View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12047_high_8 (Length: 236)

Name: NF12047_high_8
Description: NF12047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12047_high_8
NF12047_high_8
[»] chr6 (40 HSPs)
chr6 (2-212)||(21846995-21847205)
chr6 (109-176)||(31127031-31127098)
chr6 (112-176)||(24399087-24399151)
chr6 (109-176)||(13145503-13145570)
chr6 (114-176)||(23005692-23005755)
chr6 (114-176)||(23782611-23782674)
chr6 (39-85)||(2092191-2092237)
chr6 (39-85)||(9241381-9241427)
chr6 (126-176)||(10704237-10704287)
chr6 (39-85)||(21802456-21802502)
chr6 (39-85)||(33950737-33950783)
chr6 (129-177)||(25596108-25596156)
chr6 (39-85)||(187958-188004)
chr6 (47-85)||(2522852-2522890)
chr6 (39-85)||(6937756-6937802)
chr6 (39-85)||(12025704-12025750)
chr6 (47-85)||(12409599-12409637)
chr6 (39-85)||(14873539-14873585)
chr6 (39-85)||(15499347-15499393)
chr6 (109-171)||(23231575-23231637)
chr6 (39-85)||(34250558-34250604)
chr6 (114-174)||(18171672-18171733)
chr6 (39-76)||(34794037-34794074)
chr6 (41-85)||(32522014-32522058)
chr6 (114-177)||(19626265-19626327)
chr6 (109-176)||(26186111-26186178)
chr6 (39-85)||(3767251-3767297)
chr6 (178-212)||(9517267-9517301)
chr6 (114-176)||(19876235-19876297)
chr6 (39-85)||(22268896-22268942)
chr6 (39-85)||(24620400-24620446)
chr6 (39-85)||(32114259-32114305)
chr6 (39-85)||(34280203-34280249)
chr6 (39-76)||(12767467-12767504)
chr6 (179-212)||(14638103-14638136)
chr6 (179-212)||(22813280-22813313)
chr6 (39-83)||(2655114-2655158)
chr6 (114-178)||(12348564-12348627)
chr6 (114-179)||(17381870-17381936)
chr6 (179-211)||(20005456-20005488)
[»] chr3 (60 HSPs)
chr3 (109-176)||(13699733-13699800)
chr3 (109-176)||(16793980-16794047)
chr3 (109-176)||(21317732-21317799)
chr3 (109-173)||(13654340-13654404)
chr3 (109-176)||(50722144-50722211)
chr3 (109-176)||(50790638-50790705)
chr3 (109-176)||(6252524-6252591)
chr3 (39-85)||(3090270-3090316)
chr3 (39-85)||(3540935-3540981)
chr3 (39-85)||(11345211-11345257)
chr3 (39-85)||(13625427-13625473)
chr3 (39-85)||(18364809-18364855)
chr3 (126-176)||(19705821-19705871)
chr3 (126-176)||(27851963-27852013)
chr3 (115-176)||(11514230-11514291)
chr3 (40-85)||(33114782-33114827)
chr3 (40-85)||(47794504-47794549)
chr3 (109-176)||(6174411-6174478)
chr3 (109-176)||(7477936-7478003)
chr3 (109-176)||(7494701-7494768)
chr3 (42-85)||(32255230-32255273)
chr3 (39-85)||(1363904-1363950)
chr3 (126-176)||(3087930-3087980)
chr3 (39-85)||(4757977-4758023)
chr3 (39-85)||(11056407-11056453)
chr3 (114-176)||(12968785-12968846)
chr3 (39-85)||(16067403-16067449)
chr3 (39-85)||(23309125-23309171)
chr3 (47-85)||(27255473-27255511)
chr3 (39-85)||(27639001-27639047)
chr3 (39-85)||(32736863-32736909)
chr3 (39-85)||(37183602-37183648)
chr3 (39-85)||(53490552-53490598)
chr3 (114-174)||(16882730-16882791)
chr3 (109-158)||(20418609-20418658)
chr3 (114-178)||(14077033-14077097)
chr3 (109-176)||(15648134-15648201)
chr3 (39-82)||(22524645-22524688)
chr3 (47-85)||(1262584-1262622)
chr3 (114-176)||(4242855-4242917)
chr3 (114-176)||(6713507-6713568)
chr3 (114-176)||(10852205-10852267)
chr3 (179-213)||(12373486-12373520)
chr3 (114-176)||(12397555-12397616)
chr3 (39-85)||(17764820-17764865)
chr3 (39-85)||(19066140-19066185)
chr3 (114-176)||(19197519-19197580)
chr3 (39-85)||(26057604-26057650)
chr3 (47-85)||(32374258-32374296)
chr3 (39-85)||(40036247-40036293)
chr3 (39-85)||(41587164-41587210)
chr3 (39-85)||(41865165-41865211)
chr3 (39-76)||(7724746-7724783)
chr3 (179-212)||(8319603-8319636)
chr3 (39-84)||(11388579-11388624)
chr3 (179-212)||(16245244-16245277)
chr3 (48-85)||(25259426-25259463)
chr3 (39-76)||(32221947-32221984)
chr3 (40-76)||(1779665-1779701)
chr3 (39-79)||(48841880-48841920)
[»] scaffold0622 (1 HSPs)
scaffold0622 (112-176)||(1511-1575)
[»] scaffold0351 (1 HSPs)
scaffold0351 (109-176)||(8912-8979)
[»] chr8 (40 HSPs)
chr8 (109-176)||(22711009-22711076)
chr8 (109-176)||(23192261-23192328)
chr8 (39-85)||(4257083-4257129)
chr8 (39-85)||(17564846-17564892)
chr8 (39-84)||(30056465-30056510)
chr8 (39-85)||(13421591-13421637)
chr8 (39-85)||(30354379-30354425)
chr8 (39-80)||(32904835-32904876)
chr8 (40-85)||(37837099-37837144)
chr8 (40-85)||(45488326-45488371)
chr8 (41-85)||(24778512-24778556)
chr8 (47-85)||(13439665-13439703)
chr8 (39-85)||(17496439-17496485)
chr8 (39-85)||(22934798-22934844)
chr8 (114-176)||(23352745-23352806)
chr8 (39-85)||(25597963-25598009)
chr8 (39-85)||(29635897-29635943)
chr8 (39-85)||(33972823-33972869)
chr8 (39-85)||(34678774-34678820)
chr8 (39-85)||(39998889-39998935)
chr8 (39-85)||(44746353-44746399)
chr8 (116-176)||(1208343-1208404)
chr8 (115-176)||(12194308-12194369)
chr8 (115-176)||(12438736-12438797)
chr8 (40-85)||(14364301-14364346)
chr8 (128-176)||(17916487-17916536)
chr8 (176-212)||(23892751-23892787)
chr8 (39-85)||(3940069-3940115)
chr8 (47-85)||(6293037-6293075)
chr8 (47-85)||(11759919-11759957)
chr8 (39-85)||(17734764-17734810)
chr8 (39-85)||(24809763-24809809)
chr8 (39-85)||(40299439-40299485)
chr8 (39-85)||(42166199-42166245)
chr8 (40-85)||(8438419-8438464)
chr8 (40-85)||(25482776-25482821)
chr8 (39-76)||(44284211-44284248)
chr8 (41-85)||(14094002-14094046)
chr8 (180-212)||(25181979-25182011)
chr8 (114-177)||(43645220-43645283)
[»] chr5 (46 HSPs)
chr5 (109-176)||(20969619-20969686)
chr5 (40-85)||(8437918-8437963)
chr5 (115-176)||(20237076-20237137)
chr5 (112-176)||(23590163-23590227)
chr5 (109-176)||(39798582-39798649)
chr5 (39-85)||(19409056-19409102)
chr5 (40-85)||(2553748-2553793)
chr5 (40-85)||(20570338-20570383)
chr5 (39-82)||(6029790-6029833)
chr5 (114-176)||(26251508-26251571)
chr5 (39-85)||(4055249-4055295)
chr5 (39-85)||(5138816-5138862)
chr5 (39-85)||(10687765-10687811)
chr5 (39-85)||(13686146-13686192)
chr5 (39-85)||(20540822-20540868)
chr5 (39-85)||(21639538-21639584)
chr5 (39-85)||(37334091-37334137)
chr5 (115-176)||(31588682-31588743)
chr5 (177-213)||(19008095-19008131)
chr5 (114-170)||(19749905-19749961)
chr5 (39-85)||(18338041-18338085)
chr5 (39-82)||(18523904-18523947)
chr5 (177-212)||(24659566-24659601)
chr5 (42-85)||(30783231-30783274)
chr5 (177-212)||(34129117-34129152)
chr5 (42-85)||(38955412-38955455)
chr5 (39-85)||(14594251-14594297)
chr5 (47-85)||(15144930-15144968)
chr5 (39-85)||(20691302-20691348)
chr5 (39-85)||(21687877-21687923)
chr5 (39-85)||(22730911-22730957)
chr5 (130-180)||(27275880-27275930)
chr5 (39-85)||(27979408-27979454)
chr5 (39-85)||(31601396-31601441)
chr5 (39-85)||(36762026-36762072)
chr5 (39-85)||(36762291-36762337)
chr5 (40-85)||(1406087-1406132)
chr5 (109-158)||(13692805-13692854)
chr5 (179-212)||(20549257-20549290)
chr5 (180-213)||(23336095-23336128)
chr5 (40-85)||(32348330-32348375)
chr5 (39-109)||(40956931-40957001)
chr5 (114-177)||(6512102-6512166)
chr5 (40-76)||(31850182-31850218)
chr5 (40-76)||(38497536-38497572)
chr5 (41-85)||(40027107-40027151)
[»] chr4 (49 HSPs)
chr4 (109-176)||(14356777-14356844)
chr4 (109-176)||(21350231-21350298)
chr4 (39-85)||(13772236-13772282)
chr4 (39-85)||(18362549-18362595)
chr4 (39-85)||(36600331-36600377)
chr4 (39-85)||(37424299-37424345)
chr4 (39-85)||(50825137-50825183)
chr4 (39-85)||(55814815-55814861)
chr4 (128-177)||(14867218-14867267)
chr4 (115-176)||(20577665-20577726)
chr4 (37-85)||(20544870-20544918)
chr4 (109-176)||(2652167-2652234)
chr4 (114-177)||(10250264-10250326)
chr4 (47-85)||(755053-755091)
chr4 (39-85)||(796825-796871)
chr4 (47-85)||(4950119-4950157)
chr4 (39-85)||(6232609-6232655)
chr4 (39-85)||(7165583-7165629)
chr4 (114-176)||(19888751-19888813)
chr4 (39-85)||(23265626-23265672)
chr4 (39-85)||(23309321-23309367)
chr4 (39-85)||(39100399-39100445)
chr4 (114-179)||(12417220-12417284)
chr4 (39-76)||(29429560-29429597)
chr4 (40-85)||(47030005-47030050)
chr4 (39-76)||(53102601-53102638)
chr4 (41-85)||(26705212-26705256)
chr4 (39-79)||(35853735-35853775)
chr4 (177-212)||(17025896-17025931)
chr4 (47-85)||(721831-721869)
chr4 (39-85)||(4964074-4964120)
chr4 (114-176)||(11901656-11901717)
chr4 (39-85)||(12250861-12250907)
chr4 (39-85)||(21037475-21037521)
chr4 (39-85)||(26808558-26808604)
chr4 (39-85)||(29979223-29979269)
chr4 (39-85)||(33046737-33046783)
chr4 (39-85)||(37709421-37709467)
chr4 (40-82)||(37734866-37734908)
chr4 (47-85)||(38720466-38720504)
chr4 (39-85)||(50264558-50264604)
chr4 (39-85)||(54092690-54092736)
chr4 (39-85)||(56309591-56309637)
chr4 (115-176)||(17812014-17812074)
chr4 (41-82)||(20544792-20544833)
chr4 (40-85)||(55139862-55139907)
chr4 (40-76)||(10556113-10556149)
chr4 (41-85)||(36650782-36650826)
chr4 (41-85)||(36897951-36897995)
[»] scaffold1050 (1 HSPs)
scaffold1050 (115-176)||(1314-1375)
[»] scaffold0772 (1 HSPs)
scaffold0772 (117-178)||(499-560)
[»] chr7 (49 HSPs)
chr7 (109-177)||(5035738-5035806)
chr7 (39-85)||(16425860-16425906)
chr7 (114-176)||(18361302-18361364)
chr7 (109-176)||(18047575-18047642)
chr7 (39-85)||(8123127-8123173)
chr7 (126-176)||(16307397-16307447)
chr7 (39-85)||(25607118-25607164)
chr7 (39-85)||(27619485-27619531)
chr7 (39-85)||(40401733-40401779)
chr7 (40-85)||(20261433-20261478)
chr7 (40-85)||(31872962-31873007)
chr7 (39-79)||(19434800-19434840)
chr7 (177-212)||(11803548-11803583)
chr7 (39-85)||(25781-25827)
chr7 (39-85)||(317801-317847)
chr7 (39-85)||(2146559-2146605)
chr7 (51-85)||(12679157-12679191)
chr7 (39-85)||(20115403-20115449)
chr7 (39-85)||(22711811-22711857)
chr7 (39-85)||(23226514-23226560)
chr7 (39-85)||(23235667-23235713)
chr7 (39-85)||(23242702-23242748)
chr7 (39-85)||(31221307-31221353)
chr7 (39-85)||(38670187-38670233)
chr7 (39-85)||(38987929-38987975)
chr7 (39-85)||(40344279-40344325)
chr7 (39-85)||(48872188-48872234)
chr7 (39-85)||(48982050-48982096)
chr7 (109-158)||(9063860-9063909)
chr7 (126-172)||(16307196-16307243)
chr7 (177-212)||(22066784-22066819)
chr7 (39-85)||(46010970-46011017)
chr7 (39-85)||(6185173-6185219)
chr7 (39-85)||(6191689-6191735)
chr7 (47-85)||(11640077-11640115)
chr7 (51-85)||(12677263-12677297)
chr7 (47-85)||(13068258-13068296)
chr7 (114-176)||(13172064-13172126)
chr7 (47-85)||(19332902-19332940)
chr7 (39-85)||(23233041-23233087)
chr7 (39-85)||(23727942-23727988)
chr7 (39-85)||(26902834-26902880)
chr7 (39-85)||(28308522-28308568)
chr7 (47-85)||(30870093-30870131)
chr7 (39-85)||(33576543-33576589)
chr7 (47-85)||(42811225-42811263)
chr7 (179-212)||(3190577-3190610)
chr7 (179-212)||(16297357-16297390)
chr7 (114-176)||(21695806-21695869)
[»] scaffold0758 (1 HSPs)
scaffold0758 (109-176)||(4677-4744)
[»] scaffold0522 (2 HSPs)
scaffold0522 (109-176)||(3875-3942)
scaffold0522 (109-176)||(11158-11225)
[»] scaffold0364 (1 HSPs)
scaffold0364 (109-176)||(10025-10092)
[»] scaffold0074 (1 HSPs)
scaffold0074 (109-176)||(32048-32115)
[»] scaffold0002 (2 HSPs)
scaffold0002 (109-176)||(112613-112680)
scaffold0002 (109-176)||(116221-116288)
[»] scaffold0003 (2 HSPs)
scaffold0003 (39-85)||(14573-14619)
scaffold0003 (39-85)||(421363-421409)
[»] scaffold0040 (1 HSPs)
scaffold0040 (109-174)||(3642-3707)
[»] chr2 (45 HSPs)
chr2 (115-176)||(24158260-24158321)
chr2 (42-85)||(37199451-37199494)
chr2 (39-85)||(11796662-11796708)
chr2 (39-85)||(13873837-13873883)
chr2 (39-85)||(14013962-14014008)
chr2 (39-85)||(33146211-33146257)
chr2 (39-85)||(34247570-34247616)
chr2 (39-85)||(40769222-40769268)
chr2 (40-85)||(34173565-34173610)
chr2 (37-85)||(314618-314666)
chr2 (42-85)||(64827-64870)
chr2 (39-85)||(552014-552060)
chr2 (39-85)||(6229735-6229781)
chr2 (39-85)||(11564320-11564366)
chr2 (126-176)||(15668229-15668279)
chr2 (39-85)||(16110671-16110717)
chr2 (39-85)||(20893396-20893442)
chr2 (47-85)||(35050172-35050210)
chr2 (39-85)||(35899660-35899706)
chr2 (39-85)||(36451143-36451189)
chr2 (39-85)||(37009511-37009557)
chr2 (39-85)||(37329876-37329922)
chr2 (40-85)||(14736309-14736354)
chr2 (114-178)||(26618703-26618766)
chr2 (177-212)||(18121804-18121839)
chr2 (39-85)||(5114122-5114168)
chr2 (39-85)||(8727216-8727262)
chr2 (37-79)||(11564944-11564986)
chr2 (39-85)||(14742678-14742724)
chr2 (39-85)||(31364397-31364443)
chr2 (39-85)||(31597399-31597445)
chr2 (39-85)||(34830926-34830972)
chr2 (39-85)||(35658755-35658801)
chr2 (47-85)||(38911188-38911226)
chr2 (39-85)||(38972986-38973032)
chr2 (39-85)||(41077670-41077716)
chr2 (39-85)||(43657432-43657478)
chr2 (40-85)||(10356638-10356683)
chr2 (40-85)||(11052081-11052126)
chr2 (179-212)||(12950571-12950604)
chr2 (40-85)||(22298102-22298147)
chr2 (39-76)||(40020275-40020312)
chr2 (114-177)||(21846534-21846598)
chr2 (180-212)||(27908705-27908737)
chr2 (41-85)||(33886790-33886834)
[»] chr1 (49 HSPs)
chr1 (109-177)||(18129614-18129682)
chr1 (109-176)||(9347656-9347723)
chr1 (42-85)||(23739324-23739367)
chr1 (39-85)||(19071887-19071933)
chr1 (39-85)||(19119777-19119823)
chr1 (39-85)||(29345015-29345061)
chr1 (39-85)||(46683196-46683242)
chr1 (39-85)||(51361998-51362044)
chr1 (40-85)||(16536549-16536594)
chr1 (40-85)||(47233225-47233270)
chr1 (39-85)||(1386153-1386199)
chr1 (39-85)||(4667394-4667440)
chr1 (39-85)||(17109481-17109527)
chr1 (39-85)||(18572102-18572148)
chr1 (39-85)||(25068512-25068558)
chr1 (39-85)||(28971007-28971053)
chr1 (39-85)||(38011358-38011404)
chr1 (39-85)||(41322035-41322081)
chr1 (39-85)||(41574782-41574828)
chr1 (47-85)||(43320429-43320467)
chr1 (47-85)||(44648804-44648842)
chr1 (39-85)||(50143561-50143607)
chr1 (115-176)||(16478347-16478408)
chr1 (126-175)||(21682811-21682860)
chr1 (40-85)||(27532087-27532132)
chr1 (176-212)||(18735788-18735824)
chr1 (109-173)||(26279641-26279705)
chr1 (41-85)||(41575694-41575738)
chr1 (177-212)||(15543552-15543587)
chr1 (114-176)||(16870392-16870455)
chr1 (109-176)||(18516773-18516840)
chr1 (177-212)||(21666401-21666436)
chr1 (177-212)||(21985542-21985577)
chr1 (177-212)||(22623416-22623451)
chr1 (39-85)||(1846382-1846428)
chr1 (39-85)||(8061548-8061594)
chr1 (39-85)||(9997880-9997926)
chr1 (114-176)||(20909870-20909931)
chr1 (39-85)||(35383444-35383490)
chr1 (39-85)||(37419003-37419049)
chr1 (47-85)||(44645450-44645488)
chr1 (115-176)||(2818940-2819001)
chr1 (39-76)||(7307441-7307478)
chr1 (179-212)||(14781405-14781438)
chr1 (40-85)||(29509989-29510034)
chr1 (39-76)||(33126714-33126751)
chr1 (40-85)||(42831054-42831099)
chr1 (41-82)||(47553662-47553703)
chr1 (124-176)||(23054777-23054829)
[»] scaffold0490 (1 HSPs)
scaffold0490 (109-176)||(7759-7826)
[»] scaffold0683 (1 HSPs)
scaffold0683 (115-177)||(774-836)
[»] scaffold0201 (1 HSPs)
scaffold0201 (39-85)||(15500-15546)
[»] scaffold0388 (1 HSPs)
scaffold0388 (115-176)||(5789-5850)
[»] scaffold1192 (1 HSPs)
scaffold1192 (37-85)||(678-726)
[»] scaffold0023 (1 HSPs)
scaffold0023 (45-80)||(90857-90892)
[»] scaffold0289 (1 HSPs)
scaffold0289 (39-85)||(3897-3943)
[»] scaffold0105 (1 HSPs)
scaffold0105 (39-85)||(19153-19199)
[»] scaffold0067 (1 HSPs)
scaffold0067 (39-85)||(18584-18630)
[»] scaffold0036 (1 HSPs)
scaffold0036 (39-85)||(25394-25440)
[»] scaffold0712 (1 HSPs)
scaffold0712 (39-85)||(4169-4217)
[»] scaffold0709 (1 HSPs)
scaffold0709 (39-85)||(4189-4237)
[»] scaffold0115 (1 HSPs)
scaffold0115 (40-85)||(33188-33233)
[»] scaffold0051 (1 HSPs)
scaffold0051 (40-85)||(11482-11527)
[»] scaffold0037 (1 HSPs)
scaffold0037 (114-174)||(87335-87396)
[»] scaffold0078 (1 HSPs)
scaffold0078 (114-178)||(31375-31438)
[»] scaffold0068 (1 HSPs)
scaffold0068 (39-85)||(25987-26033)
[»] scaffold0043 (2 HSPs)
scaffold0043 (126-176)||(1521-1571)
scaffold0043 (40-85)||(67873-67918)
[»] scaffold0004 (2 HSPs)
scaffold0004 (39-85)||(351445-351491)
scaffold0004 (114-177)||(377182-377246)
[»] scaffold0368 (1 HSPs)
scaffold0368 (40-85)||(11110-11155)
[»] scaffold0001 (1 HSPs)
scaffold0001 (39-76)||(185045-185082)
[»] scaffold0695 (1 HSPs)
scaffold0695 (41-85)||(2401-2445)
[»] scaffold0024 (1 HSPs)
scaffold0024 (179-211)||(40133-40165)
[»] scaffold0009 (1 HSPs)
scaffold0009 (114-178)||(269167-269230)


Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 21847205 - 21846995
Alignment:
Q  2 agctaagctcacgaggacacactttcannnnnnnnagcataaatcaatatttttataatatatactaattttgaatcaccatttnnnnnnntcatttctt 101  Q
    ||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||||||||||| |||||||||||       |||||||||    
T  21847205 agctaagctcaagaggacacactttaattttttttagcataaatcaatatttttataatatatactaattttaaatcaccatttaaaaaaatcatttctt 21847106  T
Q  102 tataattttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatgcccatctatgaatcttaggacac 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21847105 tataattttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcatattttgttccaacatgcccatctatgaatcttaggacac 21847006  T
Q  202 taatagcacac 212  Q
    |||||||||||    
T  21847005 taatagcacac 21846995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 31127098 - 31127031
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  31127098 ttgactttttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 31127031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 24399087 - 24399151
Alignment:
Q  112 actttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  24399087 actttttaataccttgttatcatcaaaacttaaggtgataatgttaaacacattttgttccaaca 24399151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 13145503 - 13145570
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||| || | ||||||||||||    
T  13145503 ttgactttttgatatcttgttaccatcaaaacttaaggtggtaatgttaaacacagtttgttccaaca 13145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 23005755 - 23005692
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  23005755 tttttaataccttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttccaaca 23005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 23782611 - 23782674
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  23782611 tttttaataccttgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttccaaca 23782674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 2092237 - 2092191
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  2092237 cataaataaatatttttataatatatattaattttgaatcaccattt 2092191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 9241427 - 9241381
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  9241427 cataaataaatattcttataatatatactaattttgaatcaccattt 9241381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 10704287 - 10704237
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||||||||||||||||||||||||| || || |||||||||||    
T  10704287 tgttatcatcaaaacttaaggtggtaatgttaaacacatattgttccaaca 10704237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 21802502 - 21802456
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  21802502 cataaataaatatttttataatatatattaattttgaatcaccattt 21802456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 33950783 - 33950737
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33950783 cataaataaatatttttataatatatattaattttgaatcaccattt 33950737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 25596108 - 25596156
Alignment:
Q  129 tatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  25596108 tatcatcaaaacttaaggtggcaatgttaagcacattttattccaacat 25596156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 187958 - 188004
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  187958 cataaataaatattcttataatatatattaattttgaatcaccattt 188004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 2522852 - 2522890
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  2522852 aatatttttataatatatactaattttgaatcacgattt 2522890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6937802 - 6937756
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  6937802 cataaataaatatttttatgatatatactaattttgaatcacgattt 6937756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 12025704 - 12025750
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  12025704 cataaataaatattcttataatatatattaattttgaatcaccattt 12025750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 12409599 - 12409637
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  12409599 aatatttttataatatatactaattttgaattaccattt 12409637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 14873585 - 14873539
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  14873585 cataaataaatattcttataatatatattaattttgaatcaccattt 14873539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 15499393 - 15499347
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  15499393 cataaataaatatttttttaatatatattaattttgaatcaccattt 15499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 23231575 - 23231637
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttc 171  Q
    |||||||||||||| | |||||||||||||| |||||||| |||| |||| || |||||||||    
T  23231575 ttgactttttaataccttgttatcatcaaaatttaaggtgctaatattaaacacattttgttc 23231637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 34250604 - 34250558
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||    
T  34250604 cataaataaatatttttataatatctattaattttgaatcaccattt 34250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 18171733 - 18171672
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttccaa 174  Q
    ||||||||| | ||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  18171733 tttttaataccttgttatcataaaaacttaaaggtggtaatgttaaacacattttgttccaa 18171672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 34794037 - 34794074
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  34794037 cataaatcaatatttttatgatatatactaattttgaa 34794074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 32522014 - 32522058
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  32522014 taaataaatatttttataatatatattaattgtgaatcaccattt 32522058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 19626265 - 19626327
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||| | |||||||||||||||| || | ||||||||||| || |||||||||||||||    
T  19626265 tttttaataccttgttatcatcaaaactcaaag-ggtaatgttaaacacattttgttccaacat 19626327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 26186111 - 26186178
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||| ||| ||| | |||||||||||||||||||||| |  ||||||| || ||||||||||||||    
T  26186111 ttgactctttcataccttgttatcatcaaaacttaaggtcgcgatgttaaacacattttgttccaaca 26186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 3767251 - 3767297
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||  ||||| |||||||||||| |||||||||||||||||||    
T  3767251 cataaatacatattcttataatatatattaattttgaatcaccattt 3767297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9517267 - 9517301
Alignment:
Q  178 gcccatctatgaatcttaggacactaatagcacac 212  Q
    ||||||||||||||||||||||||| |||||||||    
T  9517267 gcccatctatgaatcttaggacactcatagcacac 9517301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 19876235 - 19876297
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| |||||||||||||||||  || |||||| || ||| || ||||||||||||||    
T  19876235 tttttaataccatgttatcatcaaaacacaaagtggtattgctaaacacattttgttccaaca 19876297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 22268942 - 22268896
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  22268942 cataaataaatatttttatgatatatattaattttgaatcatcattt 22268896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 24620446 - 24620400
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| || |||||||||||||||| |||||| ||||||||||||    
T  24620446 cataaataaacatttttataatatatattaatttcgaatcaccattt 24620400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 32114305 - 32114259
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  32114305 cataaataaatatttttatgatatatattaattttgaaccaccattt 32114259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 34280203 - 34280249
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||| | |||||||||||| |||||||||||||||||||    
T  34280203 cataaataaatactcttataatatatattaattttgaatcaccattt 34280249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 12767504 - 12767467
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  12767504 cataaattaatatttttatgatatatactaattttgaa 12767467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 14638103 - 14638136
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  14638103 cccatctatgaatcttaggacactcatagcacac 14638136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 22813313 - 22813280
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  22813313 cccatctatgaatcttaggacactcatagcacac 22813280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 2655114 - 2655158
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccat 83  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||    
T  2655114 cataaataaatatttttatgatatatattaattttgaaccaccat 2655158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 12348564 - 12348627
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatg 178  Q
    ||||||||| | |||||||||||||||| || | | ||||||||| || ||||||||||||||||    
T  12348564 tttttaataccttgttatcatcaaaactcaaag-gataatgttaaacacattttgttccaacatg 12348627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 17381870 - 17381936
Alignment:
Q  114 tttttaatatcatgttatcatcaaaact--taaggtggtaatgttaagcagattttgttccaacatgc 179  Q
    ||||||||| | ||||||||||||||||  ||||| | ||||||||| || |||||||||||||||||    
T  17381870 tttttaataccttgttatcatcaaaactcttaagg-gttaatgttaaacacattttgttccaacatgc 17381936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 20005488 - 20005456
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcaca 211  Q
    |||||||||||||||||||||||| ||||||||    
T  20005488 cccatctatgaatcttaggacactcatagcaca 20005456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 13699733 - 13699800
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  13699733 ttgactttttaatatcttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 13699800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 16794047 - 16793980
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | ||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  16794047 ttgactttttaataccttgttatcatcaaaacttaaggtggtaaagttaaacacattttgttccaaca 16793980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 21317732 - 21317799
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||| ||||||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  21317732 ttgactctttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 21317799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 13654340 - 13654404
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttcca 173  Q
    |||||||||||||| | ||||||||||||||||||||||| ||||||||| || |||||||||||    
T  13654340 ttgactttttaataccttgttatcatcaaaacttaaggtgataatgttaaacacattttgttcca 13654404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 50722144 - 50722211
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  50722144 ttgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtttcaaca 50722211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 50790705 - 50790638
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  50790705 ttgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtttcaaca 50790638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 6252591 - 6252524
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||||||   ||||||||| ||||||||||||||||||||||| || |||||||| |||||    
T  6252591 ttgactttttaatactttgttatcattaaaacttaaggtggtaatgttaaacacattttgtttcaaca 6252524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 3090316 - 3090270
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  3090316 cataaataaatatttttataatatatattaattttgaatcaccattt 3090270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 3540981 - 3540935
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  3540981 cataaataaatatttttataatatatattaattttgaatcaccattt 3540935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 11345257 - 11345211
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  11345257 cataaataaatatttttataatatatattaattttgaatcaccattt 11345211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 13625427 - 13625473
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13625427 cataaataaatatttttataatatatattaattttgaatcaccattt 13625473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 18364809 - 18364855
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  18364809 cataaataaatatttttataatatatattaattttgaatcaccattt 18364855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 19705821 - 19705871
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  19705821 tgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 19705871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 27851963 - 27852013
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  27851963 tgttatcatcaaaatttaaggtggtaatgttaaatagattttgttccaaca 27852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 11514230 - 11514291
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | |||||||||||||||||||||||  |||||||| || ||||||||||||||    
T  11514230 ttttaataccttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 11514291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 33114782 - 33114827
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  33114782 ataaataaatatttttataatatatactaattttgaatcacgattt 33114827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 47794549 - 47794504
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  47794549 ataaataaatatttttataatatatattaattttgaatcaccattt 47794504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 6174478 - 6174411
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||||||   | ||||||| ||||||||||||||||||||||| || |||||||| |||||    
T  6174478 ttgactttttaatacttttttatcattaaaacttaaggtggtaatgttaaacacattttgtttcaaca 6174411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 7477936 - 7478003
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||| ||||||||||||||||||||||||| || || |||||||| |||||    
T  7477936 ttgacattttaataccttgttttcatcaaaacttaaggtggtaatgtgaaacacattttgtttcaaca 7478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 7494701 - 7494768
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| ||||||||   |||||||||||||||||||||||||||| | || || ||||||||||||||    
T  7494701 ttgacattttaatactttgttatcatcaaaacttaaggtggtaatatgaaacacattttgttccaaca 7494768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 32255230 - 32255273
Alignment:
Q  42 aaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  32255230 aaataaatatttttataatatatactaattttgaatcacgattt 32255273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 1363950 - 1363904
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  1363950 cataaataaatatttttatgatatatactaattttgaaccaccattt 1363904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 3087930 - 3087980
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||| |||||||||||| ||||||||||||| || ||||||||||||||    
T  3087930 tgttattatcaaaacttaatgtggtaatgttaaacaaattttgttccaaca 3087980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 4758023 - 4757977
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  4758023 cataaataaatattcttataatatatattaattttgaatcaccattt 4757977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 11056453 - 11056407
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  11056453 cataaataaatattcttataatatatattaattttgaatcaccattt 11056407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 12968785 - 12968846
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| |||||||||||||||| || | ||||||||||| || ||||||||||||||    
T  12968785 tttttaatatcttgttatcatcaaaactcaaag-ggtaatgttaaacacattttgttccaaca 12968846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 16067403 - 16067449
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||    
T  16067403 cataaataaatatttttataatatatataaattttgaatcaccattt 16067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23309125 - 23309171
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  23309125 cataaataaatattcttataatatatattaattttgaatcaccattt 23309171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 27255473 - 27255511
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  27255473 aatatttttataatatatactaattttgaatcacaattt 27255511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 27639047 - 27639001
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||    
T  27639047 cataaataaatatttttataatatatcttaattttgaatcaccattt 27639001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 32736863 - 32736909
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  32736863 cataaataaatattcttataatatatattaattttgaatcaccattt 32736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 37183648 - 37183602
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  37183648 cataaataaatattcttataatatatattaattttgaatcaccattt 37183602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 53490598 - 53490552
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  53490598 cataaataaatatttttttaatatatattaattttgaatcaccattt 53490552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 16882730 - 16882791
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttccaa 174  Q
    ||||||||| | | ||||||||||||||||| |||||||||||||| || ||||||||||||    
T  16882730 tttttaataccttattatcatcaaaacttaaaggtggtaatgttaaacacattttgttccaa 16882791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 20418609 - 20418658
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaa 158  Q
    ||||| |||||||| | |||| ||||||||||||||||||||||||||||    
T  20418609 ttgacattttaataccttgttgtcatcaaaacttaaggtggtaatgttaa 20418658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 14077097 - 14077033
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatg 178  Q
    ||||||||| | |||||||||||||||| || |||||| ||| || || ||||||||||||||||    
T  14077097 tttttaataccctgttatcatcaaaactcaaagtggtattgtcaaacacattttgttccaacatg 14077033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 15648134 - 15648201
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||| ||||||||| | ||||||| ||||||||||| | | ||||||||| || ||||||||||||||    
T  15648134 ttgaatttttaataccttgttatcgtcaaaacttaaagagataatgttaaacacattttgttccaaca 15648201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 22524688 - 22524645
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcacca 82  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||    
T  22524688 cataaataaatattcttataatatatattaattttgaatcacca 22524645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 1262584 - 1262622
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  1262584 aatatttttataatatatattaatattgaatcaccattt 1262622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 4242917 - 4242855
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| |||||||||||||||| ||  ||||| |||||| || ||| ||||||||||    
T  4242917 tttttaatatcttgttatcatcaaaactcaaaatggtattgttaaacacattatgttccaaca 4242855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 6713507 - 6713568
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||| || | | |||||||||||| ||||||||||||||    
T  6713507 tttttaataccttgttatcatcaaaactcaaag-gataatgttaagcacattttgttccaaca 6713568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 10852205 - 10852267
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||| || |||||| ||| || || ||||||||||||||    
T  10852205 tttttaataccttgttatcatcaaaactaaaagtggtattgtcaaacacattttgttccaaca 10852267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 12373520 - 12373486
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacaca 213  Q
    ||||||||||||||||||||||| |||||||||||    
T  12373520 cccatctatgaatcttaggacacaaatagcacaca 12373486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 12397555 - 12397616
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| |||||||||||||||||||   |||||||||||  | ||||||||||||||    
T  12397555 tttttaatatcttgttatcatcaaaacttaa-aaggtaatgttaaagacattttgttccaaca 12397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 17764865 - 17764820
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  17764865 cataaataaatattttt-taatatatattaattttgaatcaccattt 17764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 19066185 - 19066140
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  19066185 cataaataaatattttt-taatatatattaattttgaatcaccattt 19066140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 19197580 - 19197519
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||| |  ||||||||||||||    
T  19197580 tttttaataccttgttatcatcaaaacttaaag-ggtaatgttaaacgcattttgttccaaca 19197519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 26057650 - 26057604
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  26057650 cataaataaatatttttatgatatatactaattttgaactaccattt 26057604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 32374296 - 32374258
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  32374296 aatatttttataatatatattaatattgaatcaccattt 32374258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 40036293 - 40036247
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  40036293 cataaataaatatttttatgatatatattaattttgaaccaccattt 40036247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 41587210 - 41587164
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| | ||||||||||||||||| |||||||||||||| ||||    
T  41587210 cataaataattatttttataatatatattaattttgaatcacgattt 41587164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 41865165 - 41865211
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||| |||||||| |||||||||||||||||||    
T  41865165 cataaataaatattcttaaaatatatattaattttgaatcaccattt 41865211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 7724746 - 7724783
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  7724746 cataaataaatatttttatgatatatactaattttgaa 7724783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 8319603 - 8319636
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  8319603 cccatctatgaatcttaggacactcatagcacac 8319636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 11388579 - 11388624
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccatt 84  Q
    ||||||| ||||||||||| ||||||| |||||||||| |||||||    
T  11388579 cataaataaatatttttatgatatatattaattttgaaccaccatt 11388624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 16245277 - 16245244
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  16245277 cccatctatgaatcttaggacactcatagcacac 16245244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 25259426 - 25259463
Alignment:
Q  48 atatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  25259426 atatttttatgatatatactaattttgaaccaccattt 25259463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 32221984 - 32221947
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  32221984 cataaataaatatttttatgatatatactaattttgaa 32221947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 1779665 - 1779701
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaa 76  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  1779665 ataaattaatatttttatgatatatactaattttgaa 1779701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 48841920 - 48841880
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatca 79  Q
    ||||||| |||||||||||| |||||| |||||||||||||    
T  48841920 cataaataaatatttttatagtatatattaattttgaatca 48841880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 1575 - 1511
Alignment:
Q  112 actttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  1575 actttttaatatcttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 8979 - 8912
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  8979 ttgactttttaataccttgttatcatcaaaacataaggtggtaatgttaaacacattttgttccaaca 8912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 22711009 - 22711076
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  22711009 ttgactttttaataccttgttatcatcaaaacttaaggtggaaatgttaaacacattttgttccaaca 22711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 23192328 - 23192261
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  23192328 ttgactttttaataccttgttatcatcaaaacttaaggtggtaatgttaaactcattttgttccaaca 23192261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 4257129 - 4257083
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4257129 cataaataaatatttttataatatatactaattttgaatcaccattt 4257083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 17564846 - 17564892
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  17564846 cataaataaatatttttataatatatactaattttgaatcaccattt 17564892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 30056465 - 30056510
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccatt 84  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  30056465 cataaataaatatttttataatatatactaattttgaatcaccatt 30056510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 13421591 - 13421637
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13421591 cataaataaatatttttataatatatattaattttgaatcaccattt 13421637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 30354425 - 30354379
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  30354425 cataaataaatatttttataatatatactaattttgaatcacgattt 30354379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 32904835 - 32904876
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcac 80  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  32904835 cataaataaatatttttataatatatactaattttgaatcac 32904876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 37837099 - 37837144
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  37837099 ataaataaatatttttataatatatattaattttgaatcaccattt 37837144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 45488326 - 45488371
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||    
T  45488326 ataaataaatatttttataatatatactaatttcgaatcaccattt 45488371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 24778556 - 24778512
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  24778556 taaataaatatttttataatatatattaattttgaatcaccattt 24778512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 13439665 - 13439703
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13439665 aatatttttataatatatattaattttgaatcaccattt 13439703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 17496439 - 17496485
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  17496439 cataaataaatatttttttaatatatattaattttgaatcaccattt 17496485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 22934844 - 22934798
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  22934844 cataaataaatattcttataatatatattaattttgaatcaccattt 22934798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 23352806 - 23352745
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||| || | |||||||||||||| ||||||||||||||    
T  23352806 tttttaataccttgttatcatcaaaactcaaag-ggtaatgttaagcacattttgttccaaca 23352745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 25597963 - 25598009
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  25597963 cataaataaatattcttataatatatattaattttgaatcaccattt 25598009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 29635897 - 29635943
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  29635897 cataaataaatattcttataatatatattaattttgaatcaccattt 29635943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 33972869 - 33972823
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  33972869 cataaataaatatttttatgatatatactaattttgaaccaccattt 33972823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 34678774 - 34678820
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  34678774 cataaataaatatttttataatatatattaattttgaatcactattt 34678820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 39998935 - 39998889
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  39998935 cataaataaatatttttttaatatatattaattttgaatcaccattt 39998889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 44746353 - 44746399
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  44746353 cataaataaatatttttataacatatattaattttgaatcaccattt 44746399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 1208404 - 1208343
Alignment:
Q  116 tttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcaga-ttttgttccaaca 176  Q
    ||||||| | |||||||||||||||||||||||| |||||||| || | |||||||||||||    
T  1208404 tttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacatttttgttccaaca 1208343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 12194308 - 12194369
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||  |||||||||||||||||||||||  |||||||| || ||||| ||||||||    
T  12194308 ttttaatattttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 12194369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 12438736 - 12438797
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||  |||||||||||||||||||||||  |||||||| || ||||| ||||||||    
T  12438736 ttttaatattttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 12438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 14364346 - 14364301
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||    
T  14364346 ataaataaatattcttataatatatattaattttgaatcaccattt 14364301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 17916536 - 17916487
Alignment:
Q  128 ttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttccaaca 176  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  17916536 ttattatcaaaacttaaaggtggtaatgttaagcatattttgttccaaca 17916487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 23892787 - 23892751
Alignment:
Q  176 atgcccatctatgaatcttaggacactaatagcacac 212  Q
    ||||||||||||||||||||||||||| |||||||||    
T  23892787 atgcccatctatgaatcttaggacactcatagcacac 23892751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 3940115 - 3940069
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||  ||||||||    
T  3940115 cataaataaatatttttatgatatatactaattttgagccaccattt 3940069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 6293075 - 6293037
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  6293075 aatattcttataatatatattaattttgaatcaccattt 6293037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 11759957 - 11759919
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  11759957 aatatttttataatatatattaatattgaatcaccattt 11759919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 17734810 - 17734764
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  17734810 cataaataaatatttttatgatatatattaattttgaaccaccattt 17734764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 24809763 - 24809809
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  24809763 cataaataaatatttttatgatatatactaattttgaactaccattt 24809809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 40299485 - 40299439
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| | ||||||||||||||||| ||||||||||| |||||||    
T  40299485 cataaataattatttttataatatatattaattttgaattaccattt 40299439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 42166199 - 42166245
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| || |||||| ||||||||| |||||||||||||||||||    
T  42166199 cataaataaacatttttttaatatatattaattttgaatcaccattt 42166245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 8438464 - 8438419
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||    
T  8438464 ataaataaatatttttataatatataccaattttgaaccatcattt 8438419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 25482776 - 25482821
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| || ||| |||||||||||| |||||||||||||||||||    
T  25482776 ataaataaacattcttataatatatattaattttgaatcaccattt 25482821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 44284248 - 44284211
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  44284248 cataaataaatatttttatgatatatactaattttgaa 44284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 14094046 - 14094002
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  14094046 taaataaatatttttatgatatataataattttgaaccaccattt 14094002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 25182011 - 25181979
Alignment:
Q  180 ccatctatgaatcttaggacactaatagcacac 212  Q
    ||||||||||||||||||||||||||| |||||    
T  25182011 ccatctatgaatcttaggacactaataacacac 25181979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 43645220 - 43645283
Alignment:
Q  114 tttttaatatcatgttatcatcaaaact-taaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||| | |||||||||||||||| ||| | ||||||||||| || |||||||||||||||    
T  43645220 tttttaataccttgttatcatcaaaactctaaag-ggtaatgttaaacacattttgttccaacat 43645283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 20969619 - 20969686
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  20969619 ttgactttttaagaccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 20969686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 8437918 - 8437963
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  8437918 ataaataaatatttttataatatatactaattttgaatcaccattt 8437963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 20237137 - 20237076
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | |||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  20237137 ttttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 20237076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 23590163 - 23590227
Alignment:
Q  112 actttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| | ||||||||||||||||||| |||||| |||||| || ||||||||||||||    
T  23590163 actttttaataccttgttatcatcaaaacttaaagtggtattgttaaacatattttgttccaaca 23590227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 39798649 - 39798582
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||||||||||||| ||||||||||||||||||  | ||||||||||||||    
T  39798649 ttgacattttaataccttgttatcatcaaaaattaaggtggtaatgttaaatacattttgttccaaca 39798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 19409102 - 19409056
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19409102 cataaataaatatttttataatatatattaattttgaatcaccattt 19409056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 2553748 - 2553793
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||    
T  2553748 ataaataaatatttttataatatatactaattttgaatcatcattt 2553793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 20570338 - 20570383
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  20570338 ataaataaatatttttataatatatattaattttgaatcaccattt 20570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 6029790 - 6029833
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcacca 82  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  6029790 cataaataaatatttttataatatatattaattttgaatcacca 6029833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 26251508 - 26251571
Alignment:
Q  114 tttttaatatcatgttatcatcaaaactt-aaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | ||||||||||||||||| ||||||||| |||||| || ||||||||||||||    
T  26251508 tttttaataccttgttatcatcaaaacttaaaggtggtagtgttaaacacattttgttccaaca 26251571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 4055295 - 4055249
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  4055295 cataaataaatattcttataatatatattaattttgaatcaccattt 4055249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 5138862 - 5138816
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  5138862 cataaataaatatttttataatatatattaattttgaatcatcattt 5138816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 10687765 - 10687811
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  10687765 cataaataaatatttttatgatatatactaattttgaaccaccattt 10687811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 13686146 - 13686192
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  13686146 cataaataaatatttttttaatatatattaattttgaatcaccattt 13686192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 20540868 - 20540822
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  20540868 cataaataaatattcttataatatatattaattttgaatcaccattt 20540822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 21639584 - 21639538
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  21639584 cataaataaatatttttttaatatatattaattttgaatcaccattt 21639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 37334091 - 37334137
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  37334091 cataaataaatattcttataatatatattaattttgaatcaccattt 37334137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 31588743 - 31588682
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | ||||| ||||| ||||||||||||| ||||||| || ||||||||||||||    
T  31588743 ttttaataccttgttaccatcagaacttaaggtggtcatgttaaacatattttgttccaaca 31588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 19008131 - 19008095
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacaca 213  Q
    |||||||||||||||||||||||||| ||||||||||    
T  19008131 tgcccatctatgaatcttaggacactcatagcacaca 19008095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 19749905 - 19749961
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgtt 170  Q
    ||||||||| | |||||||||||||||| ||||||||| |||||| || ||||||||    
T  19749905 tttttaataccttgttatcatcaaaactcaaggtggtattgttaaacacattttgtt 19749961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 18338085 - 18338041
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||    
T  18338085 cataaataaatatttttataatatat--taattttgaatcaccattt 18338041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 18523904 - 18523947
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcacca 82  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||    
T  18523904 cataaataaatatttttatgatatatactaattttgaaccacca 18523947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 24659601 - 24659566
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  24659601 tgcccatctatgaatcttaggacactcatagcacac 24659566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 30783274 - 30783231
Alignment:
Q  42 aaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||    
T  30783274 aaataaatatttttatgatatatactaattttgaaccaccattt 30783231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 34129117 - 34129152
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  34129117 tgcccatctatgaatcttaggacacttatagcacac 34129152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 38955455 - 38955412
Alignment:
Q  42 aaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||    
T  38955455 aaataaatatttttataatatatattaattttgaatcatcattt 38955412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 14594251 - 14594297
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||| ||||||||||| |||||||| ||||||||||    
T  14594251 cataaataaatatttgtataatatataataattttgtatcaccattt 14594297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 15144968 - 15144930
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  15144968 aatatttttataatatatattaattttgaattaccattt 15144930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 20691302 - 20691348
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||||    
T  20691302 cataaataaatattcttatattatatattaattttgaatcaccattt 20691348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 21687923 - 21687877
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  21687923 cataaataaatatttttatgatatatattaattttgaaccaccattt 21687877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 22730957 - 22730911
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||| |||||| |||||||||||||| ||||    
T  22730957 cataaataaatatttttatagtatatattaattttgaatcacgattt 22730911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 27275930 - 27275880
Alignment:
Q  130 atcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatgcc 180  Q
    ||||||||||| ||||||| ||||||||| || ||||||||||| ||||||    
T  27275930 atcatcaaaacataaggtgataatgttaaacacattttgttccatcatgcc 27275880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 27979408 - 27979454
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  27979408 cataaataaatatttttatgatatatattaattttgaaccaccattt 27979454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 31601441 - 31601396
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  31601441 cataaataaatatttttataatatatattaa-tttgaatcaccattt 31601396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 36762072 - 36762026
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||| |||||||||||| ||||||||    
T  36762072 cataaataaatatttttatgatataaactaattttgaaccaccattt 36762026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 36762291 - 36762337
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  36762291 cataaataaatatttttatgatatatattaattttgaaccaccattt 36762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 1406132 - 1406087
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||    
T  1406132 ataaataaatatttttataatatataccaattttgaaccatcattt 1406087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 13692805 - 13692854
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaa 158  Q
    ||||||||| |||| | ||||||| |||||||||||| ||||||||||||    
T  13692805 ttgacttttcaataccttgttatcgtcaaaacttaagatggtaatgttaa 13692854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 20549290 - 20549257
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  20549290 cccatctatgaatcttaggacactcatagcacac 20549257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 23336095 - 23336128
Alignment:
Q  180 ccatctatgaatcttaggacactaatagcacaca 213  Q
    ||||||||||||||||||||||||||| ||||||    
T  23336095 ccatctatgaatcttaggacactaatatcacaca 23336128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 32348375 - 32348330
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  32348375 ataaataaatatttttatgatatataataattttgaaccaccattt 32348330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 40956931 - 40957001
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccatttnnnnnnntcatttctttataattt 109  Q
    ||||||| ||||||||||| ||||||  |||||||||| ||||||||       |||||||||||||||||    
T  40956931 cataaataaatatttttatgatatattttaattttgaaccaccatttaaaaaaatcatttctttataattt 40957001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 6512166 - 6512102
Alignment:
Q  114 tttttaatatcatgttatcatcaaaac-ttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||| | ||||||||||||||| || |   ||||||||||| ||||||||||||||||||    
T  6512166 tttttaataccttgttatcatcaaaaccttcaaagggtaatgttaaacagattttgttccaacat 6512102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 31850182 - 31850218
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaa 76  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  31850182 ataaataaatatttttattatatatactaattttgaa 31850218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 38497536 - 38497572
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaa 76  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  38497536 ataaataaatatttttatgatatatactaattttgaa 38497572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 40027107 - 40027151
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||    
T  40027107 taaataaatatttttacgatatatactaattttgaaccaccattt 40027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 14356844 - 14356777
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14356844 ttgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaaca 14356777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 21350298 - 21350231
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  21350298 ttgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgtttcaaca 21350231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 13772282 - 13772236
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13772282 cataaataaatatttttataatatatattaattttgaatcaccattt 13772236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 18362595 - 18362549
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  18362595 cataaataaatatttttataatatatactaattttgaatcacaattt 18362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 36600331 - 36600377
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  36600331 cataaataaatatttttataatatatactaattttgaatcacaattt 36600377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 37424345 - 37424299
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  37424345 cataaataaatatttttataatatatattaattttgaatcaccattt 37424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 50825183 - 50825137
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  50825183 cataaataaatatttttataatatatattaattttgaatcaccattt 50825137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 55814861 - 55814815
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  55814861 cataaataaatatttttataatatatactaattttgaatcacgattt 55814815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 14867267 - 14867218
Alignment:
Q  128 ttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||    
T  14867267 ttatcatcaaaacttatggtggtaatgttaaacacattttgttccaacat 14867218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 20577665 - 20577726
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | |||||||||||||||||||||||  |||||||| || ||||||||||||||    
T  20577665 ttttaataccttgttatcatcaaaacttaaggtgaaaatgttaaacacattttgttccaaca 20577726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 20544918 - 20544870
Alignment:
Q  37 agcataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  20544918 agcataaataaatatttttataacatatattaattttgaatcaccattt 20544870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 2652167 - 2652234
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | |||||||||||||||| |||||| || |||||| || ||||||||| ||||    
T  2652167 ttgactttttaataccttgttatcatcaaaactaaaggtgatagtgttaaacacattttgttcaaaca 2652234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 10250264 - 10250326
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||| || |||||||||||||||    
T  10250264 tttttaataccttgttatcatcaaaacttaaag-ggtaatgttaaacacattttgttccaacat 10250326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 755053 - 755091
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  755053 aatatttttataatatatactaattttgaatcacaattt 755091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 796871 - 796825
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  796871 cataaataaatattcttataatatatattaattttgaatcaccattt 796825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 4950119 - 4950157
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4950119 aatatttttataatatatattaattttgaatcaccattt 4950157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 6232609 - 6232655
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  6232609 cataaataaatattcttataatatatattaattttgaatcaccattt 6232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 7165583 - 7165629
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  7165583 cataaataaatattcttataatatatattaattttgaatcaccattt 7165629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 19888813 - 19888751
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | | ||||||||||||| || |||||||||||||| || ||||||||||||||    
T  19888813 tttttaatacctttttatcatcaaaacgtatggtggtaatgttaaacacattttgttccaaca 19888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 23265672 - 23265626
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  23265672 cataaataaatattcttataatatatattaattttgaatcaccattt 23265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 23309367 - 23309321
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  23309367 cataaataaatattcttataatatatattaattttgaatcaccattt 23309321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 39100399 - 39100445
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||    
T  39100399 cataaataaatatttttataatatatactaattttgagtcgccattt 39100445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 12417284 - 12417220
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatgc 179  Q
    ||||||||| | |||||||||||||||| || | ||||||||||| || |||||||||||||||||    
T  12417284 tttttaataccttgttatcatcaaaactcaaag-ggtaatgttaaacacattttgttccaacatgc 12417220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 29429597 - 29429560
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29429597 cataaatcaatatttttatgatatatactaattttgaa 29429560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 47030005 - 47030050
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||    
T  47030005 ataaataaatattcttataatatatattaattttgaatcaccattt 47030050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 53102638 - 53102601
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  53102638 cataaatcaatatttttatgatatatactaattttgaa 53102601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 26705212 - 26705256
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||    
T  26705212 taaataaataattttataatatatattaattttgaatcaccattt 26705256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 35853735 - 35853775
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatca 79  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  35853735 cataaataaatatttttataatatatattaattttgaatca 35853775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 17025931 - 17025896
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  17025931 tgcccatctatgaatcttaggacactcatagcacac 17025896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 721869 - 721831
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  721869 aatatttttataatatatgctaattttgaatcacaattt 721831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 4964074 - 4964120
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  4964074 cataaataaatatttttatgatatataataattttgaaccaccattt 4964120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 11901656 - 11901717
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||| || | ||||||||||| || ||||||||||||||    
T  11901656 tttttaataccttgttatcatcaaaactcaaag-ggtaatgttaaacacattttgttccaaca 11901717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 12250861 - 12250907
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||  ||||| |||||||||||| |||||||||||||||||||    
T  12250861 cataaatatatattcttataatatatattaattttgaatcaccattt 12250907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 21037475 - 21037521
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  21037475 cataaataaatatttttatgatatatactaattttgaactaccattt 21037521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 26808558 - 26808604
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  26808558 cataaataaatatttttatgatatatattaattttgaaccaccattt 26808604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 29979223 - 29979269
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| || ||||||||||||||| ||||||||    
T  29979223 cataaataaatatttttatgatgtatactaattttgaaccaccattt 29979269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 33046737 - 33046783
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  33046737 cataaataaatatttttatgatatatattaattttgaaccaccattt 33046783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 37709467 - 37709421
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  37709467 cataaataaatatttttatgatatatattaattttgaaccaccattt 37709421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 37734866 - 37734908
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcacca 82  Q
    |||||| |||||||||||| |||||| ||||||||||||||||    
T  37734866 ataaataaatatttttatattatatattaattttgaatcacca 37734908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 38720504 - 38720466
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  38720504 aatatttttataatatatattaattttgaaccaccattt 38720466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 50264558 - 50264604
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||    
T  50264558 cataaataaatatttttttaatatatattaatttagaatcaccattt 50264604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 54092736 - 54092690
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||| ||||||||||| |||||||||||| ||||||    
T  54092736 cataaataaatatttgtataatatatattaattttgaatctccattt 54092690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 56309591 - 56309637
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  56309591 cataaataaatatttttatgatatatattaattttgaaccaccattt 56309637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 17812074 - 17812014
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | ||||||||||||||||||| |||  |||||||| || ||||||||||||||    
T  17812074 ttttaataccttgttatcatcaaaacttaa-gtgacaatgttaaacacattttgttccaaca 17812014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 20544792 - 20544833
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcacca 82  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||    
T  20544792 taaataaatatttttataacatatattaattttgaatcacca 20544833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 55139907 - 55139862
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  55139907 ataaataaatatttttatgatatatattaattttgaatcatcattt 55139862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 10556149 - 10556113
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaa 76  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  10556149 ataaataaatatttttatgatatatactaattttgaa 10556113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 36650782 - 36650826
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||| ||||||||||||||||||  |||||||    
T  36650782 taaataaatatttttatgatatatactaattttgaactaccattt 36650826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 36897995 - 36897951
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  36897995 taaataaatatttttatgatatataataattttgaaccaccattt 36897951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 1375 - 1314
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||| |||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  1375 ttttaatatcttgttatcatcaaaatttaaggtggtaatgttaaacacattttgttccaaca 1314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 560 - 499
Alignment:
Q  117 ttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatg 178  Q
    |||||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  560 ttaataccttgttatcatcaaaacttaaggtggtaatgttaaacacattttgttccaacatg 499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 5035738 - 5035806
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  5035738 ttgacattttaataccttgttatcatcaaaacttaaggtggtaatgttaaatacattttgttccaacat 5035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 16425906 - 16425860
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  16425906 cataaataaatatttttataatatatactaattttgaatcaccattt 16425860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 18361364 - 18361302
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  18361364 tttttaataccttgttatcatcaaaacttaaggtggcaatgttaaacacattttgttccaaca 18361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 18047642 - 18047575
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||||||||||||||||||||||  |||||||| || ||||||||||||||    
T  18047642 ttgacattttaataccttgttatcatcaaaacttaaggtgaaaatgttaaacacattttgttccaaca 18047575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 8123173 - 8123127
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  8123173 cataaataaatatttttataatatatattaattttgaatcaccattt 8123127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 16307447 - 16307397
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  16307447 tgttatcatcaaaacttaagttggtaatgttaaacacattttgttccaaca 16307397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 25607118 - 25607164
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  25607118 cataaatcaatattcttataatatatattaattttgaatcaccattt 25607164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 27619531 - 27619485
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27619531 cataaataaatatttttataatatatactaattttgaatcacgattt 27619485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 40401733 - 40401779
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  40401733 cataaataaatatttttataatatatattaattttgaatcaccattt 40401779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 20261478 - 20261433
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  20261478 ataaataaatatttttataatatatactaattttgaatcacgattt 20261433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 31873007 - 31872962
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  31873007 ataaataaatatttttataatatatactaattttgaatcacgattt 31872962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 19434800 - 19434840
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatca 79  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  19434800 cataaataaatatttttataatatatactaattttgaatca 19434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 11803548 - 11803583
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    ||||||||||||||||||||||||||||||||||||    
T  11803548 tgcccatctatgaatcttaggacactaatagcacac 11803583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 25827 - 25781
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  25827 cataaataaatattcttataatatatattaattttgaatcaccattt 25781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 317847 - 317801
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  317847 cataaataaatattcttataatatatattaattttgaatcaccattt 317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 2146605 - 2146559
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  2146605 cataaataaatattcttataatatatattaattttgaatcaccattt 2146559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 12679157 - 12679191
Alignment:
Q  51 tttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||||||||||||||||||||||||    
T  12679157 tttttataatatatactaattttgaatcaccattt 12679191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 20115449 - 20115403
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||    
T  20115449 cataaataaatatttttataatatatactaattttaaaccaccattt 20115403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 22711811 - 22711857
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  22711811 cataaataaatatttttataatatatattaattttgaatcacaattt 22711857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23226514 - 23226560
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  23226514 cataaataaatatttttataatatatattaattttgaaccaccattt 23226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23235667 - 23235713
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  23235667 cataaataaatatttttataatatatattaattttgaaccaccattt 23235713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23242702 - 23242748
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  23242702 cataaataaatatttttataatatatattaattttgaaccaccattt 23242748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 31221353 - 31221307
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||    
T  31221353 cataaataaagacttttataatatatactaattttgaatcaccattt 31221307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 38670187 - 38670233
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  38670187 cataaataaatattcttataatatatattaattttgaatcaccattt 38670233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 38987929 - 38987975
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  38987929 cataaataaatatttgtataatatatattaattttgaatcaccattt 38987975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 40344325 - 40344279
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  40344325 cataaataaatattcttataatatatattaattttgaatcaccattt 40344279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 48872188 - 48872234
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||    
T  48872188 cataaatacatatttttataatatatattaattttgaatcaccattt 48872234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 48982050 - 48982096
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||    
T  48982050 cataaataaataattttataatatatattaattttgaatcaccattt 48982096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 9063909 - 9063860
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaa 158  Q
    ||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  9063909 ttgacattttaataccttgttatcattaaaacttaaggtggtaatgttaa 9063860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 16307243 - 16307196
Alignment:
Q  126 tgttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttcc 172  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||||    
T  16307243 tgttatcatcaaaacttaaaggtggtaatgttaaacacattttgttcc 16307196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 22066819 - 22066784
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  22066819 tgcccatctatgaatcttaggacactcatagcacac 22066784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 46011017 - 46010970
Alignment:
Q  39 cataaatcaatatttttataa-tatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||||    
T  46011017 cataaataaatatttttataaatatatattaattttgaatcaccattt 46010970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6185219 - 6185173
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||| |||||||| |||||||||||||||||||    
T  6185219 cataaataaatattcttaaaatatatattaattttgaatcaccattt 6185173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6191735 - 6191689
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||| |||||||| |||||||||||||||||||    
T  6191735 cataaataaatattcttaaaatatatattaattttgaatcaccattt 6191689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 11640077 - 11640115
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  11640077 aatatttttataatatatattaatattgaatcaccattt 11640115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 12677263 - 12677297
Alignment:
Q  51 tttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||| ||||||||||||||||||||    
T  12677263 tttttataatatattctaattttgaatcaccattt 12677297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 13068296 - 13068258
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  13068296 aatatttttttaatatatattaattttgaatcaccattt 13068258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 13172126 - 13172064
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||| || |||||| ||| || || ||||||||||||||    
T  13172126 tttttaataccttgttatcatcaaaactcaaagtggtattgtcaaacacattttgttccaaca 13172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 19332940 - 19332902
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  19332940 aatatttttataatatatattaatattgaatcaccattt 19332902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23233041 - 23233087
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| ||||||||||  |||||||    
T  23233041 cataaataaatatttttataatatatattaattttgaacaaccattt 23233087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 23727942 - 23727988
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  23727942 cataaataaatatttttatgatatatattaattttgaaccaccattt 23727988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 26902834 - 26902880
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| || |||||||| |||||||||||||||||| ||||||||    
T  26902834 cataaataaacatttttatgatatatactaattttgaaccaccattt 26902880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 28308568 - 28308522
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||| ||||| |||||||||||||||||| ||||||||    
T  28308568 cataaataaatatatttatgatatatactaattttgaaccaccattt 28308522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 30870093 - 30870131
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  30870093 aatatttttatgatatatactaattttgaaccaccattt 30870131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 33576589 - 33576543
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  33576589 cataaataaatatttttatgatatatattaattttgaatcaacattt 33576543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 42811225 - 42811263
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  42811225 aatatttttataatatatattaatattgaatcaccattt 42811263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 3190610 - 3190577
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  3190610 cccatctatgaatcttaggacactcatagcacac 3190577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 16297390 - 16297357
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  16297390 cccatctatgaatcttaggacactcatagcacac 16297357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 21695806 - 21695869
Alignment:
Q  114 tttttaatatcatgttatcatcaaaa--cttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| ||||||||||||||  ||||| | ||||||||||| || ||||||||||||||    
T  21695806 tttttaatatcttgttatcatcaaaactcttaaag-ggtaatgttaaacacattttgttccaaca 21695869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 4677 - 4744
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | |||||||||||||||||||||||  |||||||| || ||||||||||||||    
T  4677 ttgactttttaataccttgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaaca 4744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 3942 - 3875
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  3942 ttgacattttaataccttgttatcatcaaaacttaagatggtaatgttaaacacattttgttccaaca 3875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 11225 - 11158
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||||||||||||||||||  |||||||||||| || ||||| ||||||||    
T  11225 ttgacattttaataccttgttatcatcaaaacttaacatggtaatgttaaacacattttattccaaca 11158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 10092 - 10025
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  10092 ttgacattttaataccttgttatcatcaaaatttaaggtggtaatgttaaacacattttgttccaaca 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 32048 - 32115
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | ||||||||||||||||||| ||| ||||||||| || ||||||||||||||    
T  32048 ttgactttttaataccttgttatcatcaaaacttaaagtgataatgttaaacacattttgttccaaca 32115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 112613 - 112680
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||| | ||||||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  112613 ttgactttttaataccttgttatcatcaaaacataaggtggtaacgttaaacacattttgttccaaca 112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 116221 - 116288
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||||| |||||  | ||||||||||||||    
T  116221 ttgaatttttaatatcttgttatcatcaaaacataaagtggtaacgttaaagacattttgttccaaca 116288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 14619 - 14573
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  14619 cataaataaatatttttataatatatactaattttgaatcaccattt 14573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 421363 - 421409
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||||| ||||||||||||||||||||| ||||    
T  421363 cataaataaatattcttatagtatatactaattttgaatcacgattt 421409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 3707 - 3642
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaa 174  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||||| || | ||||||||||    
T  3707 ttgactttttattattttgttatcatcaaaacttaaggtggtaatgttaaacacagtttgttccaa 3642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 24158260 - 24158321
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | ||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  24158260 ttttaataccttgttatcatcaaaacctaaggtggtaatgttaaacacattttgttccaaca 24158321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 37199494 - 37199451
Alignment:
Q  42 aaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  37199494 aaataaatatttttataatatatactaattttgaatcaccattt 37199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 11796708 - 11796662
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  11796708 cataaataaatatttttataatatatattaattttgaatcaccattt 11796662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 13873883 - 13873837
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13873883 cataaataaatatttttataatatatattaattttgaatcaccattt 13873837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 14014008 - 14013962
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  14014008 cataaataaatatttttataatatatattaattttgaatcaccattt 14013962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 33146211 - 33146257
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33146211 cataaataaatatttttataatatatattaattttgaatcaccattt 33146257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 34247570 - 34247616
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  34247570 cataaataaatattcttataatatatactaattttgaatcaccattt 34247616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 40769268 - 40769222
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  40769268 cataaataaatatttttataatatatattaattttgaatcaccattt 40769222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 34173610 - 34173565
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  34173610 ataaataaatatttttataatatatattaattttgaatcaccattt 34173565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 314618 - 314666
Alignment:
Q  37 agcataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  314618 agcataaataaatatttttatgatatatactaattttgaaccaccattt 314666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 64870 - 64827
Alignment:
Q  42 aaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  64870 aaataaatatttttataatatatactaattttgaatcacgattt 64827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 552014 - 552060
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  552014 cataaataaatattcttataatatatattaattttgaatcaccattt 552060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6229781 - 6229735
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  6229781 cataaataaatatttttttaatatatattaattttgaatcaccattt 6229735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 11564366 - 11564320
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||    
T  11564366 cataaatatatatttttataatatatattaattttgaatcaccattt 11564320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 15668279 - 15668229
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||||| || ||||||||||||| || ||||||||||||||    
T  15668279 tgttatcatcaaaactcaatgtggtaatgttaaacacattttgttccaaca 15668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 16110671 - 16110717
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  16110671 cataaataaatattcttataatatatattaattttgaatcaccattt 16110717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 20893396 - 20893442
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  20893396 cataaataaatattcttataatatatattaattttgaatcaccattt 20893442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 35050210 - 35050172
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  35050210 aatatttttatgatatatactaattttgaatcaccattt 35050172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 35899706 - 35899660
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  35899706 cataaataaatattcttataatatatattaattttgaatcaccattt 35899660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 36451143 - 36451189
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||    
T  36451143 cataaatatatatttttataatatatactaattttgaaccaccattt 36451189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 37009557 - 37009511
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  37009557 cataaataaatatttgtataatatatattaattttgaatcaccattt 37009511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 37329876 - 37329922
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  37329876 cataaataaatatttttataatatatattaattttgaaccaccattt 37329922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 14736309 - 14736354
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  14736309 ataaataaatatttttatgatatatactaattttgaaccaccattt 14736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 26618766 - 26618703
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatg 178  Q
    ||||||||||| |||||| ||||||||| || | ||||||||||| || ||||||||||||||||    
T  26618766 tttttaatatcttgttattatcaaaactcaaag-ggtaatgttaaacacattttgttccaacatg 26618703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 18121839 - 18121804
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  18121839 tgcccatctatgaatcttaggacactcatagcacac 18121804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 5114168 - 5114122
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| || ||||||||||||||| ||||||||    
T  5114168 cataaataaatatttttatgatgtatactaattttgaaccaccattt 5114122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 8727262 - 8727216
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||||||||    
T  8727262 cataaataaatatttttatgatacatactaattttgaaccaccattt 8727216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 11564986 - 11564944
Alignment:
Q  37 agcataaatcaatatttttataatatatactaattttgaatca 79  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||    
T  11564986 agcataaataaatatttttattatatataataattttgaatca 11564944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 14742678 - 14742724
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||  ||||||||    
T  14742678 cataaataaatatttttatgatatatactaattttgagccaccattt 14742724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 31364443 - 31364397
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||| ||||||||||| | |||||||||||||||||    
T  31364443 cataaataaatatttgtataatatataatcattttgaatcaccattt 31364397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 31597399 - 31597445
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||| ||||||||||| ||||||||||||| |||||    
T  31597399 cataaataaatatttatataatatatattaattttgaatcatcattt 31597445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 34830926 - 34830972
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||| ||||||||| ||||||||    
T  34830926 cataaataaatatttttatgatatatacaaattttgaaccaccattt 34830972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 35658801 - 35658755
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||| ||||||||||||| ||| ||||    
T  35658801 cataaataaatatttttataatatttactaattttgaagcacgattt 35658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 38911226 - 38911188
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  38911226 aatatttgtataatatatattaattttgaatcaccattt 38911188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 38973032 - 38972986
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| ||||||| |||||||||||    
T  38973032 cataaataaatattcttataatatatattaattttaaatcaccattt 38972986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 41077670 - 41077716
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  41077670 cataaataaatatttttatgatatatattaattttgaaccaccattt 41077716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 43657478 - 43657432
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  43657478 cataaataaatattcttataatatatattaattttgaatcaacattt 43657432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 10356638 - 10356683
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||    
T  10356638 ataaataaatatttttataatatataccaattttgaaccaacattt 10356683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 11052126 - 11052081
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||| ||||||| ||||||||||||| |||||    
T  11052126 ataaataaatatttttatgatatatattaattttgaatcatcattt 11052081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 12950604 - 12950571
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  12950604 cccatctatgaatcttaggacactcatagcacac 12950571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 22298147 - 22298102
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||    
T  22298147 ataaataaatatttttataatatataccaattttgaaacatcattt 22298102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 40020275 - 40020312
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  40020275 cataaataaatatttttatgatatatactaattttgaa 40020312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 21846534 - 21846598
Alignment:
Q  114 tttttaatatcatgttatcatcaaaactt-aaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||| | |||||||||||||| || ||| ||||||| |||| || |||||||||||||||    
T  21846534 tttttaataccttgttatcatcaaaatttcaagatggtaatattaaacacattttgttccaacat 21846598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 27908737 - 27908705
Alignment:
Q  180 ccatctatgaatcttaggacactaatagcacac 212  Q
    ||||||||||||||||||||||| |||||||||    
T  27908737 ccatctatgaatcttaggacactcatagcacac 27908705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 33886834 - 33886790
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  33886834 taaataaatatttttatgatatatattaattttgaaccaccattt 33886790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 18129682 - 18129614
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||| |||||||| | | ||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  18129682 ttgacattttaataccttattatcatcaaagcttaaggtggtaatgttaaacacattttgttccaacat 18129614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 9347656 - 9347723
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| ||||| || | ||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  9347656 ttgacattttagtaccttgttatcatcaaaacttaaggtggtaatgttaaacatattttgttacaaca 9347723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 23739324 - 23739367
Alignment:
Q  42 aaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  23739324 aaataaatatttttataatatatactaattttgaatcaccattt 23739367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 19071887 - 19071933
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19071887 cataaataaatatttttataatatatattaattttgaatcaccattt 19071933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 19119777 - 19119823
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19119777 cataaataaatatttttataatatatattaattttgaatcaccattt 19119823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 29345061 - 29345015
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  29345061 cataaataaatatttttataatatatattaattttgaatcaccattt 29345015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 46683242 - 46683196
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  46683242 cataaataaatatttttataatatatattaattttgaatcaccattt 46683196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 51361998 - 51362044
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  51361998 cataaataaatatttttataatatatactaattttgaatcacgattt 51362044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 16536549 - 16536594
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  16536549 ataaataaatatttttataatatatactaattttgaatcacaattt 16536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 47233225 - 47233270
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  47233225 ataaataaatatttttataatatatattaattttgaatcaccattt 47233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 1386153 - 1386199
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  1386153 cataaataaatattcttataatatatattaattttgaatcaccattt 1386199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 4667440 - 4667394
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||    
T  4667440 cataaataaatatttttagaatatatattaattttgaatcaccattt 4667394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 17109481 - 17109527
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  17109481 cataaataaatatttttataatatatattaattttgaatcacgattt 17109527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 18572102 - 18572148
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  18572102 cataaataaatatttttatgatatatactaattttgaaccaccattt 18572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 25068512 - 25068558
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  25068512 cataaataaatattcttataatatatattaattttgaatcaccattt 25068558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 28971007 - 28971053
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  28971007 cataaataaatatttttatgatatatactaattttgaaccaccattt 28971053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 38011358 - 38011404
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  38011358 cataaataaatattcttataatatatattaattttgaatcaccattt 38011404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 41322081 - 41322035
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  41322081 cataaataaatattcttataatatatattaattttgaatcaccattt 41322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 41574782 - 41574828
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  41574782 cataaataaatatttttataatatatactaatttagaatcacgattt 41574828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Complemental strand, 43320467 - 43320429
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  43320467 aatatttttataatatatattaattttgaatcaccattt 43320429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 44648804 - 44648842
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  44648804 aatatttttataatatatactaattttgaaccaccattt 44648842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 50143561 - 50143607
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  50143561 cataaataaatatttttataacatatattaattttgaatcaccattt 50143607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 16478408 - 16478347
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||| | |||||||||| || |||||||||| |||||||| || ||||||||||||||    
T  16478408 ttttaataccttgttatcatctaagcttaaggtggcaatgttaaacacattttgttccaaca 16478347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 21682860 - 21682811
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaac 175  Q
    |||||||||||||||||||||||  |||||||| || |||||||||||||    
T  21682860 tgttatcatcaaaacttaaggtgacaatgttaaacacattttgttccaac 21682811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 27532087 - 27532132
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  27532087 ataaataaatatttttataatatatattaattttgaaccaccattt 27532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 18735824 - 18735788
Alignment:
Q  176 atgcccatctatgaatcttaggacactaatagcacac 212  Q
    ||||||||||||||||||||||||||| |||||||||    
T  18735824 atgcccatctatgaatcttaggacactcatagcacac 18735788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 26279705 - 26279641
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttcca 173  Q
    |||||||||||||| | | |||||||||||| ||||| |||||| ||||| || |||||||||||    
T  26279705 ttgactttttaataccttattatcatcaaaatttaagatggtaaagttaaacacattttgttcca 26279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 41575738 - 41575694
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||    
T  41575738 taaataaatatttttatgatatatactaattttgaaccaccattt 41575694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 15543587 - 15543552
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  15543587 tgcccatctatgaatcttaggacacttatagcacac 15543552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 16870392 - 16870455
Alignment:
Q  114 tttttaatatcatgttatcatcaaaactt-aaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||| ||||||||||||||||| |||||  ||||| ||| || ||||||||||||||    
T  16870392 tttttaatatcttgttatcatcaaaacttaaaggtaataatggtaaacacattttgttccaaca 16870455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 18516840 - 18516773
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| ||||||||   |||||||||||||| |||| ||||||||||||| |  ||||||||||||||    
T  18516840 ttgacattttaatactttgttatcatcaaaagttaaagtggtaatgttaaactcattttgttccaaca 18516773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 21666436 - 21666401
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  21666436 tgcccatctatgaatcttaggacactcatagcacac 21666401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 21985577 - 21985542
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  21985577 tgcccatctatgaatcttaggacacttatagcacac 21985542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Original strand, 22623416 - 22623451
Alignment:
Q  177 tgcccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||||| |||||||||    
T  22623416 tgcccatctatgaatcttaggacactcatagcacac 22623451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 1846428 - 1846382
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  1846428 cataaataaatattcttataatatatattaattttgaatcatcattt 1846382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 8061594 - 8061548
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  8061594 cataaataaatatttttatgatatatattaattttgaaccaccattt 8061548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 9997926 - 9997880
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  9997926 cataaataaatatttttatgatatatactaattttgaactaccattt 9997880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Original strand, 20909870 - 20909931
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||| | |||||||||||||||| || | ||||||||||| || ||||||||||||||    
T  20909870 tttttaataccttgttatcatcaaaactcaaag-ggtaatgttaaacacattttgttccaaca 20909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 35383490 - 35383444
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||||||||    
T  35383490 cataaataaatatttttatgatatatactatttttgaaccaccattt 35383444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 37419003 - 37419049
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  37419003 cataaataaatatttttatgatatatagtaattttgaaccaccattt 37419049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 44645450 - 44645488
Alignment:
Q  47 aatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  44645450 aatatttttataatatatattaattttgaaccaccattt 44645488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 2819001 - 2818940
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||  |||||||||||||||| || | || |||||||| || ||||||||||||||    
T  2819001 ttttaatattttgttatcatcaaaactcaaagaggcaatgttaaacatattttgttccaaca 2818940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 7307478 - 7307441
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  7307478 cataaataaatatttttatgatatatactaattttgaa 7307441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 14781438 - 14781405
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcacac 212  Q
    |||||||||||||||||||||||| |||||||||    
T  14781438 cccatctatgaatcttaggacactcatagcacac 14781405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 29509989 - 29510034
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||    
T  29509989 ataaataaatatttttataatatataccaattttgaaccatcattt 29510034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 33126751 - 33126714
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  33126751 cataaataaatatttttatgatatatactaattttgaa 33126714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 42831099 - 42831054
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||| |||| |||||| |||||||||||||||||||    
T  42831099 ataaataaatatttgtatattatatattaattttgaatcaccattt 42831054  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 47553703 - 47553662
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcacca 82  Q
    ||||| |||||||||||| ||||||||||||||||| |||||    
T  47553703 taaataaatatttttatattatatactaattttgaaccacca 47553662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 23054777 - 23054829
Alignment:
Q  124 catgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||||||||||| || |||||| ||| || || ||||||||||||||    
T  23054777 catgttatcatcaaaactaaaagtggtattgtcaaacacattttgttccaaca 23054829  T

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Target: scaffold0490 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 7759 - 7826
Alignment:
Q  109 ttgactttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||| |||||||| | |||||||||||||||||||| || ||||||||| || ||||||||||||||    
T  7759 ttgacattttaataccttgttatcatcaaaacttaagatgataatgttaaacacattttgttccaaca 7826  T

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Target: scaffold0683 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 774 - 836
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||| || |||||||||||||||    
T  774 ttttaatttcatgttatcatcaaaacttaagctgaaaatgttaaacaaattttgttccaacat 836  T

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Target: scaffold0201 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 15500 - 15546
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  15500 cataaataaatatttttataatatatattaattttgaatcaccattt 15546  T

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Target: scaffold0388 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 5789 - 5850
Alignment:
Q  115 ttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    |||||||||| |||||||||||||||||||||||  |||||||| || ||||| ||||||||    
T  5789 ttttaatatcttgttatcatcaaaacttaaggtgacaatgttaaacacattttattccaaca 5850  T

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Target: scaffold1192 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1192
Description:

Target: scaffold1192; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 726 - 678
Alignment:
Q  37 agcataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  726 agcataaataaatatttttataacatatattaattttgaatcaccattt 678  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 80
Target Start/End: Complemental strand, 90892 - 90857
Alignment:
Q  45 tcaatatttttataatatatactaattttgaatcac 80  Q
    ||||||||||||||||||||||||||||||||||||    
T  90892 tcaatatttttataatatatactaattttgaatcac 90857  T

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Target: scaffold0289 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 3943 - 3897
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||||    
T  3943 cataaataaatatttttatattatatattaattttgaatcaccattt 3897  T

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Target: scaffold0105 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 19153 - 19199
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  19153 cataaataaatattcttataatatatattaattttgaatcaccattt 19199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 18630 - 18584
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  18630 cataaataaatattcttataatatatattaattttgaatcaccattt 18584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 25394 - 25440
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  25394 cataaataaatatttttatgatatatactaattttgaaccaccattt 25440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 4217 - 4169
Alignment:
Q  39 cataaatcaatatttttataatatatac--taattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  4217 cataaataaatatttttataatatatacattaattttgaatcaccattt 4169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 4237 - 4189
Alignment:
Q  39 cataaatcaatatttttataatatatac--taattttgaatcaccattt 85  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  4237 cataaataaatatttttataatatatacattaattttgaatcaccattt 4189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 33233 - 33188
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||    
T  33233 ataaataaatattcttataatatatattaattttgaatcaccattt 33188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 11527 - 11482
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||    
T  11527 ataaataaatatttttataatatatattaattttgagtcaccattt 11482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 87335 - 87396
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaa-ggtggtaatgttaagcagattttgttccaa 174  Q
    ||||||||| | ||||||||||||||| ||| |||||||||||||| || ||||||||||||    
T  87335 tttttaataccttgttatcatcaaaacctaaaggtggtaatgttaaacacattttgttccaa 87396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 31438 - 31375
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatg 178  Q
    ||||||||| | |||||||||||||||| || | ||||||||| | |||||||||||||||||||    
T  31438 tttttaataacttgttatcatcaaaactcaaag-ggtaatgttgaacagattttgttccaacatg 31375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 25987 - 26033
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  25987 cataaataaatatttttatgatatatattaattttgaaccaccattt 26033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 1571 - 1521
Alignment:
Q  126 tgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaaca 176  Q
    ||||||||||||||| ||||||||||||||||| ||  ||||||| |||||    
T  1571 tgttatcatcaaaacataaggtggtaatgttaaacatgttttgttgcaaca 1521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 67873 - 67918
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||||||| |||||||||||| ||||| ||||||||    
T  67873 ataaataaatatttttatgatatatactaatgttgaaccaccattt 67918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 351445 - 351491
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||||  |||||||||| |||||||||||||||||| ||||||||    
T  351445 cataaatatatatttttatgatatatactaattttgaaccaccattt 351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 377246 - 377182
Alignment:
Q  114 tttttaatatcatgttatcatcaaaa--cttaaggtggtaatgttaagcagattttgttccaacat 177  Q
    ||||||||||| ||||||||||||||  ||||| | ||||||||||| || |||||||||||||||    
T  377246 tttttaatatcttgttatcatcaaaactcttaaag-ggtaatgttaaacacattttgttccaacat 377182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 11155 - 11110
Alignment:
Q  40 ataaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    |||||| ||||||| |||| |||||| |||||||||||||||||||    
T  11155 ataaataaatatttgtatattatatattaattttgaatcaccattt 11110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 185082 - 185045
Alignment:
Q  39 cataaatcaatatttttataatatatactaattttgaa 76  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  185082 cataaataaatatttttatgatatatactaattttgaa 185045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 2401 - 2445
Alignment:
Q  41 taaatcaatatttttataatatatactaattttgaatcaccattt 85  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||    
T  2401 taaataaatatttttatgatatataataattttgaaccaccattt 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 40133 - 40165
Alignment:
Q  179 cccatctatgaatcttaggacactaatagcaca 211  Q
    |||||||||||||||||||||||| ||||||||    
T  40133 cccatctatgaatcttaggacactcatagcaca 40165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 269167 - 269230
Alignment:
Q  114 tttttaatatcatgttatcatcaaaacttaaggtggtaatgttaagcagattttgttccaacatg 178  Q
    ||||||||| | |||||||||||||||| || | | ||||||||| || ||||||||||||||||    
T  269167 tttttaataccttgttatcatcaaaactcaaag-gttaatgttaaacacattttgttccaacatg 269230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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