View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12044_high_10 (Length: 250)
Name: NF12044_high_10
Description: NF12044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12044_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 18770582 - 18770824
Alignment:
| Q |
4 |
gtgcatagttttcaagagtttaattttgatacacttttggtgtaagaaattctacacggtatatacaacacaactaaccatgtgtttaagtcaaatttta |
103 |
Q |
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| T |
18770582 |
gtgcatagttttcaagagtttaattttgatacacttttggtgtaagaaattctacacggtatatacaacacaactaaccatgtgtttaagtcaaatttta |
18770681 |
T |
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| Q |
104 |
atgatcacatgaccttcattata---ttctatgacatcacatgactgttatagtttattgacagtgtaaaaatattttatatcaaca--atatatgaatt |
198 |
Q |
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| T |
18770682 |
atgatcacatgaccttcattatatttttctatgacatcacatgactgttatagtttattgacagtgtaaaaagattttatatcaacaatatatatgaatt |
18770781 |
T |
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| Q |
199 |
acttaaactaaatttttaaagccttcaaattactccatatcat |
241 |
Q |
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| T |
18770782 |
atttaaactaaatttttaaagccttcaaattactccatatcat |
18770824 |
T |
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