View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12047_low_2 (Length: 298)

Name: NF12047_low_2
Description: NF12047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12047_low_2
NF12047_low_2
[»] chr4 (38 HSPs)
chr4 (13-275)||(25513653-25513915)
chr4 (1-223)||(26446061-26446283)
chr4 (6-223)||(2424368-2424585)
chr4 (24-223)||(14630991-14631188)
chr4 (24-118)||(16296897-16296991)
chr4 (12-133)||(9638954-9639075)
chr4 (31-127)||(35660906-35661002)
chr4 (12-130)||(33186850-33186968)
chr4 (24-135)||(15239815-15239927)
chr4 (12-130)||(12424277-12424397)
chr4 (24-131)||(9622434-9622542)
chr4 (24-131)||(55583141-55583249)
chr4 (216-285)||(26445871-26445940)
chr4 (216-285)||(2424706-2424775)
chr4 (67-135)||(45314124-45314193)
chr4 (6-135)||(26921490-26921619)
chr4 (20-85)||(13847193-13847258)
chr4 (216-285)||(15747904-15747973)
chr4 (216-272)||(16025937-16025993)
chr4 (65-131)||(14477578-14477644)
chr4 (216-272)||(14630814-14630870)
chr4 (134-221)||(19622093-19622179)
chr4 (18-88)||(10273372-10273442)
chr4 (39-101)||(17142998-17143060)
chr4 (45-101)||(15747793-15747849)
chr4 (216-285)||(17142876-17142942)
chr4 (65-127)||(18462974-18463036)
chr4 (1-130)||(46741147-46741275)
chr4 (140-211)||(19080175-19080245)
chr4 (1-130)||(12623264-12623392)
chr4 (238-270)||(10237422-10237454)
chr4 (67-130)||(19565959-19566022)
chr4 (99-130)||(16296819-16296850)
chr4 (73-131)||(20150771-20150830)
chr4 (12-77)||(19610324-19610389)
chr4 (12-77)||(25091653-25091718)
chr4 (24-77)||(37019670-37019723)
chr4 (13-77)||(53630462-53630526)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-223)||(18129-18351)
[»] chr7 (54 HSPs)
chr7 (1-223)||(43745510-43745732)
chr7 (24-215)||(15575648-15575839)
chr7 (1-223)||(48212703-48212927)
chr7 (24-223)||(47095306-47095505)
chr7 (6-215)||(4690644-4690851)
chr7 (24-223)||(18874664-18874859)
chr7 (24-220)||(20252181-20252381)
chr7 (62-182)||(16186808-16186928)
chr7 (12-127)||(19195562-19195676)
chr7 (24-133)||(708428-708537)
chr7 (12-131)||(58400-58517)
chr7 (20-100)||(8513748-8513828)
chr7 (14-131)||(15700724-15700840)
chr7 (14-87)||(38299738-38299811)
chr7 (20-100)||(8488089-8488169)
chr7 (14-131)||(8930754-8930872)
chr7 (12-130)||(43276731-43276848)
chr7 (14-131)||(25943213-25943330)
chr7 (216-285)||(4690980-4691049)
chr7 (14-131)||(13744499-13744614)
chr7 (216-285)||(43745320-43745389)
chr7 (216-285)||(831981-832050)
chr7 (216-285)||(1197161-1197230)
chr7 (216-285)||(34958196-34958265)
chr7 (216-275)||(47095126-47095185)
chr7 (24-131)||(33556104-33556211)
chr7 (25-131)||(15720724-15720831)
chr7 (216-285)||(48213032-48213101)
chr7 (24-131)||(36300640-36300745)
chr7 (17-88)||(13315074-13315145)
chr7 (24-131)||(18570592-18570700)
chr7 (12-82)||(19283051-19283121)
chr7 (24-88)||(16250221-16250285)
chr7 (24-78)||(3287743-3287797)
chr7 (216-270)||(18079617-18079671)
chr7 (65-127)||(42565872-42565934)
chr7 (125-208)||(16368271-16368354)
chr7 (42-101)||(34958321-34958380)
chr7 (46-101)||(831871-831926)
chr7 (46-101)||(1197051-1197106)
chr7 (12-77)||(12127150-12127215)
chr7 (73-133)||(16496154-16496215)
chr7 (12-77)||(44374843-44374908)
chr7 (12-77)||(44383708-44383773)
chr7 (67-130)||(9743120-9743183)
chr7 (29-93)||(15700887-15700951)
chr7 (73-130)||(15119354-15119411)
chr7 (12-77)||(8851146-8851211)
chr7 (12-77)||(11067468-11067533)
chr7 (12-77)||(12372274-12372339)
chr7 (12-77)||(12465247-12465312)
chr7 (12-77)||(32433576-32433641)
chr7 (67-130)||(14160897-14160960)
chr7 (67-130)||(14318020-14318083)
[»] chr8 (41 HSPs)
chr8 (1-223)||(21514545-21514767)
chr8 (25-223)||(18816295-18816493)
chr8 (1-223)||(4380593-4380807)
chr8 (1-127)||(36732388-36732514)
chr8 (12-130)||(22208216-22208334)
chr8 (24-130)||(12577826-12577932)
chr8 (24-131)||(21399662-21399770)
chr8 (24-138)||(21676592-21676704)
chr8 (24-131)||(21794155-21794263)
chr8 (12-121)||(22258293-22258403)
chr8 (12-131)||(18834371-18834487)
chr8 (216-285)||(38185044-38185113)
chr8 (24-127)||(21678845-21678946)
chr8 (216-285)||(18023653-18023722)
chr8 (216-285)||(20494632-20494701)
chr8 (29-88)||(22483775-22483834)
chr8 (14-88)||(22345153-22345227)
chr8 (14-88)||(22356813-22356887)
chr8 (216-273)||(21514367-21514424)
chr8 (24-112)||(21676499-21676585)
chr8 (24-131)||(22610266-22610371)
chr8 (15-131)||(23884116-23884231)
chr8 (42-101)||(18023573-18023632)
chr8 (12-87)||(36305988-36306062)
chr8 (42-97)||(38184929-38184984)
chr8 (1-55)||(5761555-5761609)
chr8 (45-103)||(22483912-22483970)
chr8 (216-270)||(22366072-22366123)
chr8 (12-130)||(21579193-21579310)
chr8 (1-130)||(17978392-17978520)
chr8 (67-130)||(22474704-22474767)
chr8 (67-121)||(12037205-12037260)
chr8 (73-131)||(22966756-22966815)
chr8 (67-121)||(29762909-29762964)
chr8 (12-78)||(20022027-20022093)
chr8 (216-270)||(22723251-22723305)
chr8 (19-77)||(39694271-39694329)
chr8 (75-131)||(21697509-21697566)
chr8 (20-77)||(23889799-23889856)
chr8 (238-270)||(24907883-24907915)
chr8 (67-130)||(41680174-41680237)
[»] chr5 (24 HSPs)
chr5 (1-223)||(660644-660864)
chr5 (12-223)||(23199194-23199405)
chr5 (24-186)||(18744765-18744927)
chr5 (29-223)||(1627071-1627266)
chr5 (24-127)||(16063701-16063804)
chr5 (24-127)||(6551289-6551392)
chr5 (12-131)||(21398631-21398752)
chr5 (12-131)||(32607303-32607423)
chr5 (216-285)||(1627387-1627456)
chr5 (216-272)||(18744558-18744614)
chr5 (70-136)||(21504081-21504147)
chr5 (1-100)||(1626894-1626992)
chr5 (1-131)||(26749978-26750107)
chr5 (1-100)||(14025783-14025881)
chr5 (24-126)||(20313226-20313328)
chr5 (236-275)||(660467-660506)
chr5 (73-131)||(24068175-24068234)
chr5 (1-130)||(8833182-8833310)
chr5 (63-129)||(21398833-21398904)
chr5 (16-77)||(31622117-31622178)
chr5 (13-77)||(21300032-21300096)
chr5 (99-131)||(22111923-22111955)
chr5 (67-130)||(26762350-26762413)
chr5 (73-133)||(36315305-36315366)
[»] chr1 (36 HSPs)
chr1 (15-221)||(28476724-28476930)
chr1 (1-223)||(24719487-24719708)
chr1 (14-185)||(12710759-12710930)
chr1 (24-133)||(38056671-38056780)
chr1 (24-108)||(50544841-50544925)
chr1 (12-130)||(24007212-24007330)
chr1 (23-133)||(8275987-8276097)
chr1 (12-130)||(8306552-8306671)
chr1 (25-111)||(22145666-22145752)
chr1 (24-131)||(34392713-34392821)
chr1 (14-88)||(17901783-17901857)
chr1 (216-275)||(28477053-28477112)
chr1 (12-131)||(20588581-20588703)
chr1 (12-131)||(20593119-20593241)
chr1 (65-130)||(39061268-39061333)
chr1 (14-131)||(45499487-45499605)
chr1 (14-103)||(6834150-6834239)
chr1 (24-85)||(635003-635064)
chr1 (1-100)||(14792539-14792637)
chr1 (14-88)||(35895088-35895162)
chr1 (1-121)||(18121559-18121679)
chr1 (15-130)||(20708049-20708163)
chr1 (73-131)||(40390096-40390155)
chr1 (65-127)||(21188073-21188135)
chr1 (73-133)||(14294858-14294919)
chr1 (126-182)||(41931146-41931202)
chr1 (73-133)||(51131317-51131378)
chr1 (25-88)||(16401902-16401963)
chr1 (8-130)||(38887070-38887191)
chr1 (1-100)||(44892427-44892525)
chr1 (216-250)||(20822729-20822763)
chr1 (12-77)||(16058301-16058366)
chr1 (12-77)||(19676711-19676776)
chr1 (12-77)||(21046036-21046101)
chr1 (67-100)||(21243799-21243832)
chr1 (242-270)||(20822698-20822726)
[»] scaffold0878 (2 HSPs)
scaffold0878 (14-223)||(3411-3620)
scaffold0878 (216-285)||(3741-3810)
[»] chr2 (19 HSPs)
chr2 (24-223)||(21315475-21315674)
chr2 (24-223)||(21335265-21335464)
chr2 (12-223)||(21369147-21369358)
chr2 (1-223)||(23610474-23610702)
chr2 (12-130)||(149488-149610)
chr2 (67-135)||(28652593-28652662)
chr2 (24-131)||(28344987-28345092)
chr2 (14-88)||(23801485-23801559)
chr2 (65-130)||(25584302-25584367)
chr2 (24-131)||(34491239-34491350)
chr2 (65-131)||(19647180-19647246)
chr2 (1-77)||(19201176-19201252)
chr2 (24-127)||(20005970-20006072)
chr2 (65-127)||(45535876-45535938)
chr2 (12-77)||(17307486-17307551)
chr2 (99-131)||(25584186-25584218)
chr2 (24-126)||(36734450-36734552)
chr2 (12-77)||(24780827-24780892)
chr2 (241-270)||(29114431-29114460)
[»] chr6 (26 HSPs)
chr6 (10-223)||(20410497-20410708)
chr6 (122-285)||(21686158-21686321)
chr6 (23-160)||(15998806-15998943)
chr6 (1-122)||(21683051-21683171)
chr6 (12-115)||(19825473-19825576)
chr6 (24-133)||(18982515-18982625)
chr6 (14-131)||(10446162-10446280)
chr6 (24-121)||(23658044-23658142)
chr6 (14-125)||(34140445-34140554)
chr6 (14-125)||(34153061-34153170)
chr6 (14-88)||(29045260-29045334)
chr6 (24-131)||(1818899-1819005)
chr6 (65-127)||(24506155-24506217)
chr6 (1-130)||(7217220-7217347)
chr6 (67-135)||(25601371-25601437)
chr6 (1-121)||(22557204-22557323)
chr6 (70-130)||(18982362-18982422)
chr6 (1-100)||(18455049-18455147)
chr6 (67-130)||(31734655-31734718)
chr6 (12-77)||(7827972-7828037)
chr6 (16-101)||(13285724-13285809)
chr6 (12-77)||(19655218-19655283)
chr6 (12-77)||(23150274-23150339)
chr6 (24-77)||(27329980-27330033)
chr6 (24-77)||(27390720-27390773)
chr6 (67-130)||(23431488-23431551)
[»] chr3 (50 HSPs)
chr3 (24-223)||(14520300-14520499)
chr3 (24-223)||(17208378-17208577)
chr3 (1-223)||(24547054-24547276)
chr3 (1-223)||(24548930-24549149)
chr3 (12-133)||(14641535-14641656)
chr3 (14-133)||(29907582-29907702)
chr3 (14-133)||(29948748-29948868)
chr3 (14-133)||(29997902-29998022)
chr3 (20-130)||(14152394-14152504)
chr3 (12-131)||(6159350-6159470)
chr3 (24-131)||(22841278-22841390)
chr3 (25-131)||(54875474-54875581)
chr3 (24-131)||(3527156-3527261)
chr3 (24-131)||(2841505-2841613)
chr3 (24-131)||(6156656-6156763)
chr3 (216-285)||(2247998-2248067)
chr3 (25-131)||(17684835-17684942)
chr3 (12-135)||(50350803-50350928)
chr3 (25-130)||(5215594-5215699)
chr3 (24-131)||(14442120-14442228)
chr3 (25-131)||(17669698-17669805)
chr3 (216-273)||(24546876-24546933)
chr3 (32-103)||(45803338-45803409)
chr3 (12-100)||(15566721-15566809)
chr3 (42-101)||(2247883-2247942)
chr3 (65-136)||(21845691-21845762)
chr3 (216-271)||(24549270-24549325)
chr3 (45-130)||(50755274-50755360)
chr3 (24-127)||(3160626-3160728)
chr3 (24-103)||(12917305-12917384)
chr3 (65-131)||(48631278-48631344)
chr3 (86-127)||(13520408-13520449)
chr3 (15-130)||(6003133-6003247)
chr3 (228-270)||(25104106-25104148)
chr3 (24-136)||(25202075-25202187)
chr3 (67-130)||(53646100-53646163)
chr3 (67-130)||(54330348-54330411)
chr3 (1-78)||(11563724-11563801)
chr3 (90-131)||(12155089-12155130)
chr3 (12-77)||(17044966-17045031)
chr3 (12-77)||(17047126-17047191)
chr3 (12-77)||(17518860-17518925)
chr3 (12-77)||(17533722-17533787)
chr3 (12-77)||(22306570-22306635)
chr3 (12-77)||(49900730-49900795)
chr3 (71-131)||(12150993-12151053)
chr3 (99-131)||(13522353-13522385)
chr3 (20-88)||(16050916-16050984)
chr3 (13-77)||(17541434-17541498)
chr3 (24-88)||(48043477-48043539)
[»] scaffold0369 (2 HSPs)
scaffold0369 (14-223)||(15605-15813)
scaffold0369 (216-285)||(15934-16003)
[»] scaffold1186 (2 HSPs)
scaffold1186 (24-223)||(1876-2073)
scaffold1186 (216-272)||(1699-1755)
[»] scaffold0005 (2 HSPs)
scaffold0005 (24-223)||(186195-186392)
scaffold0005 (216-272)||(186513-186569)
[»] scaffold0516 (2 HSPs)
scaffold0516 (1-208)||(5281-5488)
scaffold0516 (1-37)||(5184-5220)
[»] scaffold0231 (1 HSPs)
scaffold0231 (24-223)||(17520-17719)
[»] scaffold0203 (1 HSPs)
scaffold0203 (12-222)||(17927-18137)
[»] scaffold0853 (1 HSPs)
scaffold0853 (16-223)||(2445-2652)
[»] scaffold0032 (1 HSPs)
scaffold0032 (12-222)||(61835-62048)
[»] scaffold0162 (1 HSPs)
scaffold0162 (75-223)||(23932-24080)
[»] scaffold0414 (1 HSPs)
scaffold0414 (12-223)||(11147-11359)
[»] scaffold0676 (2 HSPs)
scaffold0676 (13-127)||(2831-2945)
scaffold0676 (65-130)||(2762-2828)
[»] scaffold0247 (1 HSPs)
scaffold0247 (25-131)||(1022-1128)
[»] scaffold0061 (2 HSPs)
scaffold0061 (14-127)||(14575-14689)
scaffold0061 (14-127)||(23633-23747)
[»] scaffold0505 (1 HSPs)
scaffold0505 (14-135)||(4878-4999)
[»] scaffold0007 (4 HSPs)
scaffold0007 (24-133)||(16418-16528)
scaffold0007 (24-133)||(18700-18811)
scaffold0007 (70-130)||(18902-18962)
scaffold0007 (70-130)||(16619-16679)
[»] scaffold0220 (1 HSPs)
scaffold0220 (24-133)||(13893-14002)
[»] scaffold1256 (1 HSPs)
scaffold1256 (1-112)||(2176-2287)
[»] scaffold0328 (1 HSPs)
scaffold0328 (12-133)||(18627-18749)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-135)||(26669-26803)
scaffold0017 (65-127)||(23564-23626)
[»] scaffold0213 (2 HSPs)
scaffold0213 (12-130)||(19154-19272)
scaffold0213 (78-123)||(19115-19160)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-131)||(8722-8853)
[»] scaffold0431 (1 HSPs)
scaffold0431 (12-130)||(5578-5698)
[»] scaffold0174 (3 HSPs)
scaffold0174 (12-131)||(19801-19921)
scaffold0174 (14-86)||(5445-5517)
scaffold0174 (12-103)||(11590-11681)
[»] scaffold0379 (1 HSPs)
scaffold0379 (13-131)||(10893-11011)
[»] scaffold0031 (1 HSPs)
scaffold0031 (14-131)||(127332-127450)
[»] scaffold0298 (2 HSPs)
scaffold0298 (216-285)||(236-305)
scaffold0298 (42-101)||(361-420)
[»] scaffold0594 (1 HSPs)
scaffold0594 (24-103)||(2221-2300)
[»] scaffold0125 (1 HSPs)
scaffold0125 (65-135)||(28493-28564)
[»] scaffold0098 (1 HSPs)
scaffold0098 (24-131)||(40052-40160)
[»] scaffold0004 (5 HSPs)
scaffold0004 (14-103)||(66061-66150)
scaffold0004 (16-128)||(75885-75998)
scaffold0004 (24-93)||(111344-111413)
scaffold0004 (16-131)||(73032-73148)
scaffold0004 (1-55)||(328264-328318)
[»] scaffold0139 (2 HSPs)
scaffold0139 (24-108)||(23503-23587)
scaffold0139 (66-130)||(40204-40268)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-135)||(6396-6529)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-100)||(6395-6494)
[»] scaffold0058 (1 HSPs)
scaffold0058 (65-127)||(59695-59757)
[»] scaffold0180 (2 HSPs)
scaffold0180 (216-285)||(10447-10516)
scaffold0180 (42-101)||(10572-10630)
[»] scaffold0092 (1 HSPs)
scaffold0092 (24-127)||(38441-38543)
[»] scaffold0086 (3 HSPs)
scaffold0086 (24-103)||(35185-35264)
scaffold0086 (29-136)||(35490-35597)
scaffold0086 (29-103)||(35341-35413)
[»] scaffold0337 (1 HSPs)
scaffold0337 (24-127)||(3155-3257)
[»] scaffold0730 (1 HSPs)
scaffold0730 (14-88)||(6494-6568)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-130)||(293-421)
[»] scaffold0035 (1 HSPs)
scaffold0035 (24-136)||(43786-43898)
[»] scaffold0439 (2 HSPs)
scaffold0439 (6-130)||(4369-4492)
scaffold0439 (99-131)||(12256-12288)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-97)||(9904-9999)
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-100)||(8799-8897)
[»] scaffold0394 (1 HSPs)
scaffold0394 (24-127)||(7513-7615)
[»] scaffold0217 (1 HSPs)
scaffold0217 (65-131)||(28660-28726)
[»] scaffold0021 (2 HSPs)
scaffold0021 (65-127)||(17057-17118)
scaffold0021 (65-127)||(26588-26649)
[»] scaffold1939 (1 HSPs)
scaffold1939 (70-131)||(74-135)
[»] scaffold0462 (2 HSPs)
scaffold0462 (81-130)||(1264-1313)
scaffold0462 (81-130)||(6770-6819)
[»] scaffold0205 (1 HSPs)
scaffold0205 (24-127)||(5615-5718)
[»] scaffold0148 (1 HSPs)
scaffold0148 (14-78)||(8843-8907)
[»] scaffold0048 (1 HSPs)
scaffold0048 (24-88)||(68725-68789)
[»] scaffold0184 (1 HSPs)
scaffold0184 (73-133)||(377-438)
[»] scaffold0183 (1 HSPs)
scaffold0183 (134-223)||(11227-11316)
[»] scaffold0111 (1 HSPs)
scaffold0111 (12-77)||(12520-12585)
[»] scaffold0059 (1 HSPs)
scaffold0059 (66-127)||(49680-49741)
[»] scaffold0001 (3 HSPs)
scaffold0001 (12-77)||(31994-32059)
scaffold0001 (12-77)||(37301-37366)
scaffold0001 (13-77)||(77687-77751)
[»] scaffold0020 (2 HSPs)
scaffold0020 (67-130)||(174169-174232)
scaffold0020 (25-77)||(143611-143663)
[»] scaffold1800 (1 HSPs)
scaffold1800 (24-127)||(558-660)
[»] scaffold0461 (1 HSPs)
scaffold0461 (99-130)||(12433-12464)
[»] scaffold0120 (1 HSPs)
scaffold0120 (73-131)||(29257-29316)
[»] scaffold0165 (1 HSPs)
scaffold0165 (69-127)||(31880-31938)
[»] scaffold1633 (1 HSPs)
scaffold1633 (12-77)||(1205-1270)
[»] scaffold0956 (1 HSPs)
scaffold0956 (12-77)||(2555-2620)
[»] scaffold0112 (2 HSPs)
scaffold0112 (24-77)||(2889-2942)
scaffold0112 (130-211)||(13406-13488)
[»] scaffold0047 (1 HSPs)
scaffold0047 (12-77)||(79049-79114)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-77)||(78172-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-77)||(24118-24183)
[»] scaffold1283 (1 HSPs)
scaffold1283 (13-77)||(456-520)
[»] scaffold0630 (1 HSPs)
scaffold0630 (67-130)||(9011-9074)
[»] scaffold0371 (1 HSPs)
scaffold0371 (67-130)||(10487-10550)
[»] scaffold0145 (1 HSPs)
scaffold0145 (73-116)||(8085-8129)
[»] scaffold0063 (1 HSPs)
scaffold0063 (67-130)||(62666-62729)


Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 25513915 - 25513653
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 112  Q
    |||||||||| ||||||||| |||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25513915 gatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgat 25513816  T
Q  113 gttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtgg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25513815 gttatagaaattagggttagatttcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtgg 25513716  T
Q  213 attaaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgt 275  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25513715 attaaattggtgaagtataatgttgttgttgatgaattcacttctgattgatgttgtttttgt 25513653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 26446283 - 26446061
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  26446283 gtagaaccttgcgatcatctaacctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgtt 26446184  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26446183 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatatctttttctacttctacccataagtgcctatttgtataaag 26446084  T
Q  201 tgattattgtggattaaattggt 223  Q
    |||||| |||||||| |||||||    
T  26446083 tgattactgtggatttaattggt 26446061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 2424368 - 2424585
Alignment:
Q  6 accttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag 105  Q
    |||||||||||||||||||||||||||||||| || || |||||||||||  |  ||||||||||| ||||||||||||||| |||||||||||| ||||    
T  2424368 accttgcgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaatcttgtagttgttattag 2424467  T
Q  106 ttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgatt 205  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  2424468 ttttgatgttatagaaattagggttcgatttcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgatt 2424567  T
Q  206 attgtggattaaattggt 223  Q
    |||||||||| |||||||    
T  2424568 attgtggatttaattggt 2424585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 14631188 - 14630991
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14631188 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 14631089  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  14631088 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 14630991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 16296991 - 16296897
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttata 118  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16296991 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgttata 16296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 9639075 - 9638954
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    |||| |||||| |||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  9639075 cgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgataattttga 9638976  T
Q  112 tgttatagaaattagggttaga 133  Q
    |||| | | ||||||| |||||    
T  9638975 tgttttgggaattaggtttaga 9638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 35661002 - 35660906
Alignment:
Q  31 aagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgttagttttgatgttatatgaattagg 35660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 33186968 - 33186850
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 110  Q
    |||||||||||  ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||    
T  33186968 cgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtggttgttaataggttttg 33186869  T
Q  111 atgttatagaaattagggtt 130  Q
    ||||| ||| ||||||||||    
T  33186868 atgttgtag-aattagggtt 33186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 15239815 - 15239927
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaacc-ttgtagttgttgttagttttgatgttatagaaa 122  Q
    |||||||||||||| || ||||||||||||||||||  |||||||| ||||||||||||||||||| || ||||||| ||| ||||||| |||||||| |    
T  15239815 ctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaacctttatagttgtcgttggttttgaggttatagaga 15239914  T
Q  123 ttagggttagatt 135  Q
    |||||||||||||    
T  15239915 ttagggttagatt 15239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 12424277 - 12424397
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctg--aaaaagggtttaaccttgtagttgttgtta-gttt 108  Q
    |||||||||||  ||||||||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||  || ||||    
T  12424277 cgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttt 12424376  T
Q  109 tgatgttatagaaattagggtt 130  Q
    ||||||| ||| ||||||||||    
T  12424377 tgatgttgtag-aattagggtt 12424397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 9622542 - 9622434
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||||||||||||||||||| | ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  9622542 ctaaggtaagggtgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 9622444  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  9622443 attagggtta 9622434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 55583249 - 55583141
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||| | |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  55583249 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattataaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 55583151  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  55583150 attagggtta 55583141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 26445940 - 26445871
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  26445940 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 26445871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 2424706 - 2424775
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  2424706 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgttatgagatgt 2424775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 45314124 - 45314193
Alignment:
Q  67 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 135  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  45314124 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgttatagagattagggttagatt 45314193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 26921490 - 26921619
Alignment:
Q  6 accttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaacctt-gtagttgttgtta 104  Q
    |||||| ||||||||||||||||||||||||  || || | |||  |||| ||  ||  | |||||||||||||||||||||| || |||||||||||||    
T  26921490 accttgtgatcatctaacctaaggtaagggtaggactaaccttcattaatcataagta-tgtaattctgaaaaagggtttaacatttgtagttgttgtta 26921588  T
Q  105 gttttgatgttatagaaattagggttagatt 135  Q
    |||||||||| ||||| ||||||||||||||    
T  26921589 gttttgatgtcatagagattagggttagatt 26921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 13847258 - 13847193
Alignment:
Q  20 taacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggttt 85  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||    
T  13847258 taacctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 15747904 - 15747973
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  15747904 aaattggtgaagtataatgttgatgttgatgacttcacttctgattgttgttgtttttgttatgagatgt 15747973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 16025937 - 16025993
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 272  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16025937 aaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttt 16025993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 14477644 - 14477578
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||| |||||||||    
T  14477644 tataattctgaaaaagggtttgatcttgtagtcgttgatagttttgatgttatagaagttagggtta 14477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 14630870 - 14630814
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 272  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  14630870 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 14630814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 19622093 - 19622179
Alignment:
Q  134 tttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 221  Q
    ||||||||||||||||||||||| ||||||||||| |||  | |||||||||  ||||||||||||||||||||| || ||| |||||    
T  19622093 tttcattcataatcttttgtata-tctctttttcttcttaaatccataagtgtttatttgtataaagtgattattatgaatttaattg 19622179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 10273442 - 10273372
Alignment:
Q  18 tctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||| ||||    
T  10273442 tctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataac 10273372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 17143060 - 17142998
Alignment:
Q  39 gaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||| ||||||||||||    
T  17143060 gaatagctttctctaaagatgagttgtataattctgaaaaggggtttaacattgtagttgttg 17142998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 15747793 - 15747849
Alignment:
Q  45 ctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    ||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||    
T  15747793 ctttctctaaagatgagttgtataattctgaaaaagggtttaacattgtagttgttg 15747849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 17142942 - 17142876
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||   ||||| |||||||||||||||||||||||||| ||| |||||    
T  17142942 aaattggtgaagtataatgttgttg---atgaactcacttctgattgttgttgtttttgttatgagatgt 17142876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 18463036 - 18462974
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||||||||| || |||||    
T  18463036 tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttataaaagttagg 18462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 46741275 - 46741147
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||| ||| || || | |||| |||| ||   |  | |||| |||||||||||||||||||||||||||||    
T  46741275 gtagaaccttgcgatcatctaacctaaggtaagtgtgggactaaccttctttaatcataaata-tgtaatcctgaaaaagggtttaaccttgtagttgtt 46741177  T
Q  101 -gttagttttgatgttatagaaattagggtt 130  Q
      || ||||||||||| ||| ||||||||||    
T  46741176 aattggttttgatgttgtag-aattagggtt 46741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 19080175 - 19080245
Alignment:
Q  140 tcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 211  Q
    ||||||||| |||||||||||||||| ||||||  |||||||||||| || ||||  |||||||||||||||    
T  19080175 tcataatctcttgtataatctctttt-ctacttaaacccataagtgcttaattgtgcaaagtgattattgtg 19080245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 12623392 - 12623264
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||   || |||||||||||||| || || | |||| |||| || |||  | |||| |||||||||||||||||||||||||||||    
T  12623392 gtagaaccttgcgatcaatcaatctaaggtaagggtgggactaaccttctttaatcataggta-tgtaatcctgaaaaagggtttaaccttgtagttgtt 12623294  T
Q  101 gtta-gttttgatgttatagaaattagggtt 130  Q
      || ||||||||||| ||| ||||||||||    
T  12623293 aataggttttgatgttgtag-aattagggtt 12623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 10237422 - 10237454
Alignment:
Q  238 ttgttgatgaattcacttctgattgttgttgtt 270  Q
    |||||||||||||||||||||||||||||||||    
T  10237422 ttgttgatgaattcacttctgattgttgttgtt 10237454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 19565959 - 19566022
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  19565959 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 19566022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 16296850 - 16296819
Alignment:
Q  99 ttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||||||||||||||||||||||||    
T  16296850 ttgttagttttgatgttatagaaattagggtt 16296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 20150830 - 20150771
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 131  Q
    ||||||||| ||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  20150830 tgaaaaaggatttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 20150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 19610389 - 19610324
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  19610389 cgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaa 19610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 25091718 - 25091653
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  25091718 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 37019723 - 37019670
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||||||||| || |||||||||||  |  |||||||||||||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaa 37019670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 53630462 - 53630526
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  53630462 gatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 18351 - 18129
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18351 gtagaaccttgcgatcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 18252  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||     
T  18251 gttggttttgattttatagaaattagggttagatttcattcataatcttctgtataatctctttttctacttctacccataagtgcttatttgtataaaa 18152  T
Q  201 tgattattgtggattaaattggt 223  Q
    ||||||||||||||| |||||||    
T  18151 tgattattgtggatttaattggt 18129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 43745732 - 43745510
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  43745732 gtagaaccttgcgatcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgtt 43745633  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43745632 gttagttttgatgttatagaaattagagttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaag 43745533  T
Q  201 tgattattgtggattaaattggt 223  Q
    ||||||||||||||| |||||||    
T  43745532 tgattattgtggatttaattggt 43745510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 15575648 - 15575839
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15575648 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgttatagaaat 15575747  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15575748 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgtggatt 15575839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 48212703 - 48212927
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaa--gggtttaaccttgtagttg 98  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||||| |||||  ||||||||| ||||| |||    
T  48212703 gtagaaccttgcgatcatctaacctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattg 48212802  T
Q  99 ttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  48212803 ttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccaaaagtgtctatttgtataa 48212902  T
Q  199 agtgattattgtggattaaattggt 223  Q
    ||||||||||||||||| |||||||    
T  48212903 agtgattattgtggatttaattggt 48212927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 47095505 - 47095306
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  47095505 ctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgttatagaaat 47095406  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  47095405 tagggttaaatttcattcataatcttttgtataaactctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 47095306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 4690644 - 4690851
Alignment:
Q  6 accttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag 105  Q
    ||||||||||||||||||||||||||| |||| || || |||||||||||  |  |||||||||||||||||||||||||||||||||||||||| |||     
T  4690644 accttgcgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattac 4690743  T
Q  106 ttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgatt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||    
T  4690744 ttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctcattttctacttctacccataagt--ctatttgtataaagtgatt 4690841  T
Q  206 attgtggatt 215  Q
    ||| ||||||    
T  4690842 attatggatt 4690851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 18874664 - 18874859
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaa--gggtttaaccttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |   ||||||||||||||||||    
T  18874664 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaaaggggtttaaccttgtagttggt---agttttgatgttatagaa 18874760  T
Q  122 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  18874761 attagggttagatttcattcataatcttttgtataatctcttttt---cttctacccataagtgcctatttgtataaagtgattattgtggatttaattg 18874857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 20252181 - 20252381
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  20252181 ctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgttatagaaat 20252280  T
Q  124 tagggttagat----ttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaat 219  Q
    |||| ||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  20252281 taggattagatttcattcattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaat 20252380  T
Q  220 t 220  Q
    |    
T  20252381 t 20252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 16186928 - 16186808
Alignment:
Q  62 ttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctc 161  Q
    |||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16186928 ttgtataattctgaaaaagggtttaaccttatggttgttagtagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctc 16186829  T
Q  162 tttttctacttctacccataa 182  Q
    ||||||| |||||||||||||    
T  16186828 tttttcttcttctacccataa 16186808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 19195676 - 19195562
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19195676 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctg-aaaagggtttaaccttgtagttgttgttagttttga 19195578  T
Q  112 tgttatagaaattagg 127  Q
    |||||||| |||||||    
T  19195577 tgttataggaattagg 19195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 708428 - 708537
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  708428 ctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgttataggaat 708527  T
Q  124 tagggttaga 133  Q
    |||| |||||    
T  708528 taggtttaga 708537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 58400 - 58517
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||| | ||| ||| |||||||||||||    
T  58400 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagttttga 58497  T
Q  112 tgttatagaaattagggtta 131  Q
    ||||| ||||||||||||||    
T  58498 tgttaaagaaattagggtta 58517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 8513748 - 8513828
Alignment:
Q  20 taacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8513748 taacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 15700724 - 15700840
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||| ||| ||||||||||| ||  | ||||||||||||||||||||||||||  |||| |||| ||||||||| | |||||||||||||||||| |||    
T  15700724 atcatataatctaaggtaaggatgatactagctttctctaataatgggttgtatggttctaaaaaggggtttaacat-gtagttgttgttagttttaatg 15700822  T
Q  114 ttatagaaattagggtta 131  Q
    ||||||||||||||||||    
T  15700823 ttatagaaattagggtta 15700840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 38299811 - 38299738
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaa 87  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  38299811 atcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 8488089 - 8488169
Alignment:
Q  20 taacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8488089 taacctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttatagttgtt 8488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 8930754 - 8930872
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttga 111  Q
    ||||||||| |||||||||||||| || ||  |||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||    
T  8930754 atcatctaatctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttga 8930852  T
Q  112 tgttatagaaattagggtta 131  Q
    ||||||||||||||||||||    
T  8930853 tgttatagaaattagggtta 8930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 43276731 - 43276848
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 110  Q
    |||||||||||  ||||||||||||| || || |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||  || ||||||    
T  43276731 cgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctg-aaaatggtttaaccttgtagttgttaataggttttg 43276829  T
Q  111 atgttatagaaattagggtt 130  Q
    ||||| ||| ||||||||||    
T  43276830 atgttgtag-aattagggtt 43276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 25943330 - 25943213
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgt-tagttttgat 112  Q
    |||||||||  ||||||||||||| || ||||||||||||||||||||||||||  || |||||| ||||||||| || | |||||| | ||||||||||    
T  25943330 atcatctaatataaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaacatt-tcgttgttttgtagttttgat 25943232  T
Q  113 gttatagaaattagggtta 131  Q
    |||||||||||||||||||    
T  25943231 gttatagaaattagggtta 25943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 4690980 - 4691049
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  4690980 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 4691049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 13744499 - 13744614
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||| ||| ||||| |||| |||||||| | ||| ||| |||||| |||| |||    
T  13744499 atcatctaatctaaggtaagggtgggactagctttctctaataatgggttttatgattctaaaaaggggtttaa-catgttgtt-ttgttatttttaatg 13744596  T
Q  114 ttatagaaattagggtta 131  Q
    ||||||||||||||||||    
T  13744597 ttatagaaattagggtta 13744614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 43745389 - 43745320
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  43745389 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 43745320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 831981 - 832050
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  831981 aaatgggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 832050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 1197161 - 1197230
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  1197161 aaatgggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 1197230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 34958265 - 34958196
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  34958265 aaattggtgaagtataatgttgttgttgatgaattcacttttgattgttgttgtttttgttatgagatgt 34958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 47095185 - 47095126
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgt 275  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47095185 aaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttttgt 47095126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 33556104 - 33556211
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    ||||| |||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| ||||||| |||||||||||||||    
T  33556104 ctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttag-tttgatgttatagaa 33556201  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  33556202 attagggtta 33556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 15720831 - 15720724
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaa 122  Q
    |||||||| |||| || ||||||||||| |||||||||||||| ||||| |||| |||||||||   |||| ||| ||||||||||||||||||||||||    
T  15720831 taaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 15720733  T
Q  123 ttagggtta 131  Q
    ||| |||||    
T  15720732 ttatggtta 15720724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 48213032 - 48213101
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  48213032 aaattgatgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttttgttatgagatgt 48213101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 36300640 - 36300745
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    ||||||||| |||| || |||||||||||||||||||||||||| ||||| |||| ||||||||| |  ||  | ||||||||||||||| ||||| |||    
T  36300640 ctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgtta--ttttgttagttttgatgatataggaat 36300737  T
Q  124 tagggtta 131  Q
    ||||||||    
T  36300738 tagggtta 36300745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 13315074 - 13315145
Alignment:
Q  17 atctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    |||||| |||||||||||||| || || ||||||||||||||||||||||| |||||||||| |||||||||    
T  13315074 atctaatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaac 13315145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 18570700 - 18570592
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||||||||||||||||||||  |||||  ||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  18570700 ctaaggtaagggtgagactagctttctctaataatgggttgtaagattctagaaaggggtttaacatattgttgtt-ttgttagttttgatgttatagaa 18570602  T
Q  122 attagggtta 131  Q
     ||| |||||    
T  18570601 gttatggtta 18570592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 19283121 - 19283051
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaaggg 82  Q
    |||||||||||  ||||||||||||| || || |||||||||| |||||||||||||||||||||||||||    
T  19283121 cgatcatctaatttaaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 16250221 - 16250285
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    |||||||||||||| || || ||||||||||||||| ||||||||||| ||||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaac 16250285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 3287797 - 3287743
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaa 78  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||||    
T  3287797 ctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 18079617 - 18079671
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtt 270  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||    
T  18079617 aaattggtgaaatataatgttattgttgatgaattcacttctgattgttgttgtt 18079671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 42565872 - 42565934
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||| |||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgataattttgttgttatagaagttagg 42565934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 16368271 - 16368354
Alignment:
Q  125 agggttagatttcattcataatctt-ttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattatt 208  Q
    |||||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||||| || ||||  ||| ||||||||    
T  16368271 agggttagttttcattcataatcttcttgtataatctatttt-ctacttctacccataagtgcttaattgtgcaaattgattatt 16368354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 34958380 - 34958321
Alignment:
Q  42 tagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||| ||||||||||||    
T  34958380 tagctttctctaaagatgagttgtataattctgaaaaaggatttaacattgtagttgttg 34958321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 831871 - 831926
Alignment:
Q  46 tttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||  |||||||||| |||||| |||||||||||||| ||||||||||||    
T  831871 tttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 1197051 - 1197106
Alignment:
Q  46 tttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||  |||||||||| |||||| |||||||||||||| ||||||||||||    
T  1197051 tttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 1197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12127150 - 12127215
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  12127150 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 16496215 - 16496154
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 133  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  16496215 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 16496154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 44374908 - 44374843
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  44374908 cgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44374843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 44383773 - 44383708
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  44383773 cgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44383708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 9743120 - 9743183
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  | |||||||||||| ||| ||||||||||    
T  9743120 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtag-aattagggtt 9743183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 15700887 - 15700951
Alignment:
Q  29 gtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgt 93  Q
    ||||||| | || |||||||||||||||||| ||||||| ||||| |||| ||||||||| ||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaacattgt 15700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 15119354 - 15119411
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttatagaaattagggtt 130  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||    
T  15119354 tgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtag-aattagggtt 15119411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 8851146 - 8851211
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  8851146 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 11067533 - 11067468
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  11067533 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 12372339 - 12372274
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  12372339 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12465247 - 12465312
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  12465247 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 32433576 - 32433641
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  32433576 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 32433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 14160897 - 14160960
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| ||||||| |||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  14160897 taatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 14160960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 14318083 - 14318020
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| ||||||||||||||||||||| |||||||  || ||||||||||| ||| ||||||||||    
T  14318083 taatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtag-aattagggtt 14318020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 5e-99; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 21514767 - 21514545
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||| ||||||||||||| || ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  21514767 gtagaaccttgcgatcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgtt 21514668  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  21514667 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttatacttctacccataagtgcctatttgtataaag 21514568  T
Q  201 tgattattgtggattaaattggt 223  Q
    ||||||||||||||| |||||||    
T  21514567 tgattattgtggatttaattggt 21514545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 25 - 223
Target Start/End: Original strand, 18816295 - 18816493
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 124  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18816295 taaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 18816394  T
Q  125 agggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||    
T  18816395 agggttagatttcattcataatcttttgtataatctctttttctacttctactcataagtgtctatttgtataaagtgattattgtggatttaattggt 18816493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 4380593 - 4380807
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || |||||||||||  |  ||||||||||||||||||||||||||||||||||||||||    
T  4380593 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 4380692  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         || |||||||||||||    
T  4380693 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttcta--------agcctatttgtataaag 4380784  T
Q  201 tgattattgtggattaaattggt 223  Q
    ||||||||||| ||| |||||||    
T  4380785 tgattattgtgaatttaattggt 4380807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36732388 - 36732514
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36732388 gtagaaccttgcgatcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgtt 36732487  T
Q  101 gttagttttgatgttatagaaattagg 127  Q
    ||||||||||||||||||| |||||||    
T  36732488 gttagttttgatgttataggaattagg 36732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 22208334 - 22208216
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 110  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||    
T  22208334 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttg 22208235  T
Q  111 atgttatagaaattagggtt 130  Q
    ||||| ||| ||||||||||    
T  22208234 atgttgtag-aattagggtt 22208216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 12577932 - 12577826
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttg-tagttgttgttagttttgatgttatagaaa 122  Q
    |||||||||||||| || || |||||||||||||| | ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |    
T  12577932 ctaaggtaagggtgggactaactttctctaataatag-ttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgttatagaga 12577834  T
Q  123 ttagggtt 130  Q
    ||||||||    
T  12577833 ttagggtt 12577826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 21399770 - 21399662
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  21399770 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 21399672  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  21399671 attagggtta 21399662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 21676592 - 21676704
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| |||||||||| ||||||||||    
T  21676592 ctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaaat 21676689  T
Q  124 tagggttagatttca 138  Q
    |||| ||| ||||||    
T  21676690 taggtttaaatttca 21676704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 21794263 - 21794155
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  21794263 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 21794165  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  21794164 attagggtta 21794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 22258293 - 22258403
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 110  Q
    |||||||||||  ||||||||||||| || |||||||||||||||||| ||||||||||||  |||||||||||||||||| |||||||| || ||||||    
T  22258293 cgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttttg 22258392  T
Q  111 atgttatagaa 121  Q
    ||||| |||||    
T  22258393 atgttgtagaa 22258403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 18834487 - 18834371
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    |||||||||||  ||||||||||||| || ||||||||||||||||||| |||||| ||||| |||| |||||||| | ||| ||| |||||||||||||    
T  18834487 cgatcatctaatttaaggtaagggtgggactagctttctctaataatggattgtatgattct-aaaaggggtttaa-catgttgtt-ttgttagttttga 18834391  T
Q  112 tgttatagaaattagggtta 131  Q
    ||||||||||||||||||||    
T  18834390 tgttatagaaattagggtta 18834371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 38185044 - 38185113
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  38185044 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 38185113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 21678845 - 21678946
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| |||||||||| |||||| |||    
T  21678845 ctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagcaat 21678942  T
Q  124 tagg 127  Q
    ||||    
T  21678943 tagg 21678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 18023653 - 18023722
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  18023653 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgtttttgttatgagatgt 18023722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 20494632 - 20494701
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  20494632 aaattggtgaagtataatattgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 20494701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 22483834 - 22483775
Alignment:
Q  29 gtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22345227 - 22345153
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  22345227 atcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22345153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 22356887 - 22356813
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||| ||||| |||||||||    
T  22356887 atcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaac 22356813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 21514424 - 21514367
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgttttt 273  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21514424 aaattggtgaagtataatgttgttgttgatgaatttacttctgattgttgttgttttt 21514367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 21676499 - 21676585
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 112  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||| ||||| |||||||||| |||||||||||| ||||||||||    
T  21676499 ctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgat 21676585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 22610266 - 22610371
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || ||||||||||||||| ||||||| ||||| |||| ||||||||| |  ||  | |||||||||||||||||||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgtta--ttttgttagttttgatgttatagaaat 22610363  T
Q  124 tagggtta 131  Q
    || |||||    
T  22610364 tatggtta 22610371  T

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Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 23884231 - 23884116
Alignment:
Q  15 tcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagt--tgttgttagttttgat 112  Q
    |||||||| |||||||||||| | || ||||||||||||  |||||||||||| ||||| |||| |||||||| | ||| ||  | ||||||||||||||    
T  23884231 tcatctaatctaaggtaagggcgggactagctttctcta--aatgggttgtatgattctaaaaaggggtttaa-catgttgttcttttgttagttttgat 23884135  T
Q  113 gttatagaaattagggtta 131  Q
    |||||||||||||||||||    
T  23884134 gttatagaaattagggtta 23884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 18023573 - 18023632
Alignment:
Q  42 tagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  18023573 tagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 18023632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 36306062 - 36305988
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaa 87  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||  |||||||| ||||||||||||| |||||    
T  36306062 cgatcatctaatctaaggtaagggtgagactagctttctctaataa-cggttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 38184929 - 38184984
Alignment:
Q  42 tagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagtt 97  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  38184929 tagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagtt 38184984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5761609 - 5761555
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaat 55  Q
    |||| |||||||||||||||||||||||||||||||| || || |||||||||||    
T  5761609 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaat 5761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 22483970 - 22483912
Alignment:
Q  45 ctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| | || |||||||||    
T  22483970 ctttctctaataatgagttgtataattcttaaaaagggtttaacatggttgttgttgtt 22483912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 22366123 - 22366072
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtt 270  Q
    |||||||| ||||||||||||||||   |||||||||||||||||||||||||||    
T  22366123 aaattggtgaagtataatgttgttg---atgaattcacttctgattgttgttgtt 22366072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 21579193 - 21579310
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttg 110  Q
    |||||||||||  |||||||||||||||| || | |||| |||| ||  ||  | |||| |||||||||||||||||||||||||||||  || ||||||    
T  21579193 cgatcatctaatttaaggtaagggtgtgactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgttaatatgttttg 21579291  T
Q  111 atgttatagaaattagggtt 130  Q
    ||||| ||| ||||||||||    
T  21579292 atgttgtag-aattagggtt 21579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17978392 - 17978520
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||| |||||||||||||| || ||   |||| |||| ||  | | | |||| |||||||||| ||||||||||||||||||    
T  17978392 gtagaaccttgcgatcatctaaactaaggtaagggtgggactaaacttctataatcataag-tatgtaatcctgaaaaaggatttaaccttgtagttgtt 17978490  T
Q  101 gtta-gttttgatgttatagaaattagggtt 130  Q
      || ||||||||||| ||| ||||||||||    
T  17978491 aataggttttgatgttgtag-aattagggtt 17978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 22474767 - 22474704
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  22474767 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 22474704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 12037205 - 12037260
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttatagaa 121  Q
    |||| |||||||||||||||||||||||||||||  ||| |||||||||| |||||    
T  12037205 taatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaa 12037260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 22966815 - 22966756
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||  ||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagcgattagggtta 22966756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 29762909 - 29762964
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaa 121  Q
    |||| |||||||||||||||||||||||||||||  | |||||||||||| |||||    
T  29762909 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaa 29762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 20022027 - 20022093
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaa 78  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  || |||||||||||||||    
T  20022027 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaa 20022093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 22723305 - 22723251
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtt 270  Q
    |||||| | ||||||  |||| ||||||||||||||||||||||||||| |||||    
T  22723305 aaattgatgaagtattttgttattgttgatgaattcacttctgattgtttttgtt 22723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 39694271 - 39694329
Alignment:
Q  19 ctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||| ||||||| |||| |||||||||||||| ||  ||||||| |||||||||    
T  39694271 ctaacctaatgtaagggcgtgactagctttctctaattataagttgtatgattctgaaa 39694329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 21697509 - 21697566
Alignment:
Q  75 aaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 131  Q
    |||||||||||||| |||||||||||  || |||||||||||| ||| ||||||||||    
T  21697509 aaaaagggtttaacattgtagttgttaataggttttgatgttaaagagattagggtta 21697566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 23889856 - 23889799
Alignment:
Q  20 taacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||| |||||||| || || |||||||||||  | ||||||||||||||||||    
T  23889856 taacctaagctaagggtgagattaactttctctaattctaggttgtataattctgaaa 23889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 24907915 - 24907883
Alignment:
Q  238 ttgttgatgaattcacttctgattgttgttgtt 270  Q
    |||||||||||||||||| ||||||||||||||    
T  24907915 ttgttgatgaattcacttttgattgttgttgtt 24907883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 41680174 - 41680237
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||| ||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  41680174 taatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 41680237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 660864 - 660644
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  660864 gtagaaccttgcgatcatctaacctaaggtaaggggg-gactagctttctctaataaggggttgtataattctgaaaaagg-tttaaccttgtagttgtt 660767  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  660766 gttagttttgatgttatagaaatttgggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaag 660667  T
Q  201 tgattattgtggattaaattggt 223  Q
    ||||||||||||||| |||||||    
T  660666 tgattattgtggatttaattggt 660644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 23199194 - 23199405
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    |||||||||||  ||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||    
T  23199194 cgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttga 23199293  T
Q  112 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  23199294 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttcttcttctacccataagtgcctatttgtataaagtgattattgtg 23199393  T
Q  212 gattaaattggt 223  Q
    |||| |||||||    
T  23199394 gatttaattggt 23199405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 18744927 - 18744765
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 18744828  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgc 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18744827 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgc 18744765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 1627071 - 1627266
Alignment:
Q  29 gtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaa-agggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| |||| |||||||| ||||||| || |||||||||||||||||||||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaaagggtttacccttgtatttattgttagttttgatgttatagaaattagg 1627170  T
Q  128 gttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  1627171 gttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatgtgtataaagtgattattgtggatttaattggt 1627266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 16063804 - 16063701
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16063804 ctaaggtaagggtgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataggaat 16063705  T
Q  124 tagg 127  Q
    ||||    
T  16063704 tagg 16063701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 6551289 - 6551392
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || |||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttgttagatttgatgttataggaat 6551388  T
Q  124 tagg 127  Q
    ||||    
T  6551389 tagg 6551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 21398631 - 21398752
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttg--ttgttagtttt 109  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| ||| || | | |||  |||  |||||||||||    
T  21398631 cgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaagggggtttaacatgtttttgttttgttagtttt 21398730  T
Q  110 gatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||    
T  21398731 gatgttatagaaattagggtta 21398752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 32607303 - 32607423
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagtttt 109  Q
    |||| |||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||    
T  32607303 cgattatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 32607401  T
Q  110 gatgttatagaaattagggtta 131  Q
    ||||||||||||||||| ||||    
T  32607402 gatgttatagaaattagagtta 32607423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 1627387 - 1627456
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  1627387 aaattgatgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 1627456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 18744614 - 18744558
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 272  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18744614 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 18744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 21504147 - 21504081
Alignment:
Q  70 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagattt 136  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| ||||    
T  21504147 ttctgaaaaagggtttaagtttgtagttgttagtagttttgatgttatagaaattagggttaaattt 21504081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1626894 - 1626992
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||| |||||||||||||||||||||||| || | |||| |||| ||  | | | |||| |||||||||||||||||||||||||||||    
T  1626894 gtagaaccttgcgattatctaacctaaggtaagggtgtgactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagttgtt 1626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26750107 - 26749978
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || | || | |||| ||  | | |||||| ||||||| |||||||||||||||||||||    
T  26750107 gtagaaccttgcgatcatctaacctaaggtaagggtgagactaaccttttttaatcataag-tatataatcctgaaaaggggtttaaccttgtagttgtt 26750009  T
Q  101 -gttagttttgatgttatagaaattagggtta 131  Q
      | |||||||||||| ||| |||||||||||    
T  26750008 aataagttttgatgttgtag-aattagggtta 26749978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14025783 - 14025881
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||| |||||||||||||| || || | |||| |||| ||  ||  | |||| |||||||||||||||||||||||||||||    
T  14025783 gtagaaccttgcgatcatctaatctaaggtaagggtgggactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgtt 14025881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 20313328 - 20313226
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 121  Q
    |||||||||||||| || |||||| |||||||| |||||| ||||||||||||| |||||||||| | || ||||||||| | |||||||| ||| ||||    
T  20313328 ctaaggtaagggtgggactagctt-ctctaatagtgggtt-tataattctgaaatagggtttaacatggttgttgttgtttgattttgatgattagagaa 20313231  T
Q  122 attag 126  Q
    |||||    
T  20313230 attag 20313226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 660506 - 660467
Alignment:
Q  236 tgttgttgatgaattcacttctgattgttgttgtttttgt 275  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  660506 tgttgttgatgaattaacttctgattgttgttgtttttgt 660467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 24068234 - 24068175
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 24068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 8833182 - 8833310
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||||||| |||||||||| || |  | |||| |||| ||  | | | |||| |||||||||||||||||||| ||||||||    
T  8833182 gtagaaccttgcgatcatctaacctagggtaagggtgggactgaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttatagttgtt 8833280  T
Q  101 gtta-gttttgatgttatagaaattagggtt 130  Q
      || ||||||||||| ||| ||||||||||    
T  8833281 aataggttttgatgttgtag-aattagggtt 8833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 21398833 - 21398904
Alignment:
Q  63 tgtataattctgaaaaa-gggtttaacctt----gtagttgttgttagttttgatgttatagaaattagggt 129  Q
    ||||||||||||||||| ||||||||||||    || |||||||||||||||||||||||||| | ||||||    
T  21398833 tgtataattctgaaaaaagggtttaacctttgttgttgttgttgttagttttgatgttatagagaatagggt 21398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 31622178 - 31622117
Alignment:
Q  16 catctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||| |||||||||||||| || || |||||||||||  | ||||||||||||||||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 31622117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 21300032 - 21300096
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  21300032 gatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 22111955 - 22111923
Alignment:
Q  99 ttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||||||||||||||||||||||||||||    
T  22111955 ttgttagttttgatgttatagaaattagggtta 22111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 26762413 - 26762350
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  26762413 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 26762350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 36315366 - 36315305
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 133  Q
    ||||||| ||||||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||    
T  36315366 tgaaaaatggtttaaccttatagttgtcgttaggtttgaggattagagaaattagggttaga 36315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 28476724 - 28476930
Alignment:
Q  15 tcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgt 114  Q
    |||||||| |||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28476724 tcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgt 28476823  T
Q  115 tatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28476824 tatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggat 28476923  T
Q  215 taaattg 221  Q
    | |||||    
T  28476924 ttaattg 28476930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24719487 - 24719708
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24719487 gtagaaccttgcgatcatctaacctatggtaagggtg-gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 24719585  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
     |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  24719586 attagttttgatgttatagaaattaaggttaaatttcattcataatcttttgtataatctttttttctacttctacccataagtgcctatttgtataaag 24719685  T
Q  201 tgattattgtggattaaattggt 223  Q
    ||| ||||||||||| |||||||    
T  24719686 tgactattgtggatttaattggt 24719708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 12710930 - 12710759
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| ||||||||| | || || ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12710930 atcatctaatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttgttagttttgatg 12710831  T
Q  114 ttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg 185  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12710830 ttatagaaattaaggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg 12710759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 38056671 - 38056780
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||    
T  38056671 ctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttttgggaat 38056770  T
Q  124 tagggttaga 133  Q
    |||| |||||    
T  38056771 taggtttaga 38056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 50544925 - 50544841
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 108  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50544925 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 50544841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 24007212 - 24007330
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaacctt-gtagttgttgttagttttg 110  Q
    ||||||||||  |||||||||||||| || ||||||||||| ||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  24007212 cgatcatctatactaaggtaagggtgggactagctttctctgataatga-ttgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttg 24007310  T
Q  111 atgttatagaaattagggtt 130  Q
    |||||||||| |||||||||    
T  24007311 atgttatagagattagggtt 24007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 8275987 - 8276097
Alignment:
Q  23 cctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 122  Q
    |||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||||||| | | ||    
T  8275987 cctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagttgttgatatttttgatgttttgggaa 8276086  T
Q  123 ttagggttaga 133  Q
    ||||| |||||    
T  8276087 ttaggtttaga 8276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 8306671 - 8306552
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagtttt 109  Q
    ||||||||||| |||||||||| ||| || |||||||||||||||||||||||||||||||| |||| |||||||||   |||| ||| |||||||||||    
T  8306671 cgatcatctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgtt-ttgttagtttt 8306573  T
Q  110 gatgttatagaaattagggtt 130  Q
    |||||||||||||||||||||    
T  8306572 gatgttatagaaattagggtt 8306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 22145666 - 22145752
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttgttaggtttga 22145752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 34392821 - 34392713
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  34392821 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 34392723  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  34392722 attagggtta 34392713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 17901783 - 17901857
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  17901783 atcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 17901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 28477053 - 28477112
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgt 275  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28477053 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgt 28477112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 20588703 - 20588581
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattct--gaaaaagggtttaac--cttgtagttgttgttagtt 107  Q
    |||||||| ||  ||||||||||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||   || | ||| |||||||||    
T  20588703 cgatcatccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatgtttttgtt-ttgttagtt 20588605  T
Q  108 ttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||    
T  20588604 ttgatgttatagaaattagggtta 20588581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 20593241 - 20593119
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattct--gaaaaagggtttaac--cttgtagttgttgttagtt 107  Q
    |||||||| ||  ||||||||||||| || |||||||||||||||||||||||||| |||||   ||||||||||||||   || | ||| |||||||||    
T  20593241 cgatcatccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacatgtttttgtt-ttgttagtt 20593143  T
Q  108 ttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||    
T  20593142 ttgatgttatagaaattagggtta 20593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 39061333 - 39061268
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  39061333 tataattctgaaaaaaggtttaaccttgtagttgttgatagttttgatgttatagaatttagggtt 39061268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 45499605 - 45499487
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttga 111  Q
    ||||| ||| |||||||||||||| || |||||||||||||||||||||||||| |||||  ||| |||||||||   |||| ||| ||||||||||| |    
T  45499605 atcatataatctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaacatgttgttgtt-ttgttagttttaa 45499507  T
Q  112 tgttatagaaattagggtta 131  Q
     |||||||||||||||||||    
T  45499506 cgttatagaaattagggtta 45499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 6834239 - 6834150
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    ||||||||  |||||| |||||||  | |||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||||    
T  6834239 atcatctattctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaaaagggtttaacatggttgttgttgtt 6834150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 635003 - 635064
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggttt 85  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||||    
T  635003 ctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 14792539 - 14792637
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||| |||| ||  | | | |||| |||||||||||||||||||||||||||||    
T  14792539 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagttgtt 14792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 35895162 - 35895088
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||| |||||||| ||||  || ||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  35895162 atcatctaatctaaggtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaac 35895088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18121679 - 18121559
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||| |||| ||  | | | |||| |||||||||| ||||||||||||||||||    
T  18121679 gtagaaccttgcgatcatctaacctaaggtaagggtgggattaaccttctttaatcataag-tatgtaatcctgaaaaaggatttaaccttgtagttgtt 18121581  T
Q  101 gtta-gttttgatgttatagaa 121  Q
      || ||||||||||| |||||    
T  18121580 aataggttttgatgttgtagaa 18121559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 20708049 - 20708163
Alignment:
Q  15 tcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgt 114  Q
    ||||| || |||||||||||||| || || | |||| ||| | || ||| |||||||||||||||||| ||||| |||  ||||||| || || ||||||    
T  20708049 tcatccaatctaaggtaagggtgggactaaccttctttaaca-tgagttctataattctgaaaaaggggttaactttgatgttgttgataattgtgatgt 20708147  T
Q  115 tatagaaattagggtt 130  Q
    || |||||||||||||    
T  20708148 taaagaaattagggtt 20708163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 40390155 - 40390096
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagatattagggtta 40390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 21188073 - 21188135
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||| ||| ||||| |||||  |||||||||||| ||||||||||||||||||| |||||    
T  21188073 tataattttgagaaaggatttaattttgtagttgttgatagttttgatgttatagaagttagg 21188135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 14294858 - 14294919
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 133  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  14294858 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 14294919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 41931146 - 41931202
Alignment:
Q  126 gggttagatttcattcataatctt-ttgtataatctctttttctacttctacccataa 182  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  41931146 gggttagttttcattcataatcttcttgtataatctc-ttttctatttctacccataa 41931202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 51131378 - 51131317
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 133  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  51131378 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 51131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 16401963 - 16401902
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||||||| || || ||| ||||||||||||||| ||||||||||||| ||||||||||    
T  16401963 taaggtaagggtgggactaactt-ctctaataatgggtt-tataattctgaaatagggtttaac 16401902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 38887070 - 38887191
Alignment:
Q  8 cttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gt 106  Q
    |||| |||||||||||||||||||||||||  | || | |||| |||| ||  ||  | |||| |||||||||||||||| ||||||||||||  || ||    
T  38887070 cttgtgatcatctaacctaaggtaagggtgaaactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaatcttgtagttgttaataggt 38887168  T
Q  107 tttgatgttatagaaattagggtt 130  Q
    ||||||||| ||| ||||||||||    
T  38887169 tttgatgttgtag-aattagggtt 38887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 44892525 - 44892427
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||||||||| |||||||| || || | |||| |||| ||  | | | ||||  ||||||||| ||||||||||||||||||    
T  44892525 gtagaaccttgcgatcatctaacctaagttaagggtgggactaaccttctttaatcataag-tatgtaatcttgaaaaaggatttaaccttgtagttgtt 44892427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 20822763 - 20822729
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaatt 250  Q
    |||||||| ||||||||||||||||||||||||||    
T  20822763 aaattggtgaagtataatgttgttgttgatgaatt 20822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 16058301 - 16058366
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||||||||||| || ||  ||||||||||  |  |||||||||||||||||    
T  16058301 cgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaa 16058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 19676776 - 19676711
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  19676776 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19676711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 21046036 - 21046101
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  21046036 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 21243799 - 21243832
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||    
T  21243799 taatcctgaaaaagggtttaaccttgtagttgtt 21243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 270
Target Start/End: Complemental strand, 20822726 - 20822698
Alignment:
Q  242 tgatgaattcacttctgattgttgttgtt 270  Q
    |||||||||||||||||||||||||||||    
T  20822726 tgatgaattcacttctgattgttgttgtt 20822698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 3411 - 3620
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3411 atcatctaatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 3510  T
Q  114 ttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtgga 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  3511 ttatagaaattagggttatatttcattcataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgagga 3610  T
Q  214 ttaaattggt 223  Q
    || |||||||    
T  3611 tttaattggt 3620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 3741 - 3810
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  3741 aaattggtgaactataatgttgttgttgatgaattcacttctgattgttgttatttttgttatgagatgt 3810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 21315475 - 21315674
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21315475 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 21315574  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  21315575 tattgttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 21315674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 21335265 - 21335464
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21335265 ctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaat 21335364  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||    
T  21335365 tatggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtagatttaattggt 21335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 21369358 - 21369147
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  21369358 cgatcatctaatctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtttatattagttttga 21369259  T
Q  112 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||    
T  21369258 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctactactacccataaatgtctatttgtataaagtgattattgtg 21369159  T
Q  212 gattaaattggt 223  Q
    |||| |||||||    
T  21369158 gatttaattggt 21369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 23610702 - 23610474
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  23610702 gtagaaccttgcgaacatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgtt 23610603  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataa------tctctttttctacttctacccataagtgcatatttgt 194  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||      | | ||||||||||||||||||||||||| |||||||    
T  23610602 gtttgttttgatgttatagaaattagggttagatttaattcataatcttttgtataaagtgattatgtttttctacttctacccataagtgcctatttgt 23610503  T
Q  195 ataaagtgattattgtggattaaattggt 223  Q
    ||||||||||||||||| ||| |||||||    
T  23610502 ataaagtgattattgtgaatttaattggt 23610474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 149488 - 149610
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaa---gggtttaac--cttgtagttgttgttagt 106  Q
    ||||||||||| ||||||||||||||  | |||||||||||||||||| ||||||||||||| |||||   |||||||||   |||| ||| ||||||||    
T  149488 cgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgtt-ttgttagt 149586  T
Q  107 tttgatgttatagaaattagggtt 130  Q
    ||||||||||||||||||||||||    
T  149587 tttgatgttatagaaattagggtt 149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 28652593 - 28652662
Alignment:
Q  67 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 135  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28652593 taattctgaaaaagggtttagcctttgtagttgttgttagttttgatgttatagaaattagggttagatt 28652662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 28344987 - 28345092
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||| ||||| |||| |||||||| | ||| ||| |||||||||| ||||||||||||||    
T  28344987 ctaagataagggtgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaa-catgttgtt-ttgttagtttcgatgttatagaaat 28345084  T
Q  124 tagggtta 131  Q
    ||||||||    
T  28345085 tagggtta 28345092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 23801559 - 23801485
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||    
T  23801559 atcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaac 23801485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 25584302 - 25584367
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||    
T  25584302 tataattctgaaaaagggtttaaccttgtcgttgatgatagttttgatgttatagaagttagggtt 25584367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 34491239 - 34491350
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaa-taatgggttgtataattctgaaaaagggtttaaccttgtagttgttgt----tagttttgatgttata 118  Q
    |||||||||||||| || |||||| |||||| ||| | |||||||||||||||||||||||||||| | || ||||||||    ||||||||||||||||    
T  34491239 ctaaggtaagggtgggactagctt-ctctaaataacgagttgtataattctgaaaaagggtttaacatggttgttgttgttttgtagttttgatgttata 34491337  T
Q  119 gaaattagggtta 131  Q
     || |||||||||    
T  34491338 aaatttagggtta 34491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 19647246 - 19647180
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||| |||||||||    
T  19647246 tataattctgaaaaagggtttaatcttgtagttgttaatagttttgattgtatagaagttagggtta 19647180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19201176 - 19201252
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||| ||||||||||||||||||||||| |||||||| || || |||||||||||  |  |||||||||||||||||    
T  19201176 gtagaaccttgcgatcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaa 19201252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 20005970 - 20006072
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || |||| |||| |||| ||| ||  |||||||||||||||||||||||  |||| ||||||  || |||||||||||||||| |    
T  20005970 ctaaggtaagggtgggactagccttctttaatcatgagtc-tataattctgaaaaagggtttaattttgttgttgttaataattttgatgttatagaagt 20006068  T
Q  124 tagg 127  Q
    ||||    
T  20006069 tagg 20006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 45535938 - 45535876
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||||||||||||||||| ||||| ||||||| || || || |||||||||| |||||    
T  45535938 tataattctgaaaaagggtttaatcttgttgttgttgataattctgttgttatagaagttagg 45535876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 17307551 - 17307486
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  17307551 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 25584186 - 25584218
Alignment:
Q  99 ttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||||||||||||||||||||||||||||    
T  25584186 ttgttagttttgatgttatagaaattagggtta 25584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 36734450 - 36734552
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 121  Q
    |||||||||||||| || || ||| ||||||||||||||| ||||||||| ||| |||||||||| | || ||||||||| | |||||||| ||| ||||    
T  36734450 ctaaggtaagggtgggattaactt-ctctaataatgggtt-tataattctaaaatagggtttaacatggttgttgttgtttgattttgatgattagagaa 36734547  T
Q  122 attag 126  Q
    |||||    
T  36734548 attag 36734552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 24780827 - 24780892
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  24780827 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 270
Target Start/End: Complemental strand, 29114460 - 29114431
Alignment:
Q  241 ttgatgaattcacttctgattgttgttgtt 270  Q
    ||||||||||||||||||||||||||||||    
T  29114460 ttgatgaattcacttctgattgttgttgtt 29114431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 20410497 - 20410708
Alignment:
Q  10 tgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttt 109  Q
    |||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  20410497 tgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgttattagtttt 20410596  T
Q  110 gatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattg 209  Q
    ||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20410597 gatg--atagaaattagggttagatctcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattg 20410694  T
Q  210 tggattaaattggt 223  Q
    |||||| |||||||    
T  20410695 tggatttaattggt 20410708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 122 - 285
Target Start/End: Original strand, 21686158 - 21686321
Alignment:
Q  122 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21686158 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggattaaattg 21686257  T
Q  222 gtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  21686258 gtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgcgatgt 21686321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 15998943 - 15998806
Alignment:
Q  23 cctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 122  Q
    ||||||||||||||| || || |||||||||||  |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15998943 cctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttatagaaa 15998844  T
Q  123 ttagggttagatttcattcataatcttttgtataatct 160  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15998843 ttagggttagatttcattgataatcttttgtataatct 15998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21683051 - 21683171
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21683051 gtaggaccttgcgatcatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgtt 21683150  T
Q  101 gttagttttgatgttatagaaa 122  Q
    | ||||||||||||||||||||    
T  21683151 g-tagttttgatgttatagaaa 21683171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 19825473 - 19825576
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  19825473 cgatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgttagttttga 19825572  T
Q  112 tgtt 115  Q
    ||||    
T  19825573 tgtt 19825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 18982625 - 18982515
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 122  Q
    ||||||||| |||| || || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||||    
T  18982625 ctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgctaggtttgatgattagagaaa 18982526  T
Q  123 ttagggttaga 133  Q
    |||||||||||    
T  18982525 ttagggttaga 18982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 10446280 - 10446162
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttga 111  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||| ||    
T  10446280 atcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttcga 10446182  T
Q  112 tgttatagaaattagggtta 131  Q
    ||||||||||||||||||||    
T  10446181 tgttatagaaattagggtta 10446162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 23658142 - 23658044
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||    
T  23658142 ctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 23658044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 34140445 - 34140554
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || |||||| ||||||||||||||| ||||||| |||||   ||||||| |||||||||||||||||||||||||    
T  34140445 atcatctaatctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattttgaaatctggtttaatcttgtagttgttgttagttttgatg 34140542  T
Q  114 ttatagaaatta 125  Q
    |||||| |||||    
T  34140543 ttataggaatta 34140554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 34153061 - 34153170
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || |||||| ||||||||||||||| ||||||| |||||   | ||||| |||||||||||||||||||||||||    
T  34153061 atcatctaatctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattttgaaatctgttttaatcttgtagttgttgttagttttgatg 34153158  T
Q  114 ttatagaaatta 125  Q
    |||||| |||||    
T  34153159 ttataggaatta 34153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 29045334 - 29045260
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||  |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29045334 atcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaaaagggtttaac 29045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 1819005 - 1818899
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || | |||| |||| ||| ||  |||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  1819005 ctaaggtaagggtgagactaaccttctttaatcatgagta-tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaat 1818907  T
Q  124 tagggtta 131  Q
    ||||||||    
T  1818906 tagggtta 1818899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 24506155 - 24506217
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagttagg 24506217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7217220 - 7217347
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||| ||||||||||||||| || || | |||| |||| ||  ||  | |||| |||||||||||||||||||||||||||||    
T  7217220 gtagaaccttgcgatcatctagcctaaggtaagggtgagactaaccttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgtt 7217318  T
Q  101 gttagttttgatgttatagaaattagggtt 130  Q
      ||| ||||||||| ||| ||||||||||    
T  7217319 aataggtttgatgttgtag-aattagggtt 7217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 25601371 - 25601437
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatt 135  Q
    |||||||||||||||||||||||||   || |||||||||||| |||||||||||||||||||||||||    
T  25601371 taattctgaaaaagggtttaaccttt--gtagttgttagttttcatgttatagaaattagggttagatt 25601437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22557323 - 22557204
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||| | || ||  | | | |||| |||||||||||||||||||||||||||||    
T  22557323 gtagaaccttgcgatcatctaacctaaggtaagggtgggagtaaccttct-ttatcataag-tatgtaatcctgaaaaagggtttaaccttgtagttgtt 22557226  T
Q  101 gtta-gttttgatgttatagaa 121  Q
      || ||||||||||| |||||    
T  22557225 aataggttttgatgttgtagaa 22557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 18982422 - 18982362
Alignment:
Q  70 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||||||||||  |||||||||||| ||||||||||| | ||||| ||||||||    
T  18982422 ttctgaaaaagggtttaattttgtagttgttgatagttttgatgctgtagaagttagggtt 18982362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 18455049 - 18455147
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||| ||||||||||||||||||||||||| || || | |||| |||| ||  | | | |||| |||||||||| ||||||||||||||||||    
T  18455049 gtagaaccttgtgatcatctaacctaaggtaagggtgggagtaaccttctttaatcataag-tatgtaatcctgaaaaaggttttaaccttgtagttgtt 18455147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 31734718 - 31734655
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||||||||||||||||||||||||| |||||||  || ||||||||||| || |||||||||||    
T  31734718 taattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgta-aaattagggtt 31734655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 7828037 - 7827972
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  7828037 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 13285809 - 13285724
Alignment:
Q  16 catctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    ||||||| |||||||||||||| || || | |||| |||| ||| |||  ||||||||||||| ||||||| | |||| |||||||    
T  13285809 catctaatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaaaggggtttaccattgttgttgttg 13285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 19655218 - 19655283
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  19655218 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 19655283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 23150274 - 23150339
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  23150274 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 27329980 - 27330033
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||| |||||| || |||||||||||  | ||||||||||||||||||    
T  27329980 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaa 27330033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 27390720 - 27390773
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||| |||||| || |||||||||||  | ||||||||||||||||||    
T  27390720 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaa 27390773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 23431488 - 23431551
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| ||||||||||||||||||||||||||| |  || ||||||||||| ||| ||||||||||    
T  23431488 taatcctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgtag-aattagggtt 23431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 14520499 - 14520300
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  14520499 ctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgttataaaaat 14520400  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14520399 tagggttaaatttcactcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggt 14520300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 17208577 - 17208378
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17208577 ctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaat 17208478  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||  |||||||||||||||||||||||||||| |||||||    
T  17208477 tagggttagatttcattcataatcttttgtataatctctttttcttcttctattcataagtgtctatttgtataaagtgattattgtggatttaattggt 17208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 24547276 - 24547054
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| ||||| |||| | ||||||| | || ||||||    
T  24547276 gtagaaccttgcgatcatctaacctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaacat-gttgttgtt 24547178  T
Q  101 --gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataa 198  Q
      |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24547177 ttgttagttt-gatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataa 24547079  T
Q  199 agtgattattgtggattaaattggt 223  Q
    ||||||||||||||||| |||||||    
T  24547078 agtgattattgtggatttaattggt 24547054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24548930 - 24549149
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||| ||||||||| || || |||| |||||||||||||||||| ||||| |||| ||||||||  | || ||| ||    
T  24548930 gtagaaccttgcgatcatctaacctaaagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaatat-gttgtt-tt 24549027  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  24549028 gttagttt-gatgttatagaaattagggttagatttcattcataatattttgtacaatctctttttctacttctacccataagtgcctatttgcataaag 24549126  T
Q  201 tgattattgtggattaaattggt 223  Q
    | ||||||||||||| |||||||    
T  24549127 taattattgtggatttaattggt 24549149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 14641535 - 14641656
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  14641535 cgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagtattga 14641634  T
Q  112 tgttatagaaattagggttaga 133  Q
    |||| | | ||||||| |||||    
T  14641635 tgttttgggaattaggtttaga 14641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 29907702 - 29907582
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29907702 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatg 29907603  T
Q  114 -ttatagaaattagggttaga 133  Q
     ||| ||||||||||||||||    
T  29907602 attagagaaattagggttaga 29907582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 29948868 - 29948748
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29948868 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatg 29948769  T
Q  114 -ttatagaaattagggttaga 133  Q
     ||| ||||||||||||||||    
T  29948768 attagagaaattagggttaga 29948748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 29998022 - 29997902
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29998022 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatg 29997923  T
Q  114 -ttatagaaattagggttaga 133  Q
     ||| ||||||||||||||||    
T  29997922 attagagaaattagggttaga 29997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 14152394 - 14152504
Alignment:
Q  20 taacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttata 118  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||| ||    
T  14152394 taacctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgta 14152493  T
Q  119 gaaattagggtt 130  Q
    | ||||||||||    
T  14152494 g-aattagggtt 14152504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6159470 - 6159350
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagtttt 109  Q
    ||||||||||| |||||||||||||| || | |||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||    
T  6159470 cgatcatctaatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 6159372  T
Q  110 gatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||    
T  6159371 gatgttatagaaattagggtta 6159350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 22841278 - 22841390
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac---cttgtagttg--ttgttagttttgatgttata 118  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||  ||||||||||||| ||||||    
T  22841278 ctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatgattgttgttgttttgttagttttgaggttata 22841377  T
Q  119 gaaattagggtta 131  Q
    |||||||||||||    
T  22841378 gaaattagggtta 22841390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 54875474 - 54875581
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaa 122  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| ||||||||||||||||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 54875572  T
Q  123 ttagggtta 131  Q
    |||||||||    
T  54875573 ttagggtta 54875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 3527156 - 3527261
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||| | |||| |||||||| | ||| ||| |||||||||||||||||||||||||    
T  3527156 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaa-catgttgtt-ttgttagttttgatgttatagaaat 3527253  T
Q  124 tagggtta 131  Q
    ||||||||    
T  3527254 tagggtta 3527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 2841505 - 2841613
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||  ||||||||   |||| ||| |||||||||||||||||||||||    
T  2841505 ctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 2841603  T
Q  122 attagggtta 131  Q
    ||||| ||||    
T  2841604 attagagtta 2841613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 6156763 - 6156656
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  6156763 ctaaggtaagggtgggactagctttctctaataatgggttgtatgattct-aaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 6156666  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  6156665 attagggtta 6156656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 2247998 - 2248067
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  2247998 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 2248067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 17684835 - 17684942
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaa 122  Q
    ||||||||||||| || ||| ||||| |||||||||||||||| ||||| |||| |||||||||  ||||| ||| ||||||||||||||||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaacatcttgttgtt-ttgttagttttgatgttatagaaa 17684933  T
Q  123 ttagggtta 131  Q
    |||||||||    
T  17684934 ttagggtta 17684942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 50350803 - 50350928
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaa--gggtttaacctt-gtagttgttgttagttt 108  Q
    ||||||||||| |||||||||||||| || || | |||| |||| ||| ||  |||||||||||||||  |||||||||||| |||||| ||||||||||    
T  50350803 cgatcatctaatctaaggtaagggtgggactaaccttctttaatcatgagta-tataattctgaaaaaaggggtttaacctttgtagtttttgttagttt 50350901  T
Q  109 tgatgttatagaaattagggttagatt 135  Q
    |||||||||||| ||||||||||||||    
T  50350902 tgatgttatagagattagggttagatt 50350928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 5215699 - 5215594
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaat 123  Q
    |||||||||||||  | |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||  || ||||||||||| ||| |||    
T  5215699 taaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttattaataggttttgatgttgtag-aat 5215601  T
Q  124 tagggtt 130  Q
    |||||||    
T  5215600 tagggtt 5215594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 14442228 - 14442120
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    |||||||||||||| || ||||||||| |||||||||||||||| ||||| ||||  ||||||||   |||| ||| |||||||||||||||||||||||    
T  14442228 ctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 14442130  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  14442129 attagggtta 14442120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 17669698 - 17669805
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaa 122  Q
    |||||||| | || || |||||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| ||||||||||||||||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaaa 17669796  T
Q  123 ttagggtta 131  Q
    |||||||||    
T  17669797 ttagggtta 17669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 24546933 - 24546876
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgttttt 273  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24546933 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgttttt 24546876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 45803338 - 45803409
Alignment:
Q  32 agggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  45803338 agggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttgtt 45803409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 15566809 - 15566721
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    ||||||| ||| |||| ||||||||| || || |||||||||||  |  ||||||||||||||||||||||||||||||||||||||||    
T  15566809 cgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 15566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 2247883 - 2247942
Alignment:
Q  42 tagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  2247883 tagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 2247942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 21845691 - 21845762
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagattt 136  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| || |||||    
T  21845691 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaattaggttttgattt 21845762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 24549270 - 24549325
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgttt 271  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24549270 aaattggtgaagtataatgttgttgttgatgaattcacttcttattgttgttgttt 24549325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 50755274 - 50755360
Alignment:
Q  45 ctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttg--ttgttagttttgatgttatagaaattagggtt 130  Q
    |||||||||||||||| |||||| ||||| |||| ||||||||| | || ||||  ||||||||||||||||||||||||||||||||    
T  50755274 ctttctctaataatggattgtatgattctaaaaaggggtttaacat-gttgttgctttgttagttttgatgttatagaaattagggtt 50755360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 3160626 - 3160728
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || | |||| |||| ||| ||  ||||||||| |||| ||||||||| |||||||||||| |||||||||| ||||||||||    
T  3160626 ctaaggtaagggtgagactaaccttctttaatcatgagta-tataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatagaaat 3160724  T
Q  124 tagg 127  Q
    ||||    
T  3160725 tagg 3160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 12917305 - 12917384
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    ||||| |||||||| || || ||||||||||||||||||||||| ||||| |||||||||||||| | || |||||||||    
T  12917305 ctaagataagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaacatggttgttgttgtt 12917384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 48631344 - 48631278
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| | |||||||    
T  48631344 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaagtcagggtta 48631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 13520449 - 13520408
Alignment:
Q  86 aaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  13520449 aaccttgtagttgttgttagttttgatgttataggaattagg 13520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 6003247 - 6003133
Alignment:
Q  15 tcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgt 114  Q
    ||||| || |||||||||||||| || || | |||| ||||| || ||| ||||||||||||||||||  |||| |||  ||||||| || || ||||||    
T  6003247 tcatccaatctaaggtaagggtgggactaaccttctttaata-tgagttctataattctgaaaaaggggctaactttgatgttgttgataattgtgatgt 6003149  T
Q  115 tatagaaattagggtt 130  Q
    || |||||||||||||    
T  6003148 taaagaaattagggtt 6003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 25104106 - 25104148
Alignment:
Q  228 tataatgttgttgttgatgaattcacttctgattgttgttgtt 270  Q
    |||||||||||||||||||||||||||| |||||||| |||||    
T  25104106 tataatgttgttgttgatgaattcacttatgattgttattgtt 25104148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 25202187 - 25202075
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 121  Q
    |||||||||||||| || |||| ||| ||||||||||||| ||||| ||||||| |||||||||| | || ||||||||| | |||||||| ||| ||||    
T  25202187 ctaaggtaagggtgggactagc-ttcgctaataatgggtt-tataaatctgaaatagggtttaacatggttgttgttgtttgattttgatgattagagaa 25202090  T
Q  122 attagggttagattt 136  Q
    |||||| || |||||    
T  25202089 attaggttttgattt 25202075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 53646100 - 53646163
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  53646100 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 53646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 54330348 - 54330411
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  54330348 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 54330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11563801 - 11563724
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaa 78  Q
    |||| ||||| ||||||||||| |||||||||||||| || || | |||||||||  |  || |||||||||||||||    
T  11563801 gtagaaccttccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaa 11563724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 12155089 - 12155130
Alignment:
Q  90 ttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  12155089 ttgtagttgttaatagttttgatgttatagaagttagggtta 12155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 17045031 - 17044966
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  17045031 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 17047191 - 17047126
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  17047191 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 17518860 - 17518925
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||| ||||||| || || |||||||||||  |  |||||||||||||||||    
T  17518860 cgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 17533722 - 17533787
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||| ||||||| || || |||||||||||  |  |||||||||||||||||    
T  17533722 cgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17533787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 22306570 - 22306635
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  22306570 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 49900795 - 49900730
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| |||||||||||||| || ||  ||||||||||  |  |||||||||||||||||    
T  49900795 cgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 49900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 12150993 - 12151053
Alignment:
Q  71 tctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||| || ||||  |||||| |||||  ||||||||||||||||||| |||||||||    
T  12150993 tctgaaaagggatttaggcttgtatttgttaatagttttgatgttatagaagttagggtta 12151053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 13522353 - 13522385
Alignment:
Q  99 ttgttagttttgatgttatagaaattagggtta 131  Q
    |||||| ||||||||||||||||||||||||||    
T  13522353 ttgttaattttgatgttatagaaattagggtta 13522385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 16050984 - 16050916
Alignment:
Q  20 taacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    |||||||||||||||||| || || |||||||||||  |  ||||||| |||||||||  |||||||||    
T  16050984 taacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaac 16050916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 17541498 - 17541434
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  17541498 gatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 48043477 - 48043539
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||||||||| | |||| |||||||||||||| || ||||||| ||||| ||||||||||    
T  48043477 ctaaggtaagggtgtaactagc-ttctctaataatggatt-tataattttgaaatagggtttaac 48043539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 158; Significance: 4e-84; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 15605 - 15813
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || || ||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  15605 atcatctaatctaaggtaagggtgggactaactt-ctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatg 15703  T
Q  114 ttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtgga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  15704 ttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacacataagtgaatatatgtataaagtgattattgtgga 15803  T
Q  214 ttaaattggt 223  Q
    || |||||||    
T  15804 tttaattggt 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 15934 - 16003
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  15934 aaattggtgaagtataacgttattgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 2073 - 1876
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2073 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 1974  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  1973 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 1755 - 1699
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 272  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  1755 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 156; Significance: 7e-83; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 186195 - 186392
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186195 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 186294  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||    
T  186295 tagggttagatttcgttcataatctttt-tataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggt 186392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 186513 - 186569
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttt 272  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  186513 aaatttgtgaagtataatgttgttgttgatgaattcacttctgatcgttgttgtttt 186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5281 - 5488
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || |||||||||||  |  ||||||||||||| ||||||||||||||||||||||||||    
T  5281 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgtt 5380  T
Q  101 gttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaag 200  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||    
T  5381 gttcgttttgatgttatagatattagggttagatttcattcataatcttttgtataatctccttttctacttcaacccataagtgcttatttgtataaag 5480  T
Q  201 tgattatt 208  Q
    ||||||||    
T  5481 tgattatt 5488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5184 - 5220
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtg 37  Q
    |||| ||||||||||||||||||||||||||||||||    
T  5184 gtagaaccttgcgatcatctaacctaaggtaagggtg 5220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 17520 - 17719
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||  || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17520 ctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgctgttatagaaat 17619  T
Q  124 tagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  17620 tagggttatatttcattcataatcttttgtacaatcactttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggt 17719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 12 - 222
Target Start/End: Original strand, 17927 - 18137
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17927 cgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttga 18026  T
Q  112 tgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 211  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  18027 tgttatagaaattagggttagatttcattcataatattttgtttaatctctttttttacttctacccataagtgcttatttgtataaagtgattattgtg 18126  T
Q  212 gattaaattgg 222  Q
     ||| ||||||    
T  18127 aatttaattgg 18137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 2445 - 2652
Alignment:
Q  16 catctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaag--ggtttaaccttgtagttgttgttagttttgatg 113  Q
    |||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||| ||||||||||||    
T  2445 catctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaatggtttaaccttgtagtcgttattagttttgatg 2544  T
Q  114 ttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtgga 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |  |||||||||||||||||||||    
T  2545 ttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtg--tctacgtataaagtgattattgtgga 2642  T
Q  214 ttaaattggt 223  Q
    || |||||||    
T  2643 tttaattggt 2652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 222
Target Start/End: Original strand, 61835 - 62048
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    ||||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||| || |||||||||||||||||||||||||||||    
T  61835 cgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa-ggatttaaccttgtagttgttgttagttttga 61933  T
Q  112 tgttata----gaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattat 207  Q
    |||||||    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  61934 tgttatatatagaaattagggttagatttcattcataatcttttgtttaatctctttttctacttctacctataagtgcttatttgtataaagtgattat 62033  T
Q  208 tgtggattaaattgg 222  Q
    |||||||| ||||||    
T  62034 tgtggatttaattgg 62048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 23932 - 24080
Alignment:
Q  75 aaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttct 174  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23932 aaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttct 24031  T
Q  175 acccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||||||  ||| |||||||||||||||||||||||| |||||||    
T  24032 acccataagtgactatatgtataaagtgattattgtggatttaattggt 24080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 11147 - 11359
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagtttt 109  Q
    |||||| ||||  |||||||||| || || |||||||||||||||||||||||||| ||||| |||| ||||||| | | || ||||||  |||||||||    
T  11147 cgatcacctaatttaaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttatcat-gttgttgttttgttagtttt 11245  T
Q  110 gatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattg 209  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  11246 gatgttatataaattagggttagatttcattcataatcttttgtataatctctttttcttcttctacccataagtgtctatttgtataaagtgattattg 11345  T
Q  210 tggattaaattggt 223  Q
    ||| || |||||||    
T  11346 tgggtttaattggt 11359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 2945 - 2831
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 112  Q
    |||||| ||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2945 gatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgat 2846  T
Q  113 gttatagaaattagg 127  Q
    ||||||| |||||||    
T  2845 gttataggaattagg 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 2828 - 2762
Alignment:
Q  65 tataattctgaaaaagggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||| |||| ||||||||| |  ||| ||| |||||| |||||||||||||||||||||||||    
T  2828 tataattctaaaaaggggtttaacatgttgtcgtt-ttgttacttttgatgttatagaaattagggtt 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 1128 - 1022
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatt 124  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgttttagaaatt 1029  T
Q  125 agggtta 131  Q
    | |||||    
T  1028 atggtta 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 14575 - 14689
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  14575 atcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatg 14674  T
Q  114 -ttatagaaattagg 127  Q
     ||| ||||||||||    
T  14675 attagagaaattagg 14689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 23633 - 23747
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg 113  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  23633 atcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatg 23732  T
Q  114 -ttatagaaattagg 127  Q
     ||| ||||||||||    
T  23733 attagagaaattagg 23747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 4999 - 4878
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaacctt-gtagttgttgttagttttgat 112  Q
    |||||||||  ||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  4999 atcatctaatataaggtaagggtgggactagctttctctaataatgg-ttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgat 4901  T
Q  113 gttatagaaattagggttagatt 135  Q
    |||||||  ||||||||||||||    
T  4900 gttatagtgattagggttagatt 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 79; Significance: 6e-37; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 16418 - 16528
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaa 122  Q
    |||||||||||||| || || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  16418 ctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaa 16517  T
Q  123 ttagggttaga 133  Q
    |||||||||||    
T  16518 ttagggttaga 16528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 18700 - 18811
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatg-ttatagaa 121  Q
    ||||||| |||||| || || ||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||||| ||  ||||| ||| ||||    
T  18700 ctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggtttagccttgtagttgttgttaggtcatgatgattagagaa 18799  T
Q  122 attagggttaga 133  Q
    ||||||||||||    
T  18800 attagggttaga 18811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 18902 - 18962
Alignment:
Q  70 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    |||||||||| |||||||  |||||||||||| ||||||||||| ||||||| ||||||||    
T  18902 ttctgaaaaaaggtttaattttgtagttgttgatagttttgatgctatagaagttagggtt 18962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 16619 - 16679
Alignment:
Q  70 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||| ||||||  || ||||||||| ||||||||||| ||||||| ||||||||    
T  16619 ttctgaaaaagagtttaattttatagttgttgatagttttgatgctatagaagttagggtt 16679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 14002 - 13893
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | | |||    
T  14002 ctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttgttagttttgatgttttgggaat 13903  T
Q  124 tagggttaga 133  Q
    |||| |||||    
T  13902 taggtttaga 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 2176 - 2287
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || ||  ||||||||||  |  ||||||||||||||||||||||||||||||||||||||||    
T  2176 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 2275  T
Q  101 gttagttttgat 112  Q
    ||||||||||||    
T  2276 gttagttttgat 2287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 18627 - 18749
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgta-taattctgaaaaagggtttaaccttgtagttgttgttagttttg 110  Q
    ||||||||||| |||||||||||||| || |||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||    
T  18627 cgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgttagttttg 18726  T
Q  111 atgttatagaaattagggttaga 133  Q
    ||||| | | ||||||| |||||    
T  18727 atgttttgggaattaggtttaga 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26803 - 26669
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||   || ||| |||||||||| || || |||||||||||  | ||||||||||||||||||||||||||||| |||||||||||    
T  26803 gtagaaccttgcgatcaatcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaactttgtagttgtt 26704  T
Q  101 gttagttttgatgttatagaaattagggttagatt 135  Q
    ||||| |||||||||||||| ||||||||||||||    
T  26703 gttagctttgatgttatagagattagggttagatt 26669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 23626 - 23564
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||| |||||||||||||  |||||||||||  ||||||||||||||||||| |||||    
T  23626 tataattctaaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagttagg 23564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 19272 - 19154
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 111  Q
    |||| |||||| |||| ||||||||| || || |||||||||||  |  |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19272 cgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttattagttttga 19173  T
Q  112 tgttatagaaattagggtt 130  Q
    |||||||||||| ||||||    
T  19172 tgttatagaaataagggtt 19154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 19160 - 19115
Alignment:
Q  78 aagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  19160 aagggtttaaccttgtagttgttgatagttttgatgttatagaaat 19115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8722 - 8853
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaacc--ttgtagttg 98  Q
    |||| ||||| ||||||||||| |||||||||||||| || |||||| ||||||||||||||||||| ||||| |||| ||||| ||||  |||| |||     
T  8722 gtagaaccttccgatcatctaatctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggttgaacctattgttgtt- 8820  T
Q  99 ttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||||||||||||||||||||||||||||    
T  8821 ttgttagttttgatgttatagaaattagggtta 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 5698 - 5578
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctga--aaaagggtttaaccttgtagttgttgtta-gttt 108  Q
    |||||||||||  ||||||||||||| || ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||  || ||||    
T  5698 cgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttt 5599  T
Q  109 tgatgttatagaaattagggtt 130  Q
    ||||||| ||| ||||||||||    
T  5598 tgatgttgtag-aattagggtt 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 19921 - 19801
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagtttt 109  Q
    ||||||||||| |||||||||||||  || ||| |||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||    
T  19921 cgatcatctaatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagtttt 19823  T
Q  110 gatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||    
T  19822 gatgttatagaaattagggtta 19801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 5517 - 5445
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggttta 86  Q
    ||||||||| |||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||    
T  5517 atcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 11681 - 11590
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    |||||||||||  |||| |||||||| || ||  ||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||    
T  11681 cgatcatctaatgtaagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacatcgttgttgttgtt 11590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 11011 - 10893
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttg 110  Q
    ||||||||||  |||||||||||||  | |||||||||||||||||||||||||| ||||| ||||||||||||||   |||| ||| ||||||||||||    
T  11011 gatcatctaatataaggtaagggtggaactagctttctctaataatgggttgtatgattct-aaaaagggtttaacatgttgttgtt-ttgttagttttg 10914  T
Q  111 atgttatagaaattagggtta 131  Q
    |||||||||||||||||||||    
T  10913 atgttatagaaattagggtta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 127332 - 127450
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttga 111  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| |||||| ||||| |||| |||||||||   |||| ||| |||||||||||||    
T  127332 atcatctaatctaaggtaagggtgggactagctttctctaataatggattgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttga 127430  T
Q  112 tgttatagaaattagggtta 131  Q
    ||||||||| ||||||||||    
T  127431 tgttatagagattagggtta 127450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 305 - 236
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  305 aaattggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgttatgagatgt 236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 420 - 361
Alignment:
Q  42 tagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  420 tagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 2300 - 2221
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  2300 ctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaacatagttgttgttgtt 2221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 28564 - 28493
Alignment:
Q  65 tataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 135  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  28564 tataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgttatagagattagggttagatt 28493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 40160 - 40052
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaa 121  Q
    ||||||||||| || || || ||||||||||||||||||||||| ||||| |||| |||||||||   |||| ||| |||||||||||||||||||||||    
T  40160 ctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttagttttgatgttatagaa 40062  T
Q  122 attagggtta 131  Q
    ||||||||||    
T  40061 attagggtta 40052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 5e-22; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 66061 - 66150
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    ||||||||  |||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||    
T  66061 atcatctattctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 66150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 75998 - 75885
Alignment:
Q  16 catctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatg 113  Q
    ||||||| |||||||||||||| || |||||||||| ||||||||||||||| ||||| |||| |||||||||   |||| ||| || ||||||||||||    
T  75998 catctaatctaaggtaagggtgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttattagttttgatg 75900  T
Q  114 ttatagaaattaggg 128  Q
    |||||  ||||||||    
T  75899 ttataagaattaggg 75885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 111413 - 111344
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgt 93  Q
    |||||||||||||| |  |||||||||||||||||||||||||| ||||| |||| ||||||||| ||||    
T  111413 ctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaacattgt 111344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 73148 - 73032
Alignment:
Q  16 catctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatg 113  Q
    |||||||  ||||||||||||| || || ||||||||||||||| ||||||| ||||| |||| |||||||||   |||| ||| || |||||||| |||    
T  73148 catctaatgtaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttgttgtt-ttattagtttttatg 73050  T
Q  114 ttatagaaattagggtta 131  Q
    |||||  |||||||||||    
T  73049 ttataagaattagggtta 73032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 328264 - 328318
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaat 55  Q
    |||| |||||||||||||||||||||||||||||||| || || |||||||||||    
T  328264 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaactttctctaat 328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 23587 - 23503
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 108  Q
    |||||||||||||  || |||||||||||||||||||||||||||| ||| |||| ||||| ||||||| |||||||||||||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggttaaaccttgcagttgttgttagttt 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 40204 - 40268
Alignment:
Q  66 ataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  40204 ataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgttatagaagttagggtt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 6396 - 6529
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaacctt-gtagttgt 99  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||  |||| ||  ||  | ||||||| ||||||||||||||||| ||||||||    
T  6396 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttcattaatcataagta-tgtaattct-aaaaagggtttaacctttgtagttgt 6493  T
Q  100 tgttagttttgatgttatagaaattagggttagatt 135  Q
    ||||||||||||||||||||| |||| || ||||||    
T  6494 tgttagttttgatgttatagagattatggctagatt 6529  T

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Target: scaffold0108 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 6494 - 6395
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| ||||||||||||   || |||||||||||||  || |||||||||||||||||| ||||| |||||||||||||||| |||| ||||||||||||    
T  6494 gtagaaccttgcgatcaatcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagttgtt 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 59695 - 59757
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  59695 tataattctgaaaaagggtttaactttgtagttgttgatagttttgatattatagaaattagg 59757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 10516 - 10447
Alignment:
Q  216 aaattggtaaagtataatgttgttgttgatgaattcacttctgattgttgttgtttttgtcatgtgatgt 285  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  10516 aaattggcgaagtataatgttgttgttgatgaattcacttctgattgttcttgtttttgttatgagatgt 10447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 10630 - 10572
Alignment:
Q  42 tagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 101  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||    
T  10630 tagctttctctaaagatgg-ttgtataattctgaaaaagggtttaacattgtagttgttg 10572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 38441 - 38543
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    ||||||||||||||||| || | |||| |||| ||| ||  |||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |    
T  38441 ctaaggtaagggtgtgactaaccttctttaatcatgagta-tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagt 38539  T
Q  124 tagg 127  Q
    ||||    
T  38540 tagg 38543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 35185 - 35264
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    ||||||||||||||  | |||||||| ||||||||||||||||||||||| |||||||||||||| | || |||||||||    
T  35185 ctaaggtaagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaacatggttgttgttgtt 35264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 35490 - 35597
Alignment:
Q  29 gtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgat-gttatagaaattag 126  Q
    ||||||||| || |||||| ||||||| ||||||| ||||||||||||| |||||||||| | || ||||||||| | ||||||| |||| |||||||||    
T  35490 gtaagggtgggattagctt-ctctaatgatgggtt-tataattctgaaatagggtttaacatggttgttgttgtttgattttgatggttagagaaattag 35587  T
Q  127 ggttagattt 136  Q
    | || |||||    
T  35588 gttttgattt 35597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 35341 - 35413
Alignment:
Q  29 gtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 103  Q
    ||||||||| || |||||| ||||||| ||||||| ||||||||||||| |||||||||| | || |||||||||    
T  35341 gtaagggtgggattagctt-ctctaatgatgggtt-tataattctgaaatagggtttaacatggttgttgttgtt 35413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 3257 - 3155
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || | |||| |||| ||| ||  ||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||| |    
T  3257 ctaaggtaagggtgggactaaccttctttaatcatgagta-tataattatgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagt 3159  T
Q  124 tagg 127  Q
    ||||    
T  3158 tagg 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 6494 - 6568
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    ||||||||| ||||||||| || | || || ||||||||||||||||||||||| |||||||||| |||||||||    
T  6494 atcatctaatctaaggtaaaggcgggactacctttctctaataatgggttgtatgattctgaaaaggggtttaac 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 421 - 293
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || ||   |||| |||| ||  ||  | |||| |||||||||||||||||||||||||||||    
T  421 gtagaaccttgcgatcatctaacctaaggtaagggtgagattaatcttctttaatcataagta-tgtaatcctgaaaaagggtttaaccttgtagttgtt 323  T
Q  101 gtta-gttttgatgttatagaaattagggtt 130  Q
      || ||||||||||| ||| ||||||||||    
T  322 aataggttttgatgttgtag-aattagggtt 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 43786 - 43898
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 121  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||||||||| |||||||||| | || |||||| |||| |||||||| ||| ||||    
T  43786 ctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattctgaaatagggtttaacatggttgttgttattagattttgatgattagagaa 43883  T
Q  122 attagggttagattt 136  Q
    |||||| || |||||    
T  43884 attaggttttgattt 43898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 4492 - 4369
Alignment:
Q  6 accttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta- 104  Q
    |||||||||||||||||||||||||||||||| || || | |||| |||| ||  | | |||||| | |||||| ||||||||||||||||||||  ||     
T  4492 accttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatataatcccgaaaaaaggtttaaccttgtagttgttaatag 4394  T
Q  105 gttttgatgttatagaaattagggtt 130  Q
    ||||||||||| ||| ||||||||||    
T  4393 gttttgatgttgtag-aattagggtt 4369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 12288 - 12256
Alignment:
Q  99 ttgttagttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||||| |||||    
T  12288 ttgttagttttgatgttatagaaattaaggtta 12256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9904 - 9999
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagtt 97  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||| |||| ||  | | | |||||||||||||||||||| ||||||||||    
T  9904 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatgtaattctgaaaaagggtttagccttgtagtt 9999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8897 - 8799
Alignment:
Q  1 gtaggaccttgcgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 100  Q
    |||| |||||||||||||||||||||||||||||||| || || | |||| |||| ||  | | | |||| |||||||||||||||||||||||| ||||    
T  8897 gtagaaccttgcgatcatctaacctaaggtaagggtgggactaaccttctttaatcataag-tatgtaatcctgaaaaagggtttaaccttgtagatgtt 8799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 7513 - 7615
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || | |||| |||| ||| ||  ||| |||||||||||||||||||  || ||||||||| ||||||||||||||||||| |    
T  7513 ctaaggtaagggtgggactaaccttctttaattatgagta-tatgattctgaaaaagggtttaattttatagttgttgatagttttgatgttatagaagt 7611  T
Q  124 tagg 127  Q
    ||||    
T  7612 tagg 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 28726 - 28660
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||  |||||||| |||||||||||    
T  28726 tataattctgaaaaagcgtttaatcttgtagttgttaatagttttattgttataggaattagggtta 28660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 17118 - 17057
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  17118 tataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattatagaaattagg 17057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 26649 - 26588
Alignment:
Q  65 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  26649 tataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattatagaaattagg 26588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 135 - 74
Alignment:
Q  70 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 131  Q
    |||||||||||||||| |  |||||||||||  ||||||||||||||||||| |||||||||    
T  135 ttctgaaaaagggttttaatttgtagttgttaatagttttgatgttatagaagttagggtta 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 1313 - 1264
Alignment:
Q  81 ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  1313 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 6819 - 6770
Alignment:
Q  81 ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  6819 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 5615 - 5718
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatg-ttatagaa 121  Q
    |||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||| |||||| | || ||||||||| | |||||||| ||| ||||    
T  5615 ctaaggtaagggtgggactagctt-ctctaataatgggtt-tataattctgaaataggatttaacatggttgttgttgtttgattttgatgattagagaa 5712  T
Q  122 attagg 127  Q
    ||||||    
T  5713 attagg 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 8907 - 8843
Alignment:
Q  14 atcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaa 78  Q
    ||||||||| ||||| |||||||| || ||||||| ||||||||||| |||||| ||||||||||    
T  8907 atcatctaatctaagttaagggtgggactagctttatctaataatggattgtatgattctgaaaa 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 68725 - 68789
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaac 88  Q
    |||||||||||||| || || ||||||||||||||||||| ||| ||||| |||| |||||||||    
T  68725 ctaaggtaagggtgggactacctttctctaataatgggttatatgattctaaaaacgggtttaac 68789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 377 - 438
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 133  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  377 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 11316 - 11227
Alignment:
Q  134 tttcattcataatcttttgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtggattaaattggt 223  Q
    |||||||||||||| ||||||||||||| |||| | |||  |  || |||||| |||||||  ||||||||||||||| ||| |||||||    
T  11316 tttcattcataatcgtttgtataatctcctttttttcttaaattcaaaagtgcttatttgtgaaaagtgattattgtgaatttaattggt 11227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12520 - 12585
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| | |||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  12520 cgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaa 12585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 49741 - 49680
Alignment:
Q  66 ataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    ||||||||||||||||||||||  || |  |||||| ||||||||||||||||||| |||||    
T  49741 ataattctgaaaaagggtttaattttatttttgttgatagttttgatgttatagaagttagg 49680  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 32059 - 31994
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  |||||||||||||||| || |||||||||||  |  |||||||||||||||||    
T  32059 cgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 31994  T

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Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 37366 - 37301
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  |||||||||||||||| || |||||||||||  |  |||||||||||||||||    
T  37366 cgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 37301  T

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Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 77751 - 77687
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||| |||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  77751 gatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 77687  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 174232 - 174169
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  174232 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 174169  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 143663 - 143611
Alignment:
Q  25 taaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||||||| || |||||||||||  |  |||||||||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 143611  T

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Target: scaffold1800 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 660 - 558
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaat 123  Q
    |||||||||||||| || || | |||| |||| ||| ||  ||||||||| ||||| |||||||  |||| ||||||| || |||||||||||||||| |    
T  660 ctaaggtaagggtgggactaaccttctttaatcatgagtc-tataattcttaaaaatggtttaattttgttgttgttgataattttgatgttatagaagt 562  T
Q  124 tagg 127  Q
    ||||    
T  561 tagg 558  T

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Target: scaffold0461 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 12464 - 12433
Alignment:
Q  99 ttgttagttttgatgttatagaaattagggtt 130  Q
    ||||||||||||||||||||||||||||||||    
T  12464 ttgttagttttgatgttatagaaattagggtt 12433  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 29316 - 29257
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 131  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| |||| |||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattaaggtta 29257  T

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Target: scaffold0165 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 31938 - 31880
Alignment:
Q  69 attctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 127  Q
    |||||||||||||||||||  || ||||||||  ||||||||||||| ||||| |||||    
T  31938 attctgaaaaagggtttaattttatagttgttaatagttttgatgttgtagaagttagg 31880  T

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Target: scaffold1633 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 1270 - 1205
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  1270 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

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Target: scaffold0956 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 2620 - 2555
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||| ||| |||||||||| || || |||||||||||  |  |||||||||||||||||    
T  2620 cgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 2555  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 2942 - 2889
Alignment:
Q  24 ctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||||| || || |||||||||||  | ||||||||||||||||||    
T  2942 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 2889  T

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Target: scaffold0112; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 13488 - 13406
Alignment:
Q  130 tagatttcattcataatcttt--tgtataatctctttttctacttctacccataagtgcatatttgtataaagtgattattgtg 211  Q
    |||||||||||||||||||||    ||||||||| |||||||||| ||  || |||||| |||||||| ||||| |||||||||    
T  13488 tagatttcattcataatctttaagttataatctc-ttttctacttatattcaaaagtgcttatttgtaaaaagttattattgtg 13406  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 79114 - 79049
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  79114 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 79049  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 78172 - 78237
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  78172 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 24118 - 24183
Alignment:
Q  12 cgatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    |||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  24118 cgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

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Target: scaffold1283 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 456 - 520
Alignment:
Q  13 gatcatctaacctaaggtaagggtgtgaatagctttctctaataatgggttgtataattctgaaa 77  Q
    ||||||||||  ||||||||||||| || || |||||||||||  |  |||||||||||||||||    
T  456 gatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

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Target: scaffold0630 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 9074 - 9011
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||| ||| ||||||||||    
T  9074 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattagggtt 9011  T

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Target: scaffold0371 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 10487 - 10550
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| ||||||||||||||||| |||||||||||  || ||||||||||| ||| ||||||||||    
T  10487 taatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtag-aattagggtt 10550  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 8129 - 8085
Alignment:
Q  73 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgtta 116  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtta 8085  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 62729 - 62666
Alignment:
Q  67 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 130  Q
    |||| |||||||||||||||||||||| ||||||  || ||||||||||| ||| ||||||||||    
T  62729 taatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtag-aattagggtt 62666  T

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