View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12045_high_17 (Length: 250)
Name: NF12045_high_17
Description: NF12045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12045_high_17 |
 | |
|
| [»] scaffold0442 (1 HSPs) |
| | |
|
| [»] scaffold0167 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 13076713 - 13076949
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13076713 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatagaaacaatattt |
13076812 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaagatctgtgttaag |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13076813 |
agtacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaaaatctgtgttaag |
13076912 |
T |
|
| Q |
201 |
aggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13076913 |
agggaattttttggaagttgatatgaatgtgctctct |
13076949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 32060038 - 32059801
Alignment:
| Q |
3 |
caatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatatttaa |
102 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
32060038 |
caatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatataaacaatatttag |
32059939 |
T |
|
| Q |
103 |
tacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcc---tagtggtttgatgaaaagttaaagttgaataaagatctgtgttaa |
199 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
32059938 |
tacactttcttgtatcacccgcaagtttgggatagtaaattgtcatgaatccttttagtggtttgatgaaaagttaaagttgaataaaaatttgtgttaa |
32059839 |
T |
|
| Q |
200 |
gaggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
32059838 |
gaggggattttttggaagttgatatgaatgtgctctct |
32059801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 51423363 - 51423143
Alignment:
| Q |
17 |
ttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatatttaatacactttcttgta |
116 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
51423363 |
ttcaccaatttaattttaaagtgatgtgaataggaaataatgtttctgagtagataatgggaggaaaagatagaaacagtatttagtaccctttcttgta |
51423264 |
T |
|
| Q |
117 |
ccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaagatctgtgttaagaggagattttttggaa |
216 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
51423263 |
ccacccccaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaaaatctgtgttaagaggggattttttggaa |
51423164 |
T |
|
| Q |
217 |
gttgatatgaatgtgctctct |
237 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
51423163 |
gttgatatgaatgtgctctct |
51423143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 11685048 - 11684814
Alignment:
| Q |
3 |
caatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatatttaa |
102 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
11685048 |
caatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgagaggaaaagatagaaacaatatttag |
11684949 |
T |
|
| Q |
103 |
tacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaagatctgtgttaagag |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| | |
|
|
| T |
11684948 |
tacactttcttgtaccacccgcaagtttgggatagtatattgccatgaatctcattggtttgatgaaaagttaaagttgaataaaagtctgtgttaaatg |
11684849 |
T |
|
| Q |
203 |
gagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
| |||||||||||||||||| |||||| ||||||| |
|
|
| T |
11684848 |
gggattttttggaagttgatgtgaatgagctctct |
11684814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0442 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0442
Description:
Target: scaffold0442; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 13747 - 13982
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13747 |
agcaatctctttccatttcaccaatttaatttttaagtgatgtgaatagaaaataatgtttttgagtagataatgggaggaaaagatagaaacaatattt |
13846 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaagatctgtgttaag |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
13847 |
agtacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaaaatatgtgttaag |
13946 |
T |
|
| Q |
201 |
aggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
| | || |||||||||||||||||||||||||||||| |
|
|
| T |
13947 |
aaggga-tttttggaagttgatatgaatgtgctctct |
13982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0167 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0167
Description:
Target: scaffold0167; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 16163 - 16402
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16163 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatagaaacaatattt |
16262 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcc---tagtggtttgatgaaaagttaaagttgaataaagatctgtgtt |
197 |
Q |
| |
|
| |||||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||| |
|
|
| T |
16263 |
agtacactttcttgtatcacctgcaactttgggatagtaaattgccatgaatccttttagtggtttgatgaaaagttaaagttgaacaaaaatatgtgtt |
16362 |
T |
|
| Q |
198 |
aagaggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16363 |
aagaggagattttttggaagttgatatgaatgtgctctct |
16402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0167; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20533 - 20648
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
20533 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatagaaacaatattt |
20632 |
T |
|
| Q |
101 |
aatacactttcttgta |
116 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
20633 |
agtacactttcttgta |
20648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 8210988 - 8210749
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8210988 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatagaaacaatattt |
8210889 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgc--aagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaagatctgtgtta |
198 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
8210888 |
tgtacactttcttgtaccacccgcaaaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaatttaaagttgaataaaaatttgtgtta |
8210789 |
T |
|
| Q |
199 |
agaggaga-ttttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
8210788 |
agaggggatttttttggaagttgatatgaatgtgctctct |
8210749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 9289201 - 9288965
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9289201 |
agcaatctctttccatttcaccaatttaattttgaagtgatgcgaataggaaataatgtttttgaggagataatgggaggaaaagatagaaacaatattt |
9289102 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaagatctgtgttaag |
200 |
Q |
| |
|
| ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
9289101 |
agtacaccttcttgtaccacttgcaagtttgggacagtaaattgccatgaatcctagtggtttgatgaaaagttaaagttgaataaaaatctttgttaag |
9289002 |
T |
|
| Q |
201 |
aggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| |
|
|
| T |
9289001 |
agaggattttttggaagttgatatgaatgtgctctct |
9288965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 19848671 - 19848432
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
19848671 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgttattgagtagataatgggaggaaaagatagaaacaatattt |
19848572 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcc---tagtggtttgatgaaaagttaaagttgaataaagatctgtgtt |
197 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
19848571 |
agtacactttcttgtatcacccgcaagtttgggatagtaaattgccatgaatccttttagtggtttgataaaaagttaaagttgaataaaaatttgtgtt |
19848472 |
T |
|
| Q |
198 |
aagaggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
|||| | || |||||||||||||||||||||||||||||| |
|
|
| T |
19848471 |
aagaagggaatttttggaagttgatatgaatgtgctctct |
19848432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 14463788 - 14464017
Alignment:
| Q |
5 |
atctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatatttaata |
104 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
14463788 |
atctcttttcatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatagaaacaatatttagta |
14463887 |
T |
|
| Q |
105 |
cactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcc---tagtggtttgatgaaaagttaaagttgaataaagatctgtgttaaga |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| || |
|
|
| T |
14463888 |
cactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatccttttagtggtttgatgaaaaattaaagttgaataaaaatct------cga |
14463981 |
T |
|
| Q |
202 |
ggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
14463982 |
ggagattttttagaagttgttatgaatgtgctctct |
14464017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 19847285 - 19847050
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| | ||| ||||||| |
|
|
| T |
19847285 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagatattgggaggaaaagacaaaaataatattt |
19847186 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaagtttgggatagtaaattgccatgaatcc---tagtggtttgatgaaaagttaaagttgaataaagatctgtgtt |
197 |
Q |
| |
|
| |||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
19847185 |
agtacactttcttgtatcacccgcaagtttgagatggtaaattgccatgaatccttttagtggtttgatgaaaagataaagttgaataaaaatttgtgtt |
19847086 |
T |
|
| Q |
198 |
aagaggagattttttggaagttgatatgaatgtgct |
233 |
Q |
| |
|
|||||| ||||||||||||| || ||| |||||||| |
|
|
| T |
19847085 |
aagaggggattttttggaagatggtattaatgtgct |
19847050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 19848133 - 19847892
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| | ||| ||||||| |
|
|
| T |
19848133 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgtttttgagtagatattgggaggaaaagacaaaaataatattt |
19848034 |
T |
|
| Q |
101 |
aatacactttcttgtaccacccgcaag--tttgggatagtaaattgccatgaatcc---tagtggtttgatgaaaagttaaagttgaataaagatctgtg |
195 |
Q |
| |
|
| |||||||||||||| |||| ||||| ||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| || |||| |
|
|
| T |
19848033 |
agtacactttcttgtatcacctgcaagtttttaagatagtaaattgtcatgaatccttttagtggtttgatgaaaaattaaagttgaataaaaatttgtg |
19847934 |
T |
|
| Q |
196 |
ttaagaggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19847933 |
ttaagaggggattttttggaagttgatatgaatgtgctctct |
19847892 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 19847706 - 19847585
Alignment:
| Q |
119 |
acccgcaagtttgggatagtaaattgccatgaatcct---agtggtttgatgaaaagttaaagttgaataaagatctgtgttaagaggagattttttgga |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
19847706 |
acccgcaagtttgggatagtaaattgccatgaatccttttaatggtttgataaaaagttaaagttgaataaaaatctgtattaagaggggattttttgga |
19847607 |
T |
|
| Q |
216 |
agttgatatgaatgtgctctct |
237 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
19847606 |
agttgatatgaatgcgctctct |
19847585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7055959 - 7056019
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgttt |
61 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7055959 |
agcaatctctttccatttcaccaatttaattttgaagtgatgtgaataggaaataatgttt |
7056019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38979169 - 38979066
Alignment:
| Q |
1 |
agcaatctctttccatttcaccaatttaagtttgaagtgatgtgaataggaaataatgtttttgagttgataatgggaggaaaagatagaaacaatattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38979169 |
agcaatctctttccatttcaccaattt-----tgaagtgatgtgaataggaaataatgtttttgagtagataatgggaggaaaagatagaaacaatattt |
38979075 |
T |
|
| Q |
101 |
aatacactt |
109 |
Q |
| |
|
| ||||||| |
|
|
| T |
38979074 |
agtacactt |
38979066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 38974744 - 38974665
Alignment:
| Q |
158 |
tggtttgatgaaaagttaaagttgaataaagatctgtgttaagaggagattttttggaagttgatatgaatgtgctctct |
237 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
38974744 |
tggtttgatgaaaagttaaagttgaataaaaatctgtgttaagaggagatttttcggaagttgatatgaatgtgctctct |
38974665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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