View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12041_high_5 (Length: 311)
Name: NF12041_high_5
Description: NF12041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12041_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 9862776 - 9863064
Alignment:
| Q |
7 |
aggagcagagagagtgttctgaaaagtgtttggtttagaactgaccatcttttggctccatatgcttgacaacaaagtggatccattcccattgttaggc |
106 |
Q |
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| T |
9862776 |
aggaggagagagagtgttctgaaaagtgtttggtttagaactgaccatctttttgctccatatgcttgacaacaaagtggatccattcccattgttaggc |
9862875 |
T |
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| Q |
107 |
ctttgagaatggaatttccggtgatgttggcgaaaccaagtgctaggcaaccgccagctagctctgcttttccttgtcgaccaaggaaaagcattgagat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9862876 |
ctttgagaatggaatttccggtgatgttggcgaaaccaagcgctaggcaaccgccagctagctctgcttttccttgtcgaccaaggaaaagcattgagat |
9862975 |
T |
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| Q |
207 |
aattgaccgagaatacatcattaggcttgtcattgttatgggacacgcaatctttgagagcgatcgcagctcttctttcacctgcatgc |
295 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9862976 |
aattgaccgagaatacatcattaggcctgtcattgttatgggacacgcaatctttgagagcgatcgcagctcttctttcacctgcatgc |
9863064 |
T |
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