View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12045_low_12 (Length: 405)
Name: NF12045_low_12
Description: NF12045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12045_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 19 - 368
Target Start/End: Complemental strand, 46062391 - 46062042
Alignment:
| Q |
19 |
acgattttgtatttttcattaatgcgagatgtggcactaaccgtgatgaacagggtcaacttacttctaaagttagtttaaaatatatgtttagcatcat |
118 |
Q |
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| T |
46062391 |
acgattttgtatttttcattaatgcgagatgtggcactaaccgtgatgaacagggtcaacttacttctaaagttagtttaaaatatatgtttagcatcat |
46062292 |
T |
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| Q |
119 |
aagagactagaataatatacttgaatcttgatagctgagtgaaccaattattcatgttttaggctggtatagtaccatctctagatggcttggtgaagga |
218 |
Q |
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| T |
46062291 |
aagagactagaataatatacttgaatcttgatagctgagtgaaccaattattcatgttttaggctggtatagtaccatctctagatggcttggtgaagga |
46062192 |
T |
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| Q |
219 |
gtttgtgagtgccaacgacgatgagaagaagattgtcttttccagacttgtagagaaagttaatacgcttaagggttctactgcaaggtttgaatgatat |
318 |
Q |
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| T |
46062191 |
gtttgtgagtgccaacgacgatgagaagaagattgtcttttccagacttgtagagaaagttaatacgcttaagggttctactgcaaggtttgaatgatat |
46062092 |
T |
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| Q |
319 |
cacatttcttgatttgttctggtttgcttgagttttataatttgaattgg |
368 |
Q |
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| T |
46062091 |
cacatttcttgatttgttctggtttgcttgagttttataatttgaattgg |
46062042 |
T |
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