View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12048_low_7 (Length: 497)

Name: NF12048_low_7
Description: NF12048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12048_low_7
NF12048_low_7
[»] chr7 (18 HSPs)
chr7 (107-480)||(28382768-28383141)
chr7 (108-477)||(28387125-28387493)
chr7 (7-96)||(16403234-16403322)
chr7 (7-96)||(28506138-28506226)
chr7 (1-96)||(40442681-40442776)
chr7 (1-62)||(10588297-10588358)
chr7 (1-82)||(15210664-15210745)
chr7 (37-96)||(38226654-38226713)
chr7 (4-62)||(34200035-34200092)
chr7 (1-82)||(27848586-27848668)
chr7 (1-59)||(11996820-11996879)
chr7 (7-62)||(15144858-15144914)
chr7 (7-62)||(15164438-15164494)
chr7 (7-62)||(15755763-15755818)
chr7 (17-58)||(9508459-9508500)
chr7 (7-91)||(12317419-12317505)
chr7 (25-63)||(17736806-17736844)
chr7 (67-96)||(3565161-3565190)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-96)||(121033-121128)
scaffold0021 (1-82)||(174006-174088)
[»] chr5 (18 HSPs)
chr5 (1-96)||(13024536-13024631)
chr5 (1-96)||(13094720-13094815)
chr5 (1-96)||(21998350-21998445)
chr5 (1-82)||(19661645-19661726)
chr5 (1-62)||(24492808-24492869)
chr5 (1-82)||(21293776-21293857)
chr5 (41-82)||(37723145-37723186)
chr5 (7-82)||(17409744-17409821)
chr5 (37-96)||(25418714-25418772)
chr5 (37-96)||(25430608-25430667)
chr5 (66-96)||(1095683-1095713)
chr5 (66-96)||(9077157-9077187)
chr5 (16-96)||(16673421-16673503)
chr5 (67-96)||(18417313-18417342)
chr5 (8-62)||(20804823-20804880)
chr5 (16-96)||(33408498-33408580)
chr5 (7-60)||(20766246-20766302)
chr5 (68-96)||(22109344-22109372)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-96)||(168788-168884)
[»] chr4 (16 HSPs)
chr4 (1-96)||(16240771-16240866)
chr4 (1-96)||(16271004-16271099)
chr4 (1-96)||(15614305-15614400)
chr4 (1-96)||(3095596-3095693)
chr4 (1-82)||(12901999-12902081)
chr4 (1-89)||(16596408-16596498)
chr4 (1-62)||(7798016-7798077)
chr4 (1-82)||(14054087-14054169)
chr4 (1-82)||(17045728-17045810)
chr4 (7-62)||(44052097-44052152)
chr4 (1-96)||(52874020-52874115)
chr4 (432-480)||(28657519-28657567)
chr4 (66-96)||(15366901-15366931)
chr4 (66-96)||(15369230-15369260)
chr4 (66-96)||(15372738-15372768)
chr4 (66-96)||(15375027-15375057)
[»] chr2 (18 HSPs)
chr2 (1-96)||(23285644-23285739)
chr2 (5-95)||(8945871-8945960)
chr2 (1-82)||(23655198-23655280)
chr2 (1-62)||(22336373-22336434)
chr2 (1-62)||(23040980-23041040)
chr2 (7-86)||(38917-38995)
chr2 (1-82)||(27345206-27345290)
chr2 (1-82)||(20321887-20321969)
chr2 (1-82)||(23104193-23104275)
chr2 (1-82)||(23072760-23072842)
chr2 (7-82)||(21319461-21319537)
chr2 (7-82)||(21328392-21328468)
chr2 (1-82)||(23110767-23110849)
chr2 (1-62)||(23657071-23657133)
chr2 (50-96)||(24672749-24672795)
chr2 (1-52)||(18787580-18787632)
chr2 (66-96)||(24679374-24679404)
chr2 (7-82)||(19692391-19692468)
[»] scaffold1172 (1 HSPs)
scaffold1172 (1-96)||(2049-2144)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-96)||(31729-31824)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-96)||(29923-30018)
[»] chr1 (7 HSPs)
chr1 (1-96)||(21302349-21302444)
chr1 (7-96)||(27240595-27240682)
chr1 (1-62)||(20134429-20134490)
chr1 (1-62)||(27251541-27251606)
chr1 (43-82)||(38802220-38802259)
chr1 (66-96)||(20915483-20915513)
chr1 (7-82)||(30643692-30643769)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-96)||(12243-12340)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-96)||(12309-12406)
[»] scaffold0120 (4 HSPs)
scaffold0120 (1-96)||(15369-15464)
scaffold0120 (5-62)||(18141-18198)
scaffold0120 (5-61)||(33782-33838)
scaffold0120 (5-61)||(45167-45223)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-96)||(225798-225895)
[»] scaffold0427 (1 HSPs)
scaffold0427 (7-96)||(12729-12817)
[»] chr8 (18 HSPs)
chr8 (7-96)||(31970530-31970618)
chr8 (1-92)||(7371996-7372086)
chr8 (1-82)||(5867049-5867131)
chr8 (1-89)||(21248615-21248705)
chr8 (1-89)||(21254441-21254531)
chr8 (1-82)||(45131801-45131882)
chr8 (1-62)||(23647869-23647930)
chr8 (7-62)||(18880027-18880082)
chr8 (1-62)||(21919755-21919817)
chr8 (1-58)||(18819231-18819288)
chr8 (1-62)||(22625973-22626034)
chr8 (7-62)||(17140177-17140232)
chr8 (39-96)||(23405676-23405732)
chr8 (6-62)||(21396777-21396837)
chr8 (6-62)||(21791270-21791330)
chr8 (7-84)||(15603768-15603847)
chr8 (66-96)||(19802655-19802685)
chr8 (66-96)||(19904733-19904763)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-96)||(26240-26335)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-96)||(31371-31466)
[»] scaffold0358 (2 HSPs)
scaffold0358 (5-96)||(3933-4025)
scaffold0358 (7-96)||(10232-10322)
[»] scaffold0146 (2 HSPs)
scaffold0146 (1-96)||(29638-29733)
scaffold0146 (1-96)||(31980-32075)
[»] scaffold0266 (1 HSPs)
scaffold0266 (7-96)||(22219-22307)
[»] scaffold0161 (1 HSPs)
scaffold0161 (7-96)||(3200-3287)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-96)||(31295-31390)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-62)||(7729-7790)
[»] scaffold1655 (1 HSPs)
scaffold1655 (4-89)||(610-697)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-59)||(16908-16966)
[»] chr6 (18 HSPs)
chr6 (1-82)||(35244817-35244898)
chr6 (7-96)||(19398833-19398921)
chr6 (1-82)||(16921429-16921511)
chr6 (1-62)||(29059788-29059849)
chr6 (6-62)||(21760760-21760816)
chr6 (1-81)||(22830751-22830832)
chr6 (1-62)||(19304320-19304381)
chr6 (7-60)||(25607298-25607351)
chr6 (4-84)||(25630168-25630249)
chr6 (6-62)||(11183554-11183610)
chr6 (7-59)||(25604207-25604259)
chr6 (7-59)||(25612545-25612597)
chr6 (7-62)||(1560557-1560612)
chr6 (4-62)||(4739330-4739391)
chr6 (7-82)||(18179743-18179821)
chr6 (16-96)||(22603909-22603991)
chr6 (1-52)||(13018713-13018765)
chr6 (432-480)||(34518815-34518863)
[»] chr3 (21 HSPs)
chr3 (1-62)||(26682594-26682655)
chr3 (37-96)||(15458625-15458684)
chr3 (1-62)||(10901971-10902032)
chr3 (1-62)||(18437774-18437835)
chr3 (1-58)||(43840183-43840240)
chr3 (1-96)||(17498563-17498659)
chr3 (47-96)||(43840107-43840156)
chr3 (4-62)||(30025328-30025387)
chr3 (4-62)||(30027811-30027870)
chr3 (7-91)||(2898566-2898652)
chr3 (1-62)||(14577617-14577678)
chr3 (40-92)||(17487075-17487127)
chr3 (4-62)||(30024060-30024119)
chr3 (4-62)||(30029080-30029139)
chr3 (1-62)||(23083932-23083996)
chr3 (7-96)||(26197217-26197308)
chr3 (5-58)||(14571877-14571930)
chr3 (44-96)||(21606863-21606915)
chr3 (7-83)||(23078177-23078255)
chr3 (7-96)||(3832942-3833033)
chr3 (7-96)||(51694755-51694846)
[»] scaffold0647 (1 HSPs)
scaffold0647 (7-62)||(6878-6933)
[»] scaffold0305 (1 HSPs)
scaffold0305 (7-62)||(19943-19998)
[»] scaffold0071 (1 HSPs)
scaffold0071 (37-96)||(3507-3566)
[»] scaffold0309 (1 HSPs)
scaffold0309 (9-82)||(13124-13197)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-82)||(193792-193873)
[»] scaffold1098 (1 HSPs)
scaffold1098 (1-62)||(2371-2432)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-62)||(36589-36650)
[»] scaffold0051 (1 HSPs)
scaffold0051 (5-62)||(65784-65841)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-62)||(78162-78223)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-62)||(25187-25248)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-82)||(4629-4711)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-82)||(1805-1887)
[»] scaffold0042 (1 HSPs)
scaffold0042 (7-62)||(24897-24952)
[»] scaffold0964 (1 HSPs)
scaffold0964 (4-62)||(3478-3536)
[»] scaffold0490 (1 HSPs)
scaffold0490 (9-82)||(1190-1263)
[»] scaffold0395 (2 HSPs)
scaffold0395 (5-96)||(5636-5719)
scaffold0395 (5-62)||(15474-15531)
[»] scaffold0175 (1 HSPs)
scaffold0175 (7-60)||(33381-33435)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-62)||(47233-47294)
[»] scaffold0032 (1 HSPs)
scaffold0032 (6-59)||(50839-50892)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-62)||(127997-128058)
[»] scaffold0423 (1 HSPs)
scaffold0423 (7-58)||(562-613)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-82)||(16274-16357)
scaffold0114 (1-82)||(26423-26506)
[»] scaffold0848 (1 HSPs)
scaffold0848 (1-82)||(3945-4026)
[»] scaffold0216 (1 HSPs)
scaffold0216 (7-82)||(17915-17993)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-82)||(46236-46317)
[»] scaffold0825 (1 HSPs)
scaffold0825 (7-58)||(443-494)
[»] scaffold0193 (1 HSPs)
scaffold0193 (7-62)||(12481-12535)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-62)||(340773-340828)
[»] scaffold0094 (1 HSPs)
scaffold0094 (1-82)||(612-693)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-49)||(119565-119614)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-96)||(14555-14637)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-82)||(5926-6008)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-82)||(525-607)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-52)||(118463-118515)
[»] scaffold0411 (1 HSPs)
scaffold0411 (32-82)||(9711-9762)
[»] scaffold1551 (1 HSPs)
scaffold1551 (66-96)||(1354-1384)
[»] scaffold1459 (1 HSPs)
scaffold1459 (7-82)||(21-99)
[»] scaffold1061 (1 HSPs)
scaffold1061 (8-82)||(150-224)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-82)||(11224-11305)
[»] scaffold0084 (1 HSPs)
scaffold0084 (66-96)||(9508-9538)
[»] scaffold0080 (1 HSPs)
scaffold0080 (7-82)||(17267-17345)
[»] scaffold0001 (1 HSPs)
scaffold0001 (7-82)||(198041-198119)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-52)||(104479-104531)
[»] scaffold0036 (1 HSPs)
scaffold0036 (7-82)||(67172-67249)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-52)||(73125-73177)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-52)||(266656-266708)


Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 107 - 480
Target Start/End: Complemental strand, 28383141 - 28382768
Alignment:
Q  107 cttcaaacaaaataataaagagcatccaagaaaaagtttaagtgtttcataaggcatgttacaatttggtcgctacgggaaggaaggctttcgctccact 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||    
T  28383141 cttcaaacaaaataataaagagcatccaagaaaaagtttaagggtttcataaggcatgttacaatttggtttctacgggaaggaaggctttggctccact 28383042  T
Q  207 aacattgattctagaattataattaagaaagataataatgtagtacttacttggggattaaccctgaaatgactcttatttgcttgtcccatctcttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28383041 aacattgattctagaattataattaagaaagataataatgtagtacttacttggggattaaccctgaaatgactcttatttgcttgtcccatctcttgtt 28382942  T
Q  307 tctcgttttaagttctatatctttcattacgtgtttctctctattttttaaacgtgttatcagtaatgaatgactgagagggaaaaaggaaactgacatt 406  Q
    |||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |    
T  28382941 tctccttccaagttctatatctttcattacgtgtttctctctattttttaaatgtgttatcagtaatgaatgactgagagggaaaaaggaaaccgacagt 28382842  T
Q  407 tattcatagagtgcaaccccctaccaacttccttcctaaaatagtggaactaaatcatggattgggaagtggtg 480  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  28382841 tattcatagagtgcaaccccctaccaacttccttcctaaaatagtggaactaaatcatggagtggaaagtggtg 28382768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 108 - 477
Target Start/End: Complemental strand, 28387493 - 28387125
Alignment:
Q  108 ttcaaacaaaataataaagagcatccaagaaaaagtttaagtgtttcataaggcatgttacaatttggtcgctacgggaaggaaggctttcgctccacta 207  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||    
T  28387493 ttcaaacaaaataataaagagcatccaagaaaaggcttaagggtttcataaggcatgttacaaattggtctctacgggaaggaagggtttggttccacta 28387394  T
Q  208 acattgattctagaattataattaagaaagataataatgtagtacttacttggggattaaccctgaaatgactcttatttgcttgtcccatctcttgttt 307  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  28387393 gcattgattctagaattataattaagaaagataataatgtagtatttaattggggattaatc-tgaaatgactcttatttgcttgtcccttctcttgttt 28387295  T
Q  308 ctcgttttaagttctatatctttcattacgtgtttctctctattttttaaacgtgttatcagtaatgaatgactgagagggaaaaaggaaactgacattt 407  Q
    ||| || |||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| ||| |||| ||    
T  28387294 ctccttctaagttttatatctttcattacgtgtttctctctattttttaaatgtgatatcagtaatgaatgactgagaggaaaaaagggaacggacaatt 28387195  T
Q  408 attcatagagtgcaaccccctaccaacttccttcctaaaatagtggaactaaatcatggattgggaagtg 477  Q
    |||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  28387194 attcatagagtgtaaccctctatcaacttccttcctaaaataatggaactaaatcatggagtggaaagtg 28387125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 16403234 - 16403322
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  16403234 tgaaggataaattattatttatctatttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 16403322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 28506138 - 28506226
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  28506138 tgaaggataaattattatttatctatttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 28506226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40442776 - 40442681
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||| |||| |||||||||| |||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  40442776 ttatgttgaaggataaataattagttatctattttgagatttt-aagaagtgtgatattccgttatatgttgtttactctgataaatgtttatgaaa 40442681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10588358 - 10588297
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  10588358 ttatgttgaaggataaattattatttatctatttgaaatttttaagaagtgtgatatcccgt 10588297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15210745 - 15210664
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta-tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||| ||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  15210745 ttatgttgaaggataaattatgatttatctactttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 15210664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 38226713 - 38226654
Alignment:
Q  37 gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  38226713 gatttttaagaagtgtaatatcccgttatatgttgtttactctgataaatgtttatgaaa 38226654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 34200092 - 34200035
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  34200092 tgttgaaggataaattattatttatctatttgaga-ttttaagaagtgtgatatcccgt 34200035  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27848586 - 27848668
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| || ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  27848586 ttatgctgcaggataaattattatttatctatttttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 27848668  T

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Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11996820 - 11996879
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcc 59  Q
    ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||    
T  11996820 ttatgttgaagtataaattattatttatctattttgagatttttaagaagtgtgatatcc 11996879  T

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Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 15144858 - 15144914
Alignment:
Q  7 tgaaggatgaattattatttatctatttgaga-tttttaagaagtgtgatatcccgt 62  Q
    |||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  15144858 tgaaggataaattgttatttatctatttaagattttttaagaagtgtgatatcccgt 15144914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 15164438 - 15164494
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagat-ttttaagaagtgtgatatcccgt 62  Q
    |||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||    
T  15164438 tgaaggataaattgttatttatctatttaagatattttaagaagtgtgatatcccgt 15164494  T

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Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 15755763 - 15755818
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| ||||||||||| | ||| |||||||||    
T  15755763 tgaaggataaattattatttatctatttaagatttttaagtaatgttatatcccgt 15755818  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 9508500 - 9508459
Alignment:
Q  17 attattatttatctatttgagatttttaagaagtgtgatatc 58  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  9508500 attattatttatctatttaagatttttgagaagtgtgatatc 9508459  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 12317505 - 12317419
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgttta 91  Q
    |||||||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  |||||||||||||||||||| ||||    
T  12317505 tgaaggataaattattatttatctatgttttgaaggttttaagaa-tgtgatatcccgttaattgttgtttactctgataaatattta 12317419  T

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Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 17736844 - 17736806
Alignment:
Q  25 ttatctatttgagatttttaagaagtgtgatatcccgta 63  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  17736844 ttatctgtttaagatttttaagaagtgtgatatcccgta 17736806  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 3565161 - 3565190
Alignment:
Q  67 tgttgtttactctgataaatgtttatgaaa 96  Q
    ||||||||||||||||||||||||||||||    
T  3565161 tgttgtttactctgataaatgtttatgaaa 3565190  T

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Target: scaffold0021 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 121128 - 121033
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  121128 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 121033  T

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Target: scaffold0021; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 174088 - 174006
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctat--ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||| |||||||||||||||||  |||||||||| ||||||||||||||||||| | ||||||| |||||||||    
T  174088 ttatgttgcaggataaattattatttatctatctttgagatttt-aagaagtgtgatatcccgttatatgttgtatactctgat 174006  T

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Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13024631 - 13024536
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  13024631 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgtgatatgttgtttactctgataaatgtttatgaaa 13024536  T

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Target: chr5; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13094815 - 13094720
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  13094815 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtctgatatcccgttatatgttgtttactctgataaatgtttatgaaa 13094720  T

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Target: chr5; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21998350 - 21998445
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  21998350 ttatgttgaaggataaattattatttatctatttaagatttttatgaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 21998445  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19661645 - 19661726
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  19661645 ttatgttgaaagataaattattatttatctattttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 19661726  T

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Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24492869 - 24492808
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  24492869 ttatgttgaatgataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 24492808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21293776 - 21293857
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||| || | |||||||||||||||||    
T  21293776 ttatgttgaaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcctgttatatgttgtttactctgat 21293857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 37723186 - 37723145
Alignment:
Q  41 tttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  37723186 tttaagaagtgtgatatcccgttatatgttgtttactctgat 37723145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 17409821 - 17409744
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| | |||||||||||||||||    
T  17409821 tgaaggataaattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaaatgttgtttactctgat 17409744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 25418772 - 25418714
Alignment:
Q  37 gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||| ||||||||| |  |||||||||||| |||||||||| ||||||    
T  25418772 gatttttaagaagtgtaatatcccgttatctgttgtttactc-gataaatgttaatgaaa 25418714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 25430667 - 25430608
Alignment:
Q  37 gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||| |||||  || |  |||||||||||||| |||||||||||||||    
T  25430667 gatttttaagaagtgtaatatcgtgttatctgttgtttactctggtaaatgtttatgaaa 25430608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 1095713 - 1095683
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  1095713 atgttgtttactctgataaatgtttatgaaa 1095683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 9077187 - 9077157
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  9077187 atgttgtttactctgataaatgtttatgaaa 9077157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 16673503 - 16673421
Alignment:
Q  16 aattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  |||||||||||||||||| |||||| ||||    
T  16673503 aattattatttatctatcttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgataattgtttaagaaa 16673421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 18417342 - 18417313
Alignment:
Q  67 tgttgtttactctgataaatgtttatgaaa 96  Q
    ||||||||||||||||||||||||||||||    
T  18417342 tgttgtttactctgataaatgtttatgaaa 18417313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 20804880 - 20804823
Alignment:
Q  8 gaaggatgaattattatttatcta----tttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||| ||||||||||||||||    ||||||||||||||||| |||||||||||||    
T  20804880 gaaggataaattattatttatctatgtttttgagatttttaagaa-tgtgatatcccgt 20804823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 33408580 - 33408498
Alignment:
Q  16 aattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  |||||||||||||||||| |||||| ||||    
T  33408580 aattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgataattgtttaagaaa 33408498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 20766302 - 20766246
Alignment:
Q  7 tgaaggatgaattattatttatcta----tttgagatttttaagaagtgtgatatccc 60  Q
    |||||||| ||||||||||||||||    ||||||||||||||||| |||||||||||    
T  20766302 tgaaggataaattattatttatctatgtttttgagatttttaagaa-tgtgatatccc 20766246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 22109344 - 22109372
Alignment:
Q  68 gttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||    
T  22109344 gttgtttactctgataaatgtttatgaaa 22109372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 168788 - 168884
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  168788 ttatgttgaaggataaattattatttatctattttgagatttttaagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 168884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16240771 - 16240866
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  16240771 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgttatctgttgtttactctgataaatgtttatgaaa 16240866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16271004 - 16271099
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||    
T  16271004 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcacgttatctgttgtttactctgataaatgtttatgaaa 16271099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15614400 - 15614305
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |  | ||||||||||||||||||||||||||||    
T  15614400 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatctcgttatctattgtttactctgataaatgtttatgaaa 15614305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3095693 - 3095596
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagattttt-aagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||   ||||||| |||||||||||||||||||||||    
T  3095693 ttatgttgaaggataaattattatttatctattttgagattttttaagaagtgtgatatcccgttttatgttgtctactctgataaatgtttatgaaa 3095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12902081 - 12901999
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  12902081 ttatgttgaaggataaattattatttatctatttgagatttttaagaagtgtgatatcccgtttcatgatgttttactctgat 12901999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16596498 - 16596408
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtt 89  Q
    |||||||||||||| |||| ||||||||||||||  || ||| ||||||||||||||||||||| | |||||||||||| |||||||||||    
T  16596498 ttatgttgaaggataaatttttatttatctatttttgaaattcttaagaagtgtgatatcccgttatatgttgtttactttgataaatgtt 16596408  T

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Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7798077 - 7798016
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  7798077 ttatgttgaaggataaattattatttatctatttaaaatttttaagaagtgtgatatcccgt 7798016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14054087 - 14054169
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||| ||| | |||||||||||||||||    
T  14054087 ttatgttgaaggataaattattatttatctatttttgagatttt-aagaagtgtgatatctcgttatatgttgtttactctgat 14054169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17045810 - 17045728
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  17045810 ttatgttgcaggataaattattatttatctatttttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 17045728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 44052152 - 44052097
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  44052152 tgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 44052097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 52874020 - 52874115
Alignment:
Q  1 ttatgttgaaggatgaatta-ttatttatctatttga-gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||| ||| |||||| ||| | ||||||||||||||||||||||| || |  ||||| |||||||||||||||||| |||||    
T  52874020 ttatgttgaaggat-aattagttaattatctgttttatgatttttaagaagtgtgatatcctgttatctgttg-ttactctgataaatgtttctgaaa 52874115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 28657519 - 28657567
Alignment:
Q  432 aacttccttcctaaaatagtggaactaaatcatggattgggaagtggtg 480  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  28657519 aacttctttcctaaaaaagtggaactaaatcatggagtggaaagtggtg 28657567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 15366931 - 15366901
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  15366931 atgttgtttactctgataaatgtttatgaaa 15366901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 15369260 - 15369230
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  15369260 atgttgtttactctgataaatgtttatgaaa 15369230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 15372768 - 15372738
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  15372768 atgttgtttactctgataaatgtttatgaaa 15372738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 15375057 - 15375027
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  15375057 atgttgtttactctgataaatgtttatgaaa 15375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 6e-35; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23285739 - 23285644
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  23285739 ttatgttaaaggataaattattatttatctatttgagatttttaagaagtgtgatatcccgttatatgttgtttactctaataaatgtttatgaaa 23285644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8945960 - 8945871
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaa 95  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||  ||| | ||||||||||||||||||||||||||||||    
T  8945960 gttgaaggataaattattatttatctatttaagatttt-aagaagtgtgatatttcgttatatgttgtttactctgataaatgtttatgaa 8945871  T

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Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23655198 - 23655280
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||| || |||||||||||    
T  23655198 ttatgttgaaggataaattattatttatctatttgagatttttaggaagtgtgatatcccgtttcatgatgttttactctgat 23655280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22336434 - 22336373
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22336434 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 22336373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23040980 - 23041040
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23040980 ttatgttgaaggataaattattatttatctatttgaga-ttttaagaagtgtgatatcccgt 23041040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 38917 - 38995
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaat 86  Q
    |||||||| |||||| |||||| ||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||    
T  38917 tgaaggataaattatcatttatgtatttgagatttt-aagaagtgtgatatctcgttatatgttgtttactctgataaat 38995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27345206 - 27345290
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta--tttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||  |||| || |||||||||||    
T  27345206 ttatgttgaaggataaattattatttatctatttttgagacttttaagaagtgtgatatcccgtttcatgatgttttactctgat 27345290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 20321969 - 20321887
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttg--agatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||| |||||||||||||||||||   ||||||| ||||||||||||||||||| | |||||||||||||||||    
T  20321969 ttatgttgcaggataaattattatttatctatttttaagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 20321887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23104193 - 23104275
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| | ||||||| |||||||||    
T  23104193 ttatgttgcaggataaattattatttatctatttttgagatttt-aagaagtgtgatatcccgttatatgttgtatactctgat 23104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23072760 - 23072842
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta-tttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||  |||| || |||||||||||    
T  23072760 ttatgttgaaggataaattattatttatctattttgaga-ttttaagaagtgtgatatcccgtttcatgatgttttactctgat 23072842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 21319461 - 21319537
Alignment:
Q  7 tgaaggatgaattattatttatcta--tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||   |||||||||||||||||    
T  21319461 tgaaggataaattattatttatctacttttgagatttt-aagaagtgtgatatcccgttttatgttgtttactctgat 21319537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 21328392 - 21328468
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagat-ttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| |||||||||||||||| || |||  |||||||||||||||||||||||   |||||||||||||||||    
T  21328392 tgaaggataaattattatttatctactttagagattttaagaagtgtgatatcccgttttatgttgtttactctgat 21328468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23110767 - 23110849
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||| |||||||||||| ||||||  |||||||| ||||||||||||||||||| | ||||||| |||||||||    
T  23110767 ttatgttgcaggataaattattatttacctatttttgagatttt-aagaagtgtgatatcccgttatatgttgtatactctgat 23110849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23657133 - 23657071
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagat-ttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||| ||||||||||||||  ||| |||| ||||||||||||||||||    
T  23657133 ttatgttgaaggataaattgttatttatctatttatgatatttttagaagtgtgatatcccgt 23657071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 24672795 - 24672749
Alignment:
Q  50 tgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||   |||||||||||||||||||||||||||||||    
T  24672795 tgtgatatcccgttttatgttgtttactctgataaatgtttatgaaa 24672749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18787580 - 18787632
Alignment:
Q  1 ttatgttgaaggatgaattattatttatct-atttgagatttttaagaagtgt 52  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||||||||||    
T  18787580 ttatgttgaaggataaattgttatttatctcatttaagatttttaagaagtgt 18787632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 24679404 - 24679374
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  24679404 atgttgtttactctgataaatgtttatgaaa 24679374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 19692391 - 19692468
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  ||||||||||||||||    
T  19692391 tgaaggataaattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgat 19692468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1172 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold1172
Description:

Target: scaffold1172; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2144 - 2049
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  2144 ttatgttaaaggataaattattatttatctatttgagatttgtaagaagtgtgatatcccgttatatgttgtttactctgataaatgtctatgaaa 2049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31824 - 31729
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||    
T  31824 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcacgttatctgttgtttactctgataaatgtttatgaaa 31729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29923 - 30018
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  29923 ttatgttaaaggataaattattatttatctatttgatatttttaagaagtgtgatatcccgttatatattgtttactctgataaatgtttatgaaa 30018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21302349 - 21302444
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| | || ||||||||||||||||||||||||||||    
T  21302349 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgggatatcccgttatatattgtttactctgataaatgtttatgaaa 21302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 27240595 - 27240682
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  27240595 tgaaggataaattattatttatctatt-gagatttt-aagaaatgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 27240682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20134490 - 20134429
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  20134490 ttatgttgaaggataaattattatttatctatttaaaatttttaagaagtgtgatatcccgt 20134429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27251541 - 27251606
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgaga----tttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||| |||||||||||||||| ||    |||||||||||||| |||||||||    
T  27251541 ttatgttgaaggataaatcattatttatctatttgtgatttttttttaagaagtgtaatatcccgt 27251606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 38802220 - 38802259
Alignment:
Q  43 taagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  38802220 taagaagtgtgatatcccgttatatgttgtttactctgat 38802259  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 20915513 - 20915483
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  20915513 atgttgtttactctgataaatgtttatgaaa 20915483  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 30643769 - 30643692
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  ||||||||||||||||    
T  30643769 tgaaggataaattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgat 30643692  T

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Target: scaffold0235 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12243 - 12340
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  12243 ttatgttgaaggataaattattatttatctatttttgagattttttagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 12340  T

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Target: scaffold0174 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12406 - 12309
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||    
T  12406 ttatgttgaaggataaattattatttatctatttttgagatttttaagaagtgtgatatcccgttatatgttgtttactctgataaatgtctatgaaa 12309  T

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Target: scaffold0120 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 15464 - 15369
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||    
T  15464 ttatgttgaaggataaattattatttatctatttaacatttttaagaagtgtgatatccctttatctgttgtttactctgataaatgtttatgaaa 15369  T

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Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 18141 - 18198
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||| ||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  18141 gttgaaagataaattcttatttatctatttatgatttttaagaagtgtgatatcccgt 18198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33782 - 33838
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccg 61  Q
    |||||| ||| |||| ||||||||||||||  |||||||||||||||||||||||||    
T  33782 gttgaaagataaattgttatttatctatttatgatttttaagaagtgtgatatcccg 33838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 45223 - 45167
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccg 61  Q
    |||||| ||| |||| ||||||||||||||  |||||||||||||||||||||||||    
T  45223 gttgaaagataaattgttatttatctatttatgatttttaagaagtgtgatatcccg 45167  T

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Target: scaffold0012 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 225895 - 225798
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| |||| ||||||||||||||  || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  225895 ttatgttgaaggataaattgttatttatctatttttgaaatttttaagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 225798  T

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Target: scaffold0427 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 12817 - 12729
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  12817 tgaaggataaattattatttatctatttgagatttt-aagaagtgtgatatcctgttatatgttgtttactctgataaatgtttatgaaa 12729  T

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Target: chr8 (Bit Score: 66; Significance: 6e-29; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 31970618 - 31970530
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  31970618 tgaaggataaattgttatttatctatttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 31970530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7372086 - 7371996
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttat 92  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  7372086 ttatgttgaaggataaattattatttatctatttaagatttt-aagaagtgtgatatcccgttatatgttgtttactctgataaatatttat 7371996  T

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Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5867049 - 5867131
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  5867049 ttatgttgaaggataaattattatttatctattttcgagatttt-aagaagtgtgatatcccgttacatgttgtttactctgat 5867131  T

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Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21248705 - 21248615
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgataaatgtt 89  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||| || ||||||||||| ||||||    
T  21248705 ttatgttgaaggataaattattatttatctattttgagatttttaagaagtgtgatatcccgtttcatgatgttttactctgattaatgtt 21248615  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21254531 - 21254441
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgataaatgtt 89  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||| || ||||||||||| ||||||    
T  21254531 ttatgttgaaggataaattattatttatctattttgagatttttaagaagtgtgatatcccgtttcatgatgttttactctgattaatgtt 21254441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45131801 - 45131882
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  45131801 ttatgttgaaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 45131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23647930 - 23647869
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  23647930 ttatgttgaaggataaattattatttatctatttaagatttttaaaaagtgtgatatcccgt 23647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 18880027 - 18880082
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18880027 tgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 18880082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21919755 - 21919817
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgag-atttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||    
T  21919755 ttatgttgaaggataaattattatttatctatttatgaatttttaagaagtgtgatatcccgt 21919817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18819231 - 18819288
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatc 58  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||    
T  18819231 ttatgttgaaggataaattattatttttctatttaagatttttaaaaagtgtgatatc 18819288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22626034 - 22625973
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||| |||||||||| |||  ||||||||||||||||||||||||||    
T  22626034 ttatgttgaaggataaattgttatttatctgtttaggatttttaagaagtgtgatatcccgt 22625973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 17140232 - 17140177
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||||  ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  17140232 tgaaggatagattataatttatctatttaagatttttaagaagtgagatatcccgt 17140177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 23405732 - 23405676
Alignment:
Q  39 tttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||| ||| |  ||||||| ||||||||||||||||||||||    
T  23405732 tttttaagaagtgtgatatctcgttatctgttgtt-actctgataaatgtttatgaaa 23405676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 21396777 - 21396837
Alignment:
Q  6 ttgaaggatgaattattatttatctat----ttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||| ||| |||||||||||||||||    || |||||||||||||||||||||||||||    
T  21396777 ttgaaagataaattattatttatctatgtttttaagatttttaagaagtgtgatatcccgt 21396837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 21791270 - 21791330
Alignment:
Q  6 ttgaaggatgaattattatttatctat----ttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||| ||| |||||||||||||||||    || |||||||||||||||||||||||||||    
T  21791270 ttgaaagataaattattatttatctatgtttttaagatttttaagaagtgtgatatcccgt 21791330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 15603768 - 15603847
Alignment:
Q  7 tgaaggatgaattattatttatcta---tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataa 84  Q
    |||||||| ||||||||||||||||   ||| || |||||||||| ||||||||||||| |  ||||| ||||||||||||    
T  15603768 tgaaggataaattattatttatctatgttttaaggtttttaagaa-tgtgatatcccgttatttgttgattactctgataa 15603847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Original strand, 19802655 - 19802685
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  19802655 atgttgtttactctgataaatgtttatgaaa 19802685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 19904763 - 19904733
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  19904763 atgttgtttactctgataaatgtttatgaaa 19904733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26335 - 26240
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||| |  ||||||||||||||||||||||||| ||||    
T  26335 ttatgttgaaggataaattattatttatctatttaagaattgtaagaagtgtgatatcccgttatctgttgtttactctgataaatgtttaagaaa 26240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31466 - 31371
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||    
T  31466 ttatgttgaaggataaattattatttatctattgaatatttttaagaagtgtgatatcccgttatctgttgtttactttgataaatgtttatgaaa 31371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 4025 - 3933
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagat-ttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||| |||||||||||||||||||  ||  ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  4025 gttgaaggataaattattatttatctatttttgacattttaagaagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 3933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 10322 - 10232
Alignment:
Q  7 tgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||||||||||||||||||  |||||||| ||||||||||||||||| |   ||||||||||||||||||||||||| |||||    
T  10322 tgaaggataaattattatttatctatttttgagatttt-aagaagtgtgatatcccattttatgttgtttactctgataaatgtttttgaaa 10232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 29638 - 29733
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  29638 ttatgttgaaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcccgttatatgttgtttactatgataaatgtttatgaaa 29733  T

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Target: scaffold0146; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31980 - 32075
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  31980 ttatgttgaaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcccgttatatgttgtttactatgataaatgtttatgaaa 32075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 22219 - 22307
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  22219 tgaaggataaattattatttatcaatttaagatttt-aagaagtgtgatatcccgttatatgttgtttactctgataaatgtttaggaaa 22307  T

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Target: scaffold0161 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 3200 - 3287
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||||||||||||||||| |||||||| ||||||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  3200 tgaaggataaattattatttatctatt-gagatttt-aagaagtttgatatcccgttatatgttgtttactctgataaatgtttatgaaa 3287  T

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Target: scaffold0113 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31390 - 31295
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||| || | |||||||||||||| ||||||||||||||||    
T  31390 ttatgttgaaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcctgttatatgttgtttactctaataaatgtttatgaaa 31295  T

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Target: scaffold0639 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7790 - 7729
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7790 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 7729  T

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Target: scaffold1655 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1655
Description:

Target: scaffold1655; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 697 - 610
Alignment:
Q  4 tgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgataaatgtt 89  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||| || ||||||||||| ||||||    
T  697 tgttgaaggataaattattatttatctattttgagatttttaagaagtgtgatatcccgtttcatgatgttttactctgattaatgtt 610  T

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Target: scaffold0100 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16966 - 16908
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcc 59  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16966 ttatgttgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcc 16908  T

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Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35244898 - 35244817
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||    
T  35244898 ttatgttgaaggataaattatgatttatctattttgag-tttttaagaagtgtgatatcccgttatatgttgtttactctgat 35244817  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 19398921 - 19398833
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| || |||||||||||||||||||||||| ||||| |||||||||  || | |||||||||||| ||||||||||||||||||    
T  19398921 tgaaggataaactattatttatctatttgagatttt-aagaaatgtgatatcatgttatatgttgtttactttgataaatgtttatgaaa 19398833  T

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Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16921429 - 16921511
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  16921429 ttatgttgcaggataaattattatttatctatttttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 16921511  T

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Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29059849 - 29059788
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  29059849 ttatgttgaaggataaattgttatttatctatttatgatttttaagaagtgtgatatcccgt 29059788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 21760816 - 21760760
Alignment:
Q  6 ttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  21760816 ttgaaagataaattgttatttatctatttgagatttttaagaagtgtgatatcccgt 21760760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22830832 - 22830751
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta--tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctga 81  Q
    ||||| || ||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  22830832 ttatgctgcaggataaattattatttatctaattttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctga 22830751  T

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Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19304320 - 19304381
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||| ||||||||||||||  |||||| |||||||||||||||||||    
T  19304320 ttatgttgaaggataaattgttatttatctatttatgattttaaagaagtgtgatatcccgt 19304381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 25607298 - 25607351
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatccc 60  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  25607298 tgaaggataaattgttatttatctatttgagatttttaagatgtgtgatatccc 25607351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 25630168 - 25630249
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgataa 84  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||| |||||||| |||  |||| || |||||||||||||    
T  25630168 tgttgaaggataaattgttatttatctatttaagatttttaagaagagtgatatctcgtttcatgatgttttactctgataa 25630249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 11183610 - 11183554
Alignment:
Q  6 ttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  11183610 ttgaaagataaattgttatttatctatttgagatttttaagaagtgcgatatcccgt 11183554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 25604207 - 25604259
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcc 59  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  25604207 tgaaggataaattgttatttatctatttgagatttttaagatgtgtgatatcc 25604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 25612545 - 25612597
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcc 59  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  25612545 tgaaggataaattgttatttatctatttgagatttttaagatgtgtgatatcc 25612597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 1560612 - 1560557
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| ||||||||||| | ||| |||||||||    
T  1560612 tgaaggataaattattatttatctatttaagatttttaagtaatgttatatcccgt 1560557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 4739330 - 4739391
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttgagat---ttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| |||||||||||||||||||  |||   |||||||||||||||||| ||||    
T  4739330 tgttgaaggataaattattatttatctatttacgatttcttttaagaagtgtgatattccgt 4739391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 18179821 - 18179743
Alignment:
Q  7 tgaaggatgaattattatttatcta---tttg-agatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||||||||||||||   |||| ||||||||||||| ||||||||||||| |  || |||||||||||||    
T  18179821 tgaaggataaattattatttatctatgttttgaagatttttaagaa-tgtgatatcccgttaattgctgtttactctgat 18179743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22603909 - 22603991
Alignment:
Q  16 aattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  |||||||||||||||||| |||||| ||||    
T  22603909 aattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgataattgtttaagaaa 22603991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13018765 - 13018713
Alignment:
Q  1 ttatgttgaaggatgaattattatttatct-atttgagatttttaagaagtgt 52  Q
    |||||||||||||| |||| |||||||||| ||||  ||||||||||||||||    
T  13018765 ttatgttgaaggataaattgttatttatctcatttatgatttttaagaagtgt 13018713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 34518815 - 34518863
Alignment:
Q  432 aacttccttcctaaaatagtggaactaaatcatggattgggaagtggtg 480  Q
    ||||||||| ||||||  |||||||||||||||||| ||| ||||||||    
T  34518815 aacttccttgctaaaaatgtggaactaaatcatggagtggaaagtggtg 34518863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26682655 - 26682594
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26682655 ttatgctgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 26682594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 15458625 - 15458684
Alignment:
Q  37 gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  15458625 gatttttaagaagtgtgatatcccgttatctgttgtttactctgataaatgtttatgaaa 15458684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10901971 - 10902032
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10901971 ttatcttgaaggataaattattatttatctatttgagattttcaagaagtgtaatatcccgt 10902032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18437835 - 18437774
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||    
T  18437835 ttatgttgaaggataacttattatttatctatttaagatttttaagaaatgtgatatcccgt 18437774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43840240 - 43840183
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatc 58  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  43840240 ttatgttgaaggatacattattatttatctatttaagatttttaagaagtgtgatatc 43840183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 17498659 - 17498563
Alignment:
Q  1 ttatgttgaaggatgaatta-ttatttatctatttga-gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||| ||||| ||| |||||| ||| | |||||||| ||||||||||||||||| | |||| ||||||||||||| ||||||||||||    
T  17498659 ttatgttgaaggat-aattagttaattatctgttttatgatttttatgaagtgtgatatcccgttatatgtggtttactctgatagatgtttatgaaa 17498563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 43840156 - 43840107
Alignment:
Q  47 aagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  43840156 aagtgtgatatcccgttatatgttgtttactctgataaatgtttatgaaa 43840107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 30025387 - 30025328
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttga-gatttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||    
T  30025387 tgttgaaggataaattgttatttatctattttacgatttttaagaagtgtgatatcccgt 30025328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 30027870 - 30027811
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttga-gatttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||||    
T  30027870 tgttgaaggataaatttttatttatctattttacgatttttaagaagtgtgatatcccgt 30027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 2898566 - 2898652
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgttta 91  Q
    |||||||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  |||||||||||||||||||||||||    
T  2898566 tgaaggataaattattatttatctatgttttgaaggttttaagaa-tgtgatatcccgttaattgttgtttactctgataaatgttta 2898652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14577617 - 14577678
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||  ||||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  14577617 ttatgttacaggataaattgttatttatctatttctgatttttaagaagtgtgatatcccgt 14577678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 17487127 - 17487075
Alignment:
Q  40 ttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttat 92  Q
    ||||| ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  17487127 ttttatgaagtgtgatatcccgttatatgtggtttactctgataaatgtttat 17487075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 30024119 - 30024060
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttga-gatttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| |||| |||||||| ||||| | ||||||||||||||||||||||||||    
T  30024119 tgttgaaggataaattgttatttatatattttacgatttttaagaagtgtgatatcccgt 30024060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 30029139 - 30029080
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttga-gatttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| |||| |||||||||||||| | |||||||| |||||||||||||||||    
T  30029139 tgttgaaggataaattgttatttatctattttacgatttttatgaagtgtgatatcccgt 30029080  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23083932 - 23083996
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgag---atttttaagaagtgtgatatcccgt 62  Q
    |||||||||| ||| ||||||||||||||||||| ||    ||||||||||||||||||||||||    
T  23083932 ttatgttgaatgataaattattatttatctatttaagtttttttttaagaagtgtgatatcccgt 23083996  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 26197217 - 26197308
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||||||||||||||||   || || |||||||||| ||||||||||||| |  || || ||||||||||||||||||| ||||    
T  26197217 tgaaggataaattattatttatctatgttttaaggtttttaagaa-tgtgatatcccgttatttgatgattactctgataaatgtttaagaaa 26197308  T

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Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 14571930 - 14571877
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatc 58  Q
    |||||||||| |||| ||||||||||||||  |||||||||||| |||||||||    
T  14571930 gttgaaggataaattgttatttatctatttatgatttttaagaaatgtgatatc 14571877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 21606915 - 21606863
Alignment:
Q  44 aagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    ||||||||||| || |||| | |||||||||| ||||||||||||||||||||    
T  21606915 aagaagtgtgacattccgttatatgttgtttattctgataaatgtttatgaaa 21606863  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 23078177 - 23078255
Alignment:
Q  7 tgaaggatgaattattatttatc--tatttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgata 83  Q
    |||||| | ||||||||||||||  ||||||||||||| |||||||||||||||||||  |||| || ||||||||||||    
T  23078177 tgaagggtaaattattatttatccatatttgagatttt-aagaagtgtgatatcccgtttcatgatgttttactctgata 23078255  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 3833033 - 3832942
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||| ||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  |||||||||||||||||| |||||| ||||    
T  3833033 tgaaagataaattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgataattgtttaagaaa 3832942  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 51694846 - 51694755
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||| |||| ||||||||||||   ||||   ||||||||| ||||||||||||| |   |||||||||||||||||||||||| ||||    
T  51694846 tgaaggataaattgttatttatctatgttttgaagattttaagaa-tgtgatatcccgttaatagttgtttactctgataaatgtttaagaaa 51694755  T

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Target: scaffold0647 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 6878 - 6933
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  6878 tgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 6933  T

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Target: scaffold0305 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 19998 - 19943
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  19998 tgaaggataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 19943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 3566 - 3507
Alignment:
Q  37 gatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  3566 gatttttaagaagtgtgatatcccgttatctgttgtttactctgataaatgtttatgaaa 3507  T

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Target: scaffold0309 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 13197 - 13124
Alignment:
Q  9 aaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13197 aaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcccgttacatgttgtttactctgat 13124  T

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Target: scaffold0017 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 193792 - 193873
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||| ||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  193792 ttatattgaaggataaattatgatttatctattttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 193873  T

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Target: scaffold1098 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2432 - 2371
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  2432 ttatgtttaaggataaattattatttatctttttaagatttttaagaagtgtgatatcccgt 2371  T

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Target: scaffold0141 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36650 - 36589
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  36650 ttatgttgaaggataaattgttatttatctatttatgatttttaagaagtgtgatatcccgt 36589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 65841 - 65784
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  65841 gttgaagaataaattattatttatctatttaagatttttaagaagtgtgatatcccgt 65784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 78162 - 78223
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  78162 ttatgttgaaggataaattgttatttatctatttatgatttttaagaagtgtgatatcccgt 78223  T

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Target: scaffold0026 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25248 - 25187
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25248 ttatgtttaaggataaattattatttatctttttaagatttttaagaagtgtgatatcccgt 25187  T

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Target: scaffold0622 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4711 - 4629
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| || ||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  4711 ttatgctgcaggataaattattatttatctatttttgagatttt-aagaagtgtgatatcccgttaaatgttgtttactctgat 4629  T

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Target: scaffold0598 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1805 - 1887
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| | ||| |||||||||||||||||||  |||||||| ||||||||||||||||||| | |||||||||||||||||    
T  1805 ttatgttgcaagataaattattatttatctatttttgagatttt-aagaagtgtgatatcccgttatatgttgtttactctgat 1887  T

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Target: scaffold0042 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 24897 - 24952
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  24897 tgaaggataaattattatttatctatttaagatttttatgaagtgtgatatcccgt 24952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3536 - 3478
Alignment:
Q  4 tgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    ||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  3536 tgttgaaggataaattgttatttatctatttatgatttttaagaagtgtgatatcccgt 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 1263 - 1190
Alignment:
Q  9 aaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  1263 aaggataaattatgatttatctatttcgagatttt-aagaagtgtgatatcccgttacatgtcgtttactctgat 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 5636 - 5719
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||| |||||||||||||||||||        |||||||||||||||||||| |  ||||||| ||||||||||||||||||||||    
T  5636 gttgaaggataaattattatttatctattt--------taagaagtgtgatatcccgttatctgttgttcactctgataaatgtttatgaaa 5719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 15474 - 15531
Alignment:
Q  5 gttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||| ||| |||| ||||||||||||||  ||||||||||||||||||||||||||    
T  15474 gttgaaagataaattgttatttatctatttatgatttttaagaagtgtgatatcccgt 15531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 33435 - 33381
Alignment:
Q  7 tgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatccc 60  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  33435 tgaaggataaattattatttatctattttgagatttttaagaagtgtgatatccc 33381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47294 - 47233
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||| ||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  47294 ttatattgaaggataaattattattcatctatttaagatttttcagaagtgtgatatcccgt 47233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 50892 - 50839
Alignment:
Q  6 ttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcc 59  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  50892 ttgaaagataaattgttatttatctatttgagatttttaagaagtgtgatatcc 50839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 128058 - 127997
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||| ||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  128058 ttatattggaggataaattattatttatctatttaagatttctaagaagtgtgatatcccgt 127997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 562 - 613
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatc 58  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  562 tgaaggataaattattatttatctatttaagattttttagaagtgtgatatc 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16274 - 16357
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||| ||| ||||||||| ||||||||| || |||||||||||||||||||||||||  |||| || |||||||||||    
T  16274 ttatgttgaacgataaattattatatatctattttgatatttttaagaagtgtgatatcccgtttcatgatgttttactctgat 16357  T

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Target: scaffold0114; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26423 - 26506
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta-tttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||||| ||||||||||||||||  |||| || |||||||||||    
T  26423 ttatgttgaaggataaatcattatttatctattttgatatttttaaaaagtgtgatatcccgtttcatgatgttttactctgat 26506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3945 - 4026
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| |||||||| |||||| |||||||||||| |||||||| ||||| |||||||||||||   |||||||||||||||||    
T  3945 ttatgatgaaggataaattatgatttatctattttgagatttt-aagaaatgtgatatcccgttttatgttgtttactctgat 4026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 17915 - 17993
Alignment:
Q  7 tgaaggatgaattattatttatctat----ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||||||||||||||     || ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  17915 tgaaggataaattattatttatctacgttattaagatttttaagaa-tgtgatatcccgttacatgttgtttactctgat 17993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 46317 - 46236
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta-tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||  || | |||||||||||| ||||    
T  46317 ttatgttgaaggataaattatgatttatctattttgaga-ttttaagaagtgtgatatctagttatatgttgtttactttgat 46236  T

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Target: scaffold0825 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 443 - 494
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatc 58  Q
    |||||||| |||||||||| ||||| || |||||||||||||||||||||||    
T  443 tgaaggataaattattattgatctaattaagatttttaagaagtgtgatatc 494  T

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Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 12535 - 12481
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||| | ||||||||||||||||||| || ||||||||||||||||||||||||    
T  12535 tgaagggtaaattattatttatctatttaag-tttttaagaagtgtgatatcccgt 12481  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 340773 - 340828
Alignment:
Q  7 tgaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgt 62  Q
    |||||||| |||| ||||||||||||||   |||||||||||||||||||||||||    
T  340773 tgaaggataaattgttatttatctattttttatttttaagaagtgtgatatcccgt 340828  T

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Target: scaffold0094 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 612 - 693
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt-gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| |||||||| |||||| |||||||||||| |||||||| ||||| |||||||||| ||   |||||||||||||||||    
T  612 ttatgatgaaggataaattatgatttatctattttgagatttt-aagaaatgtgatatcctgttttatgttgtttactctgat 693  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 119614 - 119565
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta-tttgagatttttaagaag 49  Q
    |||||||||||||| |||||||||||||||| |||||||||||| |||||    
T  119614 ttatgttgaaggataaattattatttatctattttgagatttttgagaag 119565  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 14555 - 14637
Alignment:
Q  16 aattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||   |||| | ||||||||| ||||||||||||| |  |||||||||||||||||| |||||| ||||    
T  14555 aattattatttatctatgttttgaaaattttaagaa-tgtgatatcccgttaattgttgtttactctgataattgtttaagaaa 14637  T

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Target: scaffold0718 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5926 - 6008
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| || ||||| |||||| ||||||||||||  |||||||| |||||||||||||| | || | |||||||||||||||||    
T  5926 ttatgctgcaggataaattatgatttatctatttttgagatttt-aagaagtgtgatattctgttatatgttgtttactctgat 6008  T

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Target: scaffold0106 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 607 - 525
Alignment:
Q  1 ttatgttgaaggatgaattattatttatctattt--gagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| || ||||| ||| |||||||||||||||  |||||||| ||||||||||||||||||| | ||| | |||||||||||    
T  607 ttatgctgcaggataaatcattatttatctatttttgagatttt-aagaagtgtgatatcccgttatatgatctttactctgat 525  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 118463 - 118515
Alignment:
Q  1 ttatgttgaaggatgaattattatttatct-atttgagatttttaagaagtgt 52  Q
    |||||||||||||| |||| |||||||||| ||||| ||||||||||||||||    
T  118463 ttatgttgaaggataaattgttatttatctcatttgtgatttttaagaagtgt 118515  T

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Target: scaffold0411 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 9762 - 9711
Alignment:
Q  32 tttgagatttttaagaagtgtgatatcccgtaacatgttg-tttactctgat 82  Q
    |||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  9762 tttgagatttttaagaagtgtgatatcccgtttcatgatgttttactctgat 9711  T

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Target: scaffold1551 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1551
Description:

Target: scaffold1551; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 1384 - 1354
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  1384 atgttgtttactctgataaatgtttatgaaa 1354  T

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Target: scaffold1459 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 21 - 99
Alignment:
Q  7 tgaaggatgaattattatttatcta----tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||||||||||||||    | ||||||||||||||| ||||||||| ||| |  ||||||||||||||||    
T  21 tgaaggataaattattatttatctatgtttctgagatttttaagaa-tgtgatatcacgttaattgttgtttactctgat 99  T

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Target: scaffold1061 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 150 - 224
Alignment:
Q  8 gaaggatgaattattatttatctatttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||||| | || |||| |||||||||  ||||||| |||| ||| ||||||||| | |||||||||||||||||    
T  150 gaaggataatttgttatctatctatttatgatttttgagaaatgtcatatcccgttatatgttgtttactctgat 224  T

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Target: scaffold0456 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11224 - 11305
Alignment:
Q  1 ttatgttgaaggatgaattattatttatcta-tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    ||||| |||||||| |||||| ||||||||| ||||||| ||||||||| ||||||||||  |   |||||||||||||||||    
T  11224 ttatgatgaaggataaattatgatttatctattttgaga-ttttaagaaatgtgatatccaattttatgttgtttactctgat 11305  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 9538 - 9508
Alignment:
Q  66 atgttgtttactctgataaatgtttatgaaa 96  Q
    |||||||||||||||||||||||||||||||    
T  9538 atgttgtttactctgataaatgtttatgaaa 9508  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 17267 - 17345
Alignment:
Q  7 tgaaggatgaattattatttatcta----tttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| ||||||||||||||||    | ||||||||||||||| ||||||||||||| |  |||||||| |||||||    
T  17267 tgaaggataaattattatttatctatgtttatgagatttttaagaa-tgtgatatcccgttaattgttgtttcctctgat 17345  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 198119 - 198041
Alignment:
Q  7 tgaaggatgaattattatttatcta---tttgagatttttaagaagtgtgatatcccgtaacatgttgt-ttactctgat 82  Q
    |||||||| ||||||||||||||||   ||| ||||||||||||| |||||||||||||  |||| ||| ||||||||||    
T  198119 tgaaggataaattattatttatctatgttttaagatttttaagaa-tgtgatatcccgtttcatgatgtgttactctgat 198041  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 104479 - 104531
Alignment:
Q  1 ttatgttgaaggatgaattattatttatct-atttgagatttttaagaagtgt 52  Q
    |||||||||||||| |||| |||||||||| ||||  ||||||||||||||||    
T  104479 ttatgttgaaggataaattgttatttatctcatttatgatttttaagaagtgt 104531  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 67172 - 67249
Alignment:
Q  7 tgaaggatgaattattatttatctat---ttgagatttttaagaagtgtgatatcccgtaacatgttgtttactctgat 82  Q
    |||||||| |||||||||||||||||   ||||   ||||||||| ||||||||||||| |  ||||||||||||||||    
T  67172 tgaaggataaattattatttatctatgttttgaagattttaagaa-tgtgatatcccgttaattgttgtttactctgat 67249  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 73177 - 73125
Alignment:
Q  1 ttatgttgaaggatgaattattatttatct-atttgagatttttaagaagtgt 52  Q
    |||||||||||||| |||| |||||||||| ||||  ||||||||||||||||    
T  73177 ttatgttgaaggataaattgttatttatctcatttatgatttttaagaagtgt 73125  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 266708 - 266656
Alignment:
Q  1 ttatgttgaaggatgaattattatttatct-atttgagatttttaagaagtgt 52  Q
    |||||||||||||| |||| |||||||||| ||||  ||||||||||||||||    
T  266708 ttatgttgaaggataaattgttatttatctcatttatgatttttaagaagtgt 266656  T

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