View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12044_high_11 (Length: 245)
Name: NF12044_high_11
Description: NF12044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12044_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 45465785 - 45466014
Alignment:
| Q |
1 |
catcaattctagtttctgatcctaacggtattttcttccaagcaatttcaaatgttgctggtgaagaatcagcacgtgcggttgaacgtgttttgaaaca |
100 |
Q |
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| T |
45465785 |
catcaattctagtttctgatcctaacggtattttcttccaagcaatttcaaatgttgctggtgaagaatcagcacgtgccgttgaacgtgttttgaaaca |
45465884 |
T |
|
| Q |
101 |
agcattaaagaaacttccatctcaatctcctccaccagatgaagtacctggtagcaccgcgcttatcaaagcaattcgtagagcacaagctgctcagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
45465885 |
agcattaaagaaacttccatctcaatctcctccaccagatgaagtacctggtagcaccgcgcttatcaaagcgattcgtagagcacaagctgctcagaaa |
45465984 |
T |
|
| Q |
201 |
tcacgtggtgatactcatttagctgttgat |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
45465985 |
tcacgtggtgatactcatttagctgttgat |
45466014 |
T |
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