View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12041_low_10 (Length: 258)
Name: NF12041_low_10
Description: NF12041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12041_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 10599610 - 10599853
Alignment:
| Q |
14 |
atcaaccaaactacacctaacacacaaatccaaaaccaaacccgacctaataacccacgaatgcaactccttcccaagcgacaaaaactgaatctcagca |
113 |
Q |
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| T |
10599610 |
atcaaccaaactacacccaacacacaaatccaaaaccaaacccgacctaataacccacgaatgcaactccttcccaagcgacaaaaactgaatctcagca |
10599709 |
T |
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| Q |
114 |
cacacagatatcaacccagttaacgtaaacctatccggaacatacccactactcaccaacatctccaaaaacaaatcaatcgcatcatcattataaccat |
213 |
Q |
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| T |
10599710 |
caaaccgatatcaacccagtcaacgtaaatctatccggcacatacccactactcaccaacatttccaaaaacaaatcaatcgcttcatcattataaccat |
10599809 |
T |
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| Q |
214 |
attgagctaacctagtaatcatcaaagtccacgtaacagcattc |
257 |
Q |
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| T |
10599810 |
attgagctaacctagtaatcatcaaagtccacgtaacaacattc |
10599853 |
T |
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