405062
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  15405119 acactgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 524
Target Start/End: Complemental strand, 13287474 - 13287366
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg-----ttgtcctatcggacacgtctaatcc 515  Q
    |||||||||||||  |||||||  ||||||||||||||| ||||||||| || ||||| |||||||||||      |||||| ||||||||| ||||||     
T  13287474 cggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtcctgtcggacacgcctaatct 13287375  T
Q  516 gaggagtgt 524  Q
    |||||||||    
T  13287374 gaggagtgt 13287366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 39698525 - 39698593
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  39698525 cggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 41995457 - 41995515
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    |||||| |||| |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  41995457 gacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 495
Target Start/End: Complemental strand, 21576803 - 21576746
Alignment:
Q  438 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 21576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 33178018 - 33178083
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||||||||||||| ||||| |||||||||  | ||||||||||||||||| ||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 33178083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 502
Target Start/End: Original strand, 41633728 - 41633800
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 502  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||| ||||| |||| ||||||    
T  41633728 acactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcgg 41633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 5894897 - 5894823
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 506  Q
    |||| ||||||||||||||||||||||| ||| |||||  ||| ||| ||||||||||| |||| | ||||||||    
T  5894897 acacggacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacac 5894823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 21522734 - 21522808
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21522734 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 21533300 - 21533374
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21533300 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 30135306 - 30135372
Alignment:
Q  430 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||||||||||||||| ||||| ||||||||  || ||||||||||||||||| ||||    
T  30135306 acacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 495
Target Start/End: Original strand, 7677702 - 7677763
Alignment:
Q  434 accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||| |||||||||||||||| ||||||||| || || ||||| |||||||| ||||    
T  7677702 accgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtc 7677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 479
Target Start/End: Complemental strand, 17925258 - 17925189
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaat 479  Q
    ||||||||||||||||||| ||| ||||||  || ||||||||| | ||| ||||||||| |||||||||    
T  17925258 gacacggacaccggacactgacataccgacctaaataataatttaagaaaatcacataattcaatgtaat 17925189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 21542028 - 21542088
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  21542028 ccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 21542088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 495
Target Start/End: Original strand, 3966474 - 3966561
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| ||||||| |||  |||||||  |||||||||||| ||| ||||| ||| || |||||||| | |||||| ||||    
T  3966474 cggacacggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 4105241 - 4105310
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaa--gtcacataatacaatgtaattacaagtgt 488  Q
    |||| ||| |||| |||||| ||||||||||||||||||   ||||||||| || |||||||||||||||    
T  4105241 cggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 490
Target Start/End: Original strand, 12159951 - 12160005
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||||||||||||| |||||  ||||||||  ||||||||||||| |||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcg 12160005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 470
Target Start/End: Complemental strand, 18316989 - 18316951
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataata 470  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  18316989 acaccgacacaactaataattttaaaaaatcacataata 18316951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 19579685 - 19579759
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| | || |||||||| |||||||||||| ||| |||||||||  | || |||||||||||||| ||||    
T  19579685 cggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtc 19579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 490
Target Start/End: Complemental strand, 24906373 - 24906307
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||| |||| || |||||  ||||||||||||||| | ||||||| || |||||||||||||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 37328919 - 37328845
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| | ||||||||||| | ||||||||| |||| ||||| ||| || |||||||||| |||||| ||||    
T  37328919 cggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtc 37328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 490
Target Start/End: Complemental strand, 17177098 - 17177029
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| | || || ||||| |||||||||||||||| ||| | ||| || |||||||||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 30098301 - 30098370
Alignment:
Q  412 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    ||||||||||||||||| ||||  ||| ||   ||||||||||| ||| ||||||||| |||||||||||    
T  30098301 cacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaatta 30098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 6770527 - 6770575
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||||| |||||| ||||||||||||||||| | ||| |||||||||    
T  6770527 cggacactgacacactgacacaactaataatttaagaaaatcacataat 6770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 19552618 - 19552570
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  19552618 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 19552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 30183547 - 30183607
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||||||||  |||||| || |  | ||||||||||||||| ||||    
T  30183547 ccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtc 30183607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 488
Target Start/End: Original strand, 43001807 - 43001851
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||||||||||| | ||||||| || |||||||||||||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 7801250 - 7801157
Alignment:
Q  402 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  7801250 cggatacggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 7801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 507
Target Start/End: Original strand, 12696277 - 12696394
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    ||||||||||||| ||||  |||||||| |||| ||||||| |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||    
T  12696277 atgaagcacggatacggacacggacacg-acac-ggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtg 12696374  T
Q  488 tcgttgtcctatcggacacg 507  Q
    ||  |||| | |||||||||    
T  12696375 tcagtgtcgtgtcggacacg 12696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 388 - 495
Target Start/End: Original strand, 28715243 - 28715353
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 484  Q
    ||||||||||||| ||||| |||||||||||||||||||| | ||  |||| |||||  |||||||||||||||| | ||||||| || |||||||||||    
T  28715243 atgaagcacggatacggatacggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaa 28715342  T
Q  485 gtgtcgttgtc 495  Q
    |||||| ||||    
T  28715343 gtgtcggtgtc 28715353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 424 - 490
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||| || |||||||||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 9107445 - 9107371
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  9107445 cggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 9107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 15489807 - 15489733
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| ||||    
T  15489807 cggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 34595118 - 34595192
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| | |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  34595118 cggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 34595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 10770748 - 10770675
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| |||| || |||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 10770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 16766682 - 16766755
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 525
Target Start/End: Complemental strand, 426589 - 426490
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 520  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||     ||||||||| |||||| |||||    
T  426589 cggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtg-----tcggacacgcctaatctgagga 426495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 488
Target Start/End: Complemental strand, 8777086 - 8776981
Alignment:
Q  388 atgaagcacggatgcggatgcggaca-cggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 482  Q
    ||||||||||||| ||||  |||||| |||||||    |||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||    
T  8777086 atgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattac 8776987  T
Q  483 aagtgt 488  Q
    ||||||    
T  8776986 aagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 16833294 - 16833361
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 8365594 - 8365520
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||||||| |  ||||||||||||||||| ||||    
T  8365594 cggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtc 8365520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 17302543 - 17302615
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||| | |||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||    
T  17302543 acactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtc 17302615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 525
Target Start/End: Original strand, 2117069 - 2117163
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtc 525  Q
    |||| |||||||  |||||||||||||||| ||||||||| ||||| ||||| |||||||| |||| | ||||||| | |||||| ||||||||||    
T  2117069 acactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg-tgtcgtgtcggacatgcctaatcggaggagtgtc 2117163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 17841664 - 17841598
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||    
T  17841664 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 28152083 - 28152156
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28152083 cggacactgacacgccgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 28152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 490
Target Start/End: Original strand, 31959146 - 31959212
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||| |||| ||| |||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 853925 - 853860
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  853925 acacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 7977896 - 7977831
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 7977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 31384923 - 31384972
Alignment:
Q  440 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 490
Target Start/End: Complemental strand, 1191761 - 1191706
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||    
T  1191761 ccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 4877935 - 4878001
Alignment:
Q  430 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| ||||||||||| |||||||||||||||  | | ||||||||||||||| ||||    
T  4877935 acacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtc 4878001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 7027206 - 7027300
Alignment:
Q  402 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||||||||||| |||||||||| || |||||||  || |||||||| ||||| ||||||||| || |||||||| | |||||| ||||    
T  7027206 cggatacggacacggacatcggacactaatacgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 496
Target Start/End: Original strand, 7938101 - 7938175
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 496  Q
    ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | |||||||| |||||||| |||||    
T  7938101 ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtcc 7938175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 488
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  445 taataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||||||||||||| |||||||||  |||||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 481
Target Start/End: Complemental strand, 34225906 - 34225824
Alignment:
Q  402 cggatgcggacacggacaccggacac--taac-acaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    ||||| ||||||||||||| ||||||  |||  |||| ||||||||||||||||||||||| || |||||| || ||||||||    
T  34225906 cggatacggacacggacactggacacgataaggacactgacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 3398603 - 3398676
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| ||||| || |||||||| |||| ||| ||||    
T  3398603 cggacactgacacgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtc 3398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 7930289 - 7930363
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||  ||||||||| ||||||||||||||| |||||||||  | || |||| ||||||||| ||||    
T  7930289 cggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtc 7930363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||||| ||||| ||||||||| || |||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 33001355 - 33001290
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||  |||||||||||||||| |||||||||  |||||||||| | |||||| ||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtc 33001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 484
Target Start/End: Complemental strand, 5970168 - 5970120
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 484  Q
    |||||||  ||||||||||||||| ||||||||| || |||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 481
Target Start/End: Complemental strand, 24115906 - 24115862
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    ||||||||||||||||| ||||| ||||||||| |||| ||||||    
T  24115906 gacacaactaataatttcaaaaaatcacataattcaatataatta 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 30866210 - 30866150
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||| ||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  30866210 acacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 410 - 502
Target Start/End: Complemental strand, 9408420 - 9408328
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 502  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||| |||| ||||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 424 - 489
Target Start/End: Original strand, 35861951 - 35862016
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtc 35862016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 431 - 495
Target Start/End: Original strand, 3991318 - 3991382
Alignment:
Q  431 cacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 3991382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 11061151 - 11061077
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||  | | ||||||||||||||| ||||    
T  11061151 cggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 18215261 - 18215187
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| ||||| || |||||||||||||||| ||||||||| || |||| |||||||||||| ||||    
T  18215261 cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtc 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 490
Target Start/End: Original strand, 24105631 - 24105731
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    ||||||||||||| ||||| |||||||| |||| ||||||| |||| |||||||| |||||||||||||||| |  ||| || || ||||||||||||||    
T  24105631 atgaagcacggatacggatacggacacg-acac-ggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtg 24105728  T
Q  488 tcg 490  Q
    |||    
T  24105729 tcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 506
Target Start/End: Original strand, 13770675 - 13770760
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 506  Q
    |||||||| | || |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||||||||| | ||||||||    
T  13770675 cggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacac 13770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 24339635 - 24339700
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 7438704 - 7438764
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  7438704 ccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 506
Target Start/End: Original strand, 9778462 - 9778569
Alignment:
Q  402 cggatgcggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtccta 498  Q
    ||||| |||||||||||||||||||| | ||  |||| |||||| || ||||||||||||| ||||||||| || | ||||||||||||||| |||| |     
T  9778462 cggatacggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtg 9778561  T
Q  499 tcggacac 506  Q
    ||||||||    
T  9778562 tcggacac 9778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 488
Target Start/End: Original strand, 25481895 - 25481953
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 27945025 - 27945099
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||| ||||||||||||| ||| | ||||||| || ||||||||||||||||| ||||    
T  27945025 cggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 27945099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 507
Target Start/End: Complemental strand, 5409910 - 5409825
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 507  Q
    ||||||| |||| | || ||| |||||||||||||||| ||||||||| || || |||||||||||||| |||| | |||||||||    
T  5409910 ggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg 5409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 8234139 - 8234196
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    |||||||||||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  8234139 acacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 507
Target Start/End: Complemental strand, 32094093 - 32094009
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 507  Q
    |||||||||  || ||||||||||||||||||||||  ||||||||| || ||||||||||| ||||| |||| | |||||||||    
T  32094093 acactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacg 32094009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 43027576 - 43027470
Alignment:
Q  388 atgaagcacggatgcggatgc-ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    ||||||||||||||||||  | |||||| |||| |||||||| ||||  |||| || |||||||||||||||| ||||||||| || ||||| |||||||    
T  43027576 atgaagcacggatgcggacactggacac-gaca-cggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagt 43027479  T
Q  487 gtcgttgtc 495  Q
    |||| ||||    
T  43027478 gtcggtgtc 43027470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 495
Target Start/End: Complemental strand, 11665528 - 11665441
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| ||| | | |||| | ||||||||||||||||||||||| ||||||||| || | |||||| |||||||| ||||    
T  11665528 cggatacggacactggatattgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 33994199 - 33994270
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||| ||||| |||||| ||||||||||| |||||||||| || || |||||||||||||| ||||    
T  33994199 acactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 11831404 - 11831481
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    |||| |||||||| |||||| | |||| |||||||||||||||||||||||| ||| |||||  | |||||||||||||    
T  11831404 cggatacggacactggacacga-cacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 490
Target Start/End: Complemental strand, 26033513 - 26033467
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 7197363 - 7197298
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| |||||||||| ||||| |||  |||| |||||||||||||||||||| ||||    
T  7197363 acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtc 7197298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 6630985 - 6630913
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| ||||||| ||||||||||||| |||||||| |||| || |||||||| | |||||| ||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtc 6630913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 502
Target Start/End: Original strand, 25822648 - 25822720
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 502  Q
    |||| |||||||||||||||||||||||||    || ||| || ||||||||||||||||| |||| ||||||    
T  25822648 acacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcgg 25822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 11272649 - 11272587
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcac--ataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||| ||||||||||||| ||||  ||||| || ||||||||||||||||| ||||    
T  11272649 ccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtc 11272587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 29763247 - 29763201
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  29763247 gacactgacacaccaacacaacttataatttgaaaaaatcacataat 29763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 43249977 - 43250047
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  43249977 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 43250047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 48522928 - 48522878
Alignment:
Q  273 gacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 323  Q
    |||||||||||| |||||||||||||||| ||||||||  | |||||||||    
T  48522928 gacaaaataataattaatgttgcattaaactttaaaaatgataaataaata 48522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 21826259 - 21826304
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataa 468  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  21826259 gacactaacacgccgacacgactaataatttaaaaaaatcacataa 21826304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 488
Target Start/End: Original strand, 7058429 - 7058477
Alignment:
Q  440 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||||||||||||||| |||  |||| || |||||||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 10042921 - 10042969
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||||| |||| ||||||| ||||||||||||| ||| |||||||||    
T  10042921 cggacacttacacgccgacaccactaataatttgataaattcacataat 10042969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 502
Target Start/End: Original strand, 21560484 - 21560568
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaa-----aaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 502  Q
    |||||| |||| |||| ||| |||||||||||||     ||| ||||||||| || ||||||||||||||||| |||| ||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcgg 21560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 29787444 - 29787384
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    |||||| |||||| |||||||  |||||||||||| ||| ||||||||| || ||||||||    
T  29787444 cggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 40287422 - 40287363
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||| |||||||||| |||||||||||||| ||| || || || |||||||||||||||||    
T  40287422 acacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcg 40287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 46392597 - 46392649
Alignment:
Q  271 ttgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 323  Q
    ||||||||||  |||||||||||||||| || ||| ||||| |||||||||||    
T  46392597 ttgacaaaatcctagttaatgttgcattgaactttgaaaacgacaaataaata 46392649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 495
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  451 tttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 489
Target Start/End: Complemental strand, 32434798 - 32434723
Alignment:
Q  415 ggacaccggacactaacac-accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  32434798 ggacaccggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 38078769 - 38078662
Alignment:
Q  388 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    ||||||||||||| ||||  ||||||| |||||| | ||||| ||||  ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  38078769 atgaagcacggatacggacacggacaccggacac-gaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagt 38078671  T
Q  487 gtcgttgtc 495  Q
    |||| ||||    
T  38078670 gtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 495
Target Start/End: Original strand, 37598803 - 37598889
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||| |||||||| ||||    
T  37598803 cggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtc 37598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 22881689 - 22881617
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 412 - 495
Target Start/End: Complemental strand, 31672979 - 31672896
Alignment:
Q  412 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| || ||||||| ||||||||||||| |||||||||||||||| |||| |||| || ||||||||||||| ||| ||||    
T  31672979 cacggatacgggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc 31672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 432 - 495
Target Start/End: Complemental strand, 40258997 - 40258934
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 1705067 - 1704993
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||  ||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  1705067 cggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtc 1704993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 24577245 - 24577187
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 437 - 501
Target Start/End: Complemental strand, 28273147 - 28273083
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 501  Q
    |||||||||||| |||||||||| ||| ||||| || ||||||||||||||||| ||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcg 28273083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 496
Target Start/End: Original strand, 1815241 - 1815316
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 496  Q
    |||||||| |||| ||||||||| |||| |||| ||||| ||||||||| || ||||||||||||||||| |||||    
T  1815241 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtcc 1815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 495
Target Start/End: Complemental strand, 46348470 - 46348384
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  46348470 cggatacggacac-ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 46348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 488
Target Start/End: Original strand, 113292 - 113350
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 437 - 507
Target Start/End: Complemental strand, 1486768 - 1486698
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 507  Q
    |||||| |||||||||||||||| ||||||||| || |||||||| |||||||| |||| | |||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg 1486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 486
Target Start/End: Complemental strand, 18556543 - 18556466
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    |||| |||||||| ||||||| |||| |||||||| |||||||||||||||  |||||||||  |||||||||||||||    
T  18556543 cggatacggacac-ggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 32461529 - 32461471
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||| ||| ||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  32461529 acacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 42359524 - 42359450
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  42359524 cggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 42359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 398878 - 398780
Alignment:
Q  388 atgaagcacggatgcggatgcggacac-ggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    ||||||||||||| |||| |||||||| ||||||    |||||||| |||| |||||||  |||||||||||||||| ||||||||| || ||||||||    
T  398878 atgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 24334799 - 24334706
Alignment:
Q  403 ggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||     |||||| || ||||||||||||||||| ||||    
T  24334799 ggatacggacacggacaccggacacggacacaccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtc 24334706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 21378571 - 21378631
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||||||| ||||||| |||||||| | ||||||| || |||||||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 47989484 - 47989555
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| ||||||||| ||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  47989484 gacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 47989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 495
Target Start/End: Original strand, 6332666 - 6332728
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  6332666 acacggacacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtatcggtgtc 6332728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 18190167 - 18190109
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 22515946 - 22515888
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 525
Target Start/End: Complemental strand, 48450662 - 48450562
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 520  Q
    |||||||| |||| || ||||| |||||||||||||||| | |||||||  | |||||||||||||||||  | |  |  ||||||||||||||||||||    
T  48450662 cggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg--gac--acaggacacgtctaatccgagga 48450567  T
Q  521 gtgtc 525  Q
    |||||    
T  48450566 gtgtc 48450562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 495
Target Start/End: Original strand, 18337338 - 18337387
Alignment:
Q  446 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 18337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 502
Target Start/End: Original strand, 38503304 - 38503385
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 502  Q
    |||||||||||||||||||||  |||||||||||| ||| ||| ||| | || |||||||| | |||||| |||||| ||||    
T  38503304 cggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcgg 38503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 51410022 - 51410083
Alignment:
Q  435 ccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| ||||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  51410022 ccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 51410083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 490
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  438 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||| |||||||||||| ||| ||||||||| || |||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 34298420 - 34298480
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    |||| ||| |||||||||||| ||||||||||||| ||| ||||||||| || ||||||||    
T  34298420 cggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 489
Target Start/End: Original strand, 6427459 - 6427516
Alignment:
Q  435 ccgacacaactaataatttg---aaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    ||||||||||||||||||||   ||||| ||||||||| |||||||| ||||||||||    
T  6427459 ccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtc 6427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 14359587 - 14359529
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  14359587 acacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 30359374 - 30359441
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||| |||||||| ||||||| ||||||||||||| |||||||||  | ||||| | |||||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 36033611 - 36033560
Alignment:
Q  272 tgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 323  Q
    ||||||||||||||||||| ||| |||||| || |||||||| |||||||||    
T  36033611 tgacaaaataatagttaatattgaattaaatttaaaaaacaataaataaata 36033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 2288240 - 2288182
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    ||||||||||||||||||  | ||||||||| | ||| ||||||||| |||||||||||    
T  2288240 gacactaacacaccgacaacaataataatttaagaaaatcacataattcaatgtaatta 2288182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 5376575 - 5376501
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| |||||||  |||||||||| | ||| | ||||||| || |||||||| |||||||| ||||    
T  5376575 cggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtc 5376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 6612222 - 6612172
Alignment:
Q  445 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 6612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 3490497 - 3490395
Alignment:
Q  388 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    ||||||||||||| ||||| | ||||| ||||||  |||||| |||| |||||||  |||||||||||| |||   |||| || || |||||||||||||    
T  3490497 atgaagcacggatacggatacagacaccggacac--gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagt 3490400  T
Q  487 gtcgt 491  Q
    |||||    
T  3490399 gtcgt 3490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 5927392 - 5927347
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||||||||||| ||| |||||  ||||||||||||||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 480
Target Start/End: Original strand, 9828019 - 9828087
Alignment:
Q  411 acacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 480  Q
    |||| |||||||||||| | ||| ||||||| ||||||||||||| ||| ||||||||| || |||||||    
T  9828019 acacagacaccggacacga-cacgccgacaccactaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 16119140 - 16119091
Alignment:
Q  154 tatttacacataataagaaaactagtaaatttcgttacttttgatgaaat 203  Q
    ||||||||||||| |||||||  | ||||||| |||||||||||||||||    
T  16119140 tatttacacataacaagaaaaacattaaattttgttacttttgatgaaat 16119091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 19058922 - 19058857
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| |||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 19058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 21623767 - 21623678
Alignment:
Q  153 ttatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcatttctttttctattatacccttaactttttattatct 242  Q
    ||||||||||| |  ||||||||   ||||||| ||||||||||||||||   | ||||||||| | |||||||||| | ||||||||||    
T  21623767 ttatttacacaaaccaagaaaaccgataaattttgttacttttgatgaaagtgtgtctttttctttaatacccttaaatatttattatct 21623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 507
Target Start/End: Complemental strand, 35919370 - 35919265
Alignment:
Q  408 cggacacggacac-cggacactaacacaccgacacaactaataatttg-----aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 501  Q
    ||||||| ||||| ||||||| ||||| |||||||| |||||||||||     ||||| ||||||||| || |||||||| |||||||  |||| | |||    
T  35919370 cggacactgacacacggacaccaacactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcg 35919271  T
Q  502 gacacg 507  Q
    ||||||    
T  35919270 gacacg 35919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 36878427 - 36878519
Alignment:
Q  402 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| ||||||||||||  | ||||| |||| |||||||  |||||||||||| ||| ||||||||| || |||||||| | |||||| ||||    
T  36878427 cggatacggacacggacatag-acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 488
Target Start/End: Original strand, 2283669 - 2283717
Alignment:
Q  440 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||| ||||||||||||| |||||| || ||||||||||| ||||||    
T  2283669 acaacttataatttgaaaaaatcacatgattcaatgtaattataagtgt 2283717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 6427334 - 6427394
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    |||||||| |||| || ||||  |||||||||||| ||| ||||||||| |||||||||||    
T  6427334 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatta 6427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 9103624 - 9103672
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 9103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 469
Target Start/End: Original strand, 16812527 - 16812575
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||||| |||||||||||| | ||||||||||| ||| |||||||||    
T  16812527 cggacactgacacaccgacaccaataataatttgacaaaatcacataat 16812575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 495
Target Start/End: Original strand, 17778549 - 17778604
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||||||||||||||| ||||   ||||| ||||||||||||||||| ||||    
T  17778549 gacacagctaataatttgaaaaaatcac---atacagtgtaattacaagtgtcggtgtc 17778604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 37743977 - 37743830
Alignment:
Q  20 cagtgtagttctccaaaagagcatatagcagaaaatcaaatgatttttt--atacaactctgtacgaaataaaaaggccatcatagtcaacag-----gt 112  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||   |||||||||| | ||||||  |||| |||||| ||||||||      |    
T  37743977 cagtgtagttctcctaaagagcataaagcagaaaatcaaatgatttttttcttacaactctgaatgaaatatgaaggtcatcatggtcaacagttaaatt 37743878  T
Q  113 aaaaatattccgtccgttccttcttattgtcgttttaagattatttac 160  Q
    ||||||| | ||||| |||||| || ||||| ||||||||||||||||    
T  37743877 aaaaatacttcgtccattcctttttcttgtcattttaagattatttac 37743830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 22651960 - 22652034
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||| ||||    
T  22651960 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtc 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 408 - 488
Target Start/End: Complemental strand, 36450841 - 36450762
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||| |||||||| ||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  36450841 cggatacggacac-ggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 30271371 - 30271300
Alignment:
Q  416 gacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    ||||||||||||| |||| |||||||| ||||| |||||||||| ||||||||| || ||||||||||||||    
T  30271371 gacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 15816204 - 15816130
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||  | |||||||| |||||||| ||||    
T  15816204 cggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtc 15816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 495
Target Start/End: Complemental strand, 4298956 - 4298887
Alignment:
Q  426 actaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  4298956 actaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 388 - 495
Target Start/End: Original strand, 25566789 - 25566899
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacacta---acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 484  Q
    ||||||||||||| |||||   ||||| |||||||||||  |   | |||| |||||| |||||||||||||||| ||||||||| || |||||||||||    
T  25566789 atgaagcacggatacggatatagacacagacaccggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaa 25566888  T
Q  485 gtgtcgttgtc 495  Q
    |||||| ||||    
T  25566889 gtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 29447170 - 29447111
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 18170557 - 18170483
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18170557 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 18634125 - 18634051
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18634125 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 22197815 - 22197749
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 24613509 - 24613578
Alignment:
Q  425 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaaa-tcacataattaagtgtaattacaagtgtcggtgtc 24613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 4948657 - 4948710
Alignment:
Q  442 aactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 13437038 - 13436965
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| ||  ||||| |||||||||| ||||    
T  13437038 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtc 13436965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Complemental strand, 25192422 - 25192353
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||| |||||||| |||||||||||||||||| ||||||| || | |||||| ||||||||    
T  25192422 cggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Complemental strand, 29510379 - 29510310
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||    
T  29510379 cggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 2572116 - 2572057
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  2572116 cgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 2572057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 495
Target Start/End: Original strand, 8342967 - 8343030
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 8343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 8343309 - 8343368
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    ||||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||    
T  8343309 acacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 5813576 - 5813650
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||  |||| |||||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  5813576 cggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 5813650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 20873053 - 20873127
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||| |  ||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  20873053 cggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 20873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 21465391 - 21465463
Alignment:
Q  413 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||||||||||||| |   ||| |||||| |||||||||||||||| ||| ||||| | ||||||||||||||||    
T  21465391 acggacaccggacacga---cacggacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgt 21465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||| |||| |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 41832001 - 41831945
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    ||||||||  ||||||||||||||| ||||||||| || ||||| ||||||||||||    
T  41832001 ccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgt 41831945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 490
Target Start/End: Original strand, 18407717 - 18407772
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||||||||  ||||| ||||||||| || |||||||||||||||||    
T  18407717 ccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Original strand, 28745505 - 28745556
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||| ||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtc 28745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 31556985 - 31557054
Alignment:
Q  425 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||| ||||||||  ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  31556985 cactgacacgccgacacagttaataatttgaaaaa-tcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 30077439 - 30077394
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 9706844 - 9706796
Alignment:
Q  146 tttaagattatttacacataataagaaaactagtaaatttcgttacttt 194  Q
    |||||| |||||||||||||  |||||||| | ||||||||||||||||    
T  9706844 tttaaggttatttacacataccaagaaaaccaataaatttcgttacttt 9706796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 488
Target Start/End: Complemental strand, 17468568 - 17468516
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||||||| ||||||||| |||| ||||||||| |  |||||||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgt 17468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 24196672 - 24196628
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcaca 465  Q
    |||||||  |||| ||||||||||||||||||||||||| |||||    
T  24196672 cggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 31236643 - 31236583
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||| |||||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 36934654 - 36934714
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    |||||||||||||  ||||||  ||||||||| |||||| ||||||||| || ||||||||    
T  36934654 cggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 490
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  446 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 491
Target Start/End: Original strand, 44067502 - 44067570
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    |||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  44067502 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 44067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 410 - 496
Target Start/End: Complemental strand, 17835 - 17749
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 496  Q
    |||||||||| |||||| |||||| | ||||||||||||||||||||||| |||||||||  | ||||||||||||||||| |||||    
T  17835 gacacggacatcggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcc 17749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 489
Target Start/End: Complemental strand, 21374807 - 21374706
Alignment:
Q  388 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||| |||||||| |||||||||||||||| | ||||||| || |||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacac-ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagt 21374709  T
Q  487 gtc 489  Q
    |||    
T  21374708 gtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 495
Target Start/End: Original strand, 37558949 - 37559035
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||| ||||||| |||| |||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||    
T  37558949 cggatacggacac-ggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 34694427 - 34694524
Alignment:
Q  20 cagtgtagttctccaaaagagcatatagcagaaaatcaaatgatttttt--atacaactctgtacgaaataaaaaggccatcatagtcaacaggtaaa 115  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||   |||||||||| | ||||||  |||| |||||| |||||||| ||||    
T  34694427 cagtgtagttctcctaaagagcataaagcagaaaatcaaatgatttttttcttacaactctgaatgaaatatgaaggtcatcatggtcaacagttaaa 34694524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 34716839 - 34716936
Alignment:
Q  20 cagtgtagttctccaaaagagcatatagcagaaaatcaaatgatttttt--atacaactctgtacgaaataaaaaggccatcatagtcaacaggtaaa 115  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||   |||||||||| | ||||||  |||| |||||| |||||||| ||||    
T  34716839 cagtgtagttctcctaaagagcataaagcagaaaatcaaatgatttttttcttacaactctgaatgaaatatgaaggtcatcatggtcaacagttaaa 34716936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 421 - 525
Target Start/End: Complemental strand, 19536473 - 19536373
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagg 519  Q
    |||||| | |||| ||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||     ||||||||| |||||||||||    
T  19536473 cggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg-----tcggacacgcctaatccgagg 19536379  T
Q  520 agtgtc 525  Q
    ||||||    
T  19536378 agtgtc 19536373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 15657848 - 15657922
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||||||| || ||||||||||| ||||| ||||    
T  15657848 cggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtc 15657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 30717605 - 30717531
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| ||| ||||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  30717605 cggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 30717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 15972857 - 15972931
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||| ||||||||||||||| | ||| ||| || ||||||||||||||||| ||||    
T  15972857 cggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtc 15972931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 16022034 - 16021964
Alignment:
Q  138 attgtcgttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcattt 208  Q
    |||||||||||||||||||||||||||| | ||||||| | ||||||| ||||||||| ||| ||| ||||    
T  16022034 attgtcgttttaagattatttacacatactgagaaaaccaataaattttgttactttttatggaattattt 16021964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 18421947 - 18422021
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||| ||||||||| ||||  ||||||||| || ||||||||||||||||| ||||    
T  18421947 cggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtc 18422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 30335401 - 30335475
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||| ||| ||||||||||||||||||||||||| | |||||||  | ||||||||||| ||||| ||||    
T  30335401 cggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtc 30335475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 6940239 - 6940308
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||| |||||||| |||||||||| ||||||| |||||||  | |||||||||||||||||    
T  6940239 cggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 18841087 - 18841014
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||| |||| | ||||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 525
Target Start/End: Complemental strand, 20539749 - 20539644
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg-gacacgtctaatccgagg 519  Q
    |||||||| ||||  ||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| |||| |  || |||||| || ||||||||    
T  20539749 cggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtggcgagacacgcctgatccgagg 20539650  T
Q  520 agtgtc 525  Q
    ||||||    
T  20539649 agtgtc 20539644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 23718010 - 23718079
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  23718010 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Original strand, 24105682 - 24105751
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  24105682 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 490
Target Start/End: Complemental strand, 30404925 - 30404856
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||| |||| |||||||   ||||||||||||||| ||||||||| || |||||||||||||||||    
T  30404925 cggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 20473320 - 20473380
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||| ||||| ||| ||||| || ||||||||||||||||| ||||    
T  20473320 ccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtc 20473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 974746 - 974805
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||||||||||||  |||||| || || ||||||||||||||||| ||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtc 974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 37419714 - 37419793
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    |||| |||||||||||||||| |||| ||||||   | |||||||||||||| ||||| ||| || ||||||||||||||    
T  37419714 cggatacggacaccggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 37419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 2438778 - 2438720
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 2438720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 26769471 - 26769569
Alignment:
Q  402 cggatgcggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||||||||||||||||||| |     |||| ||||||||||||||||||||||||  |||||| ||    ||||||||||||||||| ||||    
T  26769471 cggatacggacacggacaccggacacgacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 12668489 - 12668424
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||| |||||||||||||||||| | ||||||| || |||||||| |||||||| ||||    
T  12668489 acacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||||||||||||||||| ||| ||||| || ||||||||||| |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 38117232 - 38117167
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||| | |  |||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 36756417 - 36756345
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| ||||  ||||||||||||||||||||| || | ||||||| || |||||||| |||||||| ||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtc 36756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 5040730 - 5040792
Alignment:
Q  435 ccgacacaactaataatttgaaaaag--tcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||| ||||||||||||||||   ||||||||| |||||||||||||||||||| ||||    
T  5040730 ccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 5040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 14117814 - 14117731
Alignment:
Q  180 aaatttcgttacttttgatgaaatcatttcttttt-ctattatacccttaactttttattatcttgttctatctacttatctct 262  Q
    |||||| ||||||||||||||||| || ||||||| |||| |||| ||||| | ||||||||||| ||  ||||| ||||||||    
T  14117814 aaattttgttacttttgatgaaattatgtctttttcctataatactcttaagtatttattatcttatttcatctatttatctct 14117731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 506
Target Start/End: Complemental strand, 14996330 - 14996213
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagt 486  Q
    ||||||||||||| |||| || |||| | |||| ||||||| |||  |||||||| |||||||||||| |||| ||| |||||  | |||||||||||||    
T  14996330 atgaagcacggatacggacgcagacatg-acac-ggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagt 14996233  T
Q  487 gtcgttgtcctatcggacac 506  Q
    |||| |||| | ||||||||    
T  14996232 gtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 23058518 - 23058443
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| | |||| || |||||| |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23058518 cggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 23058443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 11223922 - 11223864
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||||| ||||||||| | ||||||| || ||||||||||||||||| ||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 488
Target Start/End: Complemental strand, 29176566 - 29176501
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||| |||| | ||||||  |||||||||||||| |||||||||| || |||||||| ||||||    
T  29176566 gacacttacacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgt 29176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 21091707 - 21091775
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||| ||||||||||||  |||||||||| | ||| | ||||| | || ||||||||||||||||    
T  21091707 cggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 33599016 - 33599068
Alignment:
Q  269 tattgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaa 321  Q
    ||||||||||||||  ||||||||||||||||| ||| |||| || |||||||    
T  33599016 tattgacaaaataacggttaatgttgcattaaactttgaaaataataaataaa 33599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 525
Target Start/End: Original strand, 30298930 - 30299036
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatc-ggacacgtctaatccgag 518  Q
    |||||||| |||| |||||||| ||||||||||| ||||| | ||||||| || ||||||||||||||||| |||| |  | ||||||||||||||||||    
T  30298930 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30299029  T
Q  519 gagtgtc 525  Q
    |||||||    
T  30299030 gagtgtc 30299036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 421 - 525
Target Start/End: Original strand, 30327798 - 30327904
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatc-ggacacgtctaatccgag 518  Q
    |||||||| |||| |||||||| ||||||||||| ||||| | ||||||| || ||||||||||||||||| |||| |  | ||||||||||||||||||    
T  30327798 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30327897  T
Q  519 gagtgtc 525  Q
    |||||||    
T  30327898 gagtgtc 30327904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 507
Target Start/End: Complemental strand, 12895182 - 12895105
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 507  Q
    |||| |||| ||| |||||||||||||||| ||||||||| ||| |||||||||||||||| |||| | |||||||||    
T  12895182 acacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacg 12895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 24613761 - 24613702
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 488
Target Start/End: Complemental strand, 11596438 - 11596360
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||||||| |||||| | || || ||| | |||||||||||||||| ||||||||| || |||||||||||||||    
T  11596438 gacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 12797412 - 12797339
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||| || |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  12797412 cggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 12797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 23293061 - 23292987
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  23293061 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 23292987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 413 - 490
Target Start/End: Original strand, 24543957 - 24544035
Alignment:
Q  413 acggacaccggacactaacacaccgacacaactaataatttgaaaaagt-cacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||| |||||| |||| ||||||||||||||||||| ||||| | ||| |||| || |||||||||||||||||    
T  24543957 acggacaccagacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcg 24544035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 437 - 495
Target Start/End: Complemental strand, 54580082 - 54580024
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| |||||||| ||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 19482654 - 19482719
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||| |  |||||||||||||||    
T  19482654 gacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 40481623 - 40481687
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 507
Target Start/End: Complemental strand, 3947827 - 3947755
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 507  Q
    |||||||| |||||||||||||||| || |||||| || ||||||||||||||||  |||| | |||||||||    
T  3947827 ccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 3947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 21945501 - 21945561
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  21945501 ccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 21945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 51978594 - 51978683
Alignment:
Q  145 ttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcattt---ctttttctattatacccttaact 231  Q
    ||||||||||||| ||||||| | ||||||||| ||||||| |||||||||||||  || ||||    ||||||||| ||||||||||||    
T  51978594 ttttaagattattgacacatacttagaaaactaataaattttgttacttttgatggtattatttgtcatttttctataatacccttaact 51978683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 715677 - 715615
Alignment:
Q  427 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  715677 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 753003 - 752941
Alignment:
Q  427 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  753003 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 4157112 - 4157207
Alignment:
Q  402 cggatgcggacacggacaccggacacta---acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||||||||||||| ||||| |   | |||| ||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  4157112 cggatacggacacggacaccagacacgacacagacactgacacaactaataatttgaaaaa-tcacataatttagtgcaattacaagtgtcggtgtc 4157207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 489
Target Start/End: Complemental strand, 14126184 - 14126118
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    ||||||||||| |||||||   ||||||||||| ||||||||||||| || |||||||| |||||||    
T  14126184 gacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 29205451 - 29205497
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 35158060 - 35157986
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||| |||||||||||||| |||| |||||||||  | |||||||| |||||||| ||||    
T  35158060 cggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 2362041 - 2361976
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||| |||||||||||||||| | |||||||  | |||||||| |||||||| ||||    
T  2362041 acacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc 2361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 483
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  438 acacaactaataatttgaaaaagtcacataatacaatgtaattaca 483  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 28964300 - 28964255
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 32273633 - 32273553
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||||||| || |||||  |||||| ||||||||||| | |||| || |||||||||||||||||||||| | |||||||    
T  32273633 atgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacacaactaataatttgaaaaaataacataat 32273553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 4383352 - 4383419
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||| ||||  ||| |||||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  4383352 cggacactgacacgtcgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaaatgtc 4383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 11110768 - 11110708
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataata 470  Q
    ||||||||||||||||||  |||| |||||||||  |||||||||||||  ||||||||||    
T  11110768 gacacggacaccggacacagacacgccgacacaaggaataatttgaaaatatcacataata 11110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 16073373 - 16073452
Alignment:
Q  415 ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| || |||| || |||||| ||||||||||||||| || |||||| || ||||||||||||||||| ||||    
T  16073373 ggacactggactctgacacgccaacacaagtaataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtc 16073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 20633469 - 20633536
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    |||||||| ||||  ||||||  ||||||||||||||||   ||||||| |||||||||||||||||||||    
T  20633469 cggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaattacaagtgtcgt 20633536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 28084514 - 28084574
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtc 489  Q
    |||| |||||||| |||| |||||||||||  ||||||||| |||||||||||||||||||    
T  28084514 acacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 31800544 - 31800484
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||||||| |||||||||| ||||| | | |||||  |||||||||||||||||||    
T  31800544 acacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcg 31800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 34306864 - 34306805
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  34306864 ccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtc 34306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 38847078 - 38847019
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||| |||||||| |||||||||||||||| ||| || || || ||||||||||||||||    
T  38847078 acactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 49431009 - 49431084
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| | |||| |||||||| ||||||||||| ||||| ||||||||| || |||||||| |||||||| ||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtc 49431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 488
Target Start/End: Complemental strand, 27706251 - 27706185
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||||| ||||  |||||||| ||||||||| ||||| |||||||||  | |||||||||||||||    
T  27706251 ggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  445 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 12895340 - 12895275
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||| ||||||||||||||| |||||||||    |||||||| |||||||| ||||    
T  12895340 acacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc 12895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 37203239 - 37203315
Alignment:
Q  409 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||||||||||||||||| |   ||| |||||  |||||||||||||||| | |||||||  | |||||||||||||||    
T  37203239 ggacacggacaccggacacga---cacagacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 3929573 - 3929630
Alignment:
Q  144 gttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaat 203  Q
    |||||||| ||||||||||||  ||||||||| | ||||||| |||| ||||||||||||    
T  3929573 gttttaagtttatttacacat--taagaaaaccaataaattttgttatttttgatgaaat 3929630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 36635308 - 36635368
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 481  Q
    |||||||| |||| || |||| ||||||||||||| ||| ||||||||| || ||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 51701253 - 51701309
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||| |||||| |||||||||||||||| | |||||||  | |||||||||||||||    
T  51701253 acacggacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 502
Target Start/End: Original strand, 34910289 - 34910382
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 502  Q
    |||| ||||||||| ||||| | ||| ||||||||||||||||||||||||| ||||||||| || |||||||||||| |||| |||| ||||||    
T  34910289 cggatacggacaccagacacga-cacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcgg 34910382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 424 - 495
Target Start/End: Original strand, 10954939 - 10955010
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| || |||||| |||||||||| ||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtc 10955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 10335361 - 10335287
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  10335361 cggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 10335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 55401059 - 55401133
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| | || ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  55401059 cggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 55401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 424 - 488
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  424 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 14209106 - 14209165
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||| ||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 20503451 - 20503518
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||| |||| |||||||||| |||||||||||||| | ||||||| || |||||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 8587096 - 8587022
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| ||| |||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8587096 cggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtc 8587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 495
Target Start/End: Original strand, 25775481 - 25775567
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaa-agtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||| ||||||| |||| || |||||  |||||||||||||| | ||||||||| || ||||||||||||||||| ||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtc 25775567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 28917985 - 28918059
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28917985 cggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 489
Target Start/End: Original strand, 14216845 - 14216944
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    ||||||||||||||||||  | |||||| |||| ||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||    
T  14216845 atgaagcacggatgcggacacagacacg-acac-ggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtg 14216942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 489
Target Start/End: Original strand, 14222974 - 14223073
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    ||||||||||||||||||  | |||||| |||| ||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||    
T  14222974 atgaagcacggatgcggacacagacacg-acac-ggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtg 14223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 495
Target Start/End: Original strand, 21479079 - 21479176
Alignment:
Q  403 ggatgcggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||||||||||||||| |     |||| |||||||| |||||||||||||||| ||||| ||| || ||||||||| ||||||| ||||    
T  21479079 ggatacggacacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 525
Target Start/End: Complemental strand, 25948939 - 25948858
Alignment:
Q  444 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtc 525  Q
    |||||||||||||||| ||||||||| || |||||||| |||||| | |||| | |||||||||| |||||| |||| ||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacgtgtaatccaaggaatgtc 25948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 437 - 490
Target Start/End: Original strand, 26508110 - 26508163
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    |||||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 28812508 - 28812573
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||||||||||||||||| || ||||||||| || |||| |||||||||||| ||||    
T  28812508 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 28812573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 495
Target Start/End: Original strand, 39756188 - 39756294
Alignment:
Q  388 atgaagcacggatgcggatgcggaca-cggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 486  Q
    |||||||||||||  |||| |||||| |||||||  |||||| |||| |||||| || ||||||||| ||||| |||||||||  ||| |||||||||||    
T  39756188 atgaagcacggatatggatacggacatcggacac--gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagt 39756285  T
Q  487 gtcgttgtc 495  Q
    |||| ||||    
T  39756286 gtcggtgtc 39756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 435 - 504
Target Start/End: Complemental strand, 49651847 - 49651778
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggac 504  Q
    |||||||  |||||||||||||||| ||||||||| || ||||||||||||||||| |||| | ||||||    
T  49651847 ccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 10318119 - 10318064
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacat 466  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||    
T  10318119 gacacggacac-ggacactgacacgccgacacagctaataatttgaaaaagtcacat 10318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 485
Target Start/End: Original strand, 14747513 - 14747610
Alignment:
Q  388 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaag 485  Q
    ||||||||||||| ||||| ||||||| ||||||  |||||| |||| |||||||| ||||||||||| ||||| |||||||||  | ||||||||||||    
T  14747513 atgaagcacggatacggatacggacaccggacac--gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 14829676 - 14829747
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  14829676 gacactgacacgccgacacagctaataatttgaaaaa-tcacataattcatggtaattacaagtgtcggtgtc 14829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 16000089 - 16000017
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| ||||||||||||||||||| ||||| | ||||||| || ||||| ||||||||||| ||||    
T  16000089 gacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtc 16000017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 481
Target Start/End: Original strand, 21305218 - 21305290
Alignment:
Q  410 gacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaatta 481  Q
    |||||||||||| ||||||||||| |||||||  ||||||||||| ||||| |||||||||  ||||||||||    
T  21305218 gacacggacaccagacactaacacgccgacacctctaataatttgaaaaaaatcacataattaaatgtaatta 21305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 35994798 - 35994743
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  35994798 ccgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcgt 35994743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 495
Target Start/End: Original strand, 1509534 - 1509597
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  1509534 acactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 422 - 489
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    ||||||| |||| ||||||||  ||||||||||||||| |||||||||  | ||||||||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 14832092 - 14832151
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||| |||| ||| |||||||||||||||| ||||||||  |||||||||||||||||||    
T  14832092 acacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtc 14832151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 495
Target Start/End: Complemental strand, 51206417 - 51206354
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||| |||||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  51206417 acactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtc 51206354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 525
Target Start/End: Complemental strand, 21257045 - 21256960
Alignment:
Q  437 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtc 525  Q
    |||||| |||||||||||||||| ||||||||| || | ||||||||||||||| | || |   ||||||  |||||||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgt---ggacacacctaatccgaggagtgtc 21256960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 525
Target Start/End: Original strand, 7928445 - 7928533
Alignment:
Q  432 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagtgtc 525  Q
    ||||||||||  |||||||||||||||| ||||||||| || |||||||| | |||||| ||     ||||||||| |||||| ||||||||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtg-----tcggacacgcctaatctgaggagtgtc 7928533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 469
Target Start/End: Complemental strand, 8413029 - 8412972
Alignment:
Q  412 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| |||  ||||||||    
T  8413029 cacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataat 8412972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 32400798 - 32400715
Alignment:
Q  403 ggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||| |||||||| |||||||||||| ||||  ||||||| |||||||||||||||  | |||||||    ||||||||||||||||    
T  32400798 ggatacggacacgaacaccggacactgacacggcgacacagctaataatttgaaaagattacataat---ttgtaattacaagtgtc 32400715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 41961723 - 41961651
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| |||| ||| ||||||||||||||||||||  |||||| || |  ||||||||||||||||| ||||    
T  41961723 gacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtc 41961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 495
Target Start/End: Complemental strand, 750678 - 750619
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||||||||||||||||||  ||||||||| |  || |||||||||||||| ||||    
T  750678 cgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtc 750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 15796369 - 15796295
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||| | |||| ||||||||  ||||||||||||||| ||| ||||| || ||||||||||| ||||| ||||    
T  15796369 cggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 24205116 - 24205046
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  24205116 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 24205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 26492280 - 26492206
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||| | |||||||||||||||| ||| | ||| || ||||||||||||| ||| ||||    
T  26492280 cggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtc 26492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 40052318 - 40052364
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 469  Q
    |||||| |||| |||||||| |||||||||||||||| |||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 40052364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 480
Target Start/End: Original strand, 14979179 - 14979224
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 480  Q
    |||||||| |||||||||||||||| ||||||||| || |||||||    
T  14979179 ccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 34185189 - 34185124
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| |||||||  |||||||||| ||||| ||||| ||| || ||||||||||||||||| ||||    
T  34185189 acacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtc 34185124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 488
Target Start/End: Complemental strand, 3164085 - 3164033
Alignment:
Q  436 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    ||||||| |||||||||||||||| ||||||||| || |||||  ||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 490
Target Start/End: Complemental strand, 17005693 - 17005625
Alignment:
Q  422 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||| || |||| |||| ||||||||||||| ||| ||| ||||| || |||||||| ||||||||    
T  17005693 ggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 27505244 - 27505304
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| ||||||||||  |||| |||||||||  | ||||||||||||||||| ||||    
T  27505244 ccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtc 27505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 29508437 - 29508497
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||| || ||||||||||||||||| ||| ||||| || |||||||| | ||||||    
T  29508437 acacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 421 - 488
Target Start/End: Original strand, 51795 - 51862
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  51795 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 14523 - 14580
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 178894 - 178825
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtc 489  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  178894 cggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 20156 - 20224
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  20156 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 13384 - 13458
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  13384 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 13458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 21943 - 21869
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  21943 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 21869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 525
Target Start/End: Original strand, 46628 - 46764
Alignment:
Q  388 atgaagcacggatgcggatgcggaca-cggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 482  Q
    ||||||||||||| ||||  |||||| |||||||    |||||| | |||| ||||||||  ||||||||||||||| ||||||||| || |||||||||    
T  46628 atgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattac 46727  T
Q  483 aagtgtcgttgtcctatcggacacgtctaatccgaggagtgtc 525  Q
    || ||||| ||||      |||||| |||||||||||||||||    
T  46728 aaatgtcggtgtc------gacacgcctaatccgaggagtgtc 46764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 225343 - 225273
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 491  Q
    |||||||| |||| ||||||||  ||||||||||| ||| | ||||||||||||||||||| |||||||||    
T  225343 cggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgt 225273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 423 - 488
Target Start/End: Original strand, 19562 - 19626
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  19562 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 8003 - 8067
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||    
T  8003 acacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtc 8067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 495
Target Start/End: Original strand, 23740 - 23828
Alignment:
Q  408 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||| ||| |||||||||||| |||||| | ||||  |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23740 cggatacgaacaccggacactgacacactgtcacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 23828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 4953 - 4891
Alignment:
Q  427 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  4953 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 537 - 463
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| | || |||||||  |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  537 cggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 8782 - 8856
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| || ||  | ||||||||||||||||| ||||    
T  8782 cggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc 8856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 458
Target Start/End: Complemental strand, 10546 - 10509
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaa 458  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10546 cggacactaacacaccgacacagctaataatttgaaaa 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 92791 - 92859
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    |||||||| |||| |||||||  |||||||||||| ||| | ||||||| || ||||||||||||||||    
T  92791 cggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 507
Target Start/End: Original strand, 23373 - 23490
Alignment:
Q  388 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 487  Q
    ||||||||||||| ||||  ||||||| |||| | |||||| |||| ||||||||  |||||| |  ||||| ||||||||| || |||||||| |||||    
T  23373 atgaagcacggatacggacacggacac-gaca-cagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtg 23470  T
Q  488 tcgttgtcctatcggacacg 507  Q
    ||| |||| | |||||||||    
T  23471 tcggtgtcgtgtcggacacg 23490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 490
Target Start/End: Original strand, 130480 - 130535
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 490  Q
    ||||||||  ||||| ||||||||| ||||||||| || |||||||||||||||||    
T  130480 ccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 7377 - 7319
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 488  Q
    |||| |||||||||||||||||||| |||| |||||||||  | |||||||| ||||||    
T  7377 acacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 484
Target Start/End: Complemental strand, 33429 - 33375
Alignment:
Q  430 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 484  Q
    |||| |||||||| |||||||||||||||| | ||||||| || |||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 241578 - 241652
Alignment:
Q  421 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    |||||||| |||| |||||||| ||||||||||| |||| |||||||||  | ||||||||  ||||||| ||||    
T  241578 cggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtc 241652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 4567 - 4620
Alignment:
Q  270 attgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 323  Q
    |||| ||| ||||||||||||||| ||| ||| |||||||||||||| ||||||    
T  4567 attgtcaagataatagttaatgttacataaaactttaaaaacaacaattaaata 4620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 8696 - 8636
Alignment:
Q  435 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||||||||||||||||||||||  ||||||||| |  | ||||||||| ||||| ||||    
T  8696 ccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtc 8636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 3900 - 3856
Alignment:
Q  445 taataatttgaaaaagtcacataatacaatgtaattacaagtgtc 489  Q
    ||||||||| ||||| ||||||||| || ||||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtc 3856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 372 - 332
Alignment:
Q  269 tattgacaaaataatagttaatgttgcattaaaatttaaaa 309  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  372 tattgacaagacaataattaatgttgcattaaaatttaaaa 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 495
Target Start/End: Complemental strand, 135385 - 135313
Alignment:
Q  423 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 495  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||||| |  |||||||| | |||||| ||||    
T  135385 gacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University