View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12043_high_5 (Length: 378)

Name: NF12043_high_5
Description: NF12043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12043_high_5
NF12043_high_5
[»] chr7 (39 HSPs)
chr7 (132-360)||(22760910-22761138)
chr7 (111-163)||(17041010-17041062)
chr7 (129-187)||(20468298-20468356)
chr7 (132-189)||(11700212-11700268)
chr7 (132-189)||(18056747-18056804)
chr7 (109-189)||(5579206-5579286)
chr7 (134-189)||(13106754-13106809)
chr7 (132-187)||(38374573-38374628)
chr7 (128-182)||(29538541-29538595)
chr7 (132-166)||(29916803-29916837)
chr7 (132-189)||(20335803-20335860)
chr7 (132-189)||(21877855-21877912)
chr7 (113-162)||(29785300-29785349)
chr7 (108-165)||(37473637-37473694)
chr7 (111-180)||(43215210-43215279)
chr7 (111-163)||(26459408-26459460)
chr7 (111-163)||(39631870-39631922)
chr7 (137-189)||(41487411-41487463)
chr7 (134-189)||(279926-279981)
chr7 (132-163)||(21558175-21558206)
chr7 (115-189)||(15137583-15137657)
chr7 (132-162)||(30301927-30301957)
chr7 (111-189)||(37085521-37085599)
chr7 (130-163)||(7744110-7744143)
chr7 (132-189)||(11720932-11720989)
chr7 (132-189)||(22308103-22308160)
chr7 (126-163)||(30217920-30217957)
chr7 (132-165)||(31835239-31835272)
chr7 (132-165)||(42712005-42712038)
chr7 (132-165)||(43590954-43590987)
chr7 (141-189)||(4572269-4572317)
chr7 (132-172)||(14058300-14058340)
chr7 (132-172)||(14368328-14368368)
chr7 (137-169)||(18891045-18891077)
chr7 (111-163)||(30442514-30442566)
chr7 (111-163)||(33222396-33222448)
chr7 (115-163)||(41519262-41519310)
chr7 (132-188)||(45709681-45709737)
chr7 (109-165)||(48039643-48039699)
[»] chr1 (30 HSPs)
chr1 (109-187)||(31605822-31605900)
chr1 (132-187)||(43446010-43446065)
chr1 (132-189)||(21392884-21392941)
chr1 (132-189)||(51814541-51814598)
chr1 (111-167)||(19528321-19528377)
chr1 (128-187)||(36428755-36428814)
chr1 (132-187)||(45266881-45266936)
chr1 (132-189)||(52029908-52029966)
chr1 (111-163)||(6650621-6650673)
chr1 (111-163)||(15786318-15786370)
chr1 (111-180)||(8177163-8177232)
chr1 (132-180)||(2799909-2799957)
chr1 (111-163)||(33700771-33700823)
chr1 (132-180)||(36371517-36371565)
chr1 (132-163)||(3265971-3266002)
chr1 (134-189)||(16893443-16893498)
chr1 (134-173)||(30203215-30203254)
chr1 (132-189)||(17297031-17297089)
chr1 (135-169)||(27430169-27430203)
chr1 (132-162)||(38947471-38947501)
chr1 (109-170)||(952535-952596)
chr1 (134-163)||(1247162-1247191)
chr1 (132-161)||(6122841-6122870)
chr1 (113-162)||(9117147-9117196)
chr1 (132-189)||(15065012-15065069)
chr1 (134-167)||(39966142-39966175)
chr1 (132-180)||(8904461-8904509)
chr1 (111-163)||(10526849-10526901)
chr1 (132-164)||(24019070-24019102)
chr1 (127-163)||(51281393-51281429)
[»] chr4 (36 HSPs)
chr4 (132-187)||(46295144-46295199)
chr4 (132-189)||(20281164-20281221)
chr4 (108-183)||(32992635-32992710)
chr4 (128-189)||(38838840-38838901)
chr4 (128-184)||(5795386-5795442)
chr4 (111-173)||(30938207-30938269)
chr4 (111-161)||(38869794-38869844)
chr4 (112-166)||(39509097-39509151)
chr4 (111-189)||(55427172-55427250)
chr4 (134-187)||(2732043-2732096)
chr4 (132-189)||(19238549-19238606)
chr4 (111-180)||(37109332-37109401)
chr4 (132-180)||(2185013-2185061)
chr4 (111-163)||(7949452-7949504)
chr4 (111-163)||(23377982-23378034)
chr4 (132-188)||(49576867-49576923)
chr4 (128-163)||(7539633-7539668)
chr4 (132-187)||(8325353-8325408)
chr4 (132-186)||(19229183-19229237)
chr4 (111-189)||(37274431-37274509)
chr4 (132-166)||(44865381-44865415)
chr4 (132-178)||(46329211-46329257)
chr4 (111-189)||(51250494-51250572)
chr4 (287-324)||(7073713-7073750)
chr4 (132-161)||(9693498-9693527)
chr4 (109-166)||(37980143-37980199)
chr4 (132-165)||(47044764-47044797)
chr4 (132-185)||(51622532-51622585)
chr4 (128-189)||(51954157-51954218)
chr4 (132-180)||(4249224-4249272)
chr4 (135-183)||(4483279-4483327)
chr4 (142-170)||(7011536-7011564)
chr4 (111-163)||(10048006-10048058)
chr4 (132-160)||(24991574-24991602)
chr4 (132-164)||(35644159-35644191)
chr4 (109-165)||(56409975-56410030)
[»] chr5 (17 HSPs)
chr5 (112-189)||(84851-84928)
chr5 (111-189)||(30000142-30000220)
chr5 (111-187)||(16457836-16457912)
chr5 (132-184)||(18974007-18974059)
chr5 (132-189)||(16773854-16773911)
chr5 (132-189)||(17155869-17155926)
chr5 (128-189)||(24907532-24907593)
chr5 (114-163)||(37258364-37258413)
chr5 (133-165)||(3315263-3315295)
chr5 (132-180)||(14285208-14285256)
chr5 (141-189)||(35705042-35705090)
chr5 (132-163)||(25627104-25627135)
chr5 (132-163)||(43442243-43442274)
chr5 (111-189)||(29692358-29692436)
chr5 (128-165)||(24895078-24895115)
chr5 (134-163)||(25979219-25979248)
chr5 (132-180)||(34984853-34984901)
[»] chr2 (27 HSPs)
chr2 (132-189)||(14780553-14780610)
chr2 (132-189)||(37480122-37480179)
chr2 (111-189)||(42327367-42327445)
chr2 (132-189)||(19244156-19244213)
chr2 (132-189)||(23052495-23052552)
chr2 (109-189)||(26482117-26482196)
chr2 (132-187)||(41908612-41908667)
chr2 (132-165)||(29503318-29503351)
chr2 (111-163)||(4262300-4262352)
chr2 (132-180)||(13803542-13803590)
chr2 (131-187)||(20217862-20217918)
chr2 (110-173)||(6099507-6099569)
chr2 (128-163)||(40416388-40416423)
chr2 (111-161)||(12086129-12086179)
chr2 (109-187)||(30359678-30359755)
chr2 (132-166)||(39715039-39715073)
chr2 (111-189)||(42602580-42602658)
chr2 (126-163)||(11251128-11251165)
chr2 (108-165)||(12517749-12517806)
chr2 (140-173)||(16525232-16525265)
chr2 (132-189)||(19016078-19016135)
chr2 (132-161)||(21195676-21195705)
chr2 (132-189)||(25637198-25637255)
chr2 (130-163)||(30808645-30808678)
chr2 (132-169)||(40791482-40791519)
chr2 (132-189)||(42860395-42860452)
chr2 (111-187)||(21213795-21213871)
[»] chr3 (38 HSPs)
chr3 (109-189)||(19716221-19716301)
chr3 (111-189)||(51903850-51903928)
chr3 (132-189)||(54990749-54990806)
chr3 (111-186)||(47236946-47237021)
chr3 (115-189)||(4844483-4844557)
chr3 (115-189)||(4870179-4870253)
chr3 (128-186)||(8796068-8796126)
chr3 (111-189)||(10445111-10445189)
chr3 (111-189)||(10499081-10499159)
chr3 (113-163)||(30311334-30311384)
chr3 (111-173)||(47454605-47454667)
chr3 (132-189)||(39976403-39976460)
chr3 (111-180)||(46518654-46518723)
chr3 (130-178)||(31587733-31587781)
chr3 (132-163)||(14186694-14186725)
chr3 (112-163)||(30510197-30510248)
chr3 (132-163)||(37788463-37788494)
chr3 (135-173)||(13174949-13174987)
chr3 (111-165)||(14339636-14339690)
chr3 (132-170)||(17108889-17108927)
chr3 (114-180)||(28703385-28703451)
chr3 (111-189)||(31520577-31520655)
chr3 (115-173)||(39253727-39253785)
chr3 (143-173)||(40268546-40268576)
chr3 (109-187)||(44069782-44069860)
chr3 (132-173)||(11612346-11612387)
chr3 (110-167)||(16900675-16900732)
chr3 (141-186)||(18319137-18319182)
chr3 (132-189)||(20501743-20501799)
chr3 (132-189)||(30232377-30232434)
chr3 (111-180)||(40063645-40063714)
chr3 (112-189)||(44743827-44743904)
chr3 (111-163)||(4222167-4222219)
chr3 (132-160)||(15048062-15048090)
chr3 (132-164)||(17035033-17035065)
chr3 (109-189)||(26871476-26871556)
chr3 (128-160)||(45308903-45308935)
chr3 (132-180)||(53412992-53413040)
[»] scaffold0194 (1 HSPs)
scaffold0194 (111-186)||(13021-13096)
[»] chr6 (15 HSPs)
chr6 (128-187)||(24333999-24334058)
chr6 (132-189)||(34444850-34444907)
chr6 (111-166)||(10338169-10338224)
chr6 (132-189)||(6385909-6385966)
chr6 (109-165)||(14557986-14558042)
chr6 (111-173)||(33549130-33549192)
chr6 (132-189)||(10650011-10650068)
chr6 (134-187)||(23242035-23242088)
chr6 (130-162)||(1906538-1906570)
chr6 (119-163)||(9626066-9626110)
chr6 (128-180)||(11306155-11306207)
chr6 (128-188)||(17328237-17328297)
chr6 (111-163)||(24617105-24617156)
chr6 (127-183)||(27776250-27776306)
chr6 (111-163)||(28841440-28841492)
[»] scaffold0172 (1 HSPs)
scaffold0172 (111-189)||(15749-15827)
[»] scaffold0004 (1 HSPs)
scaffold0004 (126-180)||(81545-81599)
[»] chr8 (25 HSPs)
chr8 (111-189)||(968388-968466)
chr8 (111-189)||(2203518-2203596)
chr8 (132-189)||(28783107-28783164)
chr8 (126-180)||(33017255-33017309)
chr8 (132-165)||(19703483-19703516)
chr8 (109-173)||(6530831-6530894)
chr8 (111-163)||(6536546-6536598)
chr8 (135-187)||(8059682-8059734)
chr8 (111-163)||(35690062-35690114)
chr8 (109-168)||(3524394-3524453)
chr8 (132-187)||(11793495-11793550)
chr8 (132-187)||(22193338-22193393)
chr8 (127-166)||(28787491-28787530)
chr8 (126-161)||(33727873-33727908)
chr8 (132-167)||(36205242-36205277)
chr8 (111-189)||(29858021-29858099)
chr8 (126-163)||(8794343-8794380)
chr8 (132-161)||(11819823-11819852)
chr8 (111-164)||(16852366-16852419)
chr8 (132-161)||(27750777-27750806)
chr8 (111-163)||(3624606-3624658)
chr8 (126-162)||(11928730-11928766)
chr8 (137-189)||(18540350-18540402)
chr8 (131-163)||(18546360-18546392)
chr8 (135-163)||(43594316-43594344)
[»] scaffold0180 (1 HSPs)
scaffold0180 (128-163)||(19960-19995)
[»] scaffold0291 (1 HSPs)
scaffold0291 (132-166)||(2465-2499)
[»] scaffold0258 (1 HSPs)
scaffold0258 (111-189)||(15295-15373)
[»] scaffold0118 (1 HSPs)
scaffold0118 (128-189)||(41605-41666)
[»] scaffold0063 (1 HSPs)
scaffold0063 (111-180)||(35370-35439)
[»] scaffold0299 (1 HSPs)
scaffold0299 (111-163)||(11554-11606)
[»] scaffold0238 (1 HSPs)
scaffold0238 (132-163)||(2709-2740)
[»] scaffold0189 (1 HSPs)
scaffold0189 (140-187)||(17698-17745)
[»] scaffold0002 (1 HSPs)
scaffold0002 (135-173)||(132001-132039)


Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 132 - 360
Target Start/End: Original strand, 22760910 - 22761138
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaatcgcaacttaatttcacaattattcacataacagctcctcact 231  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22760910 tgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgagtgggctaatcgcaacttaatttcacaattattcacataacagctcctcact 22761009  T
Q  232 attaatttgaatactatgtgcattggcattactattttgtagggaattctgcaatatggtgagaagaattttcatttgttccagccaagatgtgcacaaa 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22761010 attaatttgaatactatgtgcattggcattactattttgtagggaattctgcaatatggtgagaagaattttcatttgttccagccaagatgtgcacaaa 22761109  T
Q  332 atgagctcagggaccaaatcacctatctc 360  Q
    |||||||||||||||||||||||||||||    
T  22761110 atgagctcagggaccaaatcacctatctc 22761138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 17041062 - 17041010
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  17041062 ttggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctc 17041010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 20468356 - 20468298
Alignment:
Q  129 gtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||| |||| ||||||||    
T  20468356 gtatgctcgtcctcaaggtcttaggttcgattctcccagatgccaatttgggtgggcta 20468298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 11700212 - 11700268
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||||||||||| | | ||||| |||||||||||||||    
T  11700212 tgctcctcctcaaggtctcaggttcgattctctctg-tgccaatttgagtgggctaat 11700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 18056804 - 18056747
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||| ||||||||||||||||||||||||| ||| | |||| ||||||||||    
T  18056804 tgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggtgggctaat 18056747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 5579286 - 5579206
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||| |  | ||| |||||||||||||||||||||||| || |||||||| ||||| |||| ||||| ||||    
T  5579286 tgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtgggataat 5579206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 13106809 - 13106754
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||||||||| | ||||| | |||||| ||||||||    
T  13106809 ctcctcctcaaggtctcaggttcgattctctctgatgctaatttgagcgggctaat 13106754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 38374628 - 38374573
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||  ||||||||    
T  38374628 tgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggcta 38374573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 29538595 - 29538541
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtg 182  Q
    ||||| ||||| |||||||||||| ||||||||||||| ||||||| ||||||||    
T  29538595 agtatactccttctcaaggtctcaagttcgattctccctgatgccaatttgagtg 29538541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 29916837 - 29916803
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    |||||||||||||||||||||||||||||||||||    
T  29916837 tgctcctcctcaaggtctcaggttcgattctcccc 29916803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 20335860 - 20335803
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |||||||||||||||||||| |||||| || ||||  |||||||||    
T  20335860 tgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatgggctaat 20335803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 21877855 - 21877912
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||| ||||||||| |||||||||||| || |||||  ||||||||||||||    
T  21877855 tgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaat 21877912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 29785349 - 29785300
Alignment:
Q  113 ggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattct 162  Q
    |||||||||||  ||||| |||||||||||||||||||| ||||||||||    
T  29785349 ggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattct 29785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 37473637 - 37473694
Alignment:
Q  108 ttgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||| |||||||| || ||| ||||||||||  ||||||||||||||||||||||    
T  37473637 ttgttggtttgggatctaggagtttgctcctccttgaggtctcaggttcgattctccc 37473694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 43215210 - 43215279
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||||| |  | ||| |||||||||||||||||||||||||||||||| |  |||||| ||||||    
T  43215210 ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgag 43215279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 26459460 - 26459408
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| ||||||||||||||||||||||||||||||||    
T  26459460 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 26459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 39631870 - 39631922
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | |||| |||||||||||||||||||||||||||||||    
T  39631870 ttggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctc 39631922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 41487411 - 41487463
Alignment:
Q  137 ctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||||| |||| ||||| |||  ||||||||||    
T  41487411 ctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaat 41487463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 279981 - 279926
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||| |||||||||||||| |||||| ||| ||||| |||| ||||||||||    
T  279981 ctcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaat 279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 21558175 - 21558206
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  21558175 tgctcctcctcaaggtctcaggttcgattctc 21558206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 15137583 - 15137657
Alignment:
Q  115 cttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||  || ||| |||||||||||||||||||||||| ||||||| | | || || |||| ||||||||||    
T  15137583 cttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaat 15137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Original strand, 30301927 - 30301957
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattct 162  Q
    |||||||||||||||||||||||||||||||    
T  30301927 tgctcctcctcaaggtctcaggttcgattct 30301957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 37085599 - 37085521
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||   | ||| ||||| ||||| |||| |||||||||||||||||| || ||| ||| |||||||||||    
T  37085599 ttggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctccccaataccaatttaagtgggctaat 37085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 7744143 - 7744110
Alignment:
Q  130 tatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||||||||||||||| |||||||    
T  7744143 tatgctcctcctcaaggtctcaggtttgattctc 7744110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 11720989 - 11720932
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||| ||||| |||| |||||||||||||  ||||| |||| ||||||||||    
T  11720989 tgctcctccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaat 11720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 22308103 - 22308160
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||| | ||||||||||| ||||||| | ||||| || ||||||    
T  22308103 tgctcctcctcaaggtcttaagttcgattctcaccgatgcaaatttgaatgagctaat 22308160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 30217920 - 30217957
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  30217920 gaagtgtgctcctcctcaaggtctcaagttcgattctc 30217957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 31835239 - 31835272
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||||||||||||||||||| ||||    
T  31835239 tgctcctcctcaaggtctcaggttcgattatccc 31835272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 42712005 - 42712038
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccc 165  Q
    |||||||||||||||||||| |||||||||||||    
T  42712005 tgctcctcctcaaggtctcatgttcgattctccc 42712038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 43590954 - 43590987
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||| ||||||||||||||||||||    
T  43590954 tgctcctcctcaatgtctcaggttcgattctccc 43590987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 4572317 - 4572269
Alignment:
Q  141 tcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||||||||||| ||| || || |||| ||||||||||    
T  4572317 tcaaggtctcaggttcgattctctccggtgtcaatttgggtgggctaat 4572269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 14058300 - 14058340
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgcc 172  Q
    ||||| |||||||||||||||||||||||||| || |||||    
T  14058300 tgctcatcctcaaggtctcaggttcgattctctccaatgcc 14058340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 14368328 - 14368368
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgcc 172  Q
    ||||| |||||||||||||||||||||||||| || |||||    
T  14368328 tgctcatcctcaaggtctcaggttcgattctctccaatgcc 14368368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 18891045 - 18891077
Alignment:
Q  137 ctcctcaaggtctcaggttcgattctccccgat 169  Q
    ||||||||||||||||||| |||||||||||||    
T  18891045 ctcctcaaggtctcaggtttgattctccccgat 18891077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 30442514 - 30442566
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| |||||||||||||||||| |||||||||||||    
T  30442514 ttggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctc 30442566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 33222396 - 33222448
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  ||||| | ||| ||||||||||||||||||||||||||    
T  33222396 ttggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctc 33222448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 41519310 - 41519262
Alignment:
Q  115 cttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||  || ||| |||||||||||||||||||||||||| |||||    
T  41519310 cttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctc 41519262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 45709737 - 45709681
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaa 188  Q
    ||||||||||| ||||||||||||||||| || ||||| ||| |||  |||||||||    
T  45709737 tgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtgggctaa 45709681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 48039699 - 48039643
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    |||||||||| ||||  | ||||||||||| | ||||||||||||||| ||||||||    
T  48039699 tgttggcttgcgatcttggagtatgctccttcgcaaggtctcaggttctattctccc 48039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 31605900 - 31605822
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||||| |  ||||| |||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||||    
T  31605900 tgttggcttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggcta 31605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 43446010 - 43446065
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  43446010 tgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggcta 43446065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 21392884 - 21392941
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||    
T  21392884 tgctcctcctcaaggtctcaggttcgatcctcctctgtgccagtttgagtgggctaat 21392941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 51814541 - 51814598
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||    
T  51814541 tgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaat 51814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 19528377 - 19528321
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccg 167  Q
    ||||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||    
T  19528377 ttggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctccccg 19528321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 36428755 - 36428814
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| |||| ||||||||    
T  36428755 agtatgctcctcctcaaggtctcatgtttgattctccccggtgccaatttgggtgggcta 36428814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 45266881 - 45266936
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||    
T  45266881 tgctcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgggcta 45266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 52029966 - 52029908
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattct-ccccgatgccagtttgagtgggctaat 189  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  52029966 tgctccttctcaaggtctcaggttcgattctcccccgatgccaatttgggtgggctaat 52029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 6650621 - 6650673
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||||||    
T  6650621 ttggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctc 6650673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 15786370 - 15786318
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||  | ||| ||||||||||||||||||||||||||||||||    
T  15786370 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 15786318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 8177232 - 8177163
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||  | ||| |||||||||||||||| ||||||||||||||| | | ||||| ||||||    
T  8177232 ttggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgag 8177163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 2799909 - 2799957
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||||||||||||||||||||| | | ||||| ||||||    
T  2799909 tgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 2799957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 33700823 - 33700771
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||| |||  | ||| ||||||||||||||||||||||||||||||||    
T  33700823 ttggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 33700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 36371517 - 36371565
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||||||| ||||||||||||| | ||||||| ||||||    
T  36371517 tgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgag 36371565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 3265971 - 3266002
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  3265971 tgctcctcctcaaggtctcaggttcgattctc 3266002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 16893443 - 16893498
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||| ||||||||||||||||| || ||| || || |||||||||||||||    
T  16893443 ctcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaat 16893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 30203254 - 30203215
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  30203254 ctcctcctcaaggtctcaggttcaattctctccgatgcca 30203215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 17297031 - 17297089
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattct-ccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||| ||| |||||| ||||| ||||| |||| ||||||||||    
T  17297031 tgctcctcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggctaat 17297089  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 27430169 - 27430203
Alignment:
Q  135 tcctcctcaaggtctcaggttcgattctccccgat 169  Q
    |||| ||||||||||||||||||||||||||||||    
T  27430169 tccttctcaaggtctcaggttcgattctccccgat 27430203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 38947501 - 38947471
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattct 162  Q
    |||||||||||||||||||||||||||||||    
T  38947501 tgctcctcctcaaggtctcaggttcgattct 38947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 952535 - 952596
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatg 170  Q
    ||||||||||||| |  | ||| ||||| ||||||| |||||||||| ||||||||||||||    
T  952535 tgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatg 952596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 1247162 - 1247191
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||    
T  1247162 ctcctcctcaaggtctcaggttcgattctc 1247191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 6122841 - 6122870
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||||||||||||||||||||||||||||    
T  6122841 tgctcctcctcaaggtctcaggttcgattc 6122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 9117147 - 9117196
Alignment:
Q  113 ggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattct 162  Q
    |||||||||||  ||||| ||||||||||  |||||||||||||||||||    
T  9117147 ggcttgggatctggaagtgtgctcctccttgaggtctcaggttcgattct 9117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 15065012 - 15065069
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||| ||||||||||||||||||| ||| |||||| || || |||| ||||||||||    
T  15065012 tgctcatcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaat 15065069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 39966142 - 39966175
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccg 167  Q
    |||||||||||||||||||||||| |||||||||    
T  39966142 ctcctcctcaaggtctcaggttcgtttctccccg 39966175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 8904461 - 8904509
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||||||||| ||||||||||| | | ||||| ||||||    
T  8904461 tgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgag 8904509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 10526849 - 10526901
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| ||||||||||||||||||||| ||||||||||    
T  10526849 ttggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctc 10526901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 24019070 - 24019102
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcc 164  Q
    |||||||||||||||||| ||||||||||||||    
T  24019070 tgctcctcctcaaggtcttaggttcgattctcc 24019102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 51281393 - 51281429
Alignment:
Q  127 aagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||| |||||||||||||||||||||||| |||||||    
T  51281393 aagtgtgctcctcctcaaggtctcaggtttgattctc 51281429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 46295144 - 46295199
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  46295144 tgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggcta 46295199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 20281221 - 20281164
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||    
T  20281221 tgctcctcctcaaggtcccaggttcgatcctccccggtgccagtttgagtggactaat 20281164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 32992635 - 32992710
Alignment:
Q  108 ttgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgg 183  Q
    |||||||||||||| |  | ||| |||||||||||||||||||| ||||||||||||||| || || |||||||||    
T  32992635 ttgttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtgg 32992710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 38838840 - 38838901
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || |||  ||||||||||    
T  38838840 agtatgctcctcctcaaggtcttaggttcgattctctccgatggcaatttcggtgggctaat 38838901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 5795442 - 5795386
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtggg 184  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||| |||| |||||    
T  5795442 agtatgctcctcctcaaggtctcaggtttgattctccccagtgccaatttgggtggg 5795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 30938269 - 30938207
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    |||| ||||||||  | ||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  30938269 ttggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgcca 30938207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 38869794 - 38869844
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattc 161  Q
    |||||||||||||  | ||| ||||||||||||||||||||||||||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 38869844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 39509097 - 39509151
Alignment:
Q  112 tggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    ||||||||||||  | ||| ||||||||||| |||||||||||||||||||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctcccc 39509151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 55427250 - 55427172
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||| ||| ||||||||||||||||||||| || ||||| |||| ||||||||||    
T  55427250 ttggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtgggctaat 55427172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 2732043 - 2732096
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||| |||||||||||||||||| ||| ||||| |||| ||||||||    
T  2732043 ctcctcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggcta 2732096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 19238606 - 19238549
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| ||||||| |||||||||||||||| | ||| |||| ||||||||||    
T  19238606 tgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggctaat 19238549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 37109401 - 37109332
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||||| |  | ||| |||||||||||||||||||||||||||||||| | | ||||| ||||||    
T  37109401 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 37109332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 2185061 - 2185013
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||| ||||| |||||||||||||||||| ||||||||| ||||||    
T  2185061 tgctccttctcaaagtctcaggttcgattctctccgatgccaatttgag 2185013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 7949504 - 7949452
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| ||||||||||||||||||||||||||||||||    
T  7949504 ttggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctc 7949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 23377982 - 23378034
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| ||||||||||||||||||||||||||||||||    
T  23377982 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 23378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 49576923 - 49576867
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaa 188  Q
    |||||||||||||||||||||||||||||||| || ||| || |||| |||| ||||    
T  49576923 tgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggactaa 49576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 7539633 - 7539668
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7539633 agtatgctccttctcaaggtctcaggttcgattctc 7539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 8325408 - 8325353
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||| |||||||||||| ||||||||||||||||| || || |||| ||||||||    
T  8325408 tgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggtgggcta 8325353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 19229237 - 19229183
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggct 186  Q
    ||||||||||| |||||||||||||||||||||| | | ||| |||| |||||||    
T  19229237 tgctcctcctcgaggtctcaggttcgattctccctggtaccaatttgggtgggct 19229183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 37274509 - 37274431
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| |||||||||||||||||| ||||||||||||| | | ||| | ||| |||||||||||    
T  37274509 ttggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaat 37274431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 44865381 - 44865415
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    |||||||||||||||||| ||||||||||||||||    
T  44865381 tgctcctcctcaaggtcttaggttcgattctcccc 44865415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 46329211 - 46329257
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttg 178  Q
    |||||||||||||||| |||||||||||||| |||| ||||| ||||    
T  46329211 tgctcctcctcaaggtatcaggttcgattcttcccggtgccaatttg 46329257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 51250572 - 51250494
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||  | ||| |||||| ||||||| ||||| ||||||||| | ||| ||||| |||| ||||||||||    
T  51250572 ttggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaat 51250494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 7073750 - 7073713
Alignment:
Q  287 atggtgagaagaattttcatttgttccagccaagatgt 324  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  7073750 atggtaagaagaatcttcatttgttccagccaagatgt 7073713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 9693527 - 9693498
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||||||||||||||||||||||||||||    
T  9693527 tgctcctcctcaaggtctcaggttcgattc 9693498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 37980199 - 37980143
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    ||||||||||||| |  | ||| |||||||| ||||||||||||||||||||||||||    
T  37980199 tgttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctcccc 37980143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 47044764 - 47044797
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||| ||||||||||||||||||||||    
T  47044764 tgctcctcctcgaggtctcaggttcgattctccc 47044797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 51622532 - 51622585
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggc 185  Q
    ||||||||||||||||||||||||||| |||| | | ||||| |||| ||||||    
T  51622532 tgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggc 51622585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 51954157 - 51954218
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||| |||||||||||| |||| || ||| || || |||| ||||||||||    
T  51954157 agtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaat 51954218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 4249224 - 4249272
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||||||||||||| ||||||| | | ||||| ||||||    
T  4249224 tgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgag 4249272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 4483327 - 4483279
Alignment:
Q  135 tcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgg 183  Q
    |||||||||||||||||||||| |||||  ||| |||| ||||||||||    
T  4483327 tcctcctcaaggtctcaggttcaattctttccggtgcctgtttgagtgg 4483279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 170
Target Start/End: Original strand, 7011536 - 7011564
Alignment:
Q  142 caaggtctcaggttcgattctccccgatg 170  Q
    |||||||||||||||||||||||||||||    
T  7011536 caaggtctcaggttcgattctccccgatg 7011564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 10048006 - 10048058
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| | |  ||||||||||| |||| |||||||||||||||||||    
T  10048006 ttggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctc 10048058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 24991574 - 24991602
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgatt 160  Q
    |||||||||||||||||||||||||||||    
T  24991574 tgctcctcctcaaggtctcaggttcgatt 24991602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 35644191 - 35644159
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcc 164  Q
    ||||||||||||| |||||||||||||||||||    
T  35644191 tgctcctcctcaacgtctcaggttcgattctcc 35644159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 56409975 - 56410030
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||| |  | ||| |||||||| |||||||||||||||||||||||||    
T  56409975 tgttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctccc 56410030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 84851 - 84928
Alignment:
Q  112 tggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||  | ||| |||||||||||||||||||| ||||||||||||||| ||||| | || ||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaat 84928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 30000142 - 30000220
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||| | ||||||| ||||||| ||||||||||||||| |||| | ||||||| ||| |||||| ||||    
T  30000142 ttggcttgggatccgggagtatgcacctcctcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaat 30000220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 16457836 - 16457912
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||| |  | ||| |||||||||||||||||||| |||| |||||||||| ||||| |||| ||||||||    
T  16457836 ttggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttgcgtgggcta 16457912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18974007 - 18974059
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtggg 184  Q
    |||||||||||||||| ||||||||||||||||| | ||||| ||||||||||    
T  18974007 tgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtggg 18974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 16773854 - 16773911
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |||||||||||||||||||| | ||||||| |||  ||||||||||    
T  16773854 tgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaat 16773911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 17155869 - 17155926
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||| |||||||   | ||||| |||||||||||||||    
T  17155869 tgctcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaat 17155926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 24907532 - 24907593
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||| |||||||||||||| |||  ||||||| |||  ||||||||||    
T  24907532 agtatgctcctcctcaagttctcaggttcgattatccttgatgccaatttaggtgggctaat 24907593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 37258413 - 37258364
Alignment:
Q  114 gcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||| || ||| |||||||||||||||| |||||||||||||||    
T  37258413 gcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctc 37258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 3315263 - 3315295
Alignment:
Q  133 gctcctcctcaaggtctcaggttcgattctccc 165  Q
    |||||||||||||||||||||||||||||||||    
T  3315263 gctcctcctcaaggtctcaggttcgattctccc 3315295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 14285208 - 14285256
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||||||||||||||||||||| | | ||||| ||||||    
T  14285208 tgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 14285256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 35705042 - 35705090
Alignment:
Q  141 tcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||||||||||||||| || || |||| ||||||||||    
T  35705042 tcaaggtctcaggttcgattctccccggtgtcaatttgggtgggctaat 35705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 25627104 - 25627135
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  25627104 tgctcctcctcaaggtctcaggttcgattctc 25627135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 43442243 - 43442274
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  43442243 tgctcctcctcaaggtctcaggttcgattctc 43442274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 29692436 - 29692358
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||| ||||||||  | ||| ||||||||||||| ||||||||||  |||||| ||||||||| |||| |||| |||||    
T  29692436 ttggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctccgatgccaatttgggtggactaat 29692358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 24895078 - 24895115
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  24895078 agtatgctcctcctcaagctctcaggttcgattttccc 24895115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 25979219 - 25979248
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||    
T  25979219 ctcctcctcaaggtctcaggttcgattctc 25979248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 34984853 - 34984901
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||||||| ||||||||||||| | | ||||| ||||||    
T  34984853 tgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgag 34984901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 14780553 - 14780610
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||  ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  14780553 tgctccttttcaaggtctcaggttcgatcctccccgatgccaatttgagtgggctaat 14780610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 37480122 - 37480179
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||    
T  37480122 tgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaat 37480179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 42327445 - 42327367
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||||||||||||||||||||||||||||  || ||||| |||| ||||||||||    
T  42327445 ttggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaat 42327367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 19244156 - 19244213
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||| |||||||||||||||||||||| | | ||||| |||||||||||||||    
T  19244156 tgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtgggctaat 19244213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 23052552 - 23052495
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||| |||||||||||||||||||||||||||||   |||||||||| ||||||||||    
T  23052552 tgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaat 23052495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 26482117 - 26482196
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||| | || ||| |||||||| |||||||||||||||||||||||| |  ||||| ||| |||||||||||    
T  26482117 tgttggcttgggacctaggagtgtgctcctc-tcaaggtctcaggttcgattctcctcagtgccaatttcagtgggctaat 26482196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 41908667 - 41908612
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||||| |||||||| |||||| ||||| |||| ||||||||    
T  41908667 tgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggcta 41908612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 29503318 - 29503351
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||||||||||||||||||||||||    
T  29503318 tgctcctcctcaaggtctcaggttcgattctccc 29503351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 4262352 - 4262300
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| ||||||||||||||||||||||||||||||||    
T  4262352 ttggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctc 4262300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 13803542 - 13803590
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||||||||||||||||||||||| || | ||||||| ||||||    
T  13803542 tgctcctcctcaaggtctcaggttcgattatctctgatgccaatttgag 13803590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 20217862 - 20217918
Alignment:
Q  131 atgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||||||||||| |||||||||||| ||   ||||| |||||||||||||    
T  20217862 atgctcctcctcaaggtcttaggttcgattcttccatgtgccaatttgagtgggcta 20217918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 6099569 - 6099507
Alignment:
Q  110 gttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    |||||||||||| |  | ||| |||||||| ||||||||||||||||||||||||||| |||||    
T  6099569 gttggcttgggaccttggagtgtgctcctc-tcaaggtctcaggttcgattctccccgctgcca 6099507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 40416423 - 40416388
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||| |||||||||||||||||||||    
T  40416423 agtatgctcctccttaaggtctcaggttcgattctc 40416388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 12086179 - 12086129
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||||||||| |  ||||| ||||||||||||||||||| ||||||||||    
T  12086179 ttggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattc 12086129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 30359678 - 30359755
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||||| |  | ||| ||||||||||||||||||||  |||||||||||||  ||||| |||| ||||||||    
T  30359678 tgttggcttgggaccttggagtgtgctcctcctcaaggtctca-tttcgattctccccagtgccaatttgggtgggcta 30359755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 39715039 - 39715073
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    ||||||||||| |||||||||||||||||||||||    
T  39715039 tgctcctcctcgaggtctcaggttcgattctcccc 39715073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 42602580 - 42602658
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||| |||||||||| ||||| ||||||| ||| ||||| |||| ||||||||||    
T  42602580 ttggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaat 42602658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 11251128 - 11251165
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  11251128 gaagtgtgctcctcctcaaggtctcaggtttgattctc 11251165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 12517806 - 12517749
Alignment:
Q  108 ttgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    |||||||||||||| |  | ||| |||||||||||||||||||| ||| |||||||||    
T  12517806 ttgttggcttgggaccttggagtttgctcctcctcaaggtctcatgtttgattctccc 12517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 16525232 - 16525265
Alignment:
Q  140 ctcaaggtctcaggttcgattctccccgatgcca 173  Q
    |||||||||||||||||||||||||||| |||||    
T  16525232 ctcaaggtctcaggttcgattctccccggtgcca 16525265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 19016078 - 19016135
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |||||||| ||| ||||||||||| ||||| ||| ||| |||||||    
T  19016078 tgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaat 19016135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 21195705 - 21195676
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||||||||||||||||||||||||||||    
T  21195705 tgctcctcctcaaggtctcaggttcgattc 21195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 25637198 - 25637255
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||| ||| |||||||||||||| ||||| ||||||||| |||  ||||||||||    
T  25637198 tgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaat 25637255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 30808678 - 30808645
Alignment:
Q  130 tatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||| ||||||||||    
T  30808678 tatgctcctcctcaaggtctcagtttcgattctc 30808645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 40791519 - 40791482
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgat 169  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  40791519 tgctccttctcaaggtctcaagttcgattctccccgat 40791482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 42860395 - 42860452
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |||||||| ||||||||| |  || ||| |||||||||||||||||    
T  42860395 tgctcctcctcgaggtctcaagttcgattcccgtcggtgctagtttgagtgggctaat 42860452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 21213795 - 21213871
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||| |  | ||| || |||||||  |||||||||||||||||||||||| ||||| |||  ||||||||    
T  21213795 ttggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggcta 21213871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 19716221 - 19716301
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||| |  | ||| ||||||||||||||||||| |||||||||||||||| || || |||| ||||||||||    
T  19716221 tgttggcttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaat 19716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 51903928 - 51903850
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||  | ||| |||||||||||  ||||||||||||||||||| ||| || || |||||||||||||||    
T  51903928 ttggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaat 51903850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 54990749 - 54990806
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||||||||||||||||||||| ||||| || |||  ||||||||||    
T  54990749 tgctcctcctcaaggtctcaggttcgattctcctcgatggcaatttaggtgggctaat 54990806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 47237021 - 47236946
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggct 186  Q
    |||| |||||| || | ||| |||||||| ||||||||||| ||||||||||||||| ||||| |||| |||||||    
T  47237021 ttggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaatttgggtgggct 47236946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 4844557 - 4844483
Alignment:
Q  115 cttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||  | ||| ||||||||||| |||||||||| ||||||||| ||| ||||| |||| ||||||||||    
T  4844557 cttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaat 4844483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 4870253 - 4870179
Alignment:
Q  115 cttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||  | ||| ||||||||||| |||||||||| ||||||||| ||| ||||| |||| ||||||||||    
T  4870253 cttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaat 4870179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 8796126 - 8796068
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggct 186  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| | |||||| |||||    
T  8796126 agtatgctcctcctcaaggtctcaagttcgattctctctgatgctaatttgagcgggct 8796068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 10445189 - 10445111
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||||||| |||||||||||||||||||| | | ||| | |||||||||||||||    
T  10445189 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaat 10445111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 10499159 - 10499081
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||  | ||| ||||| ||||  |||||||||||||||||||| |||||| || |||| ||||||||||    
T  10499159 ttggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggctaat 10499081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 30311334 - 30311384
Alignment:
Q  113 ggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||  | ||| ||||||||||||||||||||||||||||||||    
T  30311334 ggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 30311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 47454667 - 47454605
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    |||||||| ||||  | ||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  47454667 ttggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgcca 47454605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 39976460 - 39976403
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||| |||||||||||| ||||||| |||| |||| ||||||||||||| |||||    
T  39976460 tgctccttctcaaggtctcaagttcgatcctcctcgataccagtttgagtggactaat 39976403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 46518654 - 46518723
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||  | ||| |||||||||||||||| ||||||| ||||||| | ||||||| ||||||    
T  46518654 ttggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgag 46518723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 31587733 - 31587781
Alignment:
Q  130 tatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttg 178  Q
    |||||||||||| ||||||| |||||||||||||| |||||||| ||||    
T  31587733 tatgctcctccttaaggtctaaggttcgattctccgcgatgccaatttg 31587781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 14186694 - 14186725
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  14186694 tgctcctcctcaaggtctcaggttcgattctc 14186725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 30510248 - 30510197
Alignment:
Q  112 tggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||| | || ||||||||||| ||| ||||||||||||||||||||    
T  30510248 tggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctc 30510197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 37788494 - 37788463
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  37788494 tgctcctcctcaaggtctcaggttcgattctc 37788463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 13174987 - 13174949
Alignment:
Q  135 tcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  13174987 tcctcctcaaggtccgaggttcgattctccccgatgcca 13174949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 14339636 - 14339690
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||   | ||| ||||||||||||| ||||||||||||||||||||    
T  14339636 ttggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccc 14339690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 17108927 - 17108889
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatg 170  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  17108927 tgctcctcctcaaggtctcaggtttgattctccctgatg 17108889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 28703451 - 28703385
Alignment:
Q  114 gcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||||  | ||| |||||||| ||||||||||||||||||||||| | | ||||| ||||||    
T  28703451 gcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgag 28703385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 31520655 - 31520577
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||  | ||| ||||||||||| |||||| ||||| ||||||| ||  || || |||||||||||||||    
T  31520655 ttggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggctaat 31520577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 39253727 - 39253785
Alignment:
Q  115 cttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    |||||||||  | ||| |||||||| ||||||||||||||||||||||| | |||||||    
T  39253727 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatgcca 39253785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 173
Target Start/End: Original strand, 40268546 - 40268576
Alignment:
Q  143 aaggtctcaggttcgattctccccgatgcca 173  Q
    |||||||||||||||||||||||||||||||    
T  40268546 aaggtctcaggttcgattctccccgatgcca 40268576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 44069782 - 44069860
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||| ||||  | ||| |||||||||||||||||||||||| ||||||  ||| ||||| |||  ||||||||    
T  44069782 tgttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggcta 44069860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 11612346 - 11612387
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    |||||||||| ||||||||||||||||| ||||||| |||||    
T  11612346 tgctcctccttaaggtctcaggttcgatgctccccggtgcca 11612387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 16900732 - 16900675
Alignment:
Q  110 gttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccg 167  Q
    |||||||||||| |  | ||| |||||||| ||||||||||| |||||||||||||||    
T  16900732 gttggcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattctccccg 16900675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 18319182 - 18319137
Alignment:
Q  141 tcaaggtctcaggttcgattctccccgatgccagtttgagtgggct 186  Q
    ||||||||||||||||||||||||||| |  || ||||||||||||    
T  18319182 tcaaggtctcaggttcgattctccccggtatcaatttgagtgggct 18319137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 20501743 - 20501799
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||| ||||||||||||||||||||| ||  ||||| |||||| ||||||||    
T  20501743 tgctcctccttaaggtctcaggttcgattctctccagtgccaatttgag-gggctaat 20501799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 30232377 - 30232434
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||| |||||||||||| |||||| ||| ||||| ||||  |||||||||    
T  30232377 tgctcctcctcatggtctcaggttccattctctccggtgccaatttggttgggctaat 30232434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 40063645 - 40063714
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    |||||||||||||    |||||||||||||| ||||||||| ||||||||||| ||  ||||| ||||||    
T  40063645 ttggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttgag 40063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 44743904 - 44743827
Alignment:
Q  112 tggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||  | ||| ||||||||||| ||||||||||||||||| || ||  ||||| |||| ||||| ||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaat 44743827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 4222167 - 4222219
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||  | ||| ||||||||||||| |||| |||||||||||||    
T  4222167 ttggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctc 4222219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 160
Target Start/End: Complemental strand, 15048090 - 15048062
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgatt 160  Q
    |||||||||||||||||||||||||||||    
T  15048090 tgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 17035033 - 17035065
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcc 164  Q
    ||||| |||||||||||||||||||||||||||    
T  17035033 tgctcatcctcaaggtctcaggttcgattctcc 17035065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 26871556 - 26871476
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||| |  | ||| | ||||||||||| |||| ||||| |||||| ||| |||||| |||| ||||||||||    
T  26871556 tgttggcttgggaccttggagttttctcctcctcaaagtctgaggtttgattctacccaatgccaatttgggtgggctaat 26871476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 45308935 - 45308903
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgatt 160  Q
    ||||||||||||||| |||||||||||||||||    
T  45308935 agtatgctcctcctcgaggtctcaggttcgatt 45308903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 53412992 - 53413040
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||||||||||||||||||| |||||| | | ||||| ||||||    
T  53412992 tgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgag 53413040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 13096 - 13021
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggct 186  Q
    |||||||| ||||  | ||| |||||||||||||||||||||||||||||||| |||||| || |||| |||||||    
T  13096 ttggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggtgggct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 24334058 - 24333999
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||| |||| ||||||||    
T  24334058 agtatgctcctcctcaaggtctcaggttcaattctcaccggtgccaatttgggtgggcta 24333999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 34444850 - 34444907
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||| |||||||||||||||||||||||| |  || |||||||||||||||||    
T  34444850 tgctcctccccaaggtctcaggttcgattctccctggagctagtttgagtgggctaat 34444907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 10338224 - 10338169
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    ||||||||||| | || ||| |||||||||||||||||||||||||||||| ||||    
T  10338224 ttggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattcccccc 10338169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 6385909 - 6385966
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||| ||||||||||||||||||||| ||| ||| | |||| ||||||||||    
T  6385909 tgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaat 6385966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 14557986 - 14558042
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||| |  ||||| |||||||||||  |||||||||||||||||||||    
T  14557986 tgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctccc 14558042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 33549130 - 33549192
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    ||||||||||| |  | ||| ||||||||||| |||||||||||||||||||| | |||||||    
T  33549130 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgcca 33549192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 10650068 - 10650011
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||| ||||||||||||||| ||||||| ||| |||||| ||||  ||||||||    
T  10650068 tgctcctcttcaaggtctcaggtttgattctctccggtgccagcttgaacgggctaat 10650011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 23242035 - 23242088
Alignment:
Q  134 ctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||||||| ||||| || ||||||||| ||||| |||| ||||||||    
T  23242035 ctcctcctcaaggtcacaggtccggttctccccggtgccaatttgggtgggcta 23242088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 1906538 - 1906570
Alignment:
Q  130 tatgctcctcctcaaggtctcaggttcgattct 162  Q
    |||||||||||||||||||||| ||||||||||    
T  1906538 tatgctcctcctcaaggtctcaagttcgattct 1906570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 9626066 - 9626110
Alignment:
Q  119 ggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||| || ||||||||||||||| |||||||| |||||||||||    
T  9626066 ggatctaggagtatgctcctcctcgaggtctcatgttcgattctc 9626110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 11306207 - 11306155
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||| || ||||||||||||||||||||||| | | ||||| ||||||    
T  11306207 agtatgctcatcttcaaggtctcaggttcgattctctctggtgccaatttgag 11306155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 17328297 - 17328237
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaa 188  Q
    |||||||||||| ||||||| ||||||||||||||| | ||||  | |||| |||||||||    
T  17328297 agtatgctcctcttcaaggtttcaggttcgattctctctgatgttaatttgggtgggctaa 17328237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 24617105 - 24617156
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||| ||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  24617105 ttggtttgagatctagaagtatgctcctcctc-aggtctaaggttcgattctc 24617156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27776306 - 27776250
Alignment:
Q  127 aagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgg 183  Q
    |||| ||||||||||||| || || |||||||||| ||| |||| ||||||||||||    
T  27776306 aagtgtgctcctcctcaaagtttctggttcgattcaccctgatgtcagtttgagtgg 27776250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 28841440 - 28841492
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||| || | || ||| |||||||||||||||||||| |||||||||||    
T  28841440 ttggcttgagaccaaggagtgtgctcctcctcaaggtctcaagttcgattctc 28841492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 15827 - 15749
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||   | |||||||||||||||||||||||| ||| |||||||| || ||||| |||| ||||||||||    
T  15827 ttggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggtgggctaat 15749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 81599 - 81545
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  81599 gaagtgtgctcctcctcaaggtctcagattcgattctccctgatgccaatttgag 81545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 968388 - 968466
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||||||| |||||||||||||||||||| ||||||||| |||  ||||||||||    
T  968388 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaat 968466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 2203518 - 2203596
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| |||||||||||||||||||||| || |||||||||| ||||| |||| ||||||||||    
T  2203518 ttggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaat 2203596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 28783107 - 28783164
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    |||||||||||||||||||| |||||||||||| || ||||| |||| ||||||||||    
T  28783107 tgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaat 28783164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 33017255 - 33017309
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||| |||||||||||||||||||||||||||||||| | | ||||| ||||||    
T  33017255 gaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 33017309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 19703516 - 19703483
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccc 165  Q
    ||||||||||||||||||||||||||||||||||    
T  19703516 tgctcctcctcaaggtctcaggttcgattctccc 19703483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 6530831 - 6530894
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    ||||||||||||| | || ||| |||||||| |||| |||||||||||||||||||||| |||||    
T  6530831 tgttggcttgggacctaggagtgtgctcctc-tcaatgtctcaggttcgattctccccggtgcca 6530894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 6536546 - 6536598
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| | || ||| ||||||||||||||||||||||||| ||||||    
T  6536546 ttggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctc 6536598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 8059682 - 8059734
Alignment:
Q  135 tcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||||||| |||||||| |||| || |||||||| ||||    
T  8059682 tcctcctcaaggtctcaggttccattctccctgatgtcaatttgagtgagcta 8059734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 35690114 - 35690062
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||  |  || ||||||||||||||||||||||||||||||||    
T  35690114 ttggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctc 35690062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 3524453 - 3524394
Alignment:
Q  109 tgttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccga 168  Q
    ||||||||||||| |  | ||| |||||||||||||||||| |||||| |||||||||||    
T  3524453 tgttggcttgggaccttggagtgtgctcctcctcaaggtcttaggttcaattctccccga 3524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 11793550 - 11793495
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||| ||||| |||||| |||| ||||| |||| ||||||||    
T  11793550 tgctcctcctcaaggtcttaggtttgattcttcccggtgccaatttgggtgggcta 11793495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 22193393 - 22193338
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    |||||||||||||||||| ||||||||||||| |||| | || ||| |||||||||    
T  22193393 tgctcctcctcaaggtcttaggttcgattctctccgaaggcaatttaagtgggcta 22193338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 28787530 - 28787491
Alignment:
Q  127 aagtatgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  28787530 aagtgtgctcctcctcaaggtctcaggtttgattctcccc 28787491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 33727908 - 33727873
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||| ||||||||||||||||||||||||||||||    
T  33727908 gaagtgtgctcctcctcaaggtctcaggttcgattc 33727873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 167
Target Start/End: Original strand, 36205242 - 36205277
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctccccg 167  Q
    |||||||||||||||||||| |||||||||||||||    
T  36205242 tgctcctcctcaaggtctcatgttcgattctccccg 36205277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 29858099 - 29858021
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||||||| |||||||||||||||||| || || ||||| |||  ||||||||||    
T  29858099 ttggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggctaat 29858021  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 8794380 - 8794343
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  8794380 gaagtgtgctcctcctcagggtctcaggttcgattctc 8794343  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 11819823 - 11819852
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||||||||||||||||||||||||||||    
T  11819823 tgctcctcctcaaggtctcaggttcgattc 11819852  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 16852366 - 16852419
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctcc 164  Q
    ||||||||||| |  | ||| ||||||||||| |||||||||||||||||||||    
T  16852366 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctcc 16852419  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 27750777 - 27750806
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattc 161  Q
    ||||||||||||||||||||||||||||||    
T  27750777 tgctcctcctcaaggtctcaggttcgattc 27750806  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 3624606 - 3624658
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||| |  | ||| |||||||| |||||||||||||||||||||||    
T  3624606 ttggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctc 3624658  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 11928766 - 11928730
Alignment:
Q  126 gaagtatgctcctcctcaaggtctcaggttcgattct 162  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  11928766 gaagtgtgctcctcctcgaggtctcaggttcgattct 11928730  T

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Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 18540350 - 18540402
Alignment:
Q  137 ctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||||||||||||||| | | ||||| |||||| ||| ||||    
T  18540350 ctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaat 18540402  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 18546392 - 18546360
Alignment:
Q  131 atgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||| ||||||||||||||||||||    
T  18546392 atgctcctcctcgaggtctcaggttcgattctc 18546360  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 43594344 - 43594316
Alignment:
Q  135 tcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||||||||||||||||||    
T  43594344 tcctcctcaaggtctcaggttcgattctc 43594316  T

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Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 19995 - 19960
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||||||    
T  19995 agtatgctcctcctcaaggtctcaggttcgattctc 19960  T

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Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 2499 - 2465
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctcccc 166  Q
    |||||||||||||||||||||||||||||||||||    
T  2499 tgctcctcctcaaggtctcaggttcgattctcccc 2465  T

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Target: scaffold0258 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 15373 - 15295
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||| |  | ||| ||||||||||| |||||||||||||||||||| | ||||||| |||  ||||||||||    
T  15373 ttggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaat 15295  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 189
Target Start/End: Complemental strand, 41666 - 41605
Alignment:
Q  128 agtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgagtgggctaat 189  Q
    ||||||||||||||| ||||||||||||| |||||| | |||| || |||| ||||||||||    
T  41666 agtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgggctaat 41605  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 35439 - 35370
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctccccgatgccagtttgag 180  Q
    ||||||||| ||| || |||||||||||||||||||||| | |||||||| || | ||||||| ||||||    
T  35439 ttggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctgatgccaatttgag 35370  T

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Target: scaffold0299 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 11554 - 11606
Alignment:
Q  111 ttggcttgggatccagaagtatgctcctcctcaaggtctcaggttcgattctc 163  Q
    |||||||||||||  | ||| ||||||||||| ||||||||||||||||||||    
T  11554 ttggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 11606  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 163
Target Start/End: Complemental strand, 2740 - 2709
Alignment:
Q  132 tgctcctcctcaaggtctcaggttcgattctc 163  Q
    ||||||||||||||||||||||||||||||||    
T  2740 tgctcctcctcaaggtctcaggttcgattctc 2709  T

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Target: scaffold0189 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 17745 - 17698
Alignment:
Q  140 ctcaaggtctcaggttcgattctccccgatgccagtttgagtgggcta 187  Q
    ||||||||||||||||||||||||| ||| |||| ||| |||||||||    
T  17745 ctcaaggtctcaggttcgattctcctcgaggccaatttcagtgggcta 17698  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 132001 - 132039
Alignment:
Q  135 tcctcctcaaggtctcaggttcgattctccccgatgcca 173  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  132001 tcctcctcaaggtccgaggttcgattctccccgatgcca 132039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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