View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12041_low_5 (Length: 485)

Name: NF12041_low_5
Description: NF12041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12041_low_5
NF12041_low_5
[»] chr3 (34 HSPs)
chr3 (283-446)||(12012205-12012367)
chr3 (330-446)||(13661708-13661824)
chr3 (330-446)||(32981535-32981651)
chr3 (330-445)||(13662068-13662183)
chr3 (330-445)||(13662380-13662495)
chr3 (330-439)||(495994-496103)
chr3 (363-446)||(12012636-12012719)
chr3 (330-440)||(496121-496230)
chr3 (330-415)||(13661621-13661706)
chr3 (330-445)||(32981219-32981333)
chr3 (333-445)||(4333914-4334025)
chr3 (333-445)||(21631163-21631274)
chr3 (330-446)||(31721452-31721568)
chr3 (333-445)||(42371302-42371413)
chr3 (330-445)||(13661939-13662054)
chr3 (361-446)||(32981666-32981750)
chr3 (333-445)||(42401854-42401965)
chr3 (330-404)||(31721260-31721335)
chr3 (334-403)||(4148608-4148677)
chr3 (290-355)||(12012483-12012547)
chr3 (155-208)||(42402415-42402468)
chr3 (334-406)||(4149288-4149360)
chr3 (334-406)||(4165059-4165131)
chr3 (360-412)||(4333678-4333730)
chr3 (360-412)||(21630921-21630973)
chr3 (360-412)||(42371603-42371655)
chr3 (283-325)||(21631040-21631082)
chr3 (303-412)||(42402155-42402268)
chr3 (155-208)||(4333317-4333370)
chr3 (155-208)||(21630606-21630659)
chr3 (171-208)||(42371867-42371904)
chr3 (128-208)||(42372218-42372299)
chr3 (288-365)||(42402560-42402636)
chr3 (360-388)||(32980574-32980602)
[»] chr4 (33 HSPs)
chr4 (328-446)||(2491651-2491769)
chr4 (283-445)||(14203871-14204041)
chr4 (330-442)||(11130719-11130831)
chr4 (330-442)||(44468986-44469098)
chr4 (330-442)||(50908575-50908687)
chr4 (330-442)||(50908762-50908874)
chr4 (332-446)||(9604081-9604195)
chr4 (330-442)||(11983691-11983803)
chr4 (285-412)||(14204513-14204638)
chr4 (361-446)||(27529986-27530071)
chr4 (291-394)||(14204705-14204807)
chr4 (360-446)||(11983997-11984083)
chr4 (333-445)||(37082433-37082544)
chr4 (331-446)||(11983840-11983954)
chr4 (115-208)||(14204277-14204371)
chr4 (333-402)||(27530217-27530286)
chr4 (115-208)||(37081503-37081598)
chr4 (333-428)||(54960663-54960757)
chr4 (360-406)||(10819624-10819670)
chr4 (330-404)||(25447166-25447239)
chr4 (361-406)||(567302-567347)
chr4 (361-406)||(567449-567494)
chr4 (330-411)||(8182273-8182354)
chr4 (155-208)||(14203383-14203436)
chr4 (330-411)||(18077303-18077384)
chr4 (155-208)||(36035225-36035278)
chr4 (155-208)||(37081897-37081950)
chr4 (360-412)||(37082256-37082308)
chr4 (361-395)||(45341798-45341832)
chr4 (397-446)||(567113-567162)
chr4 (128-208)||(14202711-14202792)
chr4 (360-412)||(14203687-14203739)
chr4 (297-365)||(37081739-37081806)
[»] chr7 (33 HSPs)
chr7 (330-446)||(29530571-29530687)
chr7 (328-444)||(44602641-44602757)
chr7 (330-428)||(29237316-29237412)
chr7 (287-394)||(46735723-46735829)
chr7 (333-445)||(46736493-46736605)
chr7 (362-444)||(44602886-44602969)
chr7 (333-406)||(42586331-42586404)
chr7 (333-445)||(7668098-7668210)
chr7 (283-412)||(19628823-19628960)
chr7 (333-412)||(46735892-46735971)
chr7 (368-442)||(12308016-12308090)
chr7 (333-445)||(46369816-46369927)
chr7 (360-440)||(42587873-42587952)
chr7 (287-394)||(19629022-19629128)
chr7 (303-412)||(46370117-46370228)
chr7 (330-442)||(15432832-15432941)
chr7 (109-208)||(19628579-19628679)
chr7 (330-406)||(29530458-29530534)
chr7 (366-440)||(42587648-42587722)
chr7 (333-406)||(42588123-42588196)
chr7 (362-406)||(44603098-44603143)
chr7 (173-209)||(29052749-29052785)
chr7 (109-192)||(46736180-46736264)
chr7 (305-412)||(46736796-46736903)
chr7 (109-208)||(46736989-46737089)
chr7 (392-442)||(15444968-15445018)
chr7 (408-446)||(44602471-44602509)
chr7 (283-325)||(46736052-46736094)
chr7 (155-208)||(7669637-7669690)
chr7 (128-208)||(7670132-7670213)
chr7 (155-208)||(46370410-46370463)
chr7 (288-365)||(46370554-46370630)
chr7 (97-208)||(46737484-46737597)
[»] chr8 (7 HSPs)
chr8 (330-470)||(32094992-32095132)
chr8 (283-412)||(37745098-37745226)
chr8 (334-446)||(32094792-32094904)
chr8 (288-394)||(37745290-37745395)
chr8 (360-442)||(21598712-21598794)
chr8 (171-218)||(37744921-37744968)
chr8 (283-325)||(37745033-37745075)
[»] chr5 (38 HSPs)
chr5 (331-470)||(22497205-22497344)
chr5 (330-446)||(42859077-42859193)
chr5 (330-470)||(13861188-13861328)
chr5 (330-446)||(31289770-31289886)
chr5 (333-446)||(40744524-40744637)
chr5 (330-446)||(22499245-22499361)
chr5 (351-442)||(36914062-36914153)
chr5 (360-445)||(40744798-40744883)
chr5 (330-414)||(22554033-22554117)
chr5 (333-445)||(34992093-34992204)
chr5 (115-208)||(42859288-42859382)
chr5 (333-445)||(20405238-20405348)
chr5 (330-442)||(26655067-26655179)
chr5 (330-442)||(26655272-26655384)
chr5 (330-442)||(26926652-26926764)
chr5 (330-442)||(26926857-26926969)
chr5 (333-442)||(11502508-11502617)
chr5 (333-442)||(11509904-11510013)
chr5 (333-442)||(11517277-11517386)
chr5 (333-442)||(11524679-11524788)
chr5 (333-442)||(11532090-11532199)
chr5 (333-442)||(11562968-11563077)
chr5 (384-445)||(22497529-22497590)
chr5 (330-393)||(22493644-22493707)
chr5 (330-385)||(22497356-22497411)
chr5 (330-389)||(22498858-22498917)
chr5 (285-355)||(42858893-42858962)
chr5 (351-427)||(11495393-11495469)
chr5 (360-412)||(20405538-20405590)
chr5 (348-408)||(42858684-42858744)
chr5 (333-442)||(11539562-11539671)
chr5 (155-208)||(20405851-20405904)
chr5 (330-387)||(22498621-22498678)
chr5 (328-385)||(22498681-22498738)
chr5 (393-446)||(42858751-42858804)
chr5 (333-372)||(17761784-17761823)
chr5 (115-208)||(20406238-20406333)
chr5 (115-208)||(34987419-34987514)
[»] chr2 (16 HSPs)
chr2 (283-445)||(347623-347787)
chr2 (95-208)||(23212335-23212449)
chr2 (330-446)||(23212681-23212797)
chr2 (360-440)||(38858151-38858231)
chr2 (287-394)||(348439-348545)
chr2 (333-412)||(348297-348376)
chr2 (283-412)||(5602214-5602352)
chr2 (109-208)||(347999-348099)
chr2 (97-205)||(5601084-5601193)
chr2 (128-208)||(346758-346839)
chr2 (155-208)||(347152-347205)
chr2 (155-208)||(13103173-13103226)
chr2 (360-412)||(347439-347491)
chr2 (128-192)||(5601595-5601659)
chr2 (133-191)||(19178874-19178932)
chr2 (171-208)||(5602036-5602073)
[»] chr1 (41 HSPs)
chr1 (347-446)||(29700014-29700113)
chr1 (330-440)||(34903163-34903273)
chr1 (352-442)||(43762952-43763042)
chr1 (330-442)||(18208558-18208671)
chr1 (333-445)||(7731214-7731325)
chr1 (333-445)||(37392464-37392575)
chr1 (330-429)||(29700495-29700591)
chr1 (333-445)||(41770963-41771074)
chr1 (330-438)||(43473100-43473208)
chr1 (364-442)||(46997657-46997735)
chr1 (333-446)||(17190416-17190528)
chr1 (330-428)||(43763181-43763273)
chr1 (352-442)||(48217766-48217856)
chr1 (330-406)||(39313411-39313487)
chr1 (323-446)||(39313524-39313644)
chr1 (360-429)||(11332735-11332804)
chr1 (360-429)||(11490756-11490825)
chr1 (382-442)||(11332027-11332087)
chr1 (382-442)||(11490048-11490108)
chr1 (330-446)||(29700211-29700326)
chr1 (303-412)||(7731515-7731624)
chr1 (330-424)||(30879612-30879706)
chr1 (303-412)||(37392165-37392274)
chr1 (358-445)||(29700791-29700878)
chr1 (390-440)||(13708013-13708063)
chr1 (333-411)||(32035190-32035268)
chr1 (155-208)||(4294590-4294643)
chr1 (330-426)||(30879510-30879610)
chr1 (155-208)||(37391930-37391983)
chr1 (155-208)||(41770433-41770486)
chr1 (155-208)||(46390448-46390501)
chr1 (360-412)||(41770721-41770773)
chr1 (283-325)||(7731406-7731448)
chr1 (283-325)||(41770840-41770882)
chr1 (288-365)||(7731947-7732023)
chr1 (333-382)||(24551736-24551785)
chr1 (132-208)||(41770103-41770180)
chr1 (288-365)||(41770264-41770340)
chr1 (288-365)||(46390595-46390671)
chr1 (132-208)||(46391953-46392030)
chr1 (133-208)||(37391582-37391658)
[»] chr6 (9 HSPs)
chr6 (330-440)||(14911384-14911497)
chr6 (334-446)||(12275046-12275158)
chr6 (339-445)||(26591335-26591441)
chr6 (333-402)||(15152302-15152372)
chr6 (330-406)||(14911197-14911272)
chr6 (330-405)||(26591552-26591627)
chr6 (333-406)||(12260025-12260098)
chr6 (283-344)||(13044208-13044268)
chr6 (283-344)||(13060230-13060290)
[»] scaffold2013 (1 HSPs)
scaffold2013 (333-445)||(499-610)
[»] scaffold1694 (1 HSPs)
scaffold1694 (333-442)||(706-811)
[»] scaffold1195 (1 HSPs)
scaffold1195 (333-442)||(2216-2321)


Alignment Details
Target: chr3 (Bit Score: 108; Significance: 5e-54; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 283 - 446
Target Start/End: Original strand, 12012205 - 12012367
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttat 382  Q
    ||||||||||||||| || |||||||||| || |||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||| |||| ||    
T  12012205 acacgggcgaagtcgccattgatacaaatctactaacatctac-ttctactaacaatatataaaaattgaagtctagcaaaatttcataatcctcctaat 12012303  T
Q  383 taaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  12012304 taaaactcattatctccttaatttcatgtgcataatggtcattttgcaaaattttatttatttg 12012367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 13661708 - 13661824
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||  |||||||||  ||||   ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||| |    
T  13661708 tactaacaaagtataaaaattaaagtccggcaaaatttcataatcgtccttattaaaactcatgatttccttaattttacgtgcataatggtcattttac 13661807  T
Q  430 caaatttaatttatttg 446  Q
     ||||||||||||||||    
T  13661808 aaaatttaatttatttg 13661824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 32981651 - 32981535
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||| | | |  | |||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||||||| ||||||    
T  32981651 tactaacaatatataaaaattgcaatccatcaaaatttcataatcgtctttattaaaactcaagagctccttaattttatgtgcataatggtcgttttgc 32981552  T
Q  430 caaatttaatttatttg 446  Q
     ||||||||||||||||    
T  32981551 aaaatttaatttatttg 32981535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 13662068 - 13662183
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||| ||||||||||||| |||||  | ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||      
T  13662068 tactaaaaatatataaaaattgaagtccaacaaaaattcataatcttccttattaaaactcatgatctccttaattttatgtgcataattgtcattttct 13662167  T
Q  430 caaatttaatttattt 445  Q
     |||||||||||||||    
T  13662168 aaaatttaatttattt 13662183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 13662380 - 13662495
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||  |||||||| |||||  || |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||      
T  13662380 tactaacaatgcataaaaattgaagtccagtaaaaattcataatcgtccttattaaaactcatgatctccttaattttatgtgcataattgtcattttca 13662479  T
Q  430 caaatttaatttattt 445  Q
     |||||||||||||||    
T  13662480 aaaatttaatttattt 13662495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 439
Target Start/End: Complemental strand, 496103 - 495994
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||| | ||| | |||||| | ||||||||||||||||||||  | |||||||||||||||||||| || ||||||||||||||||||||||    
T  496103 tactaacaatatctgaaagttgaagtacaacaaaatttcataatcgtcctcttcaaaactcatgatctccttaactttatgtgcataatggtcattttgc 496004  T
Q  430 caaatttaat 439  Q
     |||||||||    
T  496003 aaaatttaat 495994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 12012719 - 12012636
Alignment:
Q  363 aatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||||    
T  12012719 aattttataatcgtctttattaaaactcatgatctccttgatttcttgtgcataatggtcattttgcaatatttaatttatttg 12012636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 330 - 440
Target Start/End: Complemental strand, 496230 - 496121
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||| ||| | || ||| || |||||||||||||| ||||  ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  496230 tactaacaatatatgaaagttga-gtacagtaaaatttcataatcatcctctttaaaactcattatctccttaattttatgtgcataatggtcattttgc 496132  T
Q  430 caaatttaatt 440  Q
     ||||||||||    
T  496131 aaaatttaatt 496121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 13661621 - 13661706
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcat 415  Q
    |||||||||| |||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||    
T  13661621 tactaacaatgtataaaaatcgaagtccagcaaaatttcatattcgttcttattaaaactcatgatctctttaattttatgtgcat 13661706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 32981333 - 32981219
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||||||||||||||||||     |||||||||| || |||||||||||| |||||||| |||| ||||| |||||||||||||||||| ||     
T  32981333 tactaacaatatataaaaatcgaagtcctttaaaatttcatgattgtccttattaaa-ctcatgatatcctaaattttatgtgcataatggtcattatgt 32981235  T
Q  430 caaatttaatttattt 445  Q
     |||||||||||||||    
T  32981234 aaaatttaatttattt 32981219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 4333914 - 4334025
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  4333914 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 4334012  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  4334013 gtttaatttattt 4334025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 21631163 - 21631274
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  21631163 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 21631261  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  21631262 gtttaatttattt 21631274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 31721568 - 31721452
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||| ||| || | |||||||| |||||||| || ||||||||| |||||||||||| ||| | |||||||||  ||||||||     
T  31721568 tactaacaatatataaaaattgaaatacaacaaaattttataatcgtgctgattaaaactaatgatctccttacttttacgtgcataattatcattttga 31721469  T
Q  430 caaatttaatttatttg 446  Q
     ||||||| ||||||||    
T  31721468 aaaatttagtttatttg 31721452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 42371413 - 42371302
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||| | |||| |||||||| ||||||||||| | |||||| | ||    
T  42371413 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcgttatcttcttaatttaatgtgcataattg-catttttcaaa 42371315  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  42371314 gtttaatttattt 42371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 13661939 - 13662054
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||| |||||| ||||||   |  ||||||||| | |||||||||||||||||||  || |||||||||| ||||||| |||| ||||| |||    
T  13661939 tactaacaatacataaaattcgaagcccaagaaaatttcacattcgtccttattaaaactcaatatatccttaattttatgtgcagaatgatcattatgc 13662038  T
Q  430 caaatttaatttattt 445  Q
     |||||||||||||||    
T  13662039 aaaatttaatttattt 13662054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 446
Target Start/End: Complemental strand, 32981750 - 32981666
Alignment:
Q  361 aaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    |||||||||||| || ||||||||||||||||||| || ||||||| ||||||||||| || ||||||  ||||||||||||||||    
T  32981750 aaaatttcataaacgaccttattaaaactcatgatttc-ttaattttatgtgcataattgttattttgtaaaatttaatttatttg 32981666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 42401965 - 42401854
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||| |||||||||| ||||    ||||||||||||||  ||||||||||||||| | |||| |||||||| ||||||||||| | |||||| | ||    
T  42401965 taacaatgtataaaaatcaaagtccgccaaaatttcataataatccttattaaaactcgttatcttcttaatttaatgtgcataattg-catttttcaaa 42401867  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  42401866 gtttaatttattt 42401854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 31721335 - 31721260
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataa-tcgtccttattaaaactcatgatctccttaat 404  Q
    |||||||||||| |||||||  ||||| | ||||||||||||| | ||||||||||||||| ||||| ||||||||    
T  31721335 tactaacaatatgtaaaaataaaagtacaacaaaatttcataatttgtccttattaaaactaatgatttccttaat 31721260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 403
Target Start/End: Complemental strand, 4148677 - 4148608
Alignment:
Q  334 aacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaa 403  Q
    |||||||||||||| | |||||| |  ||||||||||||| |||||  |||||||||||||||| |||||    
T  4148677 aacaatatataaaagttgaagtacaataaaatttcataattgtcctctttaaaactcatgatcttcttaa 4148608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 12012483 - 12012547
Alignment:
Q  290 cgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagt 355  Q
    ||||||||||||||| |||||| || |||||||||| || |||||| |||||||||||| ||||||    
T  12012483 cgaagtcgtcactgaaacaaatctactaacatctac-ttctactaaaaatatataaaaaacgaagt 12012547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 42402468 - 42402415
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  42402468 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 42402415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 406
Target Start/End: Complemental strand, 4149360 - 4149288
Alignment:
Q  334 aacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    |||||||||||||| | |||||| | || ||||||||||| |||||  |||||||||||| ||||||| ||||    
T  4149360 aacaatatataaaagttgaagtacaacataatttcataattgtcctctttaaaactcatggtctccttgattt 4149288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 406
Target Start/End: Complemental strand, 4165131 - 4165059
Alignment:
Q  334 aacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    |||||||||||||| | |||||| | || ||||||||||| |||||  |||||||||||| ||||||| ||||    
T  4165131 aacaatatataaaagttgaagtacaacataatttcataattgtcctctttaaaactcatggtctccttgattt 4165059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 4333678 - 4333730
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    ||||||||||||| |||||||||||||| |||  |||| ||||||||||||||    
T  4333678 caaaatttcataaccgtccttattaaaattcactatcttcttaatttcatgtg 4333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 21630921 - 21630973
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    ||||||||||||| |||||||||||||| |||  |||| ||||||||||||||    
T  21630921 caaaatttcataaccgtccttattaaaattcactatcttcttaatttcatgtg 21630973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 42371655 - 42371603
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    ||||||||||||| |||||||||||||| |||  |||| ||||||||||||||    
T  42371655 caaaatttcataaccgtccttattaaaattcactatcttcttaatttcatgtg 42371603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 21631040 - 21631082
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctac 325  Q
    |||||||||||||||| |||||||||||| || ||||||||||    
T  21631040 acacgggcgaagtcgttactgatacaaatctactaacatctac 21631082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 42402268 - 42402155
Alignment:
Q  303 gatacaaatatattaacatctacattatactaacaatatataaa-----aatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatct 397  Q
    ||||||||| || |||||||||| || ||||||||||||||| |     |||||||||    |||||||||||||  ||||||||||||| |||  ||||    
T  42402268 gatacaaatttactaacatctac-ttctactaacaatatatatatatataatcgaagtccttcaaaatttcataactgtccttattaaaattcactatct 42402170  T
Q  398 ccttaatttcatgtg 412  Q
     ||||||||||||||    
T  42402169 tcttaatttcatgtg 42402155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 4333317 - 4333370
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||| ||||    
T  4333317 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatatcat 4333370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 21630606 - 21630659
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || ||| |||||| ||||||||||| |||||||||||||||    
T  21630606 caagttgtcgctcatataattttcaaaataattattaaccatgtgacatgtcat 21630659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 42371904 - 42371867
Alignment:
Q  171 taaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  42371904 taaatttcaaaataattattaaccatgtgacatgtcat 42371867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 42372299 - 42372218
Alignment:
Q  128 aattaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||| ||||||||||||| |||| ||| |||||| |  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  42372299 aattcaaaataattataacacaaagagacaagttttagccgatatgaattttaagataattattaaccatgtgacatgtcat 42372218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 42402636 - 42402560
Alignment:
Q  288 ggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaat 365  Q
    |||||| | ||||||||||||||| || |||||||||| || | |||||||||| |||||| ||||||  ||||||||    
T  42402636 ggcgaaattgtcactgatacaaatctactaacatctac-ttcttctaacaatatctaaaaaacgaagtccagcaaaat 42402560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 388
Target Start/End: Complemental strand, 32980602 - 32980574
Alignment:
Q  360 caaaatttcataatcgtccttattaaaac 388  Q
    |||||||||||||||||||||||||||||    
T  32980602 caaaatttcataatcgtccttattaaaac 32980574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 328 - 446
Target Start/End: Original strand, 2491651 - 2491769
Alignment:
Q  328 tatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcatttt 427  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  2491651 tatactaacaatatataaaaatcgaagtacaccaaaatttcataatcgtccttattaaaattaatgatctccttaattttatgtgcataatggtcatttt 2491750  T
Q  428 gccaaatttaatttatttg 446  Q
    || ||||||||||||||||    
T  2491751 gcaaaatttaatttatttg 2491769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 445
Target Start/End: Original strand, 14203871 - 14204041
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctacattatactaac---------aatatataaaaatcgaagtatagcaaaatttcataat 373  Q
    |||||||||||||| |||||||||||||| || |||||||||| ||||||||||         |||||||||||||| ||||  | ||||||||||||||    
T  14203871 acacgggcgaagtcatcactgatacaaatctactaacatctac-ttatactaacaacaataacaatatataaaaatcaaagtccatcaaaatttcataat 14203969  T
Q  374 cgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttattt 445  Q
      ||||||||||||||||| |||| |||||||||||||||||||| |||||||| | || ||||||||||||    
T  14203970 aatccttattaaaactcattatcttcttaatttcatgtgcataattgtcatttttcaaagtttaatttattt 14204041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 11130719 - 11130831
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||| ||||||||| |  ||||| ||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||||| |||||    
T  11130719 tactaacagtatataaaagtttaagtacagcaaaatttcataatcgtcctctttaaaactcatgatctccttgattttatgtgcataatggtcaatttgc 11130818  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  11130819 aaaatttaattta 11130831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 44469098 - 44468986
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||| ||| | |||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  44469098 tactaacaatatatgaaagttgaagtacagcaaaatttcataatcgtcctatttaaaactcatgatcaccttaattttatgtgcataatcgtcattttgc 44468999  T
Q  430 caaatttaattta 442  Q
     ||||||| ||||    
T  44468998 aaaatttatttta 44468986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 50908687 - 50908575
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||| ||||||| ||| | |||||| | ||||||||||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  50908687 tactaataatatatgaaagttgaagtacaacaaaatttcataatcgtcctctttaaaactcacgatctccttaattttatgtgcataatggtcattttgc 50908588  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  50908587 aaaatttaattta 50908575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 50908874 - 50908762
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||| ||| | |||||| | ||||||||||||||| ||||| |||||||||| |||||| ||||||| |||||||||| |||||||||||    
T  50908874 tactaacaatatatgaaagttgaagtacaacaaaatttcataatcatcctttttaaaactcacgatctctttaattttatgtgcataaaggtcattttgc 50908775  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  50908774 aaaatttaattta 50908762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 332 - 446
Target Start/End: Complemental strand, 9604195 - 9604081
Alignment:
Q  332 ctaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgcca 431  Q
    |||||||| ||||||||||||| || | ||||||||||||||||||||||| |||| ||| |||||  ||||||| || |||||| |||||||||||| |    
T  9604195 ctaacaatctataaaaatcgaaatacaacaaaatttcataatcgtccttatgaaaattcacgatctttttaattttatatgcatagtggtcattttgcaa 9604096  T
Q  432 aatttaatttatttg 446  Q
    |||||||||||||||    
T  9604095 aatttaatttatttg 9604081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 11983691 - 11983803
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||||||||||| ||| ||| ||||||| ||||||||||| |||||||||||||||  |||||||||||| ||||||||||  |||||||  |    
T  11983691 tactaacaatatataaaaaccgaggtacagcaaaacttcataatcgttcttattaaaactcatagtctccttaattttatgtgcataacagtcatttcac 11983790  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  11983791 aaaatttaattta 11983803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 412
Target Start/End: Original strand, 14204513 - 14204638
Alignment:
Q  285 acgggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttatta 384  Q
    |||||||||||| ||||| |||||||| || ||| |||||| || ||||||||||| ||||||||| ||||  | |||||||||||||||||| ||||||    
T  14204513 acgggcgaagtcatcactaatacaaatctactaatatctac-ttctactaacaata-ataaaaatcaaagtccaccaaaatttcataatcgtctttatta 14204610  T
Q  385 aaactcatgatctccttaatttcatgtg 412  Q
    |||||||| |||| ||||||||||||||    
T  14204611 aaactcattatcttcttaatttcatgtg 14204638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 361 - 446
Target Start/End: Original strand, 27529986 - 27530071
Alignment:
Q  361 aaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||||| || ||||||||| ||||||    
T  27529986 aaaatttcataattgtccttcttaaaactcatgatctctttaattttatgtgcataatggtcatttcgcaaaatttaatatatttg 27530071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 291 - 394
Target Start/End: Original strand, 14204705 - 14204807
Alignment:
Q  291 gaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactc 390  Q
    ||||||||||||||||||||| || ||||||||| ||| | ||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||||     
T  14204705 gaagtcgtcactgatacaaatctactaacatcta-attctgctaacaatatataaaaatcaaagtctatcaaattttcataatcatccttattaaaacta 14204803  T
Q  391 atga 394  Q
    ||||    
T  14204804 atga 14204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 446
Target Start/End: Original strand, 11983997 - 11984083
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    |||||||||||||||||| || |||||||||||  |||||||||||| ||||||||||  |||||||||| ||||||||||||||||    
T  11983997 caaaatttcataatcgtctttgttaaaactcatagtctccttaattttatgtgcataacagtcattttgcaaaatttaatttatttg 11984083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 37082433 - 37082544
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  37082433 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 37082531  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  37082532 gtttaatttattt 37082544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 446
Target Start/End: Original strand, 11983840 - 11983954
Alignment:
Q  331 actaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgcc 430  Q
    |||||||||||||||||||||||||| | ||||||| |||||||||| | ||||| || |||  |||||||||||| || |||||||  ||||||| ||     
T  11983840 actaacaatatataaaaatcgaagtacatcaaaatt-cataatcgtcttcattaatacgcatagtctccttaattttatatgcataacagtcatttcgca 11983938  T
Q  431 aaatttaatttatttg 446  Q
    ||||||||||||||||    
T  11983939 aaatttaatttatttg 11983954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 14204277 - 14204371
Alignment:
Q  115 tatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||||||| |||||| || ||||||||||||| | ||||| |||||| ||  | || |||||||||||||||||||||| |||||||||||||||    
T  14204277 tatcattaggtacaaatttaaaataattataacaaaagagacaagttttcgttaatataaatttcaagataattattaaccatgtgacatgtcat 14204371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 27530217 - 27530286
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctcctta 402  Q
    ||||||||||||||| | |||||  | ||||||||||||||| |||||||||||||||||||||| ||||    
T  27530217 taacaatatataaaagttgaagtgcatcaaaatttcataatcctccttattaaaactcatgatctactta 27530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 37081503 - 37081598
Alignment:
Q  115 tatcattaagtacaa-ttaaaaataattataataca-agaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||||||||| || ||||||||||||| ||| |||| |||||| | || ||| | ||||| |||||||||||||| |||||||||||||||    
T  37081503 tatcattaagtacaaattcaaaataattataacacagagagacaagttttaaccgatatgaattttaagataattattaaccatgtgacatgtcat 37081598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 428
Target Start/End: Original strand, 54960663 - 54960757
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttg 428  Q
    ||||||||||||||| || || |  | |||| ||||||||| |||||||||||||||||| |||||||||||   |||||||||||||| ||||||    
T  54960663 taacaatatataaaactcaaaattcaacaaattttcataattgtccttattaaaactcat-atctccttaatcgaatgtgcataatggtaattttg 54960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 406
Target Start/End: Original strand, 10819624 - 10819670
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  10819624 caaaatttcataatcgtccctattaaaactcatgatcttcttaattt 10819670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 25447239 - 25447166
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaat 404  Q
    |||||||||| ||||||||| |||| | | ||||||||||||||||||||||||  |||||||||| || |||||    
T  25447239 tactaacaatgtataaaaattgaagcacaacaaaatttcataatcgtccttatt-taactcatgatatctttaat 25447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 567302 - 567347
Alignment:
Q  361 aaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||    
T  567302 aaaatttcataattgtccttattaaaactcataatctcgttaattt 567347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 567449 - 567494
Alignment:
Q  361 aaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  567449 aaaatttcataattgtccttattaaaactcaggatatccttaattt 567494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 8182354 - 8182273
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgt 411  Q
    |||||||||||||| ||| |  ||||| |  |||||||||||||||||||  || ||||||||||||| |||||||| ||||    
T  8182354 tactaacaatatatgaaagttaaagtacaaaaaaatttcataatcgtcctatttcaaactcatgatcttcttaattttatgt 8182273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 14203383 - 14203436
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  14203383 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 14203436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 18077384 - 18077303
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgt 411  Q
    |||||||||||||| ||| |  ||||| |  |||||||||||||||||||  || ||||||||||||| |||||||| ||||    
T  18077384 tactaacaatatatgaaagttaaagtacaaaaaaatttcataatcgtcctatttcaaactcatgatcttcttaattttatgt 18077303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 36035278 - 36035225
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||| |||||| || |||||||||| ||||||||||| |||||||||||||||    
T  36035278 caagtcgtcactcatataaatttcaaaataattattaaccatgtgacatgtcat 36035225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 37081897 - 37081950
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  37081897 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 37081950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 37082256 - 37082308
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    ||||||||||||| |||||||||||||| |||  |||| ||||||||||||||    
T  37082256 caaaatttcataaccgtccttattaaaattcactatcttcttaatttcatgtg 37082308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 45341798 - 45341832
Alignment:
Q  361 aaaatttcataatcgtccttattaaaactcatgat 395  Q
    |||||||||||||||||||||||||||||| ||||    
T  45341798 aaaatttcataatcgtccttattaaaactcttgat 45341832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 446
Target Start/End: Original strand, 567113 - 567162
Alignment:
Q  397 tccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    |||||||||| ||  |||||||||||||||||  ||||||||||||||||    
T  567113 tccttaattttataagcataatggtcattttgtaaaatttaatttatttg 567162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 14202711 - 14202792
Alignment:
Q  128 aattaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||| ||||||||||||| |||| ||| ||||||||  | ||| | ||||| ||||| |||||||| |||||||||||||||    
T  14202711 aattcaaaataattataacacaaagagacaagttgtagccgatatgaattttaagatgattattaaccatgtgacatgtcat 14202792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 14203687 - 14203739
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    ||||||||||||| ||||| |||||||| |||  |||| ||||||||||||||    
T  14203687 caaaatttcataaccgtccatattaaaattcactatcttcttaatttcatgtg 14203739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 37081739 - 37081806
Alignment:
Q  297 gtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaat 365  Q
    |||||||||||||||||| ||| |||||| || | |||||||||| |||||| ||||||  ||||||||    
T  37081739 gtcactgatacaaatatactaatatctac-ttcttctaacaatatctaaaaaacgaagtccagcaaaat 37081806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 29530687 - 29530571
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  29530687 tactaacaatatataaaaatcaaagtaaagcaaaatttcataatcgtccttattaaaactcatgatctccttaattttacgtgcgtaatggtcattttgc 29530588  T
Q  430 caaatttaatttatttg 446  Q
     ||||||||||||||||    
T  29530587 aaaatttaatttatttg 29530571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 328 - 444
Target Start/End: Original strand, 44602641 - 44602757
Alignment:
Q  328 tatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcatttt 427  Q
    |||||||| ||| ||||||| |||||||| |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  44602641 tatactaaaaatttataaaattcgaagtacataaaaatttcatgatcgtcctcattaaaactcatgatctccttaactttatgtgcataatggtcatttt 44602740  T
Q  428 gccaaatttaatttatt 444  Q
    || ||||||||||||||    
T  44602741 gcaaaatttaatttatt 44602757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 330 - 428
Target Start/End: Original strand, 29237316 - 29237412
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttg 428  Q
    |||||||||||||||||  |||||| | | ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  29237316 tactaacaatatataaa--tcgaagcacaccaaaatttcataatcgtcctctttaaaactcatgatctccttaattttatgtgcataatggtcattttg 29237412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 46735829 - 46735723
Alignment:
Q  287 gggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaa 386  Q
    ||||||||||||||||||||||||| || ||||||||| ||| | ||||||||||||||||||| |||| ||||||| |||||||||| |||||||||||    
T  46735829 gggcgaagtcgtcactgatacaaatctactaacatcta-attctgctaacaatatataaaaatcaaagtctagcaaattttcataatcatccttattaaa 46735731  T
Q  387 actcatga 394  Q
    ||| ||||    
T  46735730 actaatga 46735723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 46736605 - 46736493
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | |||||||| |||||  ||||||||||||||||| |||| |||||||||||||||||||| |||||||| | ||    
T  46736605 taacaatatataaaaatcaaagtccaccaaaatttaataataatccttattaaaactcattatcttcttaatttcatgtgcataattgtcatttttcaaa 46736506  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  46736505 gtttaatttattt 46736493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 362 - 444
Target Start/End: Original strand, 44602886 - 44602969
Alignment:
Q  362 aaatttcataatcgtccttattaaaa-ctcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatt 444  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  44602886 aaatttcataattgtccttattaaaaactcatgatctccttaactttatgtgcataatggtcattttgcaaaatttaatttatt 44602969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 42586404 - 42586331
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  42586404 taacaatatataaaaatcgaagtctagcaaaatttaataatcgttcttattaaaactcatgttctccttaattt 42586331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 7668210 - 7668098
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||| |||||||||  ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||||||||||||||| |||||||| | ||    
T  7668210 taacaatctataaaaattaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttcatgtgcataattgtcatttttcaaa 7668111  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  7668110 gtttaatttattt 7668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 19628823 - 19628960
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctacatt--------atactaacaatatataaaaatcgaagtatagcaaaatttcataatc 374  Q
    |||||| ||||||| |||||||||||||| || |||| |||||||         ||| |||||||||||||||||| ||||  | |||||||||||||||    
T  19628823 acacggacgaagtcatcactgatacaaatttactaacttctacatctactaacaataataacaatatataaaaatcaaagtccaccaaaatttcataatc 19628922  T
Q  375 gtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  19628923 gtccttattaaaactcattatcttcttaatttcatgtg 19628960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 412
Target Start/End: Complemental strand, 46735971 - 46735892
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  46735971 taacaatatataaaaatcaaagtccaccaaaatttcataatcgtccttattaaaactcattatcttcttaatttcatgtg 46735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 12308016 - 12308090
Alignment:
Q  368 cataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||  |||||||| ||||||||||||    
T  12308016 cataatcgtccttattaaaactcatgatctccttaattttatatgcataatgagcattttgcaaaatttaattta 12308090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 46369927 - 46369816
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  46369927 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 46369829  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  46369828 gtttaatttattt 46369816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 42587952 - 42587873
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatt 440  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||   ||||||||||    
T  42587952 caaaatttcataatcgtccttattaaaactcatgat-ttcttaattacgtgtgcataatggtcattttaaaaaatttaatt 42587873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 19629022 - 19629128
Alignment:
Q  287 gggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaa 386  Q
    |||||||||||||||||| |||||| || ||||||||| ||| | ||||||||||||||||| | |||| || |||| ||| |||||| |||||||||||    
T  19629022 gggcgaagtcgtcactgacacaaatctactaacatcta-attctgctaacaatatataaaaaacaaagtctatcaaatttttataatcatccttattaaa 19629120  T
Q  387 actcatga 394  Q
    ||| ||||    
T  19629121 actaatga 19629128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 46370228 - 46370117
Alignment:
Q  303 gatacaaatatattaacatctacattatactaacaatatata---aaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctcc 399  Q
    ||||||||| || |||||| ||| || |||||||||||||||   |||||||||||    |||||||||||||||||||||||||||| |||  |||| |    
T  46370228 gatacaaatttactaacatatac-ttctactaacaatatatatataaaatcgaagtccttcaaaatttcataatcgtccttattaaaattcactatcttc 46370130  T
Q  400 ttaatttcatgtg 412  Q
    |||||||||||||    
T  46370129 ttaatttcatgtg 46370117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 15432832 - 15432941
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||| | | | || ||||||||||| |||||||| |  ||||||||   ||| |||||| ||| |||||||||||||| ||||| |    
T  15432832 tactaacaatatataaaagttggattacagcaaaatttcgtaatcgtcatctttaaaact---gatatccttatttttatgtgcataatggtgattttac 15432928  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  15432929 aaaatttaattta 15432941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 19628579 - 19628679
Alignment:
Q  109 acatgatatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtca 207  Q
    ||||| |||||||| |||||| || ||||||| ||||| | ||||| |||||| ||  | || |||||||||||||||||||||| ||| ||||||||||    
T  19628579 acatgttatcattaggtacaaatttaaaataactataacaaaagagacaagttttcgttaatataaatttcaagataattattaaccatttgacatgtca 19628678  T
Q  208 t 208  Q
    |    
T  19628679 t 19628679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 29530534 - 29530458
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||||||||||| ||||||| ||||  |  ||||||||||||| ||| |||||||||| ||||||||| |||||||    
T  29530534 tactaacaatatacaaaaatctaagtccaaaaaaatttcataattgtcattattaaaacccatgatctctttaattt 29530458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 42587722 - 42587648
Alignment:
Q  366 ttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatt 440  Q
    |||||||||||||||||||||| | ||||||| || | ||| |||||||||||  ||||||| | ||||||||||    
T  42587722 ttcataatcgtccttattaaaattaatgatcttctaatttttatgtgcataattatcatttttcaaaatttaatt 42587648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 42588196 - 42588123
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||||| ||||||||| ||| |  |||||||||||||||| || |||||||||| | ||||| ||||||||||    
T  42588196 taacaatctataaaaattgaaatcgagcaaaatttcataattgttcttattaaaatttatgatgtccttaattt 42588123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 44603098 - 44603143
Alignment:
Q  362 aaatttcataatcgtccttattaaaa-ctcatgatctccttaattt 406  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||    
T  44603098 aaatttcataattgtccttattaaaaactcatgatctccttaattt 44603143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 29052785 - 29052749
Alignment:
Q  173 aatttcaagataattattaatcatgtgacatgtcata 209  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29052785 aattttaagataattattaatcatgtgacatgtcata 29052749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 46736264 - 46736180
Alignment:
Q  109 acatgatatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaa 192  Q
    ||||| |||||||| |||||| || ||||||||||||| | ||||| |||||| ||  | || ||||||||||||||||||||||    
T  46736264 acatgttatcattaggtacaaatttaaaataattataacaaaagagacaagttttcgttaatataaatttcaagataattattaa 46736180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 412
Target Start/End: Complemental strand, 46736903 - 46736796
Alignment:
Q  305 tacaaatatattaacatctacattatactaacaatatataaa-aatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaa 403  Q
    ||||||| || |||||||||| || ||||||||||||||| | |||||||||    ||||||||||||| |||||||||||||| |||  || | |||||    
T  46736903 tacaaatttactaacatctac-ttctactaacaatatatatataatcgaagtccttcaaaatttcataaccgtccttattaaaattcactattttcttaa 46736805  T
Q  404 tttcatgtg 412  Q
    ||| |||||    
T  46736804 ttttatgtg 46736796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 208
Target Start/End: Complemental strand, 46737089 - 46736989
Alignment:
Q  109 acatgatatcattaagtaca-attaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtca 207  Q
    ||||| ||| ||| |||||| |||||||| |||||||| | || |  ||||||||  || || |||||||||| ||||||||||| ||||||||||||||    
T  46737089 acatgttattattgagtacacattaaaaaaaattataacataataaacaagttgttgctcatgtaaatttcaaaataattattaaccatgtgacatgtca 46736990  T
Q  208 t 208  Q
    |    
T  46736989 t 46736989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 15444968 - 15445018
Alignment:
Q  392 tgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    ||||||||||||||| |||||||||||| | ||||| | ||||||||||||    
T  15444968 tgatctccttaattttatgtgcataatgatgattttacaaaatttaattta 15445018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 446
Target Start/End: Original strand, 44602471 - 44602509
Alignment:
Q  408 atgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  44602471 atgtgcataattgtcattttgcaaaatttaatttatttg 44602509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 46736094 - 46736052
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctac 325  Q
    |||||||||||||||||||| |||||||| || ||||||||||    
T  46736094 acacgggcgaagtcgtcactaatacaaatctactaacatctac 46736052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 7669690 - 7669637
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || ||||||| || ||||||||||| |||||||||||||||    
T  7669690 caagttgtcgctcatataaattttaaaataattattaaccatgtgacatgtcat 7669637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 7670213 - 7670132
Alignment:
Q  128 aattaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||| ||||||||||||| |||| ||| ||||||||  | ||| | ||||| |||||||||||||| ||| |||||||||||    
T  7670213 aattcaaaataattataacacaaagagacaagttgtagccgatatgaattttaagataattattaaccatatgacatgtcat 7670132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 46370463 - 46370410
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| ||| |||||||||||    
T  46370463 caagttgtcgctcatataaatttcaaaataattattaaccatatgacatgtcat 46370410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 46370630 - 46370554
Alignment:
Q  288 ggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaat 365  Q
    |||||| | ||||||||||||||| || |||||||||| || | |||||||||| |||||| ||||||  ||||||||    
T  46370630 ggcgaaattgtcactgatacaaatctactaacatctac-ttcttctaacaatatctaaaaaacgaagtccagcaaaat 46370554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 46737597 - 46737484
Alignment:
Q  97 attatacacgggacatgatatcattaagtacaa-ttaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatc 194  Q
    ||||||||||| |  || ||||||| ||||||| || ||||||||||||| |||| ||| ||||| ||  | ||| | ||||| |||||||||||||| |    
T  46737597 attatacacggcatttgttatcattgagtacaaattcaaaataattataacacaaagagacaagtggtagccgatatgaattttaagataattattaacc 46737498  T
Q  195 atgtgacatgtcat 208  Q
    | ||||||||||||    
T  46737497 aggtgacatgtcat 46737484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 330 - 470
Target Start/End: Original strand, 32094992 - 32095132
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32094992 tactaacaatatataaaaatcaaagtccagcaaaatttcataatagtctttattaaaactcatgatctccttaattttatgtgcataatggtcattttgc 32095091  T
Q  430 caaatttaatttatttgnnnnnnnaaaaattaattacggat 470  Q
     ||||||||||||||||       |||||||||||||||||    
T  32095092 aaaatttaatttatttgttgtttaaaaaattaattacggat 32095132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 37745098 - 37745226
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttat 382  Q
    |||||||||||||| ||||| |||||||| || |||||||||| || ||||||||||||||||||||| ||||  | |||||||||||| ||||||||||    
T  37745098 acacgggcgaagtcatcactaatacaaatctactaacatctac-ttctactaacaatatataaaaatcaaagtccaccaaaatttcatagtcgtccttat 37745196  T
Q  383 taaaactcatgatctccttaatttcatgtg 412  Q
    |||||||||| |||| ||||||||||||||    
T  37745197 taaaactcattatcttcttaatttcatgtg 37745226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 334 - 446
Target Start/End: Original strand, 32094792 - 32094904
Alignment:
Q  334 aacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaa 433  Q
    |||||||| ||||||||||| | ||||||||||||| ||||||| |||||||||||| |||||||||||||||  |||  |||||||||||||||| |||    
T  32094792 aacaatatgtaaaaatcgaaatctagcaaaatttcaaaatcgtcattattaaaactcttgatctccttaattttttgtatataatggtcattttgcaaaa 32094891  T
Q  434 tttaatttatttg 446  Q
    | |||||||||||    
T  32094892 tataatttatttg 32094904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 37745290 - 37745395
Alignment:
Q  288 ggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaa 387  Q
    |||||||||||||||||||||||| ||  |||||||| ||| | ||||||||||||||||||| |||| ||||||| |||||||||| | ||||||||||    
T  37745290 ggcgaagtcgtcactgatacaaatctaccaacatcta-attctgctaacaatatataaaaatcaaagtctagcaaattttcataatcattcttattaaaa 37745388  T
Q  388 ctcatga 394  Q
    || ||||    
T  37745389 ctaatga 37745395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 442
Target Start/End: Original strand, 21598712 - 21598794
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    ||||||||||||||||||||  ||||||||||| ||||| ||||||| || |||||||| |||||||||  ||||||||||||    
T  21598712 caaaatttcataatcgtcctctttaaaactcataatctctttaattttatttgcataatagtcattttgtaaaatttaattta 21598794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 37744921 - 37744968
Alignment:
Q  171 taaatttcaagataattattaatcatgtgacatgtcataacaaatata 218  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||    
T  37744921 taaatttcaagataattattaaccatgtgacatgtcatcactaatata 37744968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 37745033 - 37745075
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctac 325  Q
    |||||||||||||||||||| |||||||| || ||||||||||    
T  37745033 acacgggcgaagtcgtcactaatacaaatctactaacatctac 37745075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 331 - 470
Target Start/End: Complemental strand, 22497344 - 22497205
Alignment:
Q  331 actaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgcc 430  Q
    ||||||||||||||||||| |||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||     
T  22497344 actaacaatatataaaaattgaagtacaacaaaattttataattgtccttattaaaactcatgatctctttaattttatgtgcataatggtcaatttgca 22497245  T
Q  431 aaatttaatttatttgnnnnnnnaaaaattaattacggat 470  Q
    ||||||||||||||||       |||||||||||||||||    
T  22497244 aaatttaatttatttgttttaaaaaaaattaattacggat 22497205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 42859193 - 42859077
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||||||||| ||||||||||| | |||| ||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  42859193 tactaacaatatataaaaatcgaagtctagcaaaattttacaatcctcctttttaaaactcattatctccttaatttcatgcgcataatcgtcattttgc 42859094  T
Q  430 caaatttaatttatttg 446  Q
     |||||||||| |||||    
T  42859093 aaaatttaattgatttg 42859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 330 - 470
Target Start/End: Complemental strand, 13861328 - 13861188
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||| ||| ||||| |||||||||||||||||| ||||||||||||||||| | |     
T  13861328 tactaacaatatataaaaatcgaagttcagcaaaatttcataattgtctttaataaaattcatgatctccttaattttatgtgcataatggtcatatagt 13861229  T
Q  430 caaatttaatttatttgnnnnnnnaaaaattaattacggat 470  Q
     ||||||||||||||||       |||||||||||||||||    
T  13861228 aaaatttaatttatttgtttttaaaaaaattaattacggat 13861188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 31289770 - 31289886
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||| ||||||||| |||||  ||  |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  31289770 tactaacaatttataaaaattgaagtccagtgaaattttataatcgtccttattaaaactcaagatctccttaattttatgtgcataatggtcattttgc 31289869  T
Q  430 caaatttaatttatttg 446  Q
     |||||| || ||||||    
T  31289870 aaaattttatctatttg 31289886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 446
Target Start/End: Original strand, 40744524 - 40744637
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||||||||||||| || | ||||||||||||||| | |||||| ||||| |||||||||||||||| |||| |||||| |||||||| | ||    
T  40744524 taacaatatataaaaatcgaaatacaccaaaatttcataatctttcttatttaaacttatgatctccttaattttatgttcataatagtcattttacaaa 40744623  T
Q  433 atttaatttatttg 446  Q
     |||||||||||||    
T  40744624 ctttaatttatttg 40744637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 22499361 - 22499245
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||| ||| || | ||||||||||||||| |||||||||||||| |||| | ||||||||| ||||||||||  ||| |||||     
T  22499361 tactaacaatatataaaaattgaactacaacaaaatttcataatcatccttattaaaacttatgaccgccttaattttatgtgcataactgtcgttttga 22499262  T
Q  430 caaatttaatttatttg 446  Q
     || |||||||||||||    
T  22499261 aaattttaatttatttg 22499245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 36914153 - 36914062
Alignment:
Q  351 gaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    |||||| | ||||| |||||||| ||| |  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  36914153 gaagtacaacaaaagttcataattgtcttctttaaaactcatgatctccttaattttatgtgcataatggtcattttgcaaaatttaattta 36914062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 40744798 - 40744883
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttattt 445  Q
    |||||||| |||| | | |||||||||||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||    
T  40744798 caaaattttataagctttcttattaaaactcatgatttccttaattttatgtgcataatggtcattttacaaaatttaatttattt 40744883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 330 - 414
Target Start/End: Original strand, 22554033 - 22554117
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgca 414  Q
    ||||||||||||||||||||||||||  || ||||||||||||| ||||||| |||||| ||| ||||||||||||| |||||||    
T  22554033 tactaacaatatataaaaatcgaagtccagaaaaatttcataatagtccttactaaaacacataatctccttaattttatgtgca 22554117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 34992093 - 34992204
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  34992093 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 34992191  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  34992192 gtttaatttattt 34992204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 42859382 - 42859288
Alignment:
Q  115 tatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||| ||||||| |||||||||||||||||| || ||  |||||||| ||||| ||||||||||||||||||||||  ||||||||||||||    
T  42859382 tatcattgagtacaaattaaaaataattataatataaaagataagttgtcgctgatataaatttcaagataattattaactatgtgacatgtcat 42859288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 20405348 - 20405238
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| | ||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  20405348 taacaatatataaaaatcta-gtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 20405251  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  20405250 gtttaatttattt 20405238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 26655067 - 26655179
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||| ||||||| || | |||||| || | |||||||||| ||||||  ||||||||||| | ||||||||||| || || ||||||||||||||||    
T  26655067 tactaaccatatatagaagttgaagtacagtataatttcataaccgtcctctttaaaactcataacctccttaattttatatgaataatggtcattttgc 26655166  T
Q  430 caaatttaattta 442  Q
      |||||||||||    
T  26655167 ataatttaattta 26655179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 26655272 - 26655384
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||| ||| | |||||  |  | ||| ||||| |||||||  ||||||||||| | |||||||| || ||||||||||||||||||||||    
T  26655272 tactaacaatatatgaaagttgaagtgcaatataatctcatattcgtcctctttaaaactcataacctccttaactttatgtgcataatggtcattttgc 26655371  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  26655372 aaaatttaattta 26655384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 26926652 - 26926764
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||| ||||||| || | |||||| || | |||||||||| ||||||  ||||||||||| | ||||||||||| || || ||||||||||||||||    
T  26926652 tactaaccatatatagaagttgaagtacagtataatttcataaccgtcctctttaaaactcataacctccttaattttatatgaataatggtcattttgc 26926751  T
Q  430 caaatttaattta 442  Q
      |||||||||||    
T  26926752 ataatttaattta 26926764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 442
Target Start/End: Original strand, 26926857 - 26926969
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||| ||| | |||||  |  | ||| ||||| |||||||  ||||||||||| | |||||||| || ||||||||||||||||||||||    
T  26926857 tactaacaatatatgaaagttgaagtgcaatataatctcatattcgtcctctttaaaactcataacctccttaactttatgtgcataatggtcattttgc 26926956  T
Q  430 caaatttaattta 442  Q
     ||||||||||||    
T  26926957 aaaatttaattta 26926969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11502617 - 11502508
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||| | || ||| || ||| ||| ||||| ||||| |||| ||||||| |||| |||||||  ||||||||||| |||||||||| ||    
T  11502617 taacaatatatgaaagttgatgtacagaaaagttttataatggtcctcattataactcataatcttcttaattatatgtgcataatagtcattttgcaaa 11502518  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  11502517 atttaattta 11502508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11510013 - 11509904
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||| | || ||| || ||| ||| ||||| ||||| |||| ||||||| |||| |||||||  ||||||||||| |||||||||| ||    
T  11510013 taacaatatatgaaagttgatgtacagaaaagttttataatggtcctcattataactcataatcttcttaattatatgtgcataatagtcattttgcaaa 11509914  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  11509913 atttaattta 11509904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11517386 - 11517277
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||| | || ||| || ||| ||| ||||| ||||| |||| ||||||| |||| |||||||  ||||||||||| |||||||||| ||    
T  11517386 taacaatatatgaaagttgatgtacagaaaagttttataatggtcctcattataactcataatcttcttaattatatgtgcataatagtcattttgcaaa 11517287  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  11517286 atttaattta 11517277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11524788 - 11524679
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||| | || ||| || ||| ||| ||||| ||||| |||| ||||||| |||| |||||||  ||||||||||| |||||||||| ||    
T  11524788 taacaatatatgaaagttgatgtacagaaaagttttataatggtcctcattataactcataatcttcttaattatatgtgcataatagtcattttgcaaa 11524689  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  11524688 atttaattta 11524679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11532199 - 11532090
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||| | || ||| || ||| ||| ||||| ||||| |||| ||||||| |||| |||||||  ||||||||||| |||||||||| ||    
T  11532199 taacaatatatgaaagttgatgtacagaaaagttttataatggtcctcattataactcataatcttcttaattatatgtgcataatagtcattttgcaaa 11532100  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  11532099 atttaattta 11532090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11563077 - 11562968
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||| | |||||| |  ||| ||| ||||| |||||  ||| ||||||| |||| |||||||| ||||||||||| |||||||||| ||    
T  11563077 taacaatatatgaaagttgaagtacaaaaaagttttataatggtcctctttataactcataatcttcttaattttatgtgcataatagtcattttgcaaa 11562978  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  11562977 atttaattta 11562968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 445
Target Start/End: Complemental strand, 22497590 - 22497529
Alignment:
Q  384 aaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttattt 445  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| || |||| |||||||    
T  22497590 aaaactcatgatctccttaattttatgtgcataatggttattttgcaaattttattttattt 22497529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 22493707 - 22493644
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatg 393  Q
    ||||||||||||||| ||||| ||||| |  ||||||||||||| |||||||||||||||||||    
T  22493707 tactaacaatatatagaaatcaaagtacacaaaaatttcataattgtccttattaaaactcatg 22493644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 22497411 - 22497356
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaa 385  Q
    ||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||    
T  22497411 tactaacaatatataaaaatcaaagtacaacaaaatttcacaatcgtccttattaa 22497356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 22498917 - 22498858
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaact 389  Q
    ||||||||||| ||||||||||||||| | ||||||||||| || |||||||||||||||    
T  22498917 tactaacaataaataaaaatcgaagtacaacaaaatttcatcattgtccttattaaaact 22498858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 355
Target Start/End: Complemental strand, 42858962 - 42858893
Alignment:
Q  285 acgggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagt 355  Q
    ||||||||| ||||||||||||||||| || |||||||||  || |||||||||||||||||||| |||||    
T  42858962 acgggcgaaatcgtcactgatacaaatctactaacatcta-tttctactaacaatatataaaaattgaagt 42858893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 427
Target Start/End: Complemental strand, 11495469 - 11495393
Alignment:
Q  351 gaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcatttt 427  Q
    |||||| | ||||||||||||||||||||  ||| ||||||| ||||||||||||| || |||||| |||| |||||    
T  11495469 gaagtacaacaaaatttcataatcgtcctctttataactcataatctccttaattttatatgcatattggttatttt 11495393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 20405590 - 20405538
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    |||||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  20405590 caaaatttcataatcgtccttattaaaattcactatcttcttaatttcatgtg 20405538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 42858684 - 42858744
Alignment:
Q  348 atcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttca 408  Q
    ||||||||  |||||||||| ||||||||| ||||||||||| | ||||||||||||||||    
T  42858684 atcgaagtccagcaaaattttataatcgtctttattaaaacttacgatctccttaatttca 42858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 11539671 - 11539562
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||| ||  | |||||| || ||| ||| ||||| |||||  ||| |||||||  ||| |||||||| ||||||||||| |||||||||| ||    
T  11539671 taacaatatatgaatgttgaagtacagaaaagttttataatggtcctctttataactcatattcttcttaattttatgtgcataatagtcattttgcaaa 11539572  T
Q  433 atttaattta 442  Q
    |||| |||||    
T  11539571 atttcattta 11539562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 20405904 - 20405851
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  20405904 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 20405851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 22498678 - 22498621
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaa 387  Q
    |||||||||| |||||||||||| ||| | | ||||||||||||| ||||||||||||    
T  22498678 tactaacaatctataaaaatcgatgtacaaccaaatttcataatcatccttattaaaa 22498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 22498738 - 22498681
Alignment:
Q  328 tatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaa 385  Q
    |||||||| ||||||| ||||| |||||| | |||||||||| |||||||||||||||    
T  22498738 tatactaaaaatatattaaaattgaagtacatcaaaatttcacaatcgtccttattaa 22498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 42858751 - 42858804
Alignment:
Q  393 gatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    |||||||||||||||  |||||||||||||||||| | | ||||||||||||||    
T  42858751 gatctccttaatttctcgtgcataatggtcattttacaatatttaatttatttg 42858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 372
Target Start/End: Original strand, 17761784 - 17761823
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataa 372  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  17761784 taacaatatataaaaatcgaagtacaacaaaatttcataa 17761823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 20406333 - 20406238
Alignment:
Q  115 tatcattaagtacaa-ttaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||| ||||||| || ||||||||||||| |||| ||| |||||| |  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  20406333 tatcattgagtacaaattcaaaataattataacacaaagagacaagttttagccgatatgaattttaagataattattaaccatgtgacatgtcat 20406238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 34987419 - 34987514
Alignment:
Q  115 tatcattaagtacaa-ttaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||| ||||||| || ||||||||||||| |||| ||| |||||| |  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  34987419 tatcattgagtacaaattcaaaataattataacacaaagagacaagttttagccgatatgaattttaagataattattaaccatgtgacatgtcat 34987514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 445
Target Start/End: Original strand, 347623 - 347787
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctac--attatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtcctt 380  Q
    |||||||||||||| |||||||||||||| || ||||||||||  |  | | |||||||||||||||||| ||||  | |||||||| |||||  |||||    
T  347623 acacgggcgaagtcatcactgatacaaatctactaacatctactaacaacaataacaatatataaaaatcaaagtccaccaaaattttataataatcctt 347722  T
Q  381 attaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttattt 445  Q
    |||||||||||| |||| |||||||||||||||||||| ||| |||| | || ||||||||||||    
T  347723 attaaaactcattatcttcttaatttcatgtgcataattgtcgtttttcaaagtttaatttattt 347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 23212449 - 23212335
Alignment:
Q  95 gtattatacacgggacatgatatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaat 193  Q
    ||||||||||||||| ||| ||||||| ||||||| |||||||||||||||| |||| || ||||||||| ||||| ||||||||||||||||||||||     
T  23212449 gtattatacacgggatatgttatcattgagtacaaattaaaaataattataacacaacagacaagttgtcgctgatataaatttcaagataattattaac 23212350  T
Q  194 catgtgacatgtcat 208  Q
     |||||||| |||||    
T  23212349 tatgtgacaagtcat 23212335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 23212797 - 23212681
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||| |||||  | ||||||||||| ||| ||| ||||||||| ||  |||| ||||||||||||||||| ||||| |||||||    
T  23212797 tactaacaatatataaaaattgaagttcatcaaaatttcattatcatccatattaaaacccactatcttcttaatttcatgtgcatgatggttattttgc 23212698  T
Q  430 caaatttaatttatttg 446  Q
     ||||||||||||||||    
T  23212697 aaaatttaatttatttg 23212681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 38858231 - 38858151
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatt 440  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||    
T  38858231 caaaatttcataatcttccttattaaaactcatgatctccttaatatcatgtgcataatggtcattttataaaatttaatt 38858151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 348439 - 348545
Alignment:
Q  287 gggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaa 386  Q
    ||||||||| ||||||||||||||| || ||||||||| ||| | ||||||||||||||||||| |||| ||||||| |||||||||| |||||||||||    
T  348439 gggcgaagtagtcactgatacaaatctactaacatcta-attctgctaacaatatataaaaatcaaagtctagcaaattttcataatcatccttattaaa 348537  T
Q  387 actcatga 394  Q
    ||| ||||    
T  348538 actaatga 348545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 348297 - 348376
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  348297 taacaatatataaaaatcaaagtccaccaaaatttcataatcgtccttattaaaactcattatcttcttaatttcatgtg 348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 5602214 - 5602352
Alignment:
Q  283 acacgggcgaagtcgt-cactgatacaaatatattaacatctacattatactaacaata---------tataaaaatcgaagtatagcaaaatttcataa 372  Q
    |||||||||||||||| ||||||||||||| || |||||||||| || |||||||||||         |||||||||| ||||  | |||||||||||||    
T  5602214 acacgggcgaagtcgttcactgatacaaatctactaacatctac-ttctactaacaataataataatatataaaaatcaaagtccaccaaaatttcataa 5602312  T
Q  373 tcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
     ||||||||||||||||||| |||| ||| ||||||||||    
T  5602313 ccgtccttattaaaactcattatcttctttatttcatgtg 5602352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 347999 - 348099
Alignment:
Q  109 acatgatatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtca 207  Q
    ||||| |||||||| |||||| || ||||||||||||| | ||||| |||||| ||| | || ||||||| |||||||||||||| ||||||||||||||    
T  347999 acatgttatcattaggtacaaatttaaaataattataacaaaagagacaagttttcattaatataaatttgaagataattattaaccatgtgacatgtca 348098  T
Q  208 t 208  Q
    |    
T  348099 t 348099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 5601084 - 5601193
Alignment:
Q  97 attatacacgggacatgatatcattaagtacaa-ttaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaatca 195  Q
    ||||||||| | | ||| ||||||| ||||||| || ||||||| ||||| | ||||| |||||||| |||||| |||||||  ||||||||||||| ||    
T  5601084 attatacactgcatatgttatcattgagtacaaattcaaaataactataacaaaagagacaagttgtaactgatataaattttgagataattattaacca 5601183  T
Q  196 tgtgacatgt 205  Q
    ||||| ||||    
T  5601184 tgtgagatgt 5601193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 346758 - 346839
Alignment:
Q  128 aattaaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||| ||||||||||||| |||| ||| ||||||||  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  346758 aattcaaaataattataacacaaagagacaagttgtagccgatatgaattttaagataattattaaccatgtgacatgtcat 346839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 347152 - 347205
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  347152 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 347205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 13103173 - 13103226
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  13103173 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 13103226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 347439 - 347491
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    |||||||||||||||||||||||||||| |||  || | ||||||||||||||    
T  347439 caaaatttcataatcgtccttattaaaattcactattttcttaatttcatgtg 347491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 5601595 - 5601659
Alignment:
Q  128 aattaaaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattattaa 192  Q
    ||||||||||||||| || | || |||||||||||| || || ||||| ||||||||||||||||    
T  5601595 aattaaaaataattacaacataataggcaagttgtcgctcatataaatatcaagataattattaa 5601659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 19178932 - 19178874
Alignment:
Q  133 aaaataattataatacaagaggcaagttgtcactgatctaaatttcaagataattatta 191  Q
    ||||||||||||||||| ||| || |||||||||||| ||||||  || ||||||||||    
T  19178932 aaaataattataatacacgagacatgttgtcactgatataaattataaaataattatta 19178874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 5602036 - 5602073
Alignment:
Q  171 taaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  5602036 taaatttcaagataataattaaccatgtgacatgtcat 5602073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 4e-30; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 29700014 - 29700113
Alignment:
Q  347 aatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttatttg 446  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |||||| |||||||||    
T  29700014 aatcgaagttcagcaaaatttcataattgtccttattaaaactcatgatctctttaatttaatgtgcataatggtcattttgataaatttcatttatttg 29700113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 330 - 440
Target Start/End: Original strand, 34903163 - 34903273
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||  |||||||||||||||||  || |||||||||||| ||||| |||||||||| ||||||| |||||||| |||||||||||| |||||||||    
T  34903163 tactaaccgtatataaaaatcgaagtcgagtaaaatttcataaccgtccatattaaaacttatgatcttcttaattttatgtgcataatgatcattttgc 34903262  T
Q  430 caaatttaatt 440  Q
     ||||||||||    
T  34903263 aaaatttaatt 34903273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 43763042 - 43762952
Alignment:
Q  352 aagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||||  || |||||||||    
T  43763042 aagtatagcaaaatttcataatcgtcctctttaaagctcatgatctccttaatttaatgtgcataatggtcattttgaaaattttaattta 43762952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 442
Target Start/End: Complemental strand, 18208671 - 18208558
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtc-attttg 428  Q
    |||||||||||||||||| | |||||| |  || ||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||  |||||    
T  18208671 tactaacaatatataaaagttgaagtacaataagatttcataatcgtcctctttaaaactcatgatctccttaattttatgtggataatggtcgtttttg 18208572  T
Q  429 ccaaatttaattta 442  Q
    | ||||||||||||    
T  18208571 caaaatttaattta 18208558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 445
Target Start/End: Complemental strand, 7731325 - 7731214
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| |||| || ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  7731325 taacaatatataaaaatcaaagtctaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 7731227  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  7731226 gtttaatttattt 7731214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 37392464 - 37392575
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| |||| || ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  37392464 taacaatatataaaaatcaaagtctaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 37392562  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  37392563 gtttaatttattt 37392575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 330 - 429
Target Start/End: Complemental strand, 29700591 - 29700495
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||||||||| || ||||||||||||||  ||||| |||||||||   |||||||||| || | ||||||||||||||||||||    
T  29700591 tactaacaatatataaaaatcgaagtttaacaaaatttcataattttccttgttaaaactc---atctccttaactttacgtgcataatggtcattttgc 29700495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 41770963 - 41771074
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | ||||||||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  41770963 taacaatatataaaaatcaaagtccaccaaaatttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 41771061  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  41771062 gtttaatttattt 41771074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 330 - 438
Target Start/End: Complemental strand, 43473208 - 43473100
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    |||||||||||||||||||||| | |  |||||||||| ||||| |||||| |||||| |||| |||| ||||||||||||||  |||||||| ||||||    
T  43473208 tactaacaatatataaaaatcgtactccagcaaaattttataattgtcctttttaaaaatcattatcttcttaatttcatgtgtttaatggtctttttgc 43473109  T
Q  430 caaatttaa 438  Q
     ||||||||    
T  43473108 aaaatttaa 43473100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 442
Target Start/End: Complemental strand, 46997735 - 46997657
Alignment:
Q  364 atttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    |||||||||||||| || ||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||||||||||    
T  46997735 atttcataatcgtcttttttaaaactcatgatctcattaattttatgtgcataattgtcattttacaaaatttaattta 46997657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 446
Target Start/End: Complemental strand, 17190528 - 17190416
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||||||||| | |||| |||  |||||||||||||||||||||    ||||||||||||  |||||||||  || ||||||| ||    
T  17190528 taacaatatataaaaatcgaagtacaacaaagtttt-taatcgtccttattaaaactcggagtctccttaattttgtgtgcataacagtaattttgcaaa 17190430  T
Q  433 atttaatttatttg 446  Q
    ||||||||||||||    
T  17190429 atttaatttatttg 17190416  T

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Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 428
Target Start/End: Complemental strand, 43763273 - 43763181
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttg 428  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||      ||||||||||||||||||||||||| || | ||||| ||||||||||    
T  43763273 tactaacaatatataaaaattgaagtacaacaaaatttcataatcg------ttaaaactcatgatctccttaattttatatccataacggtcattttg 43763181  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 442
Target Start/End: Original strand, 48217766 - 48217856
Alignment:
Q  352 aagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    ||||| ||||||||||||||||||||||  |||||| | |||||||||||||||| ||||||||||| || ||||||| | ||||| ||||    
T  48217766 aagtacagcaaaatttcataatcgtcctctttaaaattaatgatctccttaattttatgtgcataattgttattttgcaagatttatttta 48217856  T

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Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 39313487 - 39313411
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    |||||||||||||||||||||||| |  |  |||||||||||| |||||||||||||||| || |||||||||||||    
T  39313487 tactaacaatatataaaaatcgaaatccaataaaatttcataaccgtccttattaaaactaattatctccttaattt 39313411  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 446
Target Start/End: Complemental strand, 39313644 - 39313524
Alignment:
Q  323 tacattatactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtc 422  Q
    |||||| ||||||||||||| |||||||  |||  | ||||||| ||||||| ||||||||||||| ||| || |||||||||| |||||  |||  |||    
T  39313644 tacattctactaacaatata-aaaaatc--agtccaacaaaattacataatcatccttattaaaacacataatttccttaattttatgtgtctaaatgtc 39313548  T
Q  423 attttgccaaatttaatttatttg 446  Q
    ||||||| ||||||||||||||||    
T  39313547 attttgcaaaatttaatttatttg 39313524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 429
Target Start/End: Complemental strand, 11332804 - 11332735
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||| | ||||||  |||||| |||||||||||||||||| |||||||||||| |||||||||    
T  11332804 caaaatttcatgaccgtcctatttaaaattcatgatctccttaattttatgtgcataatgatcattttgc 11332735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 429
Target Start/End: Complemental strand, 11490825 - 11490756
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgc 429  Q
    ||||||||||| | ||||||  |||||| |||||||||||||||||| |||||||||||| |||||||||    
T  11490825 caaaatttcatgaccgtcctatttaaaattcatgatctccttaattttatgtgcataatgatcattttgc 11490756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 11332087 - 11332027
Alignment:
Q  382 ttaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    |||||| |||||||||||||||||| | |||||||||| ||||||||| ||||||||||||    
T  11332087 ttaaaattcatgatctccttaattttacgtgcataatgatcattttgcaaaatttaattta 11332027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 442
Target Start/End: Complemental strand, 11490108 - 11490048
Alignment:
Q  382 ttaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaattta 442  Q
    |||||| |||||||||||||||||| | |||||||||| ||||||||| ||||||||||||    
T  11490108 ttaaaattcatgatctccttaattttacgtgcataatgatcattttgcaaaatttaattta 11490048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 29700211 - 29700326
Alignment:
Q  330 tactaacaatatataaaaatcgaagt--atagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcatttt 427  Q
    ||||||||||||||||||||| || |  ||| ||||||||  |||||||||||||||||||| | |||| || |||||| || ||||| |||| ||||||    
T  29700211 tactaacaatatataaaaatcaaactccata-caaaattt--taatcgtccttattaaaactgacgatcgccgtaattttatttgcattatggccatttt 29700307  T
Q  428 gccaaatttaatttatttg 446  Q
    || ||| ||||||||||||    
T  29700308 gcaaaaattaatttatttg 29700326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 7731624 - 7731515
Alignment:
Q  303 gatacaaatatattaacatctacattatactaacaatatataaa-aatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctcctt 401  Q
    ||||||||| || ||||||||| ||| ||||||||||||||| | |||||||||    |||||||| |||| |||||||||||||| |||  |||| |||    
T  7731624 gatacaaatttactaacatcta-attctactaacaatatatatataatcgaagtccttcaaaattttataaccgtccttattaaaattcactatcttctt 7731526  T
Q  402 aatttcatgtg 412  Q
    |||||||||||    
T  7731525 aatttcatgtg 7731515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 30879706 - 30879612
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcat 424  Q
    |||||||||||||| ||| | |||||| | |||||||| |||||||||||  |||||| | ||||| |||||||||| || ||||||||| ||||    
T  30879706 tactaacaatatatgaaagttgaagtacaacaaaattttataatcgtcctctttaaaatttatgatatccttaattttatttgcataatgatcat 30879612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 37392165 - 37392274
Alignment:
Q  303 gatacaaatatattaacatctacattatactaacaatatataaa-aatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctcctt 401  Q
    ||||||||| ||  ||||||||| || ||||||||||||||| | |||||||||    ||||||||||||| |||||||||||||| |||  |||| |||    
T  37392165 gatacaaatttaccaacatctac-ttctactaacaatatatatataatcgaagtccttcaaaatttcataaccgtccttattaaaattcactatcttctt 37392263  T
Q  402 aatttcatgtg 412  Q
    |||||||||||    
T  37392264 aatttcatgtg 37392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 445
Target Start/End: Original strand, 29700791 - 29700878
Alignment:
Q  358 agcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaatttattt 445  Q
    ||||||||||| ||||| | ||||||||||||   |||||||| ||||| || ||||||||||| ||||||  |||||| ||||||||    
T  29700791 agcaaaatttcttaatcattcttattaaaactggggatctcctaaatttaatatgcataatggttattttgtaaaatttcatttattt 29700878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 440
Target Start/End: Complemental strand, 13708063 - 13708013
Alignment:
Q  390 catgatctccttaatttcatgtgcataatggtcattttgccaaatttaatt 440  Q
    |||||||| |||||||| |||||||||||||||||||||| | ||||||||    
T  13708063 catgatctacttaatttaatgtgcataatggtcattttgcaatatttaatt 13708013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 32035268 - 32035190
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgt 411  Q
    ||||||||||||||||||| | |    |||||||||||||| |||||| ||||||| |||||||| |||||||| ||||    
T  32035268 taacaatatataaaaatcgcactcctccaaaatttcataattgtcctttttaaaacccatgatcttcttaattttatgt 32035190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 4294643 - 4294590
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  4294643 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 4294590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 30879610 - 30879510
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgt-----ccttattaaaactcatgatctccttaatttcatgtgcataatggtcat 424  Q
    |||||||||||||| ||| | |||||| | ||||||||||||||| |     |||  |||||| ||||||| |||||||||| |||||||||||||||||    
T  30879610 tactaacaatatatgaaagttgaagtacaacaaaatttcataatcatatcatcctctttaaaa-tcatgatatccttaattttatgtgcataatggtcat 30879512  T
Q  425 tt 426  Q
    ||    
T  30879511 tt 30879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 37391930 - 37391983
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  37391930 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 37391983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 41770433 - 41770486
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  41770433 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 41770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 46390501 - 46390448
Alignment:
Q  155 caagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||| || || |||||||||| ||||||||||| |||||||||||||||    
T  46390501 caagttgtcgctcatataaatttcaaaataattattaaccatgtgacatgtcat 46390448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 41770721 - 41770773
Alignment:
Q  360 caaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtg 412  Q
    ||||||||||||| |||||||||||||| |||  |||| ||||||||||||||    
T  41770721 caaaatttcataaccgtccttattaaaattcactatcttcttaatttcatgtg 41770773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 7731448 - 7731406
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctac 325  Q
    |||||||||||||||| |||||||||||| || ||||||||||    
T  7731448 acacgggcgaagtcgttactgatacaaatctactaacatctac 7731406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 41770840 - 41770882
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctac 325  Q
    |||||||||||||||| |||||||||||| || ||||||||||    
T  41770840 acacgggcgaagtcgttactgatacaaatctactaacatctac 41770882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 7732023 - 7731947
Alignment:
Q  288 ggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaat 365  Q
    |||||| | ||||||||||||||| || |||||||||| || | |||||||||| |||||| ||||||  ||||||||    
T  7732023 ggcgaaattgtcactgatacaaatctactaacatctac-ttcttctaacaatatctaaaaaacgaagttcagcaaaat 7731947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 24551785 - 24551736
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttat 382  Q
    ||||| ||||||||||| ||||||||  ||||||| ||||||||||||||    
T  24551785 taacagtatataaaaattgaagtataataaaattttataatcgtccttat 24551736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 41770103 - 41770180
Alignment:
Q  132 aaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||||||||||||| |||| ||| |||||| |  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  41770103 aaaaataattataacacaaagagacaagttttagccgatatgaattttaagataattattaaccatgtgacatgtcat 41770180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 41770264 - 41770340
Alignment:
Q  288 ggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaat 365  Q
    |||||| | ||||||||||||||| || |||||||||| || | |||||||||| |||||| ||||||  ||||||||    
T  41770264 ggcgaaattgtcactgatacaaatctactaacatctac-ttcttctaacaatatctaaaaaacgaagtccagcaaaat 41770340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 46390671 - 46390595
Alignment:
Q  288 ggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatataaaaatcgaagtatagcaaaat 365  Q
    |||||| | ||||||||||||||| || |||||||||| || | |||||||||| |||||| ||||||  ||||||||    
T  46390671 ggcgaaattgtcactgatacaaatctactaacatctac-ttcttctaacaatatttaaaaaacgaagtccagcaaaat 46390595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 46392030 - 46391953
Alignment:
Q  132 aaaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    |||||||||||||| |||| ||| |||||| |  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  46392030 aaaaataattataacacaaagagacaagttttagccgatatgaattttaagataattattaaccatgtgacatgtcat 46391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 37391582 - 37391658
Alignment:
Q  133 aaaataattataatacaa-gaggcaagttgtcactgatctaaatttcaagataattattaatcatgtgacatgtcat 208  Q
    ||||||||||||| |||| ||| |||||| |  | ||| | ||||| |||||||||||||| |||||||||||||||    
T  37391582 aaaataattataacacaaagagacaagttttagccgatatgaattttaagataattattaaccatgtgacatgtcat 37391658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 440
Target Start/End: Complemental strand, 14911497 - 14911384
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtcct---tattaaaactcatgatctccttaatttcatgtgcataatggtcattt 426  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| |||||   |||||||| |||||||||||||||| | |||||||| |||| |||||    
T  14911497 tactaacaatatataaaaatcgaagtccagcaaaattttataattgtcctccttattaaaattcatgatctccttaatattatgtgcatgatggacattt 14911398  T
Q  427 tgccaaatttaatt 440  Q
    ||| ||| ||||||    
T  14911397 tgcaaaaattaatt 14911384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 446
Target Start/End: Complemental strand, 12275158 - 12275046
Alignment:
Q  334 aacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaa 433  Q
    ||||||||||||||| ||||||     |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||  ||| | |||    
T  12275158 aacaatatataaaaaccgaagttcgataaaatttcataatcatcgttattaaaactcatgatctccttaattttatgtgcataattgtctgtttacaaaa 12275059  T
Q  434 tttaatttatttg 446  Q
    ||| |||||||||    
T  12275058 ttttatttatttg 12275046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 445
Target Start/End: Original strand, 26591335 - 26591441
Alignment:
Q  339 tatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaaatttaa 438  Q
    ||||||||||| ||||||  | |||||||||||||  || ||||| ||||||||||||||||||| || ||||||||||||||  |||||  ||||||||    
T  26591335 tatataaaaattgaagtacggaaaaatttcataattatcattattcaaactcatgatctccttaaatttatgtgcataatggttgttttgagaaatttaa 26591434  T
Q  439 tttattt 445  Q
    |||||||    
T  26591435 tttattt 26591441  T

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Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 15152302 - 15152372
Alignment:
Q  333 taacaatatataaa-aatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctcctta 402  Q
    |||||||||||||| ||||||| ||||| ||||||| |||||||| ||| |||||||||||||||||||||    
T  15152302 taacaatatataaagaatcgaattatagaaaaattttataatcgttcttgttaaaactcatgatctcctta 15152372  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 14911272 - 14911197
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    |||||| ||||||||||||||||||| ||| ||||||| |||||||| |||||||| ||  |||||||||| |||||    
T  14911272 tactaataatatataaaaatcgaagtctagtaaaatttaataatcgt-cttattaatacgaatgatctcctaaattt 14911197  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 405
Target Start/End: Original strand, 26591552 - 26591627
Alignment:
Q  330 tactaacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatt 405  Q
    |||||| | ||||||||||||||||| ||  ||||||||||||| ||| |||| ||||| |||| |||||||||||    
T  26591552 tactaaaagtatataaaaatcgaagtctaaaaaaatttcataattgtctttatcaaaacacatgttctccttaatt 26591627  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 12260025 - 12260098
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaattt 406  Q
    ||||| |||||||| ||| || || | |||||||||||||| ||| ||||||||| ||| ||||||||||||||    
T  12260025 taacattatataaatatcaaaatacaacaaaatttcataattgtcattattaaaattcaagatctccttaattt 12260098  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 13044208 - 13044268
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatata 344  Q
    ||||||||||||||||  ||||||||||| || |||||||||| || |||||||||||||||    
T  13044208 acacgggcgaagtcgtatctgatacaaatttactaacatctac-ttctactaacaatatata 13044268  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 13060230 - 13060290
Alignment:
Q  283 acacgggcgaagtcgtcactgatacaaatatattaacatctacattatactaacaatatata 344  Q
    ||||||||||||||||  ||||||||||| || |||||||||| || |||||||||||||||    
T  13060230 acacgggcgaagtcgtacctgatacaaatctactaacatctac-ttctactaacaatatata 13060290  T

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Target: scaffold2013 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold2013
Description:

Target: scaffold2013; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 445
Target Start/End: Original strand, 499 - 610
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    |||||||||||||||||| ||||  | |||| |||||||||  ||||||||||||||||| |||| |||||||| ||||||||||| | |||||| | ||    
T  499 taacaatatataaaaatcaaagtccaccaaattttcataataatccttattaaaactcattatcttcttaatttaatgtgcataattg-catttttcaaa 597  T
Q  433 atttaatttattt 445  Q
     ||||||||||||    
T  598 gtttaatttattt 610  T

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Target: scaffold1694 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 811 - 706
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||||||| | | |||| ||||||||||| |||||||| |  ||||||    |||||||||| |||| |||||||||||||| ||||| | ||    
T  811 taacaatatataaaagttggagtacagcaaaatttcgtaatcgtcgtctttaaaa---ttgatctcctt-attttatgtgcataatggtgattttacaaa 716  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  715 atttaattta 706  T

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Target: scaffold1195 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1195
Description:

Target: scaffold1195; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 2216 - 2321
Alignment:
Q  333 taacaatatataaaaatcgaagtatagcaaaatttcataatcgtccttattaaaactcatgatctccttaatttcatgtgcataatggtcattttgccaa 432  Q
    ||||||||||||||| | | |||| ||||||||||| |||||||| |  ||||||    |||||||||| |||| |||||||||||||| ||||| | ||    
T  2216 taacaatatataaaagttggagtacagcaaaatttcgtaatcgtcgtctttaaaa---ttgatctcctt-attttatgtgcataatggtgattttacaaa 2311  T
Q  433 atttaattta 442  Q
    ||||||||||    
T  2312 atttaattta 2321  T

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