View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12049_high_7 (Length: 540)

Name: NF12049_high_7
Description: NF12049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12049_high_7
NF12049_high_7
[»] chr4 (31 HSPs)
chr4 (19-301)||(8919181-8919467)
chr4 (301-527)||(8984983-8985209)
chr4 (301-527)||(13700801-13701027)
chr4 (301-527)||(21304531-21304757)
chr4 (301-527)||(54991767-54991993)
chr4 (301-527)||(8979863-8980089)
chr4 (301-527)||(21299411-21299637)
chr4 (301-527)||(39999413-39999638)
chr4 (301-527)||(40004371-40004596)
chr4 (301-527)||(54343547-54343772)
chr4 (301-527)||(54348701-54348926)
chr4 (301-526)||(54990388-54990613)
chr4 (332-527)||(36359672-36359867)
chr4 (301-527)||(36354486-36354710)
chr4 (19-298)||(8908906-8909185)
chr4 (332-452)||(53798329-53798449)
chr4 (301-452)||(41393858-41394009)
chr4 (352-452)||(51018753-51018853)
chr4 (301-452)||(9763269-9763420)
chr4 (301-452)||(13695757-13695908)
chr4 (301-452)||(13711370-13711521)
chr4 (372-452)||(4207042-4207122)
chr4 (385-452)||(47045700-47045767)
chr4 (463-527)||(13695439-13695503)
chr4 (463-527)||(9763771-9763835)
chr4 (463-527)||(41393520-41393584)
chr4 (463-527)||(53797906-53797970)
chr4 (453-527)||(51019117-51019191)
chr4 (463-527)||(13710946-13711010)
chr4 (463-527)||(47046060-47046124)
chr4 (152-208)||(8920055-8920111)
[»] chr7 (27 HSPs)
chr7 (301-527)||(33238346-33238572)
chr7 (301-527)||(33243523-33243749)
chr7 (332-527)||(47994144-47994339)
chr7 (332-527)||(47999319-47999514)
chr7 (301-452)||(21080317-21080468)
chr7 (332-452)||(2233979-2234099)
chr7 (301-452)||(19308872-19309023)
chr7 (301-452)||(42572600-42572751)
chr7 (332-452)||(17496100-17496220)
chr7 (332-452)||(17556994-17557114)
chr7 (301-452)||(12935084-12935235)
chr7 (300-452)||(32211960-32212112)
chr7 (301-452)||(47176492-47176643)
chr7 (301-452)||(43893542-43893693)
chr7 (332-445)||(16538700-16538813)
chr7 (332-445)||(16626849-16626962)
chr7 (301-384)||(47544745-47544828)
chr7 (463-527)||(2234384-2234448)
chr7 (463-527)||(12934674-12934738)
chr7 (463-527)||(19309365-19309429)
chr7 (463-527)||(21080793-21080857)
chr7 (463-527)||(42572222-42572286)
chr7 (463-527)||(43893146-43893210)
chr7 (463-527)||(16539166-16539230)
chr7 (463-527)||(16626432-16626496)
chr7 (475-527)||(32212419-32212471)
chr7 (463-527)||(47176904-47176968)
[»] chr6 (19 HSPs)
chr6 (301-527)||(22697768-22697994)
chr6 (301-527)||(22702944-22703170)
chr6 (301-524)||(21402035-21402258)
chr6 (300-475)||(29490807-29490982)
chr6 (301-452)||(2817397-2817548)
chr6 (301-452)||(34142781-34142932)
chr6 (301-452)||(34155397-34155548)
chr6 (301-452)||(6727773-6727924)
chr6 (301-452)||(34376464-34376615)
chr6 (301-452)||(24190650-24190802)
chr6 (301-452)||(31983475-31983626)
chr6 (463-527)||(31981840-31981904)
chr6 (463-527)||(34376206-34376270)
chr6 (463-527)||(24191126-24191190)
chr6 (463-527)||(24192223-24192287)
chr6 (463-525)||(6728193-6728255)
chr6 (475-527)||(34142366-34142418)
chr6 (475-527)||(34154982-34155034)
chr6 (492-527)||(29491005-29491040)
[»] chr5 (18 HSPs)
chr5 (301-527)||(17510349-17510575)
chr5 (301-527)||(42019864-42020090)
chr5 (301-527)||(42024644-42024870)
chr5 (332-527)||(17505244-17505439)
chr5 (332-527)||(43579951-43580146)
chr5 (332-527)||(41858877-41859070)
chr5 (332-441)||(41853846-41853955)
chr5 (332-452)||(1413100-1413220)
chr5 (332-452)||(36254517-36254637)
chr5 (300-452)||(24770600-24770752)
chr5 (301-428)||(26709712-26709839)
chr5 (301-428)||(26979446-26979573)
chr5 (370-452)||(24776124-24776206)
chr5 (463-527)||(1413806-1413870)
chr5 (463-527)||(24776563-24776627)
chr5 (463-526)||(36254114-36254177)
chr5 (463-524)||(26709383-26709444)
chr5 (463-524)||(26979117-26979178)
[»] chr1 (16 HSPs)
chr1 (301-527)||(27711614-27711840)
chr1 (332-527)||(34317841-34318036)
chr1 (332-527)||(36684271-36684466)
chr1 (332-527)||(37404027-37404222)
chr1 (332-527)||(37409146-37409341)
chr1 (332-527)||(11250732-11250927)
chr1 (332-527)||(27716734-27716929)
chr1 (301-452)||(5725365-5725516)
chr1 (295-452)||(5730771-5730928)
chr1 (301-452)||(3585301-3585452)
chr1 (332-452)||(48245999-48246119)
chr1 (332-390)||(50959011-50959069)
chr1 (463-527)||(5730382-5730446)
chr1 (453-527)||(48246427-48246501)
chr1 (463-527)||(3584878-3584942)
chr1 (414-447)||(50959091-50959124)
[»] scaffold0517 (1 HSPs)
scaffold0517 (332-527)||(3854-4049)
[»] chr2 (12 HSPs)
chr2 (301-527)||(40392610-40392836)
chr2 (332-527)||(42723007-42723202)
chr2 (332-527)||(42728176-42728371)
chr2 (301-525)||(44754132-44754355)
chr2 (300-527)||(44096646-44096872)
chr2 (301-525)||(44759298-44759521)
chr2 (334-526)||(40519925-40520122)
chr2 (332-526)||(40518076-40518275)
chr2 (299-452)||(4162889-4163042)
chr2 (332-452)||(28751048-28751168)
chr2 (463-527)||(4163331-4163395)
chr2 (463-524)||(28751483-28751544)
[»] scaffold0055 (1 HSPs)
scaffold0055 (332-527)||(3368-3563)
[»] scaffold0052 (1 HSPs)
scaffold0052 (332-527)||(80972-81167)
[»] chr8 (18 HSPs)
chr8 (332-527)||(32010870-32011065)
chr8 (332-527)||(32016044-32016239)
chr8 (301-526)||(2165390-2165616)
chr8 (301-452)||(43998542-43998693)
chr8 (301-452)||(17955130-17955281)
chr8 (332-452)||(24885324-24885444)
chr8 (301-452)||(42513844-42513995)
chr8 (390-452)||(21641211-21641273)
chr8 (453-527)||(24884990-24885064)
chr8 (463-527)||(21643835-21643899)
chr8 (463-524)||(21643020-21643081)
chr8 (463-524)||(21643395-21643456)
chr8 (471-527)||(42514182-42514238)
chr8 (463-524)||(21641520-21641581)
chr8 (463-524)||(21641895-21641956)
chr8 (463-524)||(21642270-21642331)
chr8 (463-524)||(21642645-21642706)
chr8 (463-527)||(43998984-43999048)
[»] chr3 (22 HSPs)
chr3 (301-527)||(15762556-15762781)
chr3 (301-527)||(15767717-15767942)
chr3 (301-527)||(20090187-20090413)
chr3 (301-527)||(20095312-20095538)
chr3 (332-527)||(55129081-55129275)
chr3 (299-527)||(17369010-17369238)
chr3 (301-452)||(3481645-3481796)
chr3 (332-452)||(34128438-34128558)
chr3 (332-452)||(17358566-17358685)
chr3 (332-452)||(30338127-30338247)
chr3 (301-452)||(30341200-30341351)
chr3 (336-452)||(54271312-54271428)
chr3 (300-452)||(4116945-4117097)
chr3 (370-452)||(3476257-3476339)
chr3 (463-527)||(17358115-17358179)
chr3 (463-527)||(54270922-54270986)
chr3 (463-524)||(4117345-4117406)
chr3 (463-527)||(3482166-3482230)
chr3 (463-527)||(30338506-30338570)
chr3 (463-527)||(34128923-34128987)
chr3 (463-527)||(3476699-3476763)
chr3 (463-525)||(10321722-10321784)
[»] scaffold0014 (2 HSPs)
scaffold0014 (332-527)||(31889-32084)
scaffold0014 (332-527)||(26717-26912)
[»] scaffold0594 (2 HSPs)
scaffold0594 (301-452)||(8530-8681)
scaffold0594 (463-526)||(8962-9025)
[»] scaffold0166 (4 HSPs)
scaffold0166 (300-452)||(12981-13133)
scaffold0166 (370-452)||(18508-18590)
scaffold0166 (463-527)||(13493-13557)
scaffold0166 (463-527)||(18946-19010)
[»] scaffold0060 (2 HSPs)
scaffold0060 (394-452)||(37654-37712)
scaffold0060 (453-527)||(37287-37361)


Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-101; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 8919467 - 8919181
Alignment:
Q  19 ggattacggtttgaactttggattttttatttatgt--acattaaaaaattgatcactttgagtgatggtagtgtcnnnnnnnnnnnn--aagaagaagc 114  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||              ||||||||||    
T  8919467 ggattagggtttgaactttggattttttatttatgtgtacattaaaaaattgatcactttgagtgatggtagtgtcttttttttttttttaagaagaagc 8919368  T
Q  115 ggtagtannnnnnnctgtttgtgtttgcatgcattctaattcggtgttgcctatttctttttcattttaatttttaaagaaaattaagaagttatagtgt 214  Q
    |||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  8919367 ggtagtatttttttctgttggtgtttgcatgcattctaattcggtgttgcctatttctttttccttttattttttaaagaaaattaagaagttatagtgt 8919268  T
Q  215 acaggcaaaactaaatcacatgtcatttttaacattataatgtctaaattaaaatgagtataggaaacataaatcttgataaagtgt 301  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8919267 acaggcacaactaaatcacatgtcatttttaacattataatgtctaaattaaaatgagtataggaaacataaatcttgataaagtgt 8919181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 8984983 - 8985209
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8984983 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 8985082  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8985083 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 8985182  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  8985183 aaactgagaatcgaatactcttctctg 8985209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 13701027 - 13700801
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  13701027 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 13700928  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13700927 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 13700828  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  13700827 aaactgagaatcgaatactcttctctg 13700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 21304531 - 21304757
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21304531 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 21304630  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21304631 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 21304730  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  21304731 aaactgagaatcgaatactcttctctg 21304757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 54991993 - 54991767
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  54991993 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 54991894  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||    
T  54991893 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgaaagctcgggaatagtattcttcacttca 54991794  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  54991793 aaactgagaatcgaatactcttctctg 54991767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 8979863 - 8980089
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8979863 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 8979962  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  8979963 tgtgaattgaaaattttatgtcccatatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgagaatagtattcttcactcca 8980062  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  8980063 aaactgagaatcgaatactcttctctg 8980089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 21299411 - 21299637
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  21299411 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaag 21299510  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  21299511 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactcca 21299610  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  21299611 aaactgagaatcgaatactcttctctg 21299637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 39999638 - 39999413
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  39999638 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 39999540  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39999539 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 39999440  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  39999439 aaactgagaatcgaatactcttctctg 39999413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 40004596 - 40004371
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  40004596 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 40004498  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40004497 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 40004398  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  40004397 aaactgagaatcgaatactcttctctg 40004371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 54343772 - 54343547
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  54343772 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 54343674  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54343673 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 54343574  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  54343573 aaactgagaatcgaatactcttctctg 54343547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 54348926 - 54348701
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  54348926 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 54348828  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54348827 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 54348728  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  54348727 aaactgagaatcgaatactcttctctg 54348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 301 - 526
Target Start/End: Original strand, 54990388 - 54990613
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    ||||||||||||| |||||||||        ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  54990388 tgttggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaag 54990487  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  54990488 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaattctccttataaattgagagctcgggtatagtattcttcactcca 54990587  T
Q  501 aaactgagaatcgaatactcttctct 526  Q
    |||||||||||| |||||||||||||    
T  54990588 aaactgagaatcaaatactcttctct 54990613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 36359867 - 36359672
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36359867 ttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 36359768  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||    
T  36359767 gtagatcacacactctagtagaaattctccttataaattgagagctcaggaatagtattctttactccaaaactgagaatcgaatactcttctctg 36359672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 36354710 - 36354486
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  36354710 tgttggaacactagtgtataatgaaaaac--ttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaag 36354613  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||||    
T  36354612 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctctttataaattgagagctcagaaatagtattctttactcca 36354513  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  36354512 aaactgagaatcgaatactcttctctg 36354486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 298
Target Start/End: Complemental strand, 8909185 - 8908906
Alignment:
Q  19 ggattacggtttgaactttggattttttatttatgtacattaaaaaa-ttgatcactttgagtgatggtagtgtcnnnnnnnnnnnnaagaagaagcggt 117  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||            ||||||| |||||    
T  8909185 ggattagggtttgaaatttggatttcttatttatgtacattaaaaaaattgatcactttgagtgatggtagtgtctttttttt----aagaagaggcggt 8909090  T
Q  118 agtannnnnnnctgtttgtgtttgcatgcattctaattcggtgttgcctatttctttttcatttta----atttttaaagaaaattaagaagttatagtg 213  Q
    ||||        |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    |||||||||||||||||||||||||| ||     
T  8909089 agtagtttttt-tgttggtgtttgcatgcattctaattcggtgttgcctgtttctttttcattttactttatttttaaagaaaattaagaagttatcgta 8908991  T
Q  214 tacaggcaaaactaaatcacatgtcatttttaacattataatgtctaaattaaaatgagtataggaaacataaatcttgataaag 298  Q
     | ||| |  |||||||||||| | | ||||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||    
T  8908990 cataggaaccactaaatcacatataacttttaccattataatgtctacattaaaatgaatataggaaacataagtcttgataaag 8908906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 53798449 - 53798329
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||  |||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  53798449 ttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcctacattgg 53798350  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  53798349 gtagatcacacactctagtag 53798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 41394009 - 41393858
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | |||| |||||||| ||| |||||||||||||||| ||||||||||||||    
T  41394009 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatggaaaaactagtgtaaag 41393910  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41393909 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 41393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 352 - 452
Target Start/End: Original strand, 51018753 - 51018853
Alignment:
Q  352 tgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagta 451  Q
    ||||||| ||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  51018753 tgtggagactttggaatgtacacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagta 51018852  T
Q  452 g 452  Q
    |    
T  51018853 g 51018853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 9763269 - 9763420
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| ||||| ||| |||||||||||||| ||||||||||||||||    
T  9763269 tgttggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 9763368  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
      |||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  9763369 catgaattgaaaattttatgtcccacattgagtagatcacacactctagtag 9763420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 13695908 - 13695757
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  13695908 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 13695809  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  13695808 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 13711521 - 13711370
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  13711521 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 13711422  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  13711421 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 13711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 4207122 - 4207042
Alignment:
Q  372 aacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4207122 aacacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 385 - 452
Target Start/End: Original strand, 47045700 - 47045767
Alignment:
Q  385 agaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47045700 agaaactagtgtaaagtgtgaattgaaaattttatgtcccacattggatagatcacacactctagtag 47045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 13695503 - 13695439
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||    
T  13695503 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatactcttctctg 13695439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 9763771 - 9763835
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | ||||||||||||||||||| ||||||||||| ||||||||||    
T  9763771 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatcctcttctctg 9763835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 41393584 - 41393520
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  41393584 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 41393520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 53797970 - 53797906
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | ||| ||||||||||||||||| ||||||||||| ||||||||||    
T  53797970 tataaatagagagctcgggattagcattcttcactccaaaaccgagaatcgaatcctcttctctg 53797906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 527
Target Start/End: Original strand, 51019117 - 51019191
Alignment:
Q  453 aaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||||  ||||||| |||| ||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  51019117 aaatcctctctataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 51019191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 13711010 - 13710946
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | |||||||||||||||||  |||||||||| ||||||||||    
T  13711010 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctg 13710946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 47046060 - 47046124
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| |||||||||||  |||||||||    
T  47046060 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcatcttctctg 47046124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 8920111 - 8920055
Alignment:
Q  152 aattcggtgttgcctatttctttttcattttaatttttaaagaaaattaagaagtta 208  Q
    |||| |||||||||| ||||||||| ||||||  |||| ||| ||||||||||||||    
T  8920111 aattaggtgttgcctgtttcttttttattttatgtttttaagtaaattaagaagtta 8920055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 33238572 - 33238346
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33238572 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 33238473  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33238472 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 33238373  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  33238372 aaactgagaatcgaatactcttctctg 33238346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 33243749 - 33243523
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  33243749 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaactagtgtaaag 33243650  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33243649 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 33243550  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  33243549 aaactgagaatcgaatactcttctctg 33243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 47994339 - 47994144
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994339 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 47994240  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47994239 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 47994144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 47999514 - 47999319
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47999514 ttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcgg 47999415  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47999414 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 47999319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 21080317 - 21080468
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21080317 tgttggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 21080416  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||||    
T  21080417 tgtgaattgaaaattttatgtcccacgttgggtagatcacacactctagtag 21080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 2233979 - 2234099
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||  |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  2233979 ttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 2234078  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  2234079 gtagatcacacactctagtag 2234099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 19308872 - 19309023
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  19308872 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 19308971  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19308972 tgtgaattgaaaattttatgtcccacattggatagatcacacactctagtag 19309023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 42572751 - 42572600
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  42572751 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 42572652  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  42572651 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 42572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 17496220 - 17496100
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  17496220 ttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 17496121  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  17496120 gtagatcacacactctagtag 17496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 17556994 - 17557114
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  17556994 ttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 17557093  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  17557094 gtagatcacacactctagtag 17557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 12935235 - 12935084
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  12935235 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 12935136  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  12935135 tgtgaattgaaaattttatgtcccacattgggtagatcacacactttagtag 12935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 300 - 452
Target Start/End: Original strand, 32211960 - 32212112
Alignment:
Q  300 gtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaa 399  Q
    ||||||||||||||||||||| ||        |||||||||||||||   | ||| ||| ||||| ||| ||||||||||||||||||||||||||||||    
T  32211960 gtgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaactagtgtaaa 32212059  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  32212060 gtgtgaattgaaaattttatgtctcacattgggtagatcacacactctagtag 32212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 47176492 - 47176643
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  47176492 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 47176591  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  47176592 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 47176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 43893693 - 43893542
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||| ||||||    
T  43893693 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagcgtaaag 43893594  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  43893593 tgtgaattgaaaattttatgtccctcattgggtagatcacacactctagtag 43893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 332 - 445
Target Start/End: Original strand, 16538700 - 16538813
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| ||||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |     
T  16538700 ttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattga 16538799  T
Q  432 atagatcacacact 445  Q
     |||||||||||||    
T  16538800 gtagatcacacact 16538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 332 - 445
Target Start/End: Complemental strand, 16626962 - 16626849
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| ||||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |     
T  16626962 ttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattga 16626863  T
Q  432 atagatcacacact 445  Q
     |||||||||||||    
T  16626862 gtagatcacacact 16626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 384
Target Start/End: Original strand, 47544745 - 47544828
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatgg 384  Q
    |||||||||||||||||||||||        |||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  47544745 tgttggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatgg 47544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 2234384 - 2234448
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||    
T  2234384 tataaatagagagctcgggattagtattcttcactccaaaaccgagaatcgaatcctcttctctg 2234448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 12934738 - 12934674
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  12934738 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 12934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 19309365 - 19309429
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||| ||| ||||||||||    
T  19309365 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcaaatcctcttctctg 19309429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 21080793 - 21080857
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | | |||||||||| |||||||||||||||||| ||||||||||    
T  21080793 tataaatagagagctcgggatttgcattcttcacttcaaaactgagaatcgaatcctcttctctg 21080857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 42572286 - 42572222
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  42572286 tataaatagagaactcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 42572222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 43893210 - 43893146
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||  ||||||||||| ||||||||||    
T  43893210 tataaatagagagctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctctg 43893146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 16539166 - 16539230
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||  ||| ||||||||||    
T  16539166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctg 16539230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 16626496 - 16626432
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||  ||| ||||||||||    
T  16626496 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctg 16626432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 527
Target Start/End: Original strand, 32212419 - 32212471
Alignment:
Q  475 gctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    |||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  32212419 gctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 32212471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 47176904 - 47176968
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| |||   ||||||||||||||||| || |||||||| ||||||||||    
T  47176904 tataaatagagagctcgggaatgagattcttcactccaaaaccgataatcgaatcctcttctctg 47176968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 22697768 - 22697994
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22697768 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 22697867  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22697868 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 22697967  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  22697968 aaactgagaatcgaatactcttctctg 22697994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 22702944 - 22703170
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22702944 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 22703043  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22703044 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 22703143  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  22703144 aaactgagaatcgaatactcttctctg 22703170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 301 - 524
Target Start/End: Complemental strand, 21402258 - 21402035
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21402258 tgttggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 21402159  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| |    
T  21402158 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcttgggaatagtattcatcactcaa 21402059  T
Q  501 aaactgagaatcgaatactcttct 524  Q
    ||||| ||||||||||||||||||    
T  21402058 aaactaagaatcgaatactcttct 21402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 300 - 475
Target Start/End: Original strand, 29490807 - 29490982
Alignment:
Q  300 gtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaa 399  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  29490807 gtgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaactagtgtaaa 29490906  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagag 475  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29490907 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag 29490982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 2817397 - 2817548
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2817397 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 2817496  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  2817497 tgtgaattgaaaatttaatgtcccacattgggtagatcacacactctagtag 2817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 34142932 - 34142781
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| ||||| ||| |||||||||||||| ||||||||||||||||    
T  34142932 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 34142833  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  34142832 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 34142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 34155548 - 34155397
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| ||||| ||| |||||||||||||| ||||||||||||||||    
T  34155548 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 34155449  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  34155448 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 34155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 6727773 - 6727924
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  6727773 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 6727872  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  6727873 tgtgaattgaaaattttatgttccacattgggtagatcacacactctagtag 6727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 34376615 - 34376464
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  34376615 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 34376516  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  34376515 tgtgaattgaaaattttatgtcccacattgggtagataacacactctagtag 34376464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 24190650 - 24190802
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||||||||||||||    
T  24190650 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 24190749  T
Q  401 tgtgaattgaaaa-ttttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  24190750 tgtgaattgaaaatttttatgtcccacattgggtagatcacacactctagtag 24190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 31983626 - 31983475
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| ||||| ||||||||||    
T  31983626 tgttggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaattagtgtaaag 31983527  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  31983526 tgtgaattgaaaattttatgtcccgcattgggtagatcacacactctagtag 31983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 31981904 - 31981840
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||    
T  31981904 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatactcttctctg 31981840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 34376270 - 34376206
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  34376270 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 34376206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 24191126 - 24191190
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | |||||||||||||||||  |||||||||| ||||||||||    
T  24191126 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctg 24191190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 24192223 - 24192287
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | |||||||||||||||||  |||||||||| ||||||||||    
T  24192223 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctg 24192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 525
Target Start/End: Original strand, 6728193 - 6728255
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctc 525  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| | ||||||    
T  6728193 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatccccttctc 6728255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 527
Target Start/End: Complemental strand, 34142418 - 34142366
Alignment:
Q  475 gctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    |||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  34142418 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctg 34142366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 527
Target Start/End: Complemental strand, 34155034 - 34154982
Alignment:
Q  475 gctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    |||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  34155034 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctg 34154982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 527
Target Start/End: Original strand, 29491005 - 29491040
Alignment:
Q  492 ttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29491005 ttcactccaaaactgagaatcaaatactcttctctg 29491040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 17510575 - 17510349
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17510575 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 17510476  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17510475 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 17510376  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  17510375 aaactgagaatcgaatactcttctctg 17510349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 42020090 - 42019864
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||     
T  42020090 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactaatgtaaaa 42019991  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42019990 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 42019891  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  42019890 aaactgagaatcgaatactcttctctg 42019864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 42024870 - 42024644
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||     
T  42024870 tgttggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaaa 42024771  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42024770 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 42024671  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    ||| |||||||||||||||||||||||    
T  42024670 aaattgagaatcgaatactcttctctg 42024644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 17505439 - 17505244
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  17505439 ttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaactattgtaaagtgtgaattgaaaattttatgtcccacatcgg 17505340  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17505339 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 17505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 43580146 - 43579951
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580146 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 43580047  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  43580046 gtagatcacatactctagtagaaatcctccttataaattgagagctcgggaatagtatttttcacaccaaaactgagaatcgaatactcttctctg 43579951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 41859070 - 41858877
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  41859070 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaattagtgtaaagtgtgaattgaaaattctatgtcccacatcgg 41858971  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||  ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41858970 gtagat--cacactctagtagaaattctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 41858877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 332 - 441
Target Start/End: Complemental strand, 41853955 - 41853846
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41853955 ttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattctatgtcccacatcgg 41853856  T
Q  432 atagatcaca 441  Q
     |||||||||    
T  41853855 gtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 1413100 - 1413220
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |     
T  1413100 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattga 1413199  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  1413200 gtagatcacacactctagtag 1413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 36254637 - 36254517
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||    
T  36254637 ttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattgg 36254538  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  36254537 gtagatcacacactctagtag 36254517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 300 - 452
Target Start/End: Original strand, 24770600 - 24770752
Alignment:
Q  300 gtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaa 399  Q
    ||||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| |||||||||||||||    
T  24770600 gtgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaa 24770699  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  24770700 gtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 428
Target Start/End: Complemental strand, 26709839 - 26709712
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||| ||||||||||||        ||| |||||||||||  ||||||||||||| || ||| |||||||||| ||||||||||||||||||||    
T  26709839 tgttggaacattagtgtataatggaaaaaatttgaagtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaag 26709740  T
Q  401 tgtgaattgaaaattttatgtcccacat 428  Q
    ||||||||||||||||||||||||||||    
T  26709739 tgtgaattgaaaattttatgtcccacat 26709712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 301 - 428
Target Start/End: Complemental strand, 26979573 - 26979446
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||| ||||||||||||        ||| |||||||||||  ||||||||||||| || ||| |||||||||| ||||||||||||||||||||    
T  26979573 tgttggaacattagtgtataatggaaaaaatttgaagtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaag 26979474  T
Q  401 tgtgaattgaaaattttatgtcccacat 428  Q
    ||||||||||||||||||||||||||||    
T  26979473 tgtgaattgaaaattttatgtcccacat 26979446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 24776124 - 24776206
Alignment:
Q  370 taaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  24776124 taaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 1413806 - 1413870
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||| ||||    
T  1413806 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctg 1413870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 24776563 - 24776627
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||| | | | |||||||| |||||||||| ||||||||||||||||||||||    
T  24776563 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctg 24776627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 526
Target Start/End: Complemental strand, 36254177 - 36254114
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctct 526  Q
    ||||||| ||||||| || ||| | ||||||||||||||||| ||||||||||| |||||||||    
T  36254177 tataaatagagagcttgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctct 36254114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 524
Target Start/End: Complemental strand, 26709444 - 26709383
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||||||||| | | | |||||||||||||||||||||||| |||| |||||||    
T  26709444 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttct 26709383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 524
Target Start/End: Complemental strand, 26979178 - 26979117
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||||||||| | | | |||||||||||||||||||||||| |||| |||||||    
T  26979178 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttct 26979117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 27711840 - 27711614
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27711840 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 27711741  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27711740 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 27711641  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  27711640 aaactgagaatcgaatactcttctctg 27711614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 34317841 - 34318036
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317841 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 34317940  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34317941 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 34318036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 36684271 - 36684466
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684271 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 36684370  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  36684371 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttgactccaaaactgagaatcgaatactcttctctg 36684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 37404027 - 37404222
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404027 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 37404126  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37404127 gtagatcacacactctagtagaaatcctccttataaattgagagcccgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 37404222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 37409146 - 37409341
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409146 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 37409245  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37409246 gtagatcacacactctagtataaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 37409341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 11250732 - 11250927
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250732 ttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 11250831  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||||||||||    
T  11250832 ttagatcacacactctagtagaaatcctccttataaattgagagctcgtgaatagtattctttactccaaaattgagaatcgaatactcttctctg 11250927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 27716929 - 27716734
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27716929 ttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaactagtgtaaagtgtgaattgaaatttttatgtcccacatcgg 27716830  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  27716829 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgataatcgaatactcttatctg 27716734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 5725516 - 5725365
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5725516 tgttggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 5725417  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5725416 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 5725365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 295 - 452
Target Start/End: Complemental strand, 5730928 - 5730771
Alignment:
Q  295 aaagtgtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagt 394  Q
    |||||||||| ||||||||||||||||||        |||||||||||||||  ||||||| | |||||| ||| |||||||||||||||||||||||||    
T  5730928 aaagtgtgttagaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaaactagt 5730829  T
Q  395 gtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5730828 gtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 5730771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 301 - 452
Target Start/End: Complemental strand, 3585452 - 3585301
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||     
T  3585452 tgttggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaaa 3585353  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3585352 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 48245999 - 48246119
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  48245999 ttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattaaaatttttatgtcccacattgg 48246098  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  48246099 gtagatcacacactctagtag 48246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 390
Target Start/End: Original strand, 50959011 - 50959069
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaac 390  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  50959011 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 5730446 - 5730382
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | | ||||||||||||||||| ||||||||||| ||||||||||    
T  5730446 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctg 5730382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 527
Target Start/End: Original strand, 48246427 - 48246501
Alignment:
Q  453 aaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||||  ||||||| |||| ||||| ||| | |||||||||| |||||| ||||||||||| ||||||||||    
T  48246427 aaatcctctctataaatagagacctcggaaatgggattcttcactacaaaaccgagaatcgaatcctcttctctg 48246501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 3584942 - 3584878
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||| | | | | ||||||||||||||||| ||||||||||| ||||||||||    
T  3584942 tataaatagagagctcaggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctg 3584878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 447
Target Start/End: Original strand, 50959091 - 50959124
Alignment:
Q  414 ttttatgtcccacatcggatagatcacacactct 447  Q
    ||||||||||||||||||||||||||| ||||||    
T  50959091 ttttatgtcccacatcggatagatcacgcactct 50959124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 180; Significance: 6e-97; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 4049 - 3854
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4049 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 3950  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3949 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 9e-96; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 301 - 527
Target Start/End: Complemental strand, 40392836 - 40392610
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  40392836 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaactagtgtaaag 40392737  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40392736 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 40392637  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    ||||||||||||||||||| |||||||    
T  40392636 aaactgagaatcgaatacttttctctg 40392610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 42723007 - 42723202
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723007 ttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 42723106  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42723107 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 42723202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 42728176 - 42728371
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728176 ttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 42728275  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42728276 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 42728371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 301 - 525
Target Start/End: Original strand, 44754132 - 44754355
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  44754132 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 44754230  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44754231 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 44754330  T
Q  501 aaactgagaatcgaatactcttctc 525  Q
    |||||||||||||||||||||||||    
T  44754331 aaactgagaatcgaatactcttctc 44754355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 300 - 527
Target Start/End: Complemental strand, 44096872 - 44096646
Alignment:
Q  300 gtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaa 399  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||||    
T  44096872 gtgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaactagtgtaaa 44096774  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcc 499  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  44096773 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactcc 44096674  T
Q  500 aaaactgagaatcgaatactcttctctg 527  Q
    ||||||||||||||||||||||||||||    
T  44096673 aaaactgagaatcgaatactcttctctg 44096646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 301 - 525
Target Start/End: Original strand, 44759298 - 44759521
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||| ||||||||||    
T  44759298 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaattagtgtaaag 44759396  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44759397 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 44759496  T
Q  501 aaactgagaatcgaatactcttctc 525  Q
    |||||||||||||||||||||||||    
T  44759497 aaactgagaatcgaatactcttctc 44759521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 334 - 526
Target Start/End: Complemental strand, 40520122 - 40519925
Alignment:
Q  334 ggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc-gga 432  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  40520122 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggg 40520023  T
Q  433 tagatcacacactctagtagaaatcctcctt----ataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctct 526  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40520022 tagatcacacactctagtagaaatcctccttatgaataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctct 40519925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 332 - 526
Target Start/End: Original strand, 40518076 - 40518275
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc-g 430  Q
    |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40518076 ttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 40518175  T
Q  431 gatagatcacacactctagtagaaatcctcctt----ataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctct 526  Q
    | |||||||||||||||||||||||||||||||    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  40518176 ggtagatcacacactctagtagaaatcctccttattaataaattgagagctcgtgaatagtattcttcactccaaaactgagaatcgaatactcttctct 40518275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 299 - 452
Target Start/End: Original strand, 4162889 - 4163042
Alignment:
Q  299 tgtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaa 398  Q
    |||||||||||||| ||||||||||        |||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  4162889 tgtgttggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 4162988  T
Q  399 agtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4162989 agtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 28751048 - 28751168
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28751048 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 28751147  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  28751148 gtagatcacacactctagtag 28751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 4163331 - 4163395
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | | ||||||||||||||||| ||||||||||| ||||||||||    
T  4163331 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctg 4163395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 28751483 - 28751544
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||||||||| |||   ||||||||||||||||| ||||||||||| |||||||    
T  28751483 tataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttct 28751544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 3563 - 3368
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3563 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatccg 3464  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3463 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 3368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Original strand, 80972 - 81167
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  80972 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatccg 81071  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  81072 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 81167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 1e-94; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 32011065 - 32010870
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011065 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 32010966  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32010965 gtagatcatacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 32010870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 32016239 - 32016044
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32016239 ttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 32016140  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32016139 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 32016044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 301 - 526
Target Start/End: Original strand, 2165390 - 2165616
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttga-aatttaaacacaaggatggagaaactagtgtaaa 399  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||    
T  2165390 tgttggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaactagtgtaaa 2165489  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcc 499  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2165490 gtgtgaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 2165589  T
Q  500 aaaactgagaatcgaatactcttctct 526  Q
    |||| |||||||| ||| |||||||||    
T  2165590 aaaattgagaatcaaatgctcttctct 2165616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 43998542 - 43998693
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43998542 tgttggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaactagtgtaaag 43998641  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  43998642 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 43998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 17955130 - 17955281
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        || ||||||||||||   ||||||||||||||| ||| ||||||||||||||||||||||||||| |||    
T  17955130 tgttggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtgaag 17955229  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  17955230 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 17955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 24885444 - 24885324
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  24885444 ttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 24885345  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  24885344 gtagatcacacactctagtag 24885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 42513844 - 42513995
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||| | ||| ||| |||||||||||||| ||||| ||||||||||    
T  42513844 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaaatagtgtaaag 42513943  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42513944 tgtgaattgaaaattttatgtcccacattggatagatcacacactctagtag 42513995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 21641211 - 21641273
Alignment:
Q  390 ctagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  21641211 ctagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 21641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 527
Target Start/End: Complemental strand, 24885064 - 24884990
Alignment:
Q  453 aaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||||  ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  24885064 aaatcctctctataaatagagagctcgggaatggaattcttcactccaaaaccgagaatcgaatcctcttctctg 24884990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 21643835 - 21643899
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  21643835 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 21643899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 21643020 - 21643081
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||| ||||||||||| |||||||    
T  21643020 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttct 21643081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 21643395 - 21643456
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||| ||||||||||| |||||||    
T  21643395 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttct 21643456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 527
Target Start/End: Original strand, 42514182 - 42514238
Alignment:
Q  471 gagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    |||||||||| |||   ||||||||||||||||| ||||||||||| ||||||||||    
T  42514182 gagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctg 42514238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 21641520 - 21641581
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||  ||||||||||| |||||||    
T  21641520 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttct 21641581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 21641895 - 21641956
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||  ||||||||||| |||||||    
T  21641895 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttct 21641956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 21642270 - 21642331
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||  ||||||||||| |||||||    
T  21642270 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttct 21642331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 21642645 - 21642706
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||| ||||| ||| | ||||||||||||||||  ||||||||||| |||||||    
T  21642645 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttct 21642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 43998984 - 43999048
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | |   |||||| |||| ||||||||||||||||| ||||||||||    
T  43998984 tataaatagagagctcgggatttacattctttactctaaaactgagaatcgaatcctcttctctg 43999048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 15762556 - 15762781
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  15762556 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 15762654  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15762655 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 15762754  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  15762755 aaactgagaatcgaatactcttctctg 15762781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 15767717 - 15767942
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||    
T  15767717 tgttggaacactagtgtataatgaaaaaac-ttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 15767815  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15767816 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 15767915  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  15767916 aaactgagaatcgaatactcttctctg 15767942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 20090187 - 20090413
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || ||||||  |||||||||||||||||||||||    
T  20090187 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaag 20090286  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20090287 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 20090386  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  20090387 aaactgagaatcgaatactcttctctg 20090413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 301 - 527
Target Start/End: Original strand, 20095312 - 20095538
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||  || ||||||  |||||||||||||||||||||||    
T  20095312 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaag 20095411  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactcca 500  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20095412 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 20095511  T
Q  501 aaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||    
T  20095512 aaactgagaatcgaatactcttctctg 20095538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 55129275 - 55129081
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129275 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag-atggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 55129177  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55129176 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctg 55129081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 299 - 527
Target Start/End: Complemental strand, 17369238 - 17369010
Alignment:
Q  299 tgtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaa 398  Q
    ||||||||||||||||| |||||||        || || |||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17369238 tgtgttggaacactagtatataatggaaaaaacttcgattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 17369139  T
Q  399 agtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactc 498  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17369138 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 17369039  T
Q  499 caaaactgagaatcgaatactcttctctg 527  Q
    |||||||||||||||||||||||||||||    
T  17369038 caaaactgagaatcgaatactcttctctg 17369010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 3481645 - 3481796
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3481645 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 3481744  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3481745 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 34128438 - 34128558
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34128438 ttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 34128537  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  34128538 gtagatcacacactctagtag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 332 - 452
Target Start/End: Complemental strand, 17358685 - 17358566
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||| |||||||||  |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  17358685 ttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa-tagtgtaaagtgtgaattgaaaattttatgtcccacattgg 17358587  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  17358586 gtagatcacacactctagtag 17358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 332 - 452
Target Start/End: Original strand, 30338127 - 30338247
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    |||||||||||||||   | ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  30338127 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacattgg 30338226  T
Q  432 atagatcacacactctagtag 452  Q
     ||||||||||||||||||||    
T  30338227 gtagatcacacactctagtag 30338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 30341200 - 30341351
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  30341200 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 30341299  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||||||||||||||| |||||||  | ||||||||||||||||||||    
T  30341300 tgtgaattgaaaattttatggcccacattaggtagatcacacactctagtag 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 54271428 - 54271312
Alignment:
Q  336 agtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatag 435  Q
    |||||||||||   | ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||    
T  54271428 agtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtctaaagtgtgaattgaaaattttatgtcccacattgggtag 54271329  T
Q  436 atcacacactctagtag 452  Q
    |||||||||||||||||    
T  54271328 atcacacactctagtag 54271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 300 - 452
Target Start/End: Original strand, 4116945 - 4117097
Alignment:
Q  300 gtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaa 399  Q
    ||||||||||||||||||||| ||        |||||||||||||||   | || |||  | ||| ||| ||||||||| |||| |||||||||||||||    
T  4116945 gtgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggaaacattggaatgtaaacacaatgatgaagaaactagtgtaaa 4117044  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4117045 gtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 3476257 - 3476339
Alignment:
Q  370 taaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3476257 taaacacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 17358179 - 17358115
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | | ||||||||||||||||||||||||||||| ||||||||||    
T  17358179 tataaatagagagctcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctg 17358115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 54270986 - 54270922
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||||||||    
T  54270986 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctg 54270922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 4117345 - 4117406
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttct 524  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| |||||||    
T  4117345 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttct 4117406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 3482166 - 3482230
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||| ||||| ||||    
T  3482166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctg 3482230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 30338506 - 30338570
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| | | | ||||||||||||||||| ||||||||||| ||||||||||    
T  30338506 tataaatagagagctcgggatttggattcttcactccaaaaccgagaatcgaatcctcttctctg 30338570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 34128923 - 34128987
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| ||||| |||| | | | ||||||||||||||||||||||||||||| ||||||||||    
T  34128923 tataaatagagaggtcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctg 34128987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 3476699 - 3476763
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | ||||||||||||||||   |||||||||| ||||||||||    
T  3476699 tataaatagagagctcgggaatgggattcttcactccaaaaacaagaatcgaatcctcttctctg 3476763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 525
Target Start/End: Complemental strand, 10321784 - 10321722
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctc 525  Q
    ||||||| |||||||||| | | | ||||||||||||||||| |||||| |||| ||||||||    
T  10321784 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaattgaatcctcttctc 10321722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 32084 - 31889
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32084 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 31985  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  31984 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctg 31889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 332 - 527
Target Start/End: Complemental strand, 26912 - 26717
Alignment:
Q  332 ttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 431  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26912 ttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 26813  T
Q  432 atagatcacacactctagtagaaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26812 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctg 26717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 8530 - 8681
Alignment:
Q  301 tgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaag 400  Q
    |||||||||||||||||||| ||        |||||||||||||||   | ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8530 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 8629  T
Q  401 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  8630 tgtgaatttaaaattttatgtcccacattgggtagatcacacactctagtag 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 526
Target Start/End: Original strand, 8962 - 9025
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctct 526  Q
    ||||||| |||||||||| ||| | ||||||||||||||||  ||||||||||| |||||||||    
T  8962 tataaatagagagctcgggaatgggattcttcactccaaaaacgagaatcgaatcctcttctct 9025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 72; Significance: 2e-32; HSPs: 4)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 300 - 452
Target Start/End: Original strand, 12981 - 13133
Alignment:
Q  300 gtgttggaacactagtgtataatgnnnnnnngttggagtatactagtgagtttgtggagcctttgaaatttaaacacaaggatggagaaactagtgtaaa 399  Q
    ||||||||||||||||||||| ||        |||||||||||||||   | || |||| | ||| ||| ||||||||| |||| |||||||||||||||    
T  12981 gtgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaa 13080  T
Q  400 gtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  13081 gtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 18508 - 18590
Alignment:
Q  370 taaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18508 taaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 13493 - 13557
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||||| ||| | |||||||||||||||||  |||||||||| ||||||||||    
T  13493 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctg 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 18946 - 19010
Alignment:
Q  463 tataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||| |||||||| | | | |||||||| |||||||||| ||||||||||||||||||||||    
T  18946 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctg 19010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 37712 - 37654
Alignment:
Q  394 tgtaaagtgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtag 452  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtag 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 527
Target Start/End: Complemental strand, 37361 - 37287
Alignment:
Q  453 aaatcctccttataaattgagagctcggcaatagtattcttcactccaaaactgagaatcgaatactcttctctg 527  Q
    ||||||||  ||||||| |||||||||| |||   ||||||||||||||||| ||||||||||| ||||||||||    
T  37361 aaatcctctctataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctg 37287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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