View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1204_high_7 (Length: 603)

Name: NF1204_high_7
Description: NF1204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1204_high_7
NF1204_high_7
[»] chr5 (77 HSPs)
chr5 (1-223)||(31465726-31465948)
chr5 (414-595)||(31465354-31465535)
chr5 (1-117)||(36402169-36402285)
chr5 (2-116)||(39854807-39854921)
chr5 (1-117)||(2724213-2724329)
chr5 (1-109)||(40221849-40221956)
chr5 (1-117)||(41585579-41585694)
chr5 (1-117)||(26098128-26098245)
chr5 (1-99)||(17818352-17818449)
chr5 (1-101)||(12555773-12555872)
chr5 (1-117)||(18511055-18511170)
chr5 (1-116)||(3372977-3373089)
chr5 (1-112)||(21948352-21948464)
chr5 (1-104)||(2818190-2818292)
chr5 (1-116)||(34530559-34530673)
chr5 (1-119)||(21289079-21289196)
chr5 (3-117)||(6747628-6747744)
chr5 (1-102)||(16776481-16776580)
chr5 (1-117)||(34476893-34477005)
chr5 (1-117)||(34479258-34479370)
chr5 (1-116)||(1189454-1189566)
chr5 (1-117)||(24127176-24127292)
chr5 (1-116)||(38959972-38960083)
chr5 (1-116)||(658204-658317)
chr5 (1-115)||(6756812-6756926)
chr5 (1-104)||(10474180-10474282)
chr5 (5-117)||(20505686-20505800)
chr5 (3-117)||(6745392-6745508)
chr5 (1-117)||(37705625-37705741)
chr5 (1-117)||(39798357-39798469)
chr5 (1-116)||(18469336-18469448)
chr5 (1-117)||(18596965-18597080)
chr5 (1-116)||(31179213-31179324)
chr5 (435-579)||(31482958-31483105)
chr5 (1-117)||(36208893-36209008)
chr5 (1-99)||(10750026-10750121)
chr5 (1-99)||(10757502-10757597)
chr5 (1-117)||(18467011-18467124)
chr5 (30-117)||(15354413-15354499)
chr5 (30-117)||(15356689-15356775)
chr5 (30-117)||(23665399-23665485)
chr5 (30-117)||(23793102-23793188)
chr5 (30-116)||(23741697-23741782)
chr5 (1-116)||(10528937-10529050)
chr5 (2-91)||(20045307-20045395)
chr5 (1-100)||(2175228-2175323)
chr5 (2-117)||(27910761-27910873)
chr5 (1-116)||(38882415-38882525)
chr5 (1-117)||(25804351-25804464)
chr5 (1-110)||(27912863-27912969)
chr5 (1-97)||(25921333-25921425)
chr5 (1-116)||(10587142-10587252)
chr5 (1-77)||(18509201-18509276)
chr5 (1-116)||(21684294-21684404)
chr5 (1-103)||(20043309-20043411)
chr5 (1-78)||(26098051-26098127)
chr5 (1-117)||(31543061-31543173)
chr5 (1-116)||(16092045-16092158)
chr5 (1-93)||(17073207-17073298)
chr5 (1-117)||(25904423-25904537)
chr5 (1-99)||(4236955-4237049)
chr5 (1-110)||(2954734-2954843)
chr5 (1-117)||(4410349-4410459)
chr5 (117-216)||(15445141-15445240)
chr5 (117-216)||(2144444-2144542)
chr5 (12-116)||(696205-696310)
chr5 (133-206)||(5777656-5777730)
chr5 (27-100)||(20054179-20054251)
chr5 (1-50)||(39397916-39397964)
chr5 (1-99)||(6661053-6661147)
chr5 (117-209)||(20054151-20054244)
chr5 (1-116)||(15552573-15552685)
chr5 (69-117)||(31472457-31472506)
chr5 (133-207)||(4754437-4754511)
chr5 (133-216)||(6661074-6661159)
chr5 (1-110)||(31545410-31545515)
chr5 (130-214)||(38960006-38960093)
[»] scaffold0005 (3 HSPs)
scaffold0005 (1-117)||(50343-50458)
scaffold0005 (1-116)||(52342-52456)
scaffold0005 (1-116)||(183482-183593)
[»] chr4 (103 HSPs)
chr4 (1-117)||(14789272-14789387)
chr4 (1-116)||(14787274-14787388)
chr4 (1-117)||(36921337-36921452)
chr4 (1-117)||(22802576-22802691)
chr4 (1-116)||(2891666-2891780)
chr4 (1-116)||(37312924-37313038)
chr4 (1-116)||(38928024-38928138)
chr4 (1-118)||(36919427-36919543)
chr4 (1-116)||(47563133-47563248)
chr4 (1-117)||(49088930-49089045)
chr4 (1-116)||(22800705-22800819)
chr4 (1-116)||(33415334-33415449)
chr4 (1-103)||(13547528-13547630)
chr4 (1-117)||(16453682-16453797)
chr4 (1-100)||(6133211-6133309)
chr4 (1-110)||(27499422-27499530)
chr4 (1-117)||(40091258-40091374)
chr4 (5-101)||(3824464-3824560)
chr4 (6-118)||(5101295-5101406)
chr4 (1-116)||(37089212-37089324)
chr4 (1-119)||(47868782-47868897)
chr4 (1-117)||(22782576-22782689)
chr4 (1-117)||(24446501-24446616)
chr4 (1-116)||(24889172-24889286)
chr4 (1-117)||(22780211-22780324)
chr4 (1-117)||(36378665-36378778)
chr4 (1-116)||(40637450-40637566)
chr4 (1-117)||(52942328-52942445)
chr4 (1-117)||(53405514-53405627)
chr4 (1-117)||(4215677-4215793)
chr4 (1-116)||(22044231-22044343)
chr4 (1-110)||(48486695-48486803)
chr4 (6-116)||(6765229-6765335)
chr4 (1-116)||(9148616-9148727)
chr4 (1-104)||(11435335-11435435)
chr4 (2-117)||(22132228-22132340)
chr4 (1-116)||(26085818-26085929)
chr4 (117-216)||(16185710-16185807)
chr4 (5-116)||(16455604-16455714)
chr4 (1-118)||(44599678-44599790)
chr4 (1-117)||(8631259-8631370)
chr4 (1-117)||(9173986-9174097)
chr4 (1-117)||(11437743-11437856)
chr4 (1-117)||(16931630-16931742)
chr4 (1-116)||(2484715-2484825)
chr4 (1-116)||(5635318-5635428)
chr4 (1-116)||(31849440-31849550)
chr4 (1-116)||(17662092-17662204)
chr4 (1-99)||(36380722-36380818)
chr4 (1-117)||(22046525-22046638)
chr4 (23-116)||(7941724-7941814)
chr4 (1-117)||(9176314-9176425)
chr4 (117-210)||(10113236-10113328)
chr4 (1-116)||(18709003-18709115)
chr4 (24-117)||(24348603-24348693)
chr4 (1-117)||(47210636-47210748)
chr4 (1-101)||(51015626-51015722)
chr4 (30-117)||(3937125-3937209)
chr4 (2-117)||(22134456-22134567)
chr4 (1-103)||(12395703-12395804)
chr4 (1-103)||(12400665-12400766)
chr4 (5-117)||(18847538-18847645)
chr4 (1-117)||(11006093-11006205)
chr4 (1-117)||(11008407-11008519)
chr4 (1-116)||(24879366-24879471)
chr4 (131-212)||(28454051-28454132)
chr4 (1-94)||(47275098-47275190)
chr4 (1-116)||(5198785-5198895)
chr4 (1-116)||(14633699-14633810)
chr4 (30-109)||(41997890-41997968)
chr4 (121-216)||(8756129-8756224)
chr4 (1-117)||(18409191-18409305)
chr4 (117-216)||(52043434-52043534)
chr4 (30-116)||(56030860-56030945)
chr4 (117-216)||(3982051-3982150)
chr4 (1-99)||(38409585-38409679)
chr4 (30-116)||(19323093-19323177)
chr4 (1-116)||(24880828-24880935)
chr4 (130-200)||(54906950-54907020)
chr4 (30-95)||(18534703-18534767)
chr4 (42-117)||(16933987-16934059)
chr4 (44-116)||(19096298-19096370)
chr4 (117-216)||(25358002-25358100)
chr4 (117-200)||(5516110-5516192)
chr4 (42-117)||(8756102-8756176)
chr4 (133-200)||(26557974-26558041)
chr4 (130-216)||(3578565-3578651)
chr4 (30-116)||(5664638-5664722)
chr4 (30-99)||(15032410-15032477)
chr4 (15-94)||(38270016-38270091)
chr4 (5-100)||(38890090-38890181)
chr4 (42-118)||(52043410-52043483)
chr4 (160-216)||(10114677-10114733)
chr4 (62-117)||(18311214-18311270)
chr4 (151-211)||(40998927-40998986)
chr4 (41-116)||(9864121-9864196)
chr4 (1-102)||(10113242-10113337)
chr4 (10-116)||(12102464-12102566)
chr4 (44-118)||(619296-619370)
chr4 (117-208)||(18534705-18534797)
chr4 (30-95)||(18537345-18537409)
chr4 (11-100)||(31983400-31983484)
chr4 (133-216)||(47150783-47150866)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-116)||(79516-79631)
[»] chr3 (96 HSPs)
chr3 (1-116)||(18096740-18096855)
chr3 (1-117)||(18099009-18099125)
chr3 (1-117)||(32219387-32219504)
chr3 (1-116)||(27635497-27635612)
chr3 (1-117)||(53917505-53917620)
chr3 (1-100)||(6484658-6484757)
chr3 (1-116)||(24980011-24980126)
chr3 (1-116)||(53915338-53915452)
chr3 (1-117)||(6065632-6065745)
chr3 (1-117)||(3314985-3315101)
chr3 (1-117)||(43423307-43423422)
chr3 (1-116)||(36012129-36012243)
chr3 (2-117)||(43421259-43421373)
chr3 (1-116)||(45883243-45883357)
chr3 (1-117)||(6063282-6063395)
chr3 (1-110)||(18162965-18163074)
chr3 (1-116)||(1313707-1313822)
chr3 (1-116)||(747065-747177)
chr3 (5-116)||(9604447-9604556)
chr3 (1-104)||(12267831-12267933)
chr3 (1-117)||(11168408-11168520)
chr3 (3-99)||(1626543-1626638)
chr3 (1-116)||(4308122-4308236)
chr3 (1-100)||(28181304-28181401)
chr3 (1-114)||(47701522-47701631)
chr3 (1-117)||(10621365-10621479)
chr3 (1-117)||(1321786-1321898)
chr3 (1-116)||(3307060-3307176)
chr3 (1-116)||(22114143-22114254)
chr3 (1-101)||(25688015-25688115)
chr3 (1-116)||(53468295-53468410)
chr3 (1-100)||(880312-880410)
chr3 (1-116)||(32263881-32263995)
chr3 (1-113)||(880087-880199)
chr3 (1-117)||(3859817-3859931)
chr3 (1-117)||(42990606-42990718)
chr3 (1-116)||(41849360-41849470)
chr3 (1-116)||(15781179-15781293)
chr3 (34-117)||(28101847-28101930)
chr3 (1-114)||(5191958-5192066)
chr3 (1-110)||(27101028-27101136)
chr3 (1-98)||(38890347-38890441)
chr3 (1-116)||(51674608-51674723)
chr3 (1-87)||(51943673-51943758)
chr3 (1-101)||(5886504-5886601)
chr3 (1-101)||(5899977-5900074)
chr3 (1-110)||(5926615-5926722)
chr3 (1-117)||(25533732-25533843)
chr3 (1-117)||(43226384-43226496)
chr3 (1-116)||(47148745-47148852)
chr3 (1-117)||(51726846-51726957)
chr3 (4-117)||(53591486-53591598)
chr3 (1-118)||(54691415-54691530)
chr3 (2-110)||(4666815-4666922)
chr3 (1-116)||(5522466-5522577)
chr3 (1-116)||(10191152-10191262)
chr3 (1-116)||(10955867-10955977)
chr3 (1-89)||(48361538-48361625)
chr3 (1-116)||(50494306-50494417)
chr3 (5-117)||(6232103-6232209)
chr3 (1-117)||(456215-456326)
chr3 (1-117)||(458592-458703)
chr3 (1-117)||(11170677-11170789)
chr3 (21-117)||(7606442-7606536)
chr3 (1-116)||(10084229-10084339)
chr3 (30-117)||(31151670-31151755)
chr3 (5-104)||(43228597-43228693)
chr3 (1-99)||(53893910-53894005)
chr3 (117-217)||(1620335-1620432)
chr3 (1-117)||(10958162-10958273)
chr3 (1-116)||(28761287-28761398)
chr3 (5-117)||(25389218-25389327)
chr3 (1-117)||(28412869-28412980)
chr3 (1-116)||(38210678-38210789)
chr3 (131-216)||(36871185-36871271)
chr3 (1-117)||(23633751-23633863)
chr3 (1-99)||(561640-561733)
chr3 (60-116)||(4103736-4103791)
chr3 (120-200)||(11066893-11066972)
chr3 (30-118)||(42992715-42992801)
chr3 (41-116)||(17795594-17795669)
chr3 (41-116)||(19104034-19104109)
chr3 (131-215)||(25635669-25635754)
chr3 (34-99)||(14634307-14634370)
chr3 (1-78)||(26720854-26720928)
chr3 (1-39)||(39715766-39715804)
chr3 (52-116)||(35917876-35917940)
chr3 (1-53)||(8183042-8183093)
chr3 (117-216)||(53597524-53597622)
chr3 (130-216)||(27420935-27421022)
chr3 (5-117)||(53597539-53597645)
chr3 (130-216)||(41849348-41849437)
chr3 (44-117)||(25635718-25635789)
chr3 (133-216)||(7768857-7768941)
chr3 (67-99)||(29897545-29897577)
chr3 (67-99)||(29913822-29913854)
[»] chr1 (84 HSPs)
chr1 (1-117)||(50078634-50078750)
chr1 (1-116)||(2949079-2949193)
chr1 (5-116)||(39462845-39462956)
chr1 (1-101)||(27338990-27339090)
chr1 (1-117)||(50307388-50307504)
chr1 (1-118)||(14097813-14097930)
chr1 (1-110)||(25251127-25251235)
chr1 (1-117)||(6995539-6995654)
chr1 (5-117)||(18839912-18840023)
chr1 (1-101)||(27336799-27336899)
chr1 (1-117)||(28206911-28207027)
chr1 (1-117)||(31490232-31490346)
chr1 (1-116)||(23816210-23816323)
chr1 (1-116)||(25248398-25248512)
chr1 (1-117)||(16226495-16226608)
chr1 (5-116)||(4131221-4131332)
chr1 (1-117)||(31424861-31424976)
chr1 (1-116)||(3579431-3579544)
chr1 (1-92)||(17324394-17324484)
chr1 (1-116)||(47906591-47906704)
chr1 (1-116)||(30780366-30780482)
chr1 (1-110)||(9240940-9241048)
chr1 (3-116)||(50248417-50248529)
chr1 (1-116)||(16231890-16232002)
chr1 (1-116)||(39932402-39932514)
chr1 (1-117)||(41647240-41647356)
chr1 (1-117)||(47451951-47452066)
chr1 (1-100)||(12302367-12302466)
chr1 (1-100)||(15823869-15823968)
chr1 (1-116)||(17319207-17319321)
chr1 (1-116)||(18307429-18307543)
chr1 (1-111)||(11457327-11457436)
chr1 (1-116)||(10399669-10399782)
chr1 (1-117)||(38925327-38925444)
chr1 (1-117)||(47177689-47177802)
chr1 (1-116)||(9459277-9459388)
chr1 (1-116)||(9463104-9463215)
chr1 (1-116)||(31422706-31422821)
chr1 (1-116)||(13215404-13215518)
chr1 (1-117)||(28998093-28998211)
chr1 (1-117)||(29003809-29003927)
chr1 (1-117)||(2617844-2617956)
chr1 (1-117)||(13358900-13359012)
chr1 (1-117)||(51750366-51750477)
chr1 (5-116)||(23786171-23786278)
chr1 (1-116)||(47180040-47180152)
chr1 (3-117)||(16429277-16429388)
chr1 (117-210)||(155998-156089)
chr1 (1-116)||(13762163-13762275)
chr1 (1-117)||(20291783-20291895)
chr1 (1-117)||(46431547-46431659)
chr1 (1-117)||(51757862-51757974)
chr1 (1-116)||(13447117-13447227)
chr1 (1-128)||(28842821-28842943)
chr1 (1-99)||(25860270-25860363)
chr1 (30-117)||(8348904-8348988)
chr1 (117-216)||(13125333-13125431)
chr1 (1-116)||(15294678-15294788)
chr1 (1-116)||(15916710-15916821)
chr1 (1-116)||(20302768-20302879)
chr1 (5-116)||(31735365-31735472)
chr1 (30-117)||(17185978-17186064)
chr1 (21-116)||(24326008-24326101)
chr1 (34-103)||(25128225-25128294)
chr1 (1-104)||(16432709-16432809)
chr1 (1-116)||(40134264-40134378)
chr1 (117-214)||(28279577-28279673)
chr1 (1-117)||(51752696-51752806)
chr1 (10-117)||(14183454-14183557)
chr1 (121-213)||(26332391-26332482)
chr1 (117-200)||(10116096-10116177)
chr1 (131-217)||(13127576-13127662)
chr1 (117-200)||(13433478-13433560)
chr1 (1-81)||(28841006-28841083)
chr1 (1-73)||(50076563-50076634)
chr1 (8-110)||(17324484-17324586)
chr1 (1-99)||(18800439-18800534)
chr1 (117-216)||(14183477-14183577)
chr1 (170-216)||(27916803-27916849)
chr1 (30-116)||(30790250-30790334)
chr1 (15-99)||(2510202-2510284)
chr1 (117-216)||(18800445-18800546)
chr1 (42-116)||(13125310-13125383)
chr1 (69-117)||(13785106-13785153)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-114)||(35928-36037)
[»] chr8 (53 HSPs)
chr8 (1-117)||(15068358-15068473)
chr8 (1-116)||(15073088-15073202)
chr8 (1-116)||(14808137-14808252)
chr8 (1-116)||(33541255-33541369)
chr8 (5-118)||(14477630-14477742)
chr8 (1-117)||(18811090-18811203)
chr8 (4-116)||(24873039-24873148)
chr8 (1-117)||(28283061-28283173)
chr8 (1-117)||(25952896-25953011)
chr8 (1-117)||(35872300-35872415)
chr8 (1-117)||(41383040-41383155)
chr8 (1-99)||(30480365-30480462)
chr8 (1-118)||(37214107-37214223)
chr8 (1-116)||(18813264-18813376)
chr8 (1-116)||(28251410-28251524)
chr8 (1-116)||(43082356-43082467)
chr8 (1-99)||(36865915-36866012)
chr8 (2-117)||(41385123-41385234)
chr8 (1-109)||(13858341-13858446)
chr8 (1-117)||(27827368-27827480)
chr8 (1-117)||(32339692-32339804)
chr8 (1-117)||(43530498-43530610)
chr8 (1-116)||(3883436-3883547)
chr8 (1-117)||(14419034-14419149)
chr8 (1-117)||(22684490-22684605)
chr8 (1-117)||(27911455-27911568)
chr8 (1-117)||(27957874-27957987)
chr8 (21-116)||(15809619-15809711)
chr8 (21-116)||(27829697-27829790)
chr8 (1-117)||(4424401-4424513)
chr8 (1-117)||(43079985-43080097)
chr8 (1-100)||(5372042-5372141)
chr8 (27-117)||(15956355-15956444)
chr8 (1-117)||(3874376-3874488)
chr8 (1-99)||(31162588-31162683)
chr8 (42-116)||(21482724-21482798)
chr8 (30-116)||(27106747-27106832)
chr8 (131-200)||(13985703-13985772)
chr8 (42-97)||(1225571-1225626)
chr8 (30-116)||(15185564-15185649)
chr8 (1-50)||(181853-181901)
chr8 (1-116)||(609118-609230)
chr8 (1-116)||(44721226-44721337)
chr8 (32-117)||(2467978-2468061)
chr8 (61-116)||(183255-183310)
chr8 (30-116)||(3005486-3005569)
chr8 (67-117)||(21480941-21480991)
chr8 (10-100)||(17847901-17847986)
chr8 (117-208)||(17847889-17847979)
chr8 (117-216)||(31162576-31162677)
chr8 (44-117)||(16833954-16834025)
chr8 (67-99)||(2467896-2467928)
chr8 (117-216)||(31578155-31578254)
[»] chr2 (51 HSPs)
chr2 (1-116)||(19007936-19008051)
chr2 (1-117)||(21520533-21520649)
chr2 (1-117)||(28196931-28197046)
chr2 (1-110)||(38020376-38020484)
chr2 (1-94)||(42923373-42923466)
chr2 (1-116)||(17849413-17849528)
chr2 (1-116)||(43623423-43623538)
chr2 (1-113)||(27105100-27105209)
chr2 (1-103)||(34979447-34979548)
chr2 (4-117)||(3022471-3022583)
chr2 (1-117)||(22707594-22707710)
chr2 (1-116)||(7462789-7462904)
chr2 (2-116)||(14837565-14837679)
chr2 (1-116)||(28459038-28459151)
chr2 (1-118)||(19501841-19501954)
chr2 (4-117)||(11739420-11739532)
chr2 (1-117)||(45238841-45238958)
chr2 (5-117)||(45332019-45332127)
chr2 (1-117)||(22287180-22287295)
chr2 (21-117)||(36560980-36561074)
chr2 (121-216)||(17897125-17897219)
chr2 (1-116)||(22162869-22162983)
chr2 (1-99)||(23452094-23452189)
chr2 (1-114)||(45279844-45279953)
chr2 (1-110)||(6258668-6258776)
chr2 (1-117)||(19504177-19504289)
chr2 (1-93)||(23871112-23871205)
chr2 (1-95)||(15539396-15539488)
chr2 (1-117)||(6263992-6264107)
chr2 (1-116)||(35215433-35215544)
chr2 (21-116)||(36558721-36558814)
chr2 (2-88)||(5375218-5375303)
chr2 (1-117)||(35217809-35217921)
chr2 (1-100)||(13909902-13909997)
chr2 (1-81)||(17848734-17848814)
chr2 (30-116)||(22874434-22874519)
chr2 (117-213)||(13828199-13828295)
chr2 (1-104)||(24162075-24162175)
chr2 (1-53)||(22407362-22407413)
chr2 (1-117)||(38414027-38414141)
chr2 (21-117)||(42453798-42453891)
chr2 (1-116)||(11577957-11578068)
chr2 (117-200)||(15697342-15697425)
chr2 (30-116)||(20592398-20592484)
chr2 (42-117)||(37962790-37962865)
chr2 (1-40)||(44288987-44289026)
chr2 (117-208)||(20592368-20592460)
chr2 (1-81)||(42064801-42064878)
chr2 (69-117)||(20146458-20146506)
chr2 (117-201)||(41304381-41304464)
chr2 (62-94)||(42923315-42923347)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-117)||(80190-80306)
[»] chr7 (72 HSPs)
chr7 (1-117)||(4295780-4295895)
chr7 (1-117)||(21678392-21678507)
chr7 (1-116)||(31434892-31435007)
chr7 (5-117)||(37411964-37412077)
chr7 (1-103)||(9681150-9681252)
chr7 (1-117)||(11355589-11355706)
chr7 (1-117)||(13099316-13099431)
chr7 (1-117)||(26804841-26804956)
chr7 (4-116)||(27306076-27306187)
chr7 (1-117)||(42223486-42223601)
chr7 (1-116)||(42330846-42330960)
chr7 (1-104)||(9679389-9679492)
chr7 (1-91)||(21990480-21990570)
chr7 (1-94)||(22251452-22251544)
chr7 (1-117)||(44724907-44725023)
chr7 (1-101)||(443928-444027)
chr7 (1-116)||(9027034-9027145)
chr7 (1-116)||(21680358-21680472)
chr7 (1-117)||(7471820-7471932)
chr7 (1-117)||(11759464-11759576)
chr7 (1-117)||(38394323-38394435)
chr7 (1-116)||(20299797-20299908)
chr7 (1-115)||(28487890-28488000)
chr7 (1-117)||(20297699-20297811)
chr7 (1-116)||(1606716-1606827)
chr7 (1-116)||(1850318-1850429)
chr7 (30-117)||(40550192-40550278)
chr7 (1-117)||(7351490-7351603)
chr7 (1-117)||(40836582-40836695)
chr7 (1-117)||(7094300-7094412)
chr7 (2-117)||(7349116-7349228)
chr7 (1-117)||(28485902-28486014)
chr7 (1-116)||(44901-45012)
chr7 (1-116)||(21591989-21592102)
chr7 (1-116)||(25542865-25542976)
chr7 (30-116)||(22137442-22137527)
chr7 (1-118)||(24465863-24465977)
chr7 (1-114)||(38396976-38397084)
chr7 (1-91)||(39145856-39145945)
chr7 (30-116)||(40552469-40552554)
chr7 (1-117)||(7469863-7469974)
chr7 (1-104)||(35966-36065)
chr7 (21-117)||(7092053-7092147)
chr7 (1-116)||(20626370-20626481)
chr7 (1-116)||(20630261-20630372)
chr7 (1-116)||(20642680-20642791)
chr7 (1-116)||(26295774-26295885)
chr7 (1-116)||(48457990-48458100)
chr7 (1-117)||(27832487-27832600)
chr7 (5-97)||(40946671-40946759)
chr7 (5-116)||(2935610-2935716)
chr7 (30-117)||(24748949-24749036)
chr7 (1-116)||(43253358-43253468)
chr7 (5-117)||(1049128-1049239)
chr7 (1-110)||(3036061-3036166)
chr7 (1-117)||(3878915-3879028)
chr7 (1-100)||(7188867-7188962)
chr7 (30-81)||(22108432-22108483)
chr7 (1-94)||(18345878-18345967)
chr7 (118-200)||(26214699-26214780)
chr7 (67-117)||(31153690-31153739)
chr7 (42-117)||(1046756-1046831)
chr7 (160-216)||(16296940-16296996)
chr7 (121-216)||(7188855-7188951)
chr7 (15-99)||(24813364-24813445)
chr7 (34-100)||(25276487-25276550)
chr7 (117-200)||(26210876-26210958)
chr7 (117-216)||(24748911-24749011)
chr7 (47-99)||(1502832-1502883)
chr7 (172-216)||(2990558-2990602)
chr7 (42-117)||(20136990-20137066)
chr7 (67-99)||(25357328-25357360)
[»] chr6 (59 HSPs)
chr6 (1-109)||(15346699-15346806)
chr6 (1-117)||(15367384-15367499)
chr6 (1-117)||(3631783-3631898)
chr6 (1-117)||(11982871-11982985)
chr6 (1-116)||(9020284-9020398)
chr6 (1-117)||(3394722-3394838)
chr6 (1-116)||(12195354-12195466)
chr6 (1-117)||(24338294-24338409)
chr6 (5-116)||(3629711-3629821)
chr6 (1-117)||(30728668-30728783)
chr6 (1-116)||(3233567-3233682)
chr6 (1-118)||(2628725-2628838)
chr6 (1-117)||(26932402-26932514)
chr6 (1-117)||(33309218-33309330)
chr6 (1-116)||(33311487-33311598)
chr6 (5-117)||(26068234-26068342)
chr6 (1-101)||(26065341-26065440)
chr6 (5-116)||(26065961-26066068)
chr6 (1-101)||(26085310-26085409)
chr6 (2-117)||(1230089-1230200)
chr6 (1-100)||(15530022-15530121)
chr6 (117-208)||(19696791-19696881)
chr6 (1-116)||(5273055-5273168)
chr6 (1-117)||(14458606-14458719)
chr6 (1-116)||(4816071-4816182)
chr6 (44-116)||(13057587-13057659)
chr6 (1-98)||(19704422-19704517)
chr6 (21-116)||(29754549-29754642)
chr6 (30-116)||(18322482-18322566)
chr6 (1-117)||(14507017-14507128)
chr6 (117-216)||(22869972-22870071)
chr6 (1-117)||(25480233-25480347)
chr6 (42-117)||(8717194-8717268)
chr6 (28-117)||(17012415-17012503)
chr6 (1-117)||(28241162-28241273)
chr6 (1-116)||(20915197-20915308)
chr6 (1-116)||(1069563-1069677)
chr6 (42-117)||(15540989-15541064)
chr6 (1-116)||(22611030-22611138)
chr6 (1-117)||(30034446-30034555)
chr6 (67-116)||(13040183-13040232)
chr6 (42-110)||(22491005-22491073)
chr6 (131-214)||(30443634-30443718)
chr6 (117-212)||(6610384-6610478)
chr6 (117-216)||(22611018-22611116)
chr6 (136-216)||(26505278-26505358)
chr6 (27-110)||(14466703-14466785)
chr6 (61-117)||(10584357-10584414)
chr6 (1-104)||(26945499-26945598)
chr6 (1-100)||(28078063-28078157)
chr6 (1-116)||(32280352-32280463)
chr6 (172-216)||(17904280-17904324)
chr6 (143-210)||(20527084-20527152)
chr6 (1-116)||(30967563-30967673)
chr6 (10-99)||(6610378-6610462)
chr6 (1-117)||(25465443-25465552)
chr6 (117-216)||(3629734-3629838)
chr6 (117-189)||(3918748-3918819)
chr6 (117-189)||(3919147-3919218)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-114)||(85558-85671)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-117)||(14230-14343)
scaffold0131 (70-110)||(15393-15433)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-119)||(6535-6649)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-115)||(11315-11430)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-117)||(12714-12826)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-116)||(361-473)
[»] scaffold0140 (2 HSPs)
scaffold0140 (30-117)||(24754-24840)
scaffold0140 (36-117)||(22485-22565)
[»] scaffold0370 (1 HSPs)
scaffold0370 (1-100)||(1309-1404)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-116)||(29506-29616)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-116)||(69133-69244)
[»] scaffold1674 (1 HSPs)
scaffold1674 (1-110)||(1298-1403)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-94)||(4323-4415)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-117)||(41324-41435)
[»] scaffold0250 (1 HSPs)
scaffold0250 (27-99)||(3240-3309)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-99)||(1509-1602)
[»] scaffold0891 (1 HSPs)
scaffold0891 (1-117)||(4517-4629)
[»] scaffold1899 (1 HSPs)
scaffold1899 (62-104)||(9-50)
[»] scaffold0133 (1 HSPs)
scaffold0133 (2-103)||(5136-5234)


Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31465948 - 31465726
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31465948 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgttattggtgtgattttt 31465849  T
Q  101 catcaaattcgcaacaacaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31465848 catcaaattcgcaacaacaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 31465749  T
Q  201 atagaaaacaacgagattgtgac 223  Q
    |||||||||||||||||||||||    
T  31465748 atagaaaacaacgagattgtgac 31465726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 414 - 595
Target Start/End: Complemental strand, 31465535 - 31465354
Alignment:
Q  414 ctaattttaactattattgctcatactaagtcagagagatgtagattatggatgcttttatctatattttcatattatgaatagaaaatattgttttctt 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31465535 ctaattttaactattattgctcatactaagtcagagagatgtagattatggatgcttttatctatattttcatattatgaatagaaaatattgttttctt 31465436  T
Q  514 atgattcacacgcaaaagtggttgcttctgtcctatatagcgatgtccgaagaaatagaaacgaaagtacaaaccctatgat 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31465435 atgattcacacgcaaaagtggttgcttctgtcctatatagcgatgtccgaagaaatagaaacgaaagtacaaaccctatgat 31465354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36402285 - 36402169
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  36402285 ctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttt 36402186  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  36402185 catcgaattcgcaacaa 36402169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 39854807 - 39854921
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||| ||||| |||||| ||||||||| ||||||||||||||||||    
T  39854807 tacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttattattggtgtgatttttc 39854906  T
Q  102 atcaaattcgcaaca 116  Q
    ||| |||||||||||    
T  39854907 atcgaattcgcaaca 39854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2724213 - 2724329
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||| |  |||||||||||||||||||||||||| ||||    
T  2724213 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgattttt 2724311  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||||||||||||||||    
T  2724312 tcatcaaattcgcaacaa 2724329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 40221849 - 40221956
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| | ||| ||||||||||||||||||||||||||||||||||    
T  40221849 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcctttgctccacacatcaagtttgttattggtgtgattttt 40221947  T
Q  101 catcaaatt 109  Q
    |||||||||    
T  40221948 catcaaatt 40221956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41585694 - 41585579
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  ||||  |||||||||||||||||||||||||||||||||    
T  41585694 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgccccacacatcaagtttgttattggtgtgattttt 41585596  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  41585595 catcgaattcacaacaa 41585579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26098245 - 26098128
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga--ttt 98  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  |||    
T  26098245 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgatattggtgtgagtttt 26098147  T
Q  99 ttcatcaaattcgcaacaa 117  Q
     ||||| ||||||||||||    
T  26098146 ctcatcgaattcgcaacaa 26098128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17818449 - 17818352
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  17818449 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggtttt 17818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12555872 - 12555773
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||    
T  12555872 ctacttttggcttgtgattataattgtttcatacacttt-attttggttgcttgattattccttgctccacacatcaaatttgttattggtgtgagtttt 12555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18511170 - 18511055
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| ||||||| | ||| ||||| ||||||||||||||||||||||| |||||||| |    
T  18511170 ctactttttgcttgtgtttataattgtttcatacactttg-ttttagttgcttgactatcccttgctccacacatcaagtttgttattgatgtgatttat 18511072  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  18511071 catcgaattcgcaacaa 18511055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3373089 - 3372977
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  3373089 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 3372993  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  3372992 catcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 21948352 - 21948464
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgatttt-ggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||  |||| |||||||| ||||| ||||| |||||||||||||||||||||||||||| |||     
T  21948352 ctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgttttc 21948451  T
Q  100 tcatcaaattcgc 112  Q
    ||||| |||||||    
T  21948452 tcatcgaattcgc 21948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2818292 - 2818190
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||| ||||| |||| ||||||||||||||||||||||| |||||    
T  2818292 ctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgctccatacatcaagtttgttattggtgtg-ttttt 2818194  T
Q  101 catc 104  Q
    ||||    
T  2818193 catc 2818190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34530673 - 34530559
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| ||||| ||||| |||||||||||| |||||  |||| || |||||||||||||||||||||||||||||||    
T  34530673 ctacttttgacttgtgtttataattgttccatacgctttg-ttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtgattttt 34530575  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  34530574 catcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 21289079 - 21289196
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||| ||| || ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||| ||||||||||||||||    
T  21289079 ctacttttggcttgtgtttattattcttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgattttt 21289177  T
Q  101 catcaaattcgcaacaaca 119  Q
    |||| ||||| ||| ||||    
T  21289178 catcgaattctcaagaaca 21289196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 6747628 - 6747744
Alignment:
Q  3 acttttggcttgtgtttataattgtttcatacactttga--ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||| |||||||||||   |||||||||||| |||||  |||| || ||||||||||||||||||||||||| ||| |    
T  6747628 acttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacacatcaagtttgttattggtgtgttttct 6747727  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  6747728 catccaattcgcaacaa 6747744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16776481 - 16776580
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||| |||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  16776481 ctacttttggcttgtatt-ataattgtttcatacactttg-ttttgattgcctgattattccttgctccacacatcaagtttgttattggtgtgattttt 16776578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34477005 - 34476893
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  34477005 ctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 34476910  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  34476909 catcgaattcgcaacaa 34476893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34479370 - 34479258
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||  ||||  |||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  34479370 ctacttttggcttgcattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 34479275  T
Q  101 catcaaattcgcaacaa 117  Q
    |||||||||||||||||    
T  34479274 catcaaattcgcaacaa 34479258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1189566 - 1189454
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||  ||||    
T  1189566 ctacttttggcttgtgtttataattgttccatacattttg-ttttggtggcttgattattccttgctccacacatcaagtttgatattggtgtg--tttt 1189470  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  1189469 catcgaattcacaaca 1189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24127176 - 24127292
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| ||||  | ||||| ||||| ||||||||| |||||||||||| |||||||||||    
T  24127176 ctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgctccacacattaagtttgttatttgtgtgattttt 24127275  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  24127276 catcgaattcacaacaa 24127292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38960083 - 38959972
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  38960083 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 38959988  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  38959987 catcgaattcgcaaca 38959972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 658317 - 658204
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| ||||||| |||||| | ||||||||| |||||||||| | ||||||||||| |||||||||||| |||||||||||||||| ||||    
T  658317 ctacttttggcttatgtttattattgttccgtacactttg-ttttggttgcctgattattccttgctccacacatcaaatttgttattggtgtga-tttt 658220  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  658219 catcgaattcgcaaca 658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6756812 - 6756926
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaag-tttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| | |||||  |||| ||||||||||||| ||||||||||||||| |||     
T  6756812 ctacttttggcttgtgtttataattgtttcatacactttg-ttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgtgttttc 6756910  T
Q  100 tcatcaaattcgcaac 115  Q
    ||||| ||||||||||    
T  6756911 tcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 10474282 - 10474180
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||| |||||||||||||||| |||||| ||| ||||||    
T  10474282 ctacttttcgcttgtgtttataattgttccatacactttg-ttttggttacttgattattccttgctccacacatcaagtttattattgatgtaattttt 10474184  T
Q  101 catc 104  Q
    ||||    
T  10474183 catc 10474180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 20505800 - 20505686
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgatttt--ggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttca 102  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||| | |||||| |||| |||||||||||||||||||||||||||| ||| |||    
T  20505800 ttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattggtgtgttttctca 20505701  T
Q  103 tcaaattcgcaacaa 117  Q
    |  ||||| ||||||    
T  20505700 ttgaattcacaacaa 20505686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 6745392 - 6745508
Alignment:
Q  3 acttttggcttgtgtttataattgtttcatacactttgatttt--ggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||| ||||||||||| ||||  || ||||| | |||  |||| |||||||||||||||||||||||||||| ||| |    
T  6745392 acttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacatcaagtttgttattggtgtgttttct 6745491  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  6745492 catcgaattcgcaacaa 6745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37705741 - 37705625
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    ||||||||||||||||||| ||||| || |||| |||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||     
T  37705741 ctacttttggcttgtgtttttaattattccatatactttg-ttttggttgcttggttattccttgctccacacatcaagtttgttattggtgtggttttc 37705643  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||| ||||||    
T  37705642 tcatcgaattcacaacaa 37705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39798357 - 39798469
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| |||||||||||| || ||||||||||||||||||    
T  39798357 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaaatt-gttattggtgtgattttt 39798452  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  39798453 catcgaattcgcaacaa 39798469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18469336 - 18469448
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  18469336 ctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtatgattttt 18469432  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  18469433 catcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18596965 - 18597080
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||| ||  | |||||  |||| |||| |||||||||||||||||||||||||||||    
T  18596965 ctacttttgacttgtgtttataattgttccatacacttt-attttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtgattttt 18597063  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| |||| |||||||    
T  18597064 catcgaatttgcaacaa 18597080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31179324 - 31179213
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||  ||| || ||||||||||| |||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||||||    
T  31179324 ctacttttggcttgtgttta--attattccatacactttg-ttttggttgcttaattatcccttgctccatacatcaagtt-gttattggtgtgattttt 31179229  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  31179228 catcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 435 - 579
Target Start/End: Original strand, 31482958 - 31483105
Alignment:
Q  435 catactaagtcagagagatgtagattatggatgcttttatctatattt--tcatattatgaa-tagaaaatattgttttcttatgattcacacgcaaaag 531  Q
    ||||||| || ||||||||||   |||||| ||||||||||||||| |  |||||||||||| || ||||||||| ||||||||||||||||| ||||||    
T  31482958 catactatgtaagagagatgtgatttatggttgcttttatctatatctcatcatattatgaactaaaaaatattggtttcttatgattcacacacaaaag 31483057  T
Q  532 tggttgcttctgtcctatatagcgatgtccgaagaaatagaaacgaaa 579  Q
    ||||||||||||||||||| |  ||||||  |||||  ||||||||||    
T  31483058 tggttgcttctgtcctatacaaggatgtcgaaagaagaagaaacgaaa 31483105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36208893 - 36209008
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||||||||  |||||||||| |||||||||||| |||||  |||| || ||||||||||||| |||||| ||||||||||    
T  36208893 ctacttttggcttgtgattataattgttctatacactttg-ttttggttgcttgattatcacttgctctacacatcaagtttattattgatgtgattttt 36208991  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  36208992 catcgaattcacaacaa 36209008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10750026 - 10750121
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  10750026 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttt 10750121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10757502 - 10757597
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  10757502 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttt 10757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18467011 - 18467124
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||||||| ||||| |||||| ||||| ||||| |||||||||||||||||||||| |||||||||||    
T  18467011 ctacttttggcttgtatttataact--tccatacactttg-ttttgattgcttgattatcccttgctccacacatcaagtttgttattagtgtgattttt 18467107  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  18467108 catcgaattcacaacaa 18467124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 15354499 - 15354413
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  15354499 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 15354413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 15356775 - 15356689
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  15356775 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 15356689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 23665399 - 23665485
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  23665399 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 23665485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 23793188 - 23793102
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  23793188 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 23793102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 23741782 - 23741697
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| |||||    
T  23741782 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaaca 23741697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10529050 - 10528937
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||| | ||||| ||||| | ||||||||||| |||||||||||||||||||     
T  10529050 ctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatcccttgcttcacacatcaag-ttgttattggtgtgattttc 10528954  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  10528953 tcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 20045307 - 20045395
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggt 91  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||   ||| | |||||||||||||||||||||||    
T  20045307 tacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 2175228 - 2175323
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  2175228 ctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgactttt 2175323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 27910761 - 27910873
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||| |||||| ||||||| |  | |||||||||| |||||||||| || ||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  27910761 tacttttagcttgtatttataact--tccatacacttt-attttggttgattgattatcccttgctccacacatcaaatttgttattggtgtgatttttc 27910857  T
Q  102 atcaaattcgcaacaa 117  Q
    ||| ||||| ||||||    
T  27910858 atcgaattcacaacaa 27910873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38882415 - 38882525
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  38882415 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 38882509  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  38882510 catcgaattcgcaaca 38882525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25804351 - 25804464
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| |||||||||||||||| |||    
T  25804351 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatattt 25804446  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||| ||||||||    
T  25804447 tcatcgaatacgcaacaa 25804464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27912863 - 27912969
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| |||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||  |||||||||||||||||||||||||| |||||||    
T  27912863 ctacttttagcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttactccacacatcaagtttgttattggtgggattttt 27912959  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  27912960 catcgaattc 27912969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25921425 - 25921333
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatt 97  Q
    ||||||||||||||| ||||  |||||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||    
T  25921425 ctacttttggcttgtattta--attgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10587142 - 10587252
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  10587142 ctacttttgacttgtatttataact--tccatacactttg-ttttggttgcttgattat-ccttgctccacacatcaagtttgttattggtgtga-tttt 10587236  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  10587237 catcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18509276 - 18509201
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatca 77  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || | ||| ||||| |||||||||||    
T  18509276 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21684404 - 21684294
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| | ||||  |||||| ||||||||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  21684404 ctacttttggcttttattta--attgttccatacactttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 21684310  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  21684309 catcgaattcgcaaca 21684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20043309 - 20043411
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgctt-aattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||||| | ||||  |||| |||||| |||||||||||||||| |||| |||     
T  20043309 ctacttttggcttgtgtttataattgttccatacactttg-ttttggctgcttgatttatcacttgctccacaaatcaagtttgttattgatgtgttttc 20043407  T
Q  100 tcat 103  Q
    ||||    
T  20043408 tcat 20043411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26098051 - 26098127
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaa 78  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||    
T  26098051 ctacttttggctagtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31543061 - 31543173
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||| ||||| |||||||||||| ||||  ||||| ||||||||||||| ||||||||||||||||| ||    
T  31543061 ctacttttggcttgtatttataact--ttcatacgctttg-ttttggttgcttgattaacccttgctccacacatcaag-ttgttattggtgtgattatt 31543156  T
Q  101 catcaaattcgcaacaa 117  Q
     |||| |||| ||||||    
T  31543157 gatcagattcacaacaa 31543173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16092158 - 16092045
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||| ||||| ||||||| |||| ||||||  ||||||||||| | ||| | ||| |||||| ||||||||||||||||||| | ||| |    
T  16092158 ctacttttggcttgcgtttacaattgttccatatactttg--tttggttgcttgactatccattgctccacatatcaagtttgttattggtgcgttttct 16092061  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  16092060 catcgaattcacaaca 16092045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 17073207 - 17073298
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgt 93  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||| ||||||| || ||  |||| |||||||||||| ||| ||||||||||    
T  17073207 ctacttttgacttgtgtttataattgttccatacactttg-ttttagttgcttgatcatcacttgctccacacatcaaatttattattggtgt 17073298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25904423 - 25904537
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||  |||||| | ||| |||||  ||||||||||| ||| ||| ||||||| ||| |    
T  25904423 ctacttttggtttgtgtttataattgttccatacactttg-ttttcattgcttgactatcccttgcaccacacatcaaatttatta-tggtgtgttttct 25904520  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  25904521 catcgaattcgcaacaa 25904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4236955 - 4237049
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| | ||||||||||| |||||||||||||||||||    
T  4236955 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgcttcacacatcaag-ttgttattggtgtgatttt 4237049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2954734 - 2954843
Alignment:
Q  1 ctacttttggcttgtgttt-ataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||||||  ||||||||| ||||||||||| |||||||||  | |||||  |||  |||||||||||| ||||||||||||||| |||     
T  2954734 ctacttttggcttgtgttacataattgttccatacactttg-ttttggttgtctgattatcacttactccacacatcaaatttgttattggtgtgttttc 2954832  T
Q  100 tcatcaaattc 110  Q
    ||||| |||||    
T  2954833 tcatcgaattc 2954843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4410349 - 4410459
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||| ||  |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  4410349 ctacttttggcttgtatttataact--tccatacacctt--ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 4410442  T
Q  101 catcaaattcgcaacaa 117  Q
    || | ||||||||||||    
T  4410443 caacgaattcgcaacaa 4410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 15445141 - 15445240
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa-atagaaaacaacgag 215  Q
    |||||||||||||| |||||||||| ||||||| |||||||  || |||||||| |||| ||| | || ||||||||||||||| |||||||||| ||||    
T  15445141 acaccaataaaata-cttgatgtgtggagcaaaataatcaagcaatcaaaacaacgtggatgaaaattataaacacaagcaaaagatagaaaacatcgag 15445239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 2144444 - 2144542
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||||||| ||| |||||| ||| ||| |||||||  ||| ||||||| |||||| ||| || ||||||||||||||| ||||||||| |||||    
T  2144444 acaccaataaaata-ctttatgtgtggagtaaaataatcaagcaactaaaacaatgtgggtaacaattataaacacaagcaaaagtagaaaacagcgaga 2144542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 696205 - 696310
Alignment:
Q  12 ttgtgtttataattgtttcatacactttgattttgg-ttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt-tcatcaaatt 109  Q
    |||||||||||| |||| |||||||||| ||||||| || ||| |||||  |||| |||||||||||||| |||||||||| ||||||| ||||| ||||    
T  696205 ttgtgtttataactgttccatacacttt-attttggttttcttgattatctcttgctccacacatcaagtctgttattggtatgattttctcatcgaatt 696303  T
Q  110 cgcaaca 116  Q
    | |||||    
T  696304 cacaaca 696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 5777656 - 5777730
Alignment:
Q  133 ttgatgtgtagagcaaagtaatcaatt-aaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaa 206  Q
    ||||||||| ||||||| |||||||   ||||||||||| ||||||||||||  |||||||||||||||||||||    
T  5777656 ttgatgtgtggagcaaattaatcaaagcaaccaaaacaacgtgggtgacagtcataaacacaagcaaaaatagaa 5777730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 20054179 - 20054251
Alignment:
Q  27 tttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||| |||||||||||| |||||| |||| || ||||||||||| | ||||| |||||||||||    
T  20054179 tttcatacactttg-ttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattttt 20054251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39397964 - 39397916
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttg 50  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  39397964 ctacttttggcttgagtttataattgtttcatacactttg-ttttggttg 39397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6661147 - 6661053
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||| ||||||||||||| |  | |||||||||| ||||||||||||| |||||| |||| |||||||||||| | | | ||||||||||||||    
T  6661147 ctacttttg-cttgtgtttataact--tccatacacttt-attttggttgcttgattattacttgctccacacatcaaatatttaattggtgtgatttt 6661053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 20054244 - 20054151
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaac 209  Q
    |||| ||||||||| |||||||||||||||||  | |||||||  |||||||||||||||  ||| |||| ||||||||| ||||| ||||||||    
T  20054244 acactaataaaata-cttgatgtgtagagcaagtaataatcaagcaaccaaaacaaagtgtatgaaagttataaacacaaacaaaagtagaaaac 20054151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15552573 - 15552685
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||| |||||| ||||||| |  ||||||||||||| |||| ||||||| ||||| ||||  | ||| ||||||||| ||||||||||||| ||||    
T  15552573 ctacttttagcttgtatttataact--ttcatacactttg-ttttagttgcttgattatcccttacttcacgcatcaagtt-gttattggtgtgattttt 15552668  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  15552669 tcatcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 31472506 - 31472457
Alignment:
Q  69 cacacatcaagtttgttattggtgtg-atttttcatcaaattcgcaacaa 117  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  31472506 cacacatcaagtttgttatcggtgtgtatttttcatcgaattcgcaacaa 31472457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 4754511 - 4754437
Alignment:
Q  133 ttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaa 207  Q
    ||||||| | ||| ||| |||||||  |||||||| ||||||||| ||| || ||||||||||||||| ||||||    
T  4754511 ttgatgtttggagtaaattaatcaagcaaccaaaataaagtgggtaacaattataaacacaagcaaaagtagaaa 4754437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 6661074 - 6661159
Alignment:
Q  133 ttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    ||||||||| ||||||  | |||||||  |||||||| ||||||  ||  |||| ||||||||||||||| |||||||||||||||    
T  6661074 ttgatgtgtggagcaagtaataatcaagcaaccaaaataaagtgtatggaagttataaacacaagcaaaagtagaaaacaacgaga 6661159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31545410 - 31545515
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| |||||||   |||||||| |||| |||||  |||||| ||||  ||||  ||||||||||||| ||||||||||||||||| ||    
T  31545410 ctacttttggcttgtatttataa--ctttcatacgcttt-attttaattgcttgattaacccttactccacacatcaag-ttgttattggtgtgattatt 31545505  T
Q  101 catcaaattc 110  Q
     |||| ||||    
T  31545506 aatcagattc 31545515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 38960006 - 38960093
Alignment:
Q  130 aacttgatgtgtagagcaaag--taatcaattaaccaaaacaaagtgggtgacagttttaaacacaag-caaaaatagaaaacaacga 214  Q
    |||||||||||| |||||| |  |||||||  |||||||||||||||  ||| |||| |||| ||||| ||||| |||||||||||||    
T  38960006 aacttgatgtgtggagcaagggataatcaagcaaccaaaacaaagtgtatgaaagttataaatacaagccaaaagtagaaaacaacga 38960093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 93; Significance: 5e-45; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 50343 - 50458
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  50343 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 50441  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  50442 catcgaattcgcaacaa 50458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52342 - 52456
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  52342 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 52440  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  52441 catcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 183593 - 183482
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||| |||| ||| |||||||| |||||  |||| ||||||||||||||| |||||||||||||||| |    
T  183593 ctacttttggcttgtattta--attgttccatacattttg-tttcggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttct 183498  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||| ||||    
T  183497 catcgaattcggaaca 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14789387 - 14789272
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  14789387 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 14789289  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  14789288 catcgaattcgcaacaa 14789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14787388 - 14787274
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  14787388 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 14787290  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  14787289 catcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36921452 - 36921337
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  36921452 ctacttttggcttgtgtttataattgtttcatacacttt-attttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttt 36921354  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  36921353 catcgaattcgcaacaa 36921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22802691 - 22802576
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  22802691 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 22802593  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  22802592 catcgaattcacaacaa 22802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2891666 - 2891780
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2891666 ctacttttggcttgtgtttataattgttccatacacttt-attttggttgcttgattattctttgctccacacatcaagtttgttattggtgtgattttt 2891764  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  2891765 catcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37313038 - 37312924
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| || ||||||||||||||||||||||| |||||||||||| | ||| ||||| |||||||||||||||| |||||||||||||||||    
T  37313038 ctacttttggcttatgattataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttattattggtgtgattttt 37312940  T
Q  101 catcaaattcgcaaca 116  Q
    ||||||||||||||||    
T  37312939 catcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38928138 - 38928024
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||| |||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  38928138 ctacttttggcttgtgattataactgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 38928040  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  38928039 catcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36919543 - 36919427
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  36919543 ctacttttgacttgtgtttataattgttccatacacttt-attttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttt 36919445  T
Q  101 catcaaattcgcaacaac 118  Q
    |||| |||||||| ||||    
T  36919444 catcgaattcgcagcaac 36919427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47563133 - 47563248
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||     
T  47563133 ctacttttggcttatgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggttttc 47563231  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||||||||| |||||    
T  47563232 tcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 49088930 - 49089045
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| ||||  || |||||||||||||||||||||||||||||||    
T  49088930 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttactcaacacatcaagtttgttattggtgtgattttt 49089028  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  49089029 catcgaattcgcaacaa 49089045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22800819 - 22800705
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||||    
T  22800819 ctacttttggcttgtgtttataattgttccatatactttg-ttttggttgcttgactatcccttgctccccacatcaagtttgttattggtgtgattttt 22800721  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  22800720 catcgaattcgcaaca 22800705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33415449 - 33415334
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| | ||| ||||| |||||||||||||||||||||| ||||||||| |    
T  33415449 ctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtgatttct 33415350  T
Q  101 catcaaattcgcaaca 116  Q
    ||||  ||||||||||    
T  33415349 catcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13547528 - 13547630
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||| ||| |    
T  13547528 ctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtgttttct 13547627  T
Q  101 cat 103  Q
    |||    
T  13547628 cat 13547630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16453682 - 16453797
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||| | |||||  |||| ||||||||||||||||||||||||||||||||||    
T  16453682 ctacttttggcttgtgattataactgtttcatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgattttt 16453780  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  16453781 catcgaattcacaacaa 16453797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6133211 - 6133309
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  6133211 ctacttttgacttgtgtttataattgtttcatacactttg-tttcggttgcttgattattccttgctccacacatcaagtttgttattggtgtaattttt 6133309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27499422 - 27499530
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||| |||||| ||||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||||    
T  27499422 ctacttttgacttgtgtttataattgttccataaactttg-ttttggttgcttggttattcattgctccacacatcaagtttgttattggtgtgattttt 27499520  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  27499521 catcgaattc 27499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40091374 - 40091258
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg-atttt 99  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||   ||| |||||||||||||||||||||||||||| |||||    
T  40091374 ctacttttggcttgtgtttataattattccatacacttt-attttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaatttt 40091276  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||||||||||    
T  40091275 tcatcgaattcgcaacaa 40091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 3824560 - 3824464
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||    
T  3824560 ttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttc 3824464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 5101295 - 5101406
Alignment:
Q  6 tttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatca 105  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| ||||| |||||||||||||||||||||||||||| ||| |||||     
T  5101295 tttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgatccacacatcaagtttgttattggtgtgttttctcatcg 5101393  T
Q  106 aattcgcaacaac 118  Q
    ||||| |||||||    
T  5101394 aattcacaacaac 5101406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37089324 - 37089212
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||    
T  37089324 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtttgttattggtgtgattttt 37089228  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  37089227 catcgaattcgcaaca 37089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 47868782 - 47868897
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| |||   |||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  47868782 ctacttttggcttgtatttt--attgttccatacactttgattttggttgcctgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 47868878  T
Q  101 catcaaattcgcaacaaca 119  Q
    |||| ||||||||||||||    
T  47868879 catcgaattcgcaacaaca 47868897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22782689 - 22782576
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||| ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  22782689 ctacttttggcttgtatttataact--ttcatacgctttgtttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 22782593  T
Q  101 catcaaattcgcaacaa 117  Q
    | || ||||||||||||    
T  22782592 cgtcgaattcgcaacaa 22782576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24446616 - 24446501
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||| ||||  | |||||||||||||||||||||||||| ||| |    
T  24446616 ctacttttggcttgtgtttataatttttccatacacttt-attttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttct 24446518  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  24446517 catcgaattcacaacaa 24446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24889172 - 24889286
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||| |  ||||||||||| ||||||||||||| |||||||||||||||| |||    
T  24889172 ctacttttggcttgtgattataattgttccatacactttg-ttttggttgttagattattccttgctccacacatcaag-ttgttattggtgtgatattt 24889269  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  24889270 tcatcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22780324 - 22780211
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| | ||||||| |  || |||| ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  22780324 ctacttttggcttatatttataact--ttgatacgctttgtttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 22780228  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  22780227 catcgaattcgcaacaa 22780211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36378665 - 36378778
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| | |||||||||||||||||||||||||||||  ||||||||||| |||||| |||| |||||| ||||||| | |||||||||||| ||||    
T  36378665 ctacttttcgtttgtgtttataattgtttcatacactttg--tttggttgcttgattattacttgctccacatatcaagtattttattggtgtga-tttt 36378761  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  36378762 catcgaattcgcaacaa 36378778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40637450 - 40637566
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttg-attttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-tt 98  Q
    |||||||||||||||| ||||||||||| |||||||||||  |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||    
T  40637450 ctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatatt 40637548  T
Q  99 ttcatcaaattcgcaaca 116  Q
     ||| | |||||||||||    
T  40637549 ctcaacgaattcgcaaca 40637566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 52942445 - 52942328
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||| | |||||  |||  |||||||||||| ||||||||| ||||||| |||    
T  52942445 ctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgttatttgtgtgattttt 52942346  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| |||| |||||||    
T  52942345 tcatcgaatttgcaacaa 52942328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53405514 - 53405627
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | |||||| |||| |||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||    
T  53405514 ctacttttggcttgtatttataact--tccatacattttg-ttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgattttt 53405610  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  53405611 catcgaattcgcaacaa 53405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4215677 - 4215793
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga--ttt 98  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||| | ||||||||||| |||||||| ||||||  |||    
T  4215677 ctacttttggcttgtgattataattgtttcatacactttg-tttttgttgcttgattattccttgcttcacacatcaag-ttgttatttgtgtgagtttt 4215774  T
Q  99 ttcatcaaattcgcaacaa 117  Q
     ||||| ||||||||||||    
T  4215775 ctcatcgaattcgcaacaa 4215793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22044343 - 22044231
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  22044343 ctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgttattttt 22044248  T
Q  101 c-atcaaattcgcaaca 116  Q
    | ||||||||| |||||    
T  22044247 cgatcaaattcacaaca 22044231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48486695 - 48486803
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||| ||||||| |||||  |||||||||| |||||| ||||||||||||||| ||| |    
T  48486695 ctacttttggcttgtgtttataattgttccattcactttg-ttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgtgttttct 48486793  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  48486794 catcgaattc 48486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 6765229 - 6765335
Alignment:
Q  6 tttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatca 105  Q
    |||||||||| |||||||||    ||||||||||| |||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||     
T  6765229 tttggcttgtatttataattc---catacactttg-ttttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgatttttcatcg 6765324  T
Q  106 aattcgcaaca 116  Q
    ||||| |||||    
T  6765325 aattcacaaca 6765335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9148616 - 9148727
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||||||||||||||||| |||||||||||||| ||| |    
T  9148616 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgttccacacatcaag-ttgttattggtgtgttttct 9148711  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  9148712 catcgaattcgcaaca 9148727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11435335 - 11435435
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||    
T  11435335 ctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttt 11435431  T
Q  101 catc 104  Q
    ||||    
T  11435432 catc 11435435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 22132340 - 22132228
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    |||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||| ||     
T  22132340 tacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattattg 22132244  T
Q  102 atcaaattcgcaacaa 117  Q
    |||| |||| ||||||    
T  22132243 atcagattcacaacaa 22132228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26085929 - 26085818
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||| || |    
T  26085929 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtga-ttct 26085834  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  26085833 catcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 16185710 - 16185807
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||||||| |||||||| | ||||||| |||||||  ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  16185710 acaccaataaaata-cttgatgtatggagcaaattaatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagcaaaagtagaaaacaacgaga 16185807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 16455604 - 16455714
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||| |||| || |||||| |||| ||||||||||| |||||||||| | |||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  16455604 ttttagcttatgattataactgttccatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 16455702  T
Q  105 aaattcgcaaca 116  Q
     ||||| |||||    
T  16455703 gaattcacaaca 16455714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 44599790 - 44599678
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  ||| || ||||| ||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  44599790 ctacttttgccttgtattta--attattccatacgctttg-ttttggttgcttaattat-ccttgctccacacatcaagtt-gttattggtgtgattttt 44599696  T
Q  101 catcaaattcgcaacaac 118  Q
    |||| |||||||||||||    
T  44599695 catcgaattcgcaacaac 44599678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8631370 - 8631259
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||| ||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  8631370 ctacttttggcttgtattta--attgttccatacactttg-ttttagttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 8631276  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  8631275 catcgaattcgcaacaa 8631259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9174097 - 9173986
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| |||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||| |||||| ||||    
T  9174097 ctacttttggcttgtattta--attatttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattagtgtga-tttt 9174003  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  9174002 catcgaattcgcaacaa 9173986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11437743 - 11437856
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||| ||||| |||||  |||| |||| |||||||| ||||||||||||||||||||    
T  11437743 ctacttttggcttgtattta--attgttccatacactttgtttttggctgcttgattatctcttgctccatacatcaag-ttgttattggtgtgattttt 11437839  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  11437840 catcgaattcacaacaa 11437856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16931742 - 16931630
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||| ||||| |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||    
T  16931742 ctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatcccttgctccacacattaagtt-gttattggtgtgattttt 16931647  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  16931646 catcgaattcacaacaa 16931630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2484825 - 2484715
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  2484825 ctacttttggcttgtattta--attgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 2484731  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  2484730 catcgaattcacaaca 2484715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5635428 - 5635318
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| ||||||||| || ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  5635428 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgattgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 5635334  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  5635333 catcgaattcgcaaca 5635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31849550 - 31849440
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  31849550 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 31849456  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  31849455 catcgaattcgcaaca 31849440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17662204 - 17662092
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||| |||| ||||||||||| |||||||||||  |||| |||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  17662204 ctacttttggcatgtgattataattgttccatacactttg-gtttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 17662108  T
Q  101 catcaaattcgcaaca 116  Q
    || | |||||||||||    
T  17662107 caacgaattcgcaaca 17662092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36380722 - 36380818
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| |||||| || ||| |||  |||||||||||| | | ||||||||||||||||    
T  36380722 ctacttttggcttgtgtttataattgtttcatacactttg--tttgattgcttgatcattacttactccacacatcaaatattttattggtgtgatttt 36380818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22046638 - 22046525
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  22046638 ctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 22046543  T
Q  101 c-atcaaattcgcaacaa 117  Q
    | ||| ||||| ||||||    
T  22046542 cgatcgaattcacaacaa 22046525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 7941724 - 7941814
Alignment:
Q  23 attgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||| |||||||| |||||||||||    
T  7941724 attgttccatacactttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttgttggtgtga-ttttcatcgaattcgcaaca 7941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9176425 - 9176314
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  9176425 ctacttttggcttgtattta--attattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 9176331  T
Q  101 catcaaattcgcaacaa 117  Q
    | || ||||||||||||    
T  9176330 cgtcgaattcgcaacaa 9176314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 10113328 - 10113236
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaaca 210  Q
    ||||||||||||||  ||||||||| ||||||| |||||||  |||||||||||||||||||||| || ||||||||||||||| |||| ||||    
T  10113328 acaccaataaaatat-ttgatgtgtggagcaaaataatcaagcaaccaaaacaaagtgggtgacatttataaacacaagcaaaagtagataaca 10113236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18709115 - 18709003
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgt-gatttt 99  Q
    ||||| ||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||| | ||||    
T  18709115 ctactattggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatgccttgctccacacatcaag-ttgttattggtgtggttttt 18709020  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||||||||| |||||    
T  18709019 tcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 24348603 - 24348693
Alignment:
Q  24 ttgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  24348603 ttgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaacaa 24348693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47210748 - 47210636
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||      
T  47210748 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgctttattatctcttgctccacacatcaag-ttgttattggtgtgatttca 47210653  T
Q  101 catcaaattcgcaacaa 117  Q
    || | ||||||||||||    
T  47210652 caacgaattcgcaacaa 47210636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 51015626 - 51015722
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||| |||||    
T  51015626 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttt 51015721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 3937209 - 3937125
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||  ||||||||||| ||||| ||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  3937209 catacactttg--tttggttgcttgattatcccttgctcctcacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 3937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 22134567 - 22134456
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    |||||||||||||| ||||  |||||| ||||||||||| ||||||||| || ||||| ||||| ||||||||||||| ||||||||||||||||| ||     
T  22134567 tacttttggcttgtattta--attgttccatacactttg-ttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgattattg 22134472  T
Q  102 atcaaattcgcaacaa 117  Q
    |||| |||| ||||||    
T  22134471 atcagattcacaacaa 22134456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12395804 - 12395703
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||| ||||||||||||| ||  |||| ||||| |||||||||| | |||||  |||| |||||||||||||||||||||||||||| ||| |    
T  12395804 ctacttttggcatgtgtttataatttttcgatactctttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttct 12395706  T
Q  101 cat 103  Q
    |||    
T  12395705 cat 12395703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12400766 - 12400665
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||| ||||||||||||| ||  |||| ||||| |||||||||| | |||||  |||| |||||||||||||||||||||||||||| ||| |    
T  12400766 ctacttttggcatgtgtttataatttttcgatactctttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttct 12400668  T
Q  101 cat 103  Q
    |||    
T  12400667 cat 12400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 18847538 - 18847645
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  ||| || |||||||||||  ||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| |||    
T  18847538 ttttggcttgtattta--attattccatacactttg--tttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatc 18847632  T
Q  105 aaattcgcaacaa 117  Q
    | |||| ||||||    
T  18847633 agattcacaacaa 18847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11006205 - 11006093
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| |||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||| ||||     
T  11006205 ctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttc 11006110  T
Q  101 catcaaattcgcaacaa 117  Q
     ||| ||||| ||||||    
T  11006109 gatcgaattcacaacaa 11006093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11008519 - 11008407
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| |||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||| ||||     
T  11008519 ctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttc 11008424  T
Q  101 catcaaattcgcaacaa 117  Q
     ||| ||||| ||||||    
T  11008423 gatcgaattcacaacaa 11008407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24879366 - 24879471
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgt-gatttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||          ||||||||||||||||||||||| | ||||    
T  24879366 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatt----------cacatcaagtttgttattggtgtggttttt 24879454  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  24879455 tcatcgaattcacaaca 24879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 28454132 - 28454051
Alignment:
Q  131 acttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaac 212  Q
    |||||||||||  |||||| |||||||  |||||||||||||||| ||||| || ||||||||||||||| |||||||||||    
T  28454132 acttgatgtgtgaagcaaaataatcaagaaaccaaaacaaagtggatgacaattataaacacaagcaaaagtagaaaacaac 28454051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47275098 - 47275190
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg 94  Q
    ||||||||||||||||||||||||| ||  ||||||||  |||||| |||||| ||||| ||||  ||||||||||||||||||||||| ||||    
T  47275098 ctacttttggcttgtgtttataattattctatacacttc-attttgattgcttgattatcccttactccacacatcaagtttgttattgatgtg 47275190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5198785 - 5198895
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| | ||| ||||||||||||| || |||||||||||| ||||    
T  5198785 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaag-ttattattggtgtga-tttt 5198879  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  5198880 catcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14633699 - 14633810
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||| |||| ||| |||||||| |||||  |||| ||||||||||||||| |||||||||||||||| |    
T  14633699 ctacttttggcttgtattta--attgttccatacattttg-tttcggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttct 14633794  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||| ||||    
T  14633795 catcgaattcggaaca 14633810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 41997890 - 41997968
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaatt 109  Q
    ||||||||||| |||||||||||| |||||  |||  |||||||||||||||| ||||||||||| ||||||||||||||    
T  41997890 catacactttg-ttttggttgcttgattatcactttctccacacatcaagtttattattggtgtgttttttcatcaaatt 41997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 8756129 - 8756224
Alignment:
Q  121 caataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||| |||||||||| ||||||  | |||||||  ||||||||||| ||||||||||||| ||||||||||||||| || ||||||||||||    
T  8756129 caataaaata-cttgatgtgtggagcaagtaataatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagcaaaagtaaaaaacaacgaga 8756224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18409305 - 18409191
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    ||||||||| |||||| |||||| |  | ||||||||||| |||||||||||| | |||  |||| |||||||||||||||| ||||||||||||| |||    
T  18409305 ctacttttgtcttgtgattataact--tccatacactttg-ttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattttt 18409209  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||| ||||||    
T  18409208 tcatcgaattcacaacaa 18409191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 52043434 - 52043534
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaa--caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacga 214  Q
    |||||||||||||| |||||||||| ||||| | |||||||  ||||||||  ||| ||||||||||||| ||||||||||||||  ||||||||| |||    
T  52043434 acaccaataaaata-cttgatgtgtggagcagaataatcaagcaaccaaaaaacaacgtgggtgacagttataaacacaagcaaacgtagaaaacagcga 52043532  T
Q  215 ga 216  Q
    ||    
T  52043533 ga 52043534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 56030860 - 56030945
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||| | | |||  |||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  56030860 catacactttg-ttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgatttttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 3982051 - 3982150
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaa-aatagaaaacaacgag 215  Q
    |||||||||||||| |||| ||||| ||| ||| |||||||  |||||||| |||||||||||||||| ||||||||| ||||  |||||||||| ||||    
T  3982051 acaccaataaaata-cttggtgtgtggagaaaattaatcaagcaaccaaaaaaaagtgggtgacagttataaacacaaacaaacgatagaaaacagcgag 3982149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38409585 - 38409679
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||  |||||| |||||| |||| |||| ||||||| ||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  38409585 ctacttttggcttgtattta--attgttccatacaatttg-ttttagttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgttttt 38409679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 19323093 - 19323177
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||| ||||| ||||||| |||||| |||| |||||||||||||| | |||||||||||| |||||||| ||||| |||||    
T  19323093 catacacttt-attttagttgcttgattattacttgctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24880828 - 24880935
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttg-attttggttgcttaattattccttgttccacacatcaagtttgttattggtgt-gattt 98  Q
    |||||||||||||||||||||||||||| | |||||||||  |||||||||||| ||||||          ||||||||||||||||||||||| | |||    
T  24880828 ctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattatt----------cacatcaagtttgttattggtgtggtttt 24880917  T
Q  99 ttcatcaaattcgcaaca 116  Q
    |||||| ||||| |||||    
T  24880918 ttcatcgaattcacaaca 24880935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 54907020 - 54906950
Alignment:
Q  130 aacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    |||||||||||| ||||||| |||||||  ||||||||||| |||||||||| || |||||||||| ||||    
T  54907020 aacttgatgtgtggagcaaattaatcaagcaaccaaaacaatgtgggtgacacttataaacacaagtaaaa 54906950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 18534767 - 18534703
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga 95  Q
    ||||||||||| |||||||||||| |||||| |||| |||||||||||||| | ||||||||||||    
T  18534767 catacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttattggtgtga 18534703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 16934059 - 16933987
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||||||||||||||   ||||| ||||||||| ||||| |||||||||||||||||||||| ||||| ||||||    
T  16934059 ttttggttgcttaattc--ccttgctccacacattaagtt-gttattggtgtgatttttcatcgaattcacaacaa 16933987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 19096298 - 19096370
Alignment:
Q  44 ttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||| | ||| ||||  |||||||||||| ||| ||||| ||||||||||||||| |||||||||||    
T  19096298 ttggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgcaaca 19096370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 25358100 - 25358002
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaa-aacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgag 215  Q
    |||||||||||||| |||||||||| ||| |||| ||||||  |||||| ||||| |||||  ||| || ||||||||||||||| ||||||||||||||    
T  25358100 acaccaataaaata-cttgatgtgtggaggaaagcaatcaagcaaccaataacaacgtggga-acaattataaacacaagcaaaagtagaaaacaacgag 25358003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 5516110 - 5516192
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    |||||||||||||| |||||||||| ||| ||| |||||||  ||| ||||||| || |||||||||| |||||| ||||||||    
T  5516110 acaccaataaaata-cttgatgtgtggagtaaattaatcaagcaactaaaacaacgttggtgacagttataaacagaagcaaaa 5516192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 8756176 - 8756102
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||| |||||| |||| |||||||||||||| | |||||| ||||| |||||||| ||||| ||||||    
T  8756176 ttttggttgcttgattattacttgctccacacatcaagtattttattgatgtga-ttttcatcgaattcacaacaa 8756102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 26558041 - 26557974
Alignment:
Q  133 ttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    ||||||||| ||||||| |||||||  ||||||||  | ||||||||||||| |||||||||||||||    
T  26558041 ttgatgtgtggagcaaattaatcaagcaaccaaaagtatgtgggtgacagttataaacacaagcaaaa 26557974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 3578565 - 3578651
Alignment:
Q  130 aacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||||   | |||| |||||||  ||||||||||| |||||||| |||| |||||||||  |||| |||||||||||||||    
T  3578565 aacttgatgtgcgaatcaaattaatcaagcaaccaaaacaacgtgggtgatagttataaacacaaataaaagtagaaaacaacgaga 3578651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 5664638 - 5664722
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||||| |||||| | |  |||||||||||||| | |||||||||||| |||||||| ||||| |||||    
T  5664638 catacactttg-ttttggttgcttgattattaccttctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 15032477 - 15032410
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||  ||||||||||| |||||| |||| ||| |||||||||| | ||||||||||||||||    
T  15032477 catacactttg--tttggttgcttgattattacttgctccgcacatcaagtattttattggtgtgatttt 15032410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 38270091 - 38270016
Alignment:
Q  15 tgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg 94  Q
    |||||||||||||| |||||   ||| |||||||||||| | ||| ||||  ||||||||||||||||||||||||||||    
T  38270091 tgtttataattgttccatac---ttg-ttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtg 38270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 38890181 - 38890090
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||| ||||||||||||| |  | |||||||||||  ||||||||||  ||||||||||| |||||| ||||| | | |||||||||||||||||    
T  38890181 ttttgccttgtgtttataact--tccatacactttg--tttggttgctagattattccttgctccacatatcaaatattttattggtgtgattttt 38890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 52043483 - 52043410
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaac 118  Q
    |||||||||||| |||||||  || |||||||||||||| | ||||||||||||||||| | ||||||| |||||||    
T  52043483 ttttggttgcttgattattc--tgctccacacatcaagtattttattggtgtgattttt-aacaaattcacaacaac 52043410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 10114733 - 10114677
Alignment:
Q  160 aaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||||||||||||| |||| |||||||||| |||  |||| ||||||||||    
T  10114733 aaccaaaacaaagtgggtgatagttataaacacaagaaaaggtagataacaacgaga 10114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 18311270 - 18311214
Alignment:
Q  62 cttgttccacacatcaagtttgttattggtgtgat-ttttcatcaaattcgcaacaa 117  Q
    |||| |||||||||||||||| ||||||||||||| |||||||| ||||| ||||||    
T  18311270 cttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaacaa 18311214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 40998927 - 40998986
Alignment:
Q  151 taatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaa 211  Q
    |||||||  ||||||||||| ||||||||||||| |||||||||| |||| ||||||||||    
T  40998927 taatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagtaaaagtagaaaacaa 40998986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 9864121 - 9864196
Alignment:
Q  41 attttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||| ||| ||||||  || ||||||||||||||| | |||||| |||||||||||| | ||||| |||||    
T  9864121 attttggtttcttgattattttttcttccacacatcaagtattttattgatgtgatttttcaacgaattcacaaca 9864196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 10113242 - 10113337
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||| |||  ||  ||||||| |||||||||||| ||||||  ||| |||||||||||| | | |||||||||||||||||    
T  10113242 ctacttttg-cttgtgtttataaatgt--cacccactttg-ttttggttgcttgattatt--ttgctccacacatcaaatattttattggtgtgattttt 10113335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 12102464 - 12102566
Alignment:
Q  10 gcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaatt 109  Q
    |||||||||||||| |  | ||||||||||| |||||||||||   ||||| |||| ||||||||||||||   |||||||||||| |||||||| ||||    
T  12102464 gcttgtgtttataact--tccatacactttg-ttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtga-ttttcatcgaatt 12102559  T
Q  110 cgcaaca 116  Q
    | |||||    
T  12102560 cacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 619370 - 619296
Alignment:
Q  44 ttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaac 118  Q
    |||||||||| | ||| ||||  |||||||||||| ||| ||||||||||| ||| ||||| ||| |||||||||    
T  619370 ttggttgcttgactatcccttactccacacatcaaatttattattggtgtgttttctcatcgaatccgcaacaac 619296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 18534705 - 18534797
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaa 208  Q
    |||||||||||||| |||||||||| ||||||  | |||||||  |||||||||||||||  ||  |||| ||||||||| ||||| |||||||    
T  18534705 acaccaataaaata-cttgatgtgtggagcaagtaataatcaagcaaccaaaacaaagtgtatggaagttataaacacaaacaaaagtagaaaa 18534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 18537409 - 18537345
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga 95  Q
    ||||||||||| ||||| |||||| |||||| |||| |||||||||||||| | |||| |||||||    
T  18537409 catacactttg-ttttgattgcttgattattacttgctccacacatcaagtattttataggtgtga 18537345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 31983484 - 31983400
Alignment:
Q  11 cttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||| |   ||| ||||| |||||||||| ||||||  ||| |||||||||||| | | |||||| ||||||||||    
T  31983484 cttgtgtttataattgttcc---cacgttgatattggttgcttgattatt--ttgctccacacatcaaatattttattgatgtgattttt 31983400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 47150783 - 47150866
Alignment:
Q  133 ttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    ||||||||| |||||||||||||||  |||||||| ||| |||||  ||| || ||||||||| ||||| ||||| |||||||||    
T  47150783 ttgatgtgtggagcaaagtaatcaagcaaccaaaatcaatgtggg-aacaattataaacacaaacaaaagtagaagacaacgaga 47150866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 79516 - 79631
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  79516 ctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtgtgattttt 79615  T
Q  101 catcaaattcgcaaca 116  Q
    |||  |||||||||||    
T  79616 cattgaattcgcaaca 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18096855 - 18096740
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  18096855 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtaattttt 18096756  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  18096755 catcgaattcgcaaca 18096740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18099125 - 18099009
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  18099125 ctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 18099026  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  18099025 catcgaattcccaacaa 18099009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32219387 - 32219504
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| ||||    
T  32219387 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgattttt 32219486  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||| ||||||    
T  32219487 tcatcgaattcacaacaa 32219504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27635612 - 27635497
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||     
T  27635612 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttc 27635514  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||| ||||||    
T  27635513 tcatcgaatttgcaaca 27635497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53917620 - 53917505
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||| |||||||||||||||||||||| |||||||||||    
T  53917620 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattagtgtgattttt 53917522  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| | ||||||||||    
T  53917521 catcgatttcgcaacaa 53917505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6484658 - 6484757
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  6484658 ctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgttattagtgtgattttt 6484757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24980011 - 24980126
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||| |    
T  24980011 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgttttct 24980110  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  24980111 catcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 53915452 - 53915338
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||| | ||| ||||| |||| |||||||||||||||||||||||||||||    
T  53915452 ctacttttggcttgtgtttataattgtttcatacacttgg-ttttggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgattttt 53915354  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  53915353 catcgaattcgcaaca 53915338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6065745 - 6065632
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  6065745 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 6065649  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  6065648 catcgaattcgcaacaa 6065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3314985 - 3315101
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||| |||||||||||||||| ||||||||||| ||| |    
T  3314985 ctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgttttct 3315084  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  3315085 catcgaattcgcaacaa 3315101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43423422 - 43423307
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| ||||| |||||||||||| |||||||||||||| ||||||    
T  43423422 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaactttgttattggtgtaattttt 43423324  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  43423323 catcgaattcgcaacaa 43423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36012129 - 36012243
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||| || ||||| ||||| |||| |||||||||||||||||||||||||||||    
T  36012129 ctacttttcgcttgtgtttataattgttccatacactttg-ttttggttgtttgattatcccttgctccatacatcaagtttgttattggtgtgattttt 36012227  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  36012228 catcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 43421373 - 43421259
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||  |||| |||||||||||| ||||||||||||||||||||||    
T  43421373 tacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatatcttgctccacacatcaactttgttattggtgtgatttttc 43421275  T
Q  102 atcaaattcgcaacaa 117  Q
    ||| ||||||||||||    
T  43421274 atcgaattcgcaacaa 43421259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 45883243 - 45883357
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  45883243 ctacttctggcttgtgattataattgttccatacactttg-ttttggttgcttaactatcccttgctccacacatcaagtttgttattggtgtgattttt 45883341  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||| ||||||    
T  45883342 catcgaatttgcaaca 45883357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6063395 - 6063282
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  6063395 ctacttttggcttgtatttataact--ttcatacgctttgattttggttgcttaattatcccttgttccacacatcaag-ttgttatcggtgtgattttt 6063299  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  6063298 catcgaattcgcaacaa 6063282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18162965 - 18163074
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||  |||||||||||| ||| |||||||||||||||||    
T  18162965 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtgattttt 18163064  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  18163065 catcgaattc 18163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1313707 - 1313822
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  1313707 ctacttttgacttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgagtttt 1313805  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  1313806 tcatcgaattcgcaaca 1313822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 747065 - 747177
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  747065 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 747161  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  747162 catcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 9604556 - 9604447
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||| |||| ||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9604556 ttttggcctgtgattataattgtttcatacactttggttt-ggttacttgattattccttgctccacacatcaagtt-gttattggtgtgatttttcatc 9604459  T
Q  105 aaattcgcaaca 116  Q
     |||||||||||    
T  9604458 gaattcgcaaca 9604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12267933 - 12267831
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||| || |||||||||||| |||||||||||||| ||||||    
T  12267933 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactattccctgctccacacatcaaatttgttattggtgtaattttt 12267835  T
Q  101 catc 104  Q
    ||||    
T  12267834 catc 12267831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11168408 - 11168520
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  11168408 ctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 11168503  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  11168504 catcgaattcgcaacaa 11168520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 1626638 - 1626543
Alignment:
Q  3 acttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  1626638 acttttgacttgtgtttataattgttccatacactttgtttttg-ttgcttgattattccttgctccacacatcaagtttgttattggtgtggtttt 1626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4308236 - 4308122
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||||| |  ||||||||||| ||||||||||||| |||||||||||||||| |||    
T  4308236 ctacttttggcttgtgattataattgttccatacactttg-ttttggttgttggattattccttgctccacacatcaag-ttgttattggtgtgatattt 4308139  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  4308138 tcatcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28181304 - 28181401
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||| | ||||| ||||||||||||||||||||||||||||||||||    
T  28181304 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgattgt-ccttgctccacacatcaagtttgttattggtgtgattttt 28181401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 47701631 - 47701522
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||| ||||||| |||||| |||| ||   |||||||||||||||||||||||||||||    
T  47701631 ctacttttggcttgtgttcataattgttccatacactttg-ttttcgttgcttgattattacttgatc---acatcaagtttgttattggtgtgattttt 47701536  T
Q  101 catcaaattcgcaa 114  Q
    |||| |||||||||    
T  47701535 catcgaattcgcaa 47701522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10621479 - 10621365
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgatttt-ggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||| |||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  10621479 ctacttttggcttgtatttataact--ttcatacactttggtttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttt 10621383  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||| ||||||    
T  10621382 tcatcgaattcacaacaa 10621365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1321786 - 1321898
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  1321786 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga-tttt 1321881  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  1321882 catcgaattcgcaacaa 1321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3307060 - 3307176
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaag-tttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||| ||||| | || |||||||| ||||||||||||||| |||     
T  3307060 ctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgtgttttc 3307159  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  3307160 tcatcgaattcacaaca 3307176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22114254 - 22114143
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||| ||||||||||| ||||    
T  22114254 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgctattggtgtga-tttt 22114159  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  22114158 catcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25688115 - 25688015
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||  | |||||  |||| ||||||||| ||||||||||||||||||| ||||    
T  25688115 ctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgctccacacataaagtttgttattggtgtgagtttt 25688016  T
Q  101 c 101  Q
    |    
T  25688015 c 25688015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 53468410 - 53468295
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||  ||||||| ||| |||||||||||||||||||||||||||| ||||     
T  53468410 ctacttttgacttgtgtttataattgttccatacactttg-ttttggctgctccattattcattgctccacacatcaagtttgttattggtgtggttttc 53468312  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||| ||||||    
T  53468311 tcatcgaatttgcaaca 53468295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 880410 - 880312
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||| |||||| |||| ||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||| ||||||||||||    
T  880410 ctacttttggtttgtgattataactgttccatacactttg-ttttggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtgattttt 880312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32263995 - 32263881
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||  | |||||  |||| |||||||||||| ||||||||| |||||||||||    
T  32263995 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtctgattatcacttgctccacacatcaaatttgttattagtgtgattttt 32263897  T
Q  101 catcaaattcgcaaca 116  Q
    | || ||||| |||||    
T  32263896 cttcgaattcacaaca 32263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 880199 - 880087
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||| ||||| |||||| |||||||||||||||| ||||  |||||| ||||||||||  |||||||||||||||| |||||||||||| ||||    
T  880199 ctacttttggtttgtgattataactgtttcatacactttg-ttttctttgcttgattattccttactccacacatcaagtttattattggtgtgactttt 880101  T
Q  100 tcatcaaattcgca 113  Q
    ||||| ||||||||    
T  880100 tcatcgaattcgca 880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3859817 - 3859931
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||| ||||    
T  3859817 ctacttttggcttgtattt-taattgtttcatacactttg-ttttggttgcttaactatcccttattccacacatcaag-ttgttattggtgtgactttt 3859913  T
Q  101 c-atcaaattcgcaacaa 117  Q
    | ||| ||||| ||||||    
T  3859914 cgatcgaattcacaacaa 3859931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 42990606 - 42990718
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  42990606 ctacttttggcttgtatttataact--tacatacactttg-ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga-tttt 42990701  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  42990702 catcgaattcgcaacaa 42990718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41849360 - 41849470
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  41849360 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 41849454  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  41849455 catcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15781179 - 15781293
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||| |||| |||||||||| ||||||  ||||| ||||| ||||  |||||||||||||||||||||||||||| ||||     
T  15781179 ctacttttgacttgtgtttataactgttccatacacttt-attttgcctgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttc 15781277  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  15781278 catcgaattcacaaca 15781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 28101930 - 28101847
Alignment:
Q  34 cactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||||| |||||||||| ||||| ||||||    
T  28101930 cactttgattttggttgcttgattatcccttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaacaa 28101847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 5191958 - 5192066
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  5191958 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 5192052  T
Q  101 catcaaattcgcaa 114  Q
    |||| |||||||||    
T  5192053 catcgaattcgcaa 5192066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27101136 - 27101028
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    |||||||| ||||||| ||||||||||| ||||||||||| |||||||||| | ||||||| ||| ||||||||||||| |||||||||||||||| |||    
T  27101136 ctactttttgcttgtgattataattgttccatacactttg-ttttggttgcctgattattcattgctccacacatcaag-ttgttattggtgtgatattt 27101039  T
Q  100 tcatcaaattc 110  Q
    ||||| |||||    
T  27101038 tcatcgaattc 27101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38890347 - 38890441
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattt 98  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  38890347 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 51674723 - 51674608
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacact-ttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||| ||||| ||||| |  |||  ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  51674723 ctacttttggcttgtgtttatatttgttccatacccacttg--tttggttgcttgattattccttgctccatacatcaagtttgttattggtgtgatttt 51674626  T
Q  100 -tcatcaaattcgcaaca 116  Q
     ||||| ||||| |||||    
T  51674625 ctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51943673 - 51943758
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttat 87  Q
    |||||||||||||||||||||||||||| || |||||||| |||||||||||| | ||| ||||| |||||||||||||||||||||    
T  51943673 ctacttttggcttgtgtttataattgttccaaacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5886504 - 5886601
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||| |||| |||||||||||  |||||||||||  |||| ||||| ||||||||||||| ||||||||||||||||||||    
T  5886504 ctacttttggcttgtgattataactgttccatacactttg--tttggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgattttt 5886600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5899977 - 5900074
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||| |||| |||||||||||  |||||||||||  |||| ||||| ||||||||||||| ||||||||||||||||||||    
T  5899977 ctacttttggcttgtgattataactgttccatacactttg--tttggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtgattttt 5900073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5926722 - 5926615
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| | ||||||||| |||||||| ||| ||||||||||  | ||||||| ||||||||||||||||||| ||||    
T  5926722 ctacttttg-cttgtgtttataattgttccttacactttg-ttttggttacttgattattccttacttcacacatgaagtttgttattggtgtgagtttt 5926625  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  5926624 catcgaattc 5926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25533732 - 25533843
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| || ||  |||| ||||||||||||||| ||||||||||||||||||    
T  25533732 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgat-atctcttgctccacacatcaagtt-gttattggtgtgattttt 25533826  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  25533827 catcgaattcgcaacaa 25533843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43226384 - 43226496
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||| |||||||| |||||||||   |||||||||||| |||||  |||| ||||||||||||||| |||||||||||||||| |    
T  43226384 ctacttttggcttgtattt-taattgttccatacacttg--ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttct 43226479  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  43226480 catcgaattcgcaacaa 43226496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47148852 - 47148745
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| ||||||||||| ||||||||| || ||||| ||       |||||||||||||||||||||||||| ||||    
T  47148852 ctacttttgacttgtgtttataattgttccatacactttg-ttttggttgtttgattatccc-------acacatcaagtttgttattggtgtgagtttt 47148761  T
Q  101 catcaaattcgcaaca 116  Q
    |||||||||| |||||    
T  47148760 catcaaattcacaaca 47148745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 51726957 - 51726846
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||| | |||||| ||||  |||||||||||| ||||||||||||||| ||||    
T  51726957 ctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatt-cttgccccacacatcaag-ttgttattggtgtga-tttt 51726863  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  51726862 catcgaattcgcaacaa 51726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 53591486 - 53591598
Alignment:
Q  4 cttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcat 103  Q
    |||||| ||| |||||||||||||| |||||| |||| |||||||||||| ||||| |||||||||||||||||| |||||||||| |||| ||| ||||    
T  53591486 cttttgacttatgtttataattgttccatacattttg-ttttggttgcttgattatcccttgttccacacatcaaatttgttattgatgtgttttctcat 53591584  T
Q  104 caaattcgcaacaa 117  Q
      ||||| ||||||    
T  53591585 tgaattcacaacaa 53591598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 54691530 - 54691415
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||| | |||||  |||| ||||||||| || |||||||||| |||| ||| |    
T  54691530 ctacttttggcttgtgtttataattgtttcatacattttg-ttttggttgcctgattatcacttgctccacacat-aaatttgttattgatgtgttttct 54691433  T
Q  101 catcaaattcgcaacaac 118  Q
    |||| ||||| |||||||    
T  54691432 catcgaattcacaacaac 54691415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 4666815 - 4666922
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||||| | || ||  |||  |||||||||||| ||| ||||||||||||||||||    
T  4666815 tacttttggtttgtttttataattgtttcatacacttt-attttggttgcatgataatcacttactccacacatcaaatttattattggtgtgatttttc 4666913  T
Q  102 atcaaattc 110  Q
     ||||||||    
T  4666914 ttcaaattc 4666922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5522577 - 5522466
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||| |||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  5522577 ctacttttggcttgtatttataact--ttcttacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtga-tttt 5522482  T
Q  101 catcaaattcgcaaca 116  Q
    || | |||||||||||    
T  5522481 caacgaattcgcaaca 5522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10191262 - 10191152
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||  ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  10191262 ctacttttggcttgtattta--attgtcccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 10191168  T
Q  101 catcaaattcgcaaca 116  Q
    ||||| ||||||||||    
T  10191167 catcagattcgcaaca 10191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10955977 - 10955867
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  10955977 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 10955883  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  10955882 catcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48361625 - 48361538
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattg 89  Q
    ||||||||| |||||| ||||||||||| ||||||||||| |||||||||||| ||||||| |||||||| |||| |||||||||||||    
T  48361625 ctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattcattgttccatacattaagtttgttattg 48361538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 50494306 - 50494417
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||| ||||| ||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||    
T  50494306 ctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgattttt 50494401  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  50494402 catcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 6232103 - 6232209
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||| |    |||||||||||| ||||||||| |||||| ||||||||    
T  6232103 ttttgacttgtgtttataattgttccatacacttt-attttggttgcttgattattac----tccacacatcaaatttgttattagtgtga-ttttcatc 6232196  T
Q  105 aaattcgcaacaa 117  Q
     ||||||||||||    
T  6232197 gaattcgcaacaa 6232209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 456215 - 456326
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||| ||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  456215 ctacttttggcttgtatttataact--ttcatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 456309  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  456310 catcgaattcacaacaa 456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 458592 - 458703
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||| ||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  458592 ctacttttggcttgtatttataact--ttcatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 458686  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  458687 catcgaattcacaacaa 458703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11170677 - 11170789
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || |||||||||||||||||||||||| ||||| ||||  ||||||||||||| ||||||||  ||||| ||||    
T  11170677 ctacttttggcttgtattta--attattccatacactttgattttggttgcttgattatcccttactccacacatcaag-ttgttattaatgtga-tttt 11170772  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  11170773 catcgaattcgcaacaa 11170789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 7606536 - 7606442
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||| |||||||||||||||||||||||| | |||  |||| ||||||||||||| ||||||||||||| |||||||||| |||| |||||||    
T  7606536 taattgttccatacactttgattttggttgcttgactatctcttgctccacacatcaag-ttgttattggtgt-atttttcatcgaatttgcaacaa 7606442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10084339 - 10084229
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||  ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  10084339 ctacttttggcttgtattta--attgtcccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 10084245  T
Q  101 catcaaattcgcaaca 116  Q
    ||||  ||||||||||    
T  10084244 catcggattcgcaaca 10084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 31151670 - 31151755
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||||||||| |||||||||||| |||||| |||| |||||||||||||| | ||||||||||||||||||||| ||||| ||||||    
T  31151670 catacactttg-ttttggttgcttgattattacttgctccacacatcaagtat-ttattggtgtgatttttcatcgaattcacaacaa 31151755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 43228597 - 43228693
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||| |||||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| |||||||||||||||||| |||||    
T  43228597 ttttggcttgtattt-taattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttctcatc 43228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53894005 - 53893910
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||| ||| | ||||| || ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  53894005 ctacttttggctt-tgtatttaattattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 53893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 1620335 - 1620432
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    ||||||||||||  ||||||| ||| ||| ||| |||||||  ||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||||    
T  1620335 acaccaataaaa--acttgatatgtggagaaaattaatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagcaaaagtagaaaaccacgaga 1620431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10958273 - 10958162
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||||||  |||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  10958273 ctacttttggcttgtattta--attgttctatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 10958179  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  10958178 catcgaattcacaacaa 10958162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28761398 - 28761287
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||| ||||||||  | |||||||||| |||||||||| || |||||  |||| ||||||||||||| || |||||||||||||||||    
T  28761398 ctacttttg-cttgtgattataatt--tccatacacttt-attttggttgtttgattatcacttgctccacacatcaagattattattggtgtgattttt 28761303  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  28761302 catcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 25389218 - 25389327
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttttcat 103  Q
    ||||||||||| ||||  ||| || ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||| ||| ||||||||    
T  25389218 ttttggcttgtattta--attattccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtatgattttttcat 25389313  T
Q  104 caaattcgcaacaa 117  Q
    | ||||| ||||||    
T  25389314 cgaattcacaacaa 25389327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28412980 - 28412869
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||||| |  |||||||||||   |||||||| ||| ||||| ||||| ||||||||||||||| |||||||||||| |||||    
T  28412980 ctacttttgacttgtatttataact--ttcatacacttg--ttttggttacttgattatcccttgctccacacatcaagtt-gttattggtgtgtttttt 28412886  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  28412885 catcgaattcacaacaa 28412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38210678 - 38210789
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||| ||||| ||||| ||| || || || ||||| ||||||||||||||| ||||||||||||||||||    
T  38210678 ctacttttggcttgtattta--attattccatacgctttg-ttttgtttgtttgataatcccttgctccacacatcaagtt-gttattggtgtgattttt 38210773  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  38210774 catcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 36871185 - 36871271
Alignment:
Q  131 acttgatgtgtagagcaa-agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa-atagaaaacaacgaga 216  Q
    ||||||||||| |||||| | |||||||  ||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||    
T  36871185 acttgatgtgtggagcaagaataatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagcaaaagatagaaaacagcgaga 36871271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23633751 - 23633863
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||| |||||||||||||||| |  | ||||||||||| |||||||||||| ||| |  |||| | |||||||| ||| | |||||||||||||||||    
T  23633751 ctacttgtggcttgtgtttataaat--tccatacactttg-ttttggttgcttgattttcacttgcttcacacatctagtat-ttattggtgtgattttt 23633846  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  23633847 catcgaattcacaacaa 23633863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 561733 - 561640
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||| ||||||||||||| |  | |||||||||||  ||||||||||| |||||| |||  |||||||||||||| | ||||||||||||||||    
T  561733 ctacttttg-cttgtgtttataact--tccatacactttg--tttggttgcttgattattacttactccacacatcaagtattttattggtgtgatttt 561640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 4103791 - 4103736
Alignment:
Q  60 tccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  4103791 tccttgctccacgcatcaagtttgttattggtgtga-ttttcatcgaattcgcaaca 4103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 11066972 - 11066893
Alignment:
Q  120 ccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    ||||||||||| |||| | ||| ||||||| |||||||  ||||||||||| || |||||||||| |||||||||||||||    
T  11066972 ccaataaaata-cttgttttgtcgagcaaattaatcaagcaaccaaaacaatgtaggtgacagttataaacacaagcaaaa 11066893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 42992715 - 42992801
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaac 118  Q
    ||||||||||| |||||||||  | ||||| ||||| || ||||||||||||||||||| |||||| |||||||| ||||| |||||||    
T  42992715 catacactttg-ttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtga-ttttcatcgaattcacaacaac 42992801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 17795594 - 17795669
Alignment:
Q  41 attttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||||| | |||   ||| |||||||||||| ||| ||||||||||||||||||||| ||||| |||||    
T  17795594 attttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaaca 17795669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 19104034 - 19104109
Alignment:
Q  41 attttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||||| | |||   ||| |||||||||||| ||| ||||||||||||||||||||| ||||| |||||    
T  19104034 attttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaaca 19104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 25635754 - 25635669
Alignment:
Q  131 acttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgag 215  Q
    ||||||||||| ||||||  | |||||||  |||||| |||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  25635754 acttgatgtgtggagcaagtaataatcaagcaaccaatacaa-gtgggtaacagttataaacacaagcaaaagtagaaaacaacgag 25635669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 14634370 - 14634307
Alignment:
Q  34 cactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||| |||||||||| |||| |  |||||||||||||||||| | ||||||||||||||||    
T  14634370 cactttgatattggttgctttattaat--ttgttccacacatcaagtattttattggtgtgatttt 14634307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26720854 - 26720928
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaa 78  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||| ||||||||||||    
T  26720854 ctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39715766 - 39715804
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacacttt 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  39715766 ctacttttggcttgtgtttataattgttccatacacttt 39715804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 35917940 - 35917876
Alignment:
Q  52 ttaattattccttgttccacacatcaagtttgttattggtgtgattttt-catcaaattcgcaaca 116  Q
    |||||||| |||||||||| |||||||||| ||||||||||| |||||| |||| |||||||||||    
T  35917940 ttaattatcccttgttccatacatcaagtt-gttattggtgtaattttttcatcgaattcgcaaca 35917876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8183093 - 8183042
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgctt 53  Q
    ||||||||| |||||||||||||||||| ||||||| || |||||||||||||    
T  8183093 ctacttttgacttgtgtttataattgttccatacacctt-attttggttgctt 8183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 53597622 - 53597524
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgag 215  Q
    |||||||||||||| ||| |||||| ||||||| |||||||  |||||| | ||| |||||  | | || ||||||||||||||||||||||||||||||    
T  53597622 acaccaataaaata-ctttatgtgtggagcaaaataatcaagcaaccaatatcaacgtggga-agaattataaacacaagcaaaaatagaaaacaacgag 53597525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 27421022 - 27420935
Alignment:
Q  130 aacttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||||| ||||||| |||||||  |||||| | ||| |||||| ||| || ||||||||||||||| || ||||||| ||||    
T  27421022 aacttgatgtgttgagcaaattaatcaagcaaccaatatcaatgtgggtaacaattataaacacaagcaaaagtataaaacaatgaga 27420935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 53597539 - 53597645
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||| |||||||||||||||| || |   ||| ||||| |||||||||| ||||||  ||| ||||||||| |||| | |||||||||||| ||||||||    
T  53597539 tttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt--ttgctccacacataaagtattttattggtgtga-ttttcatc 53597632  T
Q  105 aaattcgcaacaa 117  Q
     ||||| ||||||    
T  53597633 gaattcacaacaa 53597645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 41849437 - 41849348
Alignment:
Q  130 aacttgatgtgtagagcaaag--taatcaattaaccaaaacaaagtgggtgacagttttaaacacaag-caaaaatagaaaacaacgaga 216  Q
    |||||||||||| |||||| |  |||||||  |||||||||||||||  ||| |||| |||| ||||| ||||| |||||||||||||||    
T  41849437 aacttgatgtgtggagcaagggataatcaagcaaccaaaacaaagtgtatgaaagttataaatacaagccaaaagtagaaaacaacgaga 41849348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 25635718 - 25635789
Alignment:
Q  44 ttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||| |||||| |||| |||||||||||||| | ||||| |||||| |||||||| ||||| ||||||    
T  25635718 ttggttgcttgattattacttgctccacacatcaagtat-ttattagtgtga-ttttcatcgaattcacaacaa 25635789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 7768941 - 7768857
Alignment:
Q  133 ttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    ||||||||| |||||||  ||||||  |||||| | ||| |||||| ||| || ||||||||||||||| | |||||||||||||    
T  7768941 ttgatgtgtggagcaaaaaaatcaagcaaccaatatcaatgtgggtaacaattataaacacaagcaaaagtggaaaacaacgaga 7768857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 29897577 - 29897545
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||    
T  29897577 tccacacatcaagtttgttattggtgtggtttt 29897545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 29913854 - 29913822
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||    
T  29913854 tccacacatcaagtttgttattggtgtggtttt 29913822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 8e-41; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50078750 - 50078634
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||     
T  50078750 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttc 50078652  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||||||||||    
T  50078651 tcatcgaattcgcaacaa 50078634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2949193 - 2949079
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  2949193 ctacttttggcttgtgtttataattgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 2949095  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  2949094 catcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 39462845 - 39462956
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  39462845 ttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatc 39462944  T
Q  105 aaattcgcaaca 116  Q
     |||||||||||    
T  39462945 gaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27339090 - 27338990
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  27339090 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccacacatcaagtttgttattgatgtgattttt 27338991  T
Q  101 c 101  Q
    |    
T  27338990 c 27338990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50307504 - 50307388
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||| |||| ||||||||||| |||||||||||||||||    
T  50307504 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtttattattggtgtgattttt 50307405  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  50307404 catcgaattcccaacaa 50307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14097930 - 14097813
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||  |||| | |||||||||||||||||||||||||| |||||    
T  14097930 ctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggtgtgtttttt 14097831  T
Q  101 catcaaattcgcaacaac 118  Q
    | || |||||||||||||    
T  14097830 cttcgaattcgcaacaac 14097813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25251235 - 25251127
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||||||||||||    
T  25251235 ctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttt 25251137  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  25251136 catcgaattc 25251127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6995654 - 6995539
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||| |||||| | ||| ||||| ||||||||||||||||||||||||||||||||||    
T  6995654 ctacttttggcttgtgtttatagttgttccatacactttg-ttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttt 6995556  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  6995555 catcgaattcgcaacaa 6995539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 18839912 - 18840023
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||||||||||||||||||||||| ||||||||||| ||| | || ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18839912 ttttggcttgtgtttataattgttccatacactttg-tttcgattacttgattattccttgctccacacatcaagtttgttattggtgtgatttttcatc 18840010  T
Q  105 aaattcgcaacaa 117  Q
     ||||||||||||    
T  18840011 gaattcgcaacaa 18840023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27336899 - 27336799
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  27336899 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattgatgtgattttt 27336800  T
Q  101 c 101  Q
    |    
T  27336799 c 27336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28207027 - 28206911
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||  |||| |||||||||||||||||||||||||||| ||| |    
T  28207027 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttct 28206928  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  28206927 catcgaattcacaacaa 28206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31490232 - 31490346
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||||||||||| ||||||||||||||||    
T  31490232 ctacttttgacttgtgtttataattgtttcatacacttt-attttggttgcttgattatctcttgctccacacatcaagtttg-tattggtgtgattttt 31490329  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  31490330 catcgaattcgcaacaa 31490346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23816210 - 23816323
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||| ||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  23816210 ctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgattttt 23816307  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  23816308 catcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25248512 - 25248398
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||||| | ||||||||  ||||||||||||||||||||||| ||||||||||    
T  25248512 ctacttttgacttttgtttataattgtttcatacactttg-ttttggttgcttgactattccttactccacacatcaagtttgttattgttgtgattttt 25248414  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  25248413 catcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16226495 - 16226608
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  16226495 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 16226591  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  16226592 catcgaattcacaacaa 16226608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4131332 - 4131221
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttttcat 103  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  |||| ||| ||||||||||||||||||||||||| ||||||||    
T  4131332 ttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgctccgcacatcaagtttgttattggtgtgagtttttcat 4131234  T
Q  104 caaattcgcaaca 116  Q
    | |||||||||||    
T  4131233 cgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 31424976 - 31424861
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||  |||||| |||| || ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  31424976 ctacttttgacttgtgtttataattgtcccatacattttg-ttatggttgcttgagtattccttgctccacacatcaagtttgttattggtgtgattttt 31424878  T
Q  101 catcaaattcgcaacaa 117  Q
    |||  ||||||||||||    
T  31424877 cattgaattcgcaacaa 31424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3579544 - 3579431
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| | |||||  |||| |||||||||||||||||||||||||||| |||||    
T  3579544 ctacttttggcttgtgtttataattgttccatacacttt-attttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg-ttttt 3579447  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  3579446 catcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17324394 - 17324484
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtg 92  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  17324394 ctacttttggcttgtgtttataattttttcatacactttg-ttatggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47906591 - 47906704
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| ||||||||||| |||||||||||  ||||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||    
T  47906591 ctacttttggcttgtgattataattgttccatacactttg-gtttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttt 47906688  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  47906689 catcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30780366 - 30780482
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccaca--catcaagtttgttattggtgtgattt 98  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||  ||||||||||||||||||||||| ||    
T  30780366 ctacttttgatttgtgtttataattgtttcatacactttg-ttttggttgcttgattattccttactccacacacatcaagtttgttattggtgtgagtt 30780464  T
Q  99 ttcatcaaattcgcaaca 116  Q
    |||||| ||||| |||||    
T  30780465 ttcatcgaattcacaaca 30780482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9241048 - 9240940
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||  |||| ||||||| ||||||||||||||||||||||||||    
T  9241048 ctacttttggtttgtatttataattgtttcatacactttg-ttttggttgcttgattatcacttgctccacacttcaagtttgttattggtgtgattttt 9240950  T
Q  101 catcaaattc 110  Q
     ||| |||||    
T  9240949 tatcgaattc 9240940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 50248529 - 50248417
Alignment:
Q  3 acttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttca 102  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||| ||||  |||||||||||| ||||||||||||||||||| |||    
T  50248529 acttttggcttgtggttataattgttccatacactttg-ttttggttgcttgattatcccttactccacacatcaaatttgttattggtgtgatttatca 50248431  T
Q  103 tcaaattcgcaaca 116  Q
    || ||||| |||||    
T  50248430 tcgaattcacaaca 50248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16231890 - 16232002
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||| | ||| ||||||||||||| ||||||||||||||||||||    
T  16231890 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttgattatccgttgctccacacatcaag-ttgttattggtgtgattttt 16231986  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  16231987 catcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39932402 - 39932514
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  39932402 ctacttttggcttgtatttataact--tccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 39932498  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  39932499 catcgaattcacaaca 39932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41647240 - 41647356
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||  | |||||  |||| ||| |||||||||||||||||||||||| ||| |    
T  41647240 ctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtgttttct 41647339  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  41647340 catcgaattcacaacaa 41647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47451951 - 47452066
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| ||||| || ||||||||| |||||||||| ||||||||||    
T  47451951 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctcgacacatcaaatttgttattgatgtgattttt 47452049  T
Q  101 catcaaattcgcaacaa 117  Q
    |||  ||||| ||||||    
T  47452050 cattgaattcacaacaa 47452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 12302466 - 12302367
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||| | | |||||  |||| |||||||||||||||||||||||||||| |||||    
T  12302466 ctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgttattggtgtgtttttt 12302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15823869 - 15823968
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||||||| | ||||  ||||  ||||||||||||||||||||||||||||||||||    
T  15823869 ctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtgtgattttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17319207 - 17319321
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||| | || ||||||||||| ||||||||| || ||||||||||  |||||||||||| ||||||||||||| |||||||    
T  17319207 ctacttttggcttgtgtttataactattccatacactttg-ttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgattttt 17319305  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  17319306 catcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18307429 - 18307543
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||   ||| ||||||||||||||||||||||| |||  ||| |    
T  18307429 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcctaattatcatttgctccacacatcaagtttgttattgatgtattttct 18307527  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  18307528 catcgaattcgcaaca 18307543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11457436 - 11457327
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||| ||||||| |||| |||||| |||||||||| | |||||  |||| | ||||||||||||||||||||||||||||||||    
T  11457436 ctacttttggcttgtgtttaaaattgttccatatactttg-ttttggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtgattttt 11457338  T
Q  101 catcaaattcg 111  Q
    |||| ||||||    
T  11457337 catcgaattcg 11457327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10399782 - 10399669
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||||| |||||  |||| ||||||||||||| |||||||||||||||| |||    
T  10399782 ctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatattt 10399686  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  10399685 tcatcgaattcgcaaca 10399669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38925444 - 38925327
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttga-ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||| | |||||  |||  |||||||||||||||| ||||||||||| |||     
T  38925444 ctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaagtttattattggtgtgttttc 38925345  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||||||||| ||||||    
T  38925344 tcatcaaattcacaacaa 38925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47177689 - 47177802
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  47177689 ctacttttggcttgtattta--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 47177785  T
Q  101 catcaaattcgcaacaa 117  Q
     ||| ||||| ||||||    
T  47177786 gatcgaattcacaacaa 47177802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9459388 - 9459277
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  9459388 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 9459293  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  9459292 catcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9463215 - 9463104
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  9463215 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 9463120  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  9463119 catcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31422821 - 31422706
Alignment:
Q  1 ctacttttggcttgtgttt-ataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||| ||||||||| |||||| || | |||||||| ||||| |||| || ||||||||||| ||||||||||||||||||||||| |||||||||    
T  31422821 ctacttttgacttgtgttttataattattccgtacacttt-attttagttgattgattattccttgctccacacatcaagtttgttattgatgtgatttt 31422723  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  31422722 tcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13215404 - 13215518
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| || | ||| ||||| |||||||||||||||| ||||||||||| ||| |    
T  13215404 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgactatcccttgctccacacatcaagtttattattggtgtgttttct 13215502  T
Q  101 catcaaattcgcaaca 116  Q
    || | ||||| |||||    
T  13215503 caacgaattcacaaca 13215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28998211 - 28998093
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgat--tttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattt 98  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||| | |||||  |||| |||||||||||||||||| ||||||||| |||    
T  28998211 ctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgtttt 28998112  T
Q  99 ttcatcaaattcgcaacaa 117  Q
     || || ||||| ||||||    
T  28998111 ctcttcgaattcacaacaa 28998093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 29003927 - 29003809
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgat--tttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattt 98  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||| | |||||  |||| |||||||||||||||||| ||||||||| |||    
T  29003927 ctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtgtttt 29003828  T
Q  99 ttcatcaaattcgcaacaa 117  Q
     || || ||||| ||||||    
T  29003827 ctcttcgaattcacaacaa 29003809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2617844 - 2617956
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||||| ||||| ||||| | ||||||||||| ||||||||||||||  ||||    
T  2617844 ctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaag-ttgttattggtgtg-gtttt 2617939  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  2617940 catcgaattcgcaacaa 2617956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13358900 - 13359012
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| | ||| ||||  ||||||||||||| ||||||||||||||| ||||    
T  13358900 ctacttttggcttgtatttataact--ttcatacactttgattttggttgcttgactatcccttactccacacatcaag-ttgttattggtgtga-tttt 13358995  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  13358996 catcgaattcgcaacaa 13359012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51750366 - 51750477
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  51750366 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 51750461  T
Q  101 catcaaattcgcaacaa 117  Q
     ||| ||||||||||||    
T  51750462 -atcgaattcgcaacaa 51750477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 23786171 - 23786278
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  23786171 ttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 23786266  T
Q  105 aaattcgcaaca 116  Q
     ||||| |||||    
T  23786267 gaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47180040 - 47180152
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||| ||||||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  47180040 ctacttttggcttgtattta--attattccatacgctttgattttgattgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 47180136  T
Q  101 catcaaattcgcaaca 116  Q
     ||| ||||| |||||    
T  47180137 gatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 16429277 - 16429388
Alignment:
Q  3 acttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttca 102  Q
    |||||||| |||||||||||| |  | ||||||||||| |||||||||| | |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  16429277 acttttggtttgtgtttataact--tccatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttca 16429373  T
Q  103 tcaaattcgcaacaa 117  Q
    || ||||| ||||||    
T  16429374 tcgaattcacaacaa 16429388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 156089 - 155998
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaaca 210  Q
    |||||||||||||| |||||||||| ||| ||||||||||| |||| ||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  156089 acaccaataaaata-cttgatgtgtggagaaaagtaatcaagtaactaaaacaa-gtgggtgacagttataaacacaagccaaaatagaaaaca 155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13762163 - 13762275
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||  ||||||||||||| |||||||||||||||||||     
T  13762163 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatccctttctccacacatcaag-ttgttattggtgtgattttc 13762258  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  13762259 tcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20291783 - 20291895
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||| |||||||||||| ||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  20291783 ctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 20291878  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  20291879 catcgaattcgcaacaa 20291895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 46431659 - 46431547
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||| |||||  |||| |||| |||||||||| ||||||||||||||||||    
T  46431659 ctacttttggcttgtattta--attgttccatacgctttg-ttttggttgcttgattatctcttgctccaaacatcaagtt-gttattggtgtgattttt 46431564  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  46431563 catcgaattcgcaacaa 46431547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51757862 - 51757974
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| || |  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  51757862 ctacttttggcttgtattca--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcattttt 51757957  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  51757958 catcgaattcacaacaa 51757974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13447227 - 13447117
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  13447227 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 13447133  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  13447132 catcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28842821 - 28842943
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||  ||||||||||||| |||||||| |||||| ||||    
T  28842821 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgttattagtgtga-tttt 28842915  T
Q  101 catcaaattcgcaacaacaccaataaaa 128  Q
    |||| |||||||||||||| ||| ||||    
T  28842916 catcgaattcgcaacaacagcaacaaaa 28842943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25860363 - 25860270
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    | ||| ||||| ||||||||||||||||| |||||||||| ||||    
T  25860363 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttg----actatcccttgctccacacatcaagtttgatattggtgtggtttt 25860270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 8348988 - 8348904
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||  ||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||    
T  8348988 catacactttg--tttggttgcttgattattacttgttccacacgtcaagttt-ttattggtgtgatttttcatcgaattcacaacaa 8348904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 13125333 - 13125431
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaag-taatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgag 215  Q
    ||||||||||| || |||||||||| |||||||  |||||||  ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  13125333 acaccaataaatta-cttgatgtgtggagcaaaaataatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagcaaaagtagaaaacaacgag 13125430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15294788 - 15294678
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  15294788 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 15294694  T
Q  101 catcaaattcgcaaca 116  Q
    |||| || ||||||||    
T  15294693 catcgaaatcgcaaca 15294678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15916710 - 15916821
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||   || ||||||||||| |||||||||||| ||| || |||| |||||||||||||| | |||||||||||| ||||    
T  15916710 ctacttttggcttgtgtttataa--cttccatacactttg-ttttggttgcttgattgttacttgctccacacatcaagtat-ttattggtgtgactttt 15916805  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  15916806 catcgaattcacaaca 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20302768 - 20302879
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||| |||||||||||| ||| |||||  |||| |||| |||||||| ||||||||||||||| ||||    
T  20302768 ctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccagacatcaag-ttgttattggtgtga-tttt 20302863  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  20302864 catcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 31735472 - 31735365
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||| ||||||||||| |||| |||||    
T  31735472 ttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtaatttctcatc 31735377  T
Q  105 aaattcgcaaca 116  Q
     |||||||||||    
T  31735376 gaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 17186064 - 17185978
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||||||||| |||||||||||| | |||  |||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  17186064 catacactttg-ttttggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatttttcatcaaattcacaacaa 17185978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 24326008 - 24326101
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||| |||||||||| | ||||||||||| ||||| ||||  ||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  24326008 taattgttccatacacttt-actttggttgcttgattatcccttactccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 25128225 - 25128294
Alignment:
Q  34 cactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcat 103  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||  |||| |||||||    
T  25128225 cactttgattttggttgcttgattattccttgctctacacatcaagtttgttattgacgtgagttttcat 25128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 16432709 - 16432809
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| || ||||||||| |  |||||||||| || ||||| |||| | |||||| |||| |||||||||||| |||||||||||||||||||||    
T  16432709 ctacttttggtttatgtttataact--ttcatacactgtg-ttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgattttt 16432805  T
Q  101 catc 104  Q
    ||||    
T  16432806 catc 16432809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40134264 - 40134378
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattat-tc-cttgttccacacatcaagtttgttattggtgtgattt 98  Q
    |||||||||||||| | |||||| |  | ||||||||||| |||||||||| | ||||| || |||| ||||||||||||||||||||||| ||||||||    
T  40134264 ctacttttggcttgagattataact--tccatacactttg-ttttggttgcctgattatatcacttgctccacacatcaagtttgttattgatgtgattt 40134360  T
Q  99 ttcatcaaattcgcaaca 116  Q
    |||||| ||||| |||||    
T  40134361 ttcatcgaattcacaaca 40134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 28279673 - 28279577
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacga 214  Q
    |||||||||||||| |||||||||| ||||||  ||| |||  ||||||| ||| |||||||||| || ||||||||||| ||| |||||||||||||    
T  28279673 acaccaataaaata-cttgatgtgtggagcaagttaaacaaacaaccaaatcaacgtgggtgacaattataaacacaagcgaaagtagaaaacaacga 28279577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51752696 - 51752806
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| || |  |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||| ||| || |||||||||||| ||||    
T  51752696 ctacttttggcttgtattca--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacat-aag-ttattattggtgtga-tttt 51752789  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  51752790 catcgaattcacaacaa 51752806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 14183557 - 14183454
Alignment:
Q  10 gcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaatt 109  Q
    |||||||||||||| |  | ||||||||||| |||||||||||| |||||| |||| | |||||||||||| | ||||||||||||||||| ||| ||||    
T  14183557 gcttgtgtttataact--tccatacactttg-ttttggttgcttgattattacttgcttcacacatcaagtattttattggtgtgattttt-atcgaatt 14183462  T
Q  110 cgcaacaa 117  Q
    | ||||||    
T  14183461 cacaacaa 14183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 26332391 - 26332482
Alignment:
Q  121 caataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacg 213  Q
    |||||||||| |||||||||| ||||||| |||||||  || ||||||||  ||||||| |||| ||||||||| ||||| ||||||||||||    
T  26332391 caataaaata-cttgatgtgtggagcaaaataatcaagcaatcaaaacaacatgggtgatagttataaacacaaacaaaagtagaaaacaacg 26332482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 10116177 - 10116096
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    |||||||||||||| |||||||||| ||||||| ||||||| |||||||||||| ||| | ||||||| |||||| ||||||||    
T  10116177 acaccaataaaata-cttgatgtgtggagcaaattaatcaaataaccaaaacaacgtgtg-gacagttataaacataagcaaaa 10116096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 13127576 - 13127662
Alignment:
Q  131 acttgatgtgtagagcaaag-taatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgagat 217  Q
    ||||||||||| |||||||  |||||||  ||||||||||| ||||||||||||| |||||||||||||||  ||||||||| |||||    
T  13127576 acttgatgtgtggagcaaaaataatcaagcaaccaaaacaa-gtgggtgacagttataaacacaagcaaaaggagaaaacaatgagat 13127662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 13433560 - 13433478
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    |||||||||||||| ||| || ||| ||||||| |||||||  ||||||||||| ||||||||||||| |||| ||||||||||    
T  13433560 acaccaataaaata-cttaatctgtggagcaaattaatcaagcaaccaaaacaacgtgggtgacagttataaatacaagcaaaa 13433478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28841006 - 28841083
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtt 81  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||| |||||||||    
T  28841006 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccactcatcaagtt 28841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50076634 - 50076563
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacac 73  Q
    ||||||||  |||||||||||||||||| ||||||||||| |||| ||||||| ||||||| ||| |||||||    
T  50076634 ctacttttaacttgtgtttataattgttccatacactttg-ttttagttgctttattattcattgctccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 17324586 - 17324484
Alignment:
Q  8 tggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttttcatcaa 106  Q
    |||||| || |||||||||||  || ||||||| || ||| ||||| | ||| ||||  ||||||||||||||||||||||||||||| ||||||||| |    
T  17324586 tggcttatgattataattgttctattcactttg-ttatggctgcttgactatcccttactccacacatcaagtttgttattggtgtgagtttttcatcga 17324488  T
Q  107 attc 110  Q
    ||||    
T  17324487 attc 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 18800534 - 18800439
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||   || ||||||||||| ||||| |||||| ||||||  ||| || ||||||||||| | || |||||||||||||    
T  18800534 ctacttttggcttgtgtttataa--cttccatacactttg-ttttgattgcttgattattatttgctctacacatcaagtattttgttggtgtgatttt 18800439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 14183477 - 14183577
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacga 214  Q
    |||||||||||||| ||||||||||  |||||  | |||||||  |||||||||||||||  ||  |||| |||||||||||||||  ||||||||||||    
T  14183477 acaccaataaaata-cttgatgtgtgaagcaagtaataatcaagcaaccaaaacaaagtgtatggaagttataaacacaagcaaaagaagaaaacaacga 14183575  T
Q  215 ga 216  Q
    ||    
T  14183576 ga 14183577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 27916849 - 27916803
Alignment:
Q  170 aagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    ||||||||||||||| |||||||||| |||| |||||||||||||||    
T  27916849 aagtgggtgacagttataaacacaagtaaaagtagaaaacaacgaga 27916803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 30790334 - 30790250
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||||| |||||| |||| | ||||||||| || | |||||||||||| |||||||| ||||| |||||    
T  30790334 catacactttg-ttttggttgcttgattattacttgcttcacacatcaggtattttattggtgtga-ttttcatcgaattcacaaca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 2510284 - 2510202
Alignment:
Q  15 tgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||| |||||||| ||||||||||| |||| ||||||| |||||  |||| | |||| |||||||| |||||||||||||||||    
T  2510284 tgtttttaattgttccatacactttg-ttttcgttgcttgattatctcttgcttcacatatcaagtt-gttattggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 18800445 - 18800546
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaag-caaaaatagaaaacaacg 213  Q
    ||||||| |||||| |||||||||||||||||  | |||||||  || ||||||||||||  ||  |||| |||||||||| ||||| ||||||||||||    
T  18800445 acaccaacaaaata-cttgatgtgtagagcaaataataatcaagcaatcaaaacaaagtgtatggaagttataaacacaagccaaaagtagaaaacaacg 18800543  T
Q  214 aga 216  Q
    |||    
T  18800544 aga 18800546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 13125383 - 13125310
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||||| ||||||  ||| ||||||||||||||   ||||||||||||||||| | | |||||||||||    
T  13125383 ttttggttgcttgattattt-ttgctccacacatcaagtaatttattggtgtgatttttgaacgaattcgcaaca 13125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 13785153 - 13785106
Alignment:
Q  69 cacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  13785153 cacacatcaagttt-ttattggtgtgattttttaacaaattcacaacaa 13785106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 35928 - 36037
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  35928 ttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtaatttttcatc 36027  T
Q  105 aaattcgcaa 114  Q
     |||||||||    
T  36028 gaattcgcaa 36037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 8e-38; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15068358 - 15068473
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||    
T  15068358 ctacttttggcttgtgtttgtaattgttccatacactttg-ttttggttgcttgactatcccttgttccacacatcaagtttgttgttggtgtgattttt 15068456  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  15068457 catcgaattcgcaacaa 15068473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15073088 - 15073202
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||| |||||| | ||| ||||| ||||||||||||||||||||||||||||||||||    
T  15073088 ctacttttggcttgtgtttataattgttccatacactttg-ttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttt 15073186  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  15073187 catcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14808137 - 14808252
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||| ||||||||||||||||||||||||||||| ||||    
T  14808137 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgattttt 14808235  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||| |||||||    
T  14808236 tcatcgaatgcgcaaca 14808252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33541369 - 33541255
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||| ||||  ||||||||||||||||||||||||||||||||||    
T  33541369 ctacttttggcttgtgtttataattgttccatacacttt-attttgattgcttgattatcccttactccacacatcaagtttgttattggtgtgattttt 33541271  T
Q  101 catcaaattcgcaaca 116  Q
     ||| ||||| |||||    
T  33541270 gatcgaattcacaaca 33541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 14477630 - 14477742
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  | |||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  14477630 ttttggcttgtgtttatgattgtttcatacactttg-ttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 14477728  T
Q  105 aaattcgcaacaac 118  Q
     ||||| |||||||    
T  14477729 gaattcacaacaac 14477742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 18811090 - 18811203
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||    
T  18811090 ctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttt 18811186  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  18811187 catcgaattcgcaacaa 18811203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 24873148 - 24873039
Alignment:
Q  4 cttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcat 103  Q
    |||||||||||| ||||||| |  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  24873148 cttttggcttgtatttataact--ttcatacactttgtttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcat 24873052  T
Q  104 caaattcgcaaca 116  Q
    | ||||| |||||    
T  24873051 cgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28283173 - 28283061
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| |||||  || |||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  28283173 ctacttttggcttgtatttat--ttttttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 28283078  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  28283077 catcgaattcgcaacaa 28283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25952896 - 25953011
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||||||||||| |||||  |||  |||||||||||||||||||||||||||| ||| |    
T  25952896 ctacttttggattgtgtttataattgcttcatacacttt-attttggttgcttgattatcactttctccacacatcaagtttgttattggtgtgttttct 25952994  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  25952995 catcgaattcacaacaa 25953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35872415 - 35872300
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||||| ||||  | |||||||||||||||||||||||||| ||| |    
T  35872415 ctacttttggcttgtgtttataatttttccatacacttt-attttggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgttttct 35872317  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  35872316 catcgaattcacaacaa 35872300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41383040 - 41383155
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||| ||||||||||||||||||||| |||| |||||| ||||| |||||| |||||  |||| |||||||||||||||||||||||||||| |||||    
T  41383040 ctacttctggcttgtgtttataattgttccataaactttg-ttttgattgcttgattatctcttgctccacacatcaagtttgttattggtgtggttttt 41383138  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| || |||||||||    
T  41383139 catcgaactcgcaacaa 41383155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30480462 - 30480365
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||||  |||||||||||| |||||||||||||| |||||    
T  30480462 ctacttttggcttgtatttataattgttccatacactttg-ttttggttgcttgattattccttactccacacatcaaatttgttattggtgtcatttt 30480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37214223 - 37214107
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||||||  |||||||||| ||||||||||||  ||||  |||  |||| ||||||||||||||||||||||| ||| |    
T  37214223 ctacttttggcttgtgtttataattgttctatacactttg-ttttggttgcttgcttatctcttactccatacatcaagtttgttattggtgtgttttct 37214125  T
Q  101 catcaaattcgcaacaac 118  Q
    |||||||||| |||||||    
T  37214124 catcaaattcacaacaac 37214107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18813264 - 18813376
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||||| |||||  |||| || ||| |||||| ||||||||||||||||||||    
T  18813264 ctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctctacatatcaag-ttgttattggtgtgattttt 18813360  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  18813361 catcgaattcgcaaca 18813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28251524 - 28251410
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||| ||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  28251524 ctacttgtggcttgtgattataattgttccatacactttg-ttttggttgcctgattattccttgctccacacatcaag-ttgttattggtgtgattttt 28251427  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  28251426 tcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 43082356 - 43082467
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  43082356 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 43082451  T
Q  101 catcaaattcgcaaca 116  Q
     |||| |||| |||||    
T  43082452 gatcagattcacaaca 43082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36865915 - 36866012
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||||||||||| |||| ||||    
T  36865915 ctacttttggcttttgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttgttattgatgtggtttt 36866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 41385123 - 41385234
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||||||||||||||||||||||| ||||||||||  ||||||||| || ||||| ||||| |||||    ||||||||||||| ||||||||||||    
T  41385123 tacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatcccttgctccac----caagtttgttatttgtgtgatttttc 41385218  T
Q  102 atcaaattcgcaacaa 117  Q
    ||  ||||||||||||    
T  41385219 atggaattcgcaacaa 41385234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13858446 - 13858341
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||| |  | ||||||||||| |||||||||||| |||||  |||| |||||||||||||||| |||||||||||||||||    
T  13858446 ctacttttggcttgtgtttataact--tccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgattttt 13858350  T
Q  101 catcaaatt 109  Q
    |||| ||||    
T  13858349 catcgaatt 13858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27827368 - 27827480
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  27827368 ctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga-tttt 27827463  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  27827464 catcgaattcgcaacaa 27827480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32339692 - 32339804
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| |||||||||||||||||||||||| ||||| |||||  |||||||||||| ||||||||||||||| ||||    
T  32339692 ctacttttgacttgtattta--attgttccatacactttgattttggttgcttgattatcccttgccccacacatcaag-ttgttattggtgtga-tttt 32339787  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  32339788 catcgaattcgcaacaa 32339804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43530498 - 43530610
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||| ||||||||||||||||||    
T  43530498 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattttt 43530593  T
Q  101 catcaaattcgcaacaa 117  Q
    |||  ||||||||||||    
T  43530594 cattgaattcgcaacaa 43530610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3883547 - 3883436
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| | ||| ||||||||||||||| ||||||| ||||||||||    
T  3883547 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtt-gttattgatgtgattttt 3883452  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  3883451 catcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14419149 - 14419034
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||| | | |||||  |||| |||| ||||||||||||||||||||||| ||| |    
T  14419149 ctacttttgacttgtgtttataattgttccatacactttg-ttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgtgttttct 14419051  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  14419050 catcgaattcacaacaa 14419034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22684605 - 22684490
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||| ||||||||||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  22684605 ctacttttggcttgtattta--attgttccataaactttgattttggttgcctgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 22684509  T
Q  101 --catcaaattcgcaacaa 117  Q
      |||| ||||||||||||    
T  22684508 tccatcgaattcgcaacaa 22684490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27911455 - 27911568
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| || |||||||| |||| ||| || ||||||  |||| |||||||||||||||| |||||||||||||||||    
T  27911455 ctacttttggcttgtgtttataattgttcca-acactttg-ttttagtttct-aattatcacttgctccacacatcaagttttttattggtgtgattttt 27911551  T
Q  101 catcaaattcgcaacaa 117  Q
    || ||||||| ||||||    
T  27911552 caacaaattcacaacaa 27911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27957874 - 27957987
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| || |||||||| |||| ||| || ||||||  |||| |||||||||||||||| |||||||||||||||||    
T  27957874 ctacttttggcttgtgtttataattgttcca-acactttg-ttttagtttct-aattatcacttgctccacacatcaagttttttattggtgtgattttt 27957970  T
Q  101 catcaaattcgcaacaa 117  Q
    || ||||||| ||||||    
T  27957971 caacaaattcacaacaa 27957987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 15809619 - 15809711
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  15809619 taattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaaca 15809711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 27829697 - 27829790
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  27829697 taattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgcaaca 27829790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4424401 - 4424513
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| |||||||| |||| ||||||||||||||| ||||    
T  4424401 ctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacaccaag-ttgttattggtgtga-tttt 4424496  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  4424497 catcgaattcacaacaa 4424513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43079985 - 43080097
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||||| |  ||||||||||||| |||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||||    
T  43079985 ctacttttgacttgtatttataact--ttcatacactttg-ttttggttgcttaattatccattgctccacacatcaag-ttgttattggtgtgattttt 43080080  T
Q  101 catcaaattcgcaacaa 117  Q
     |||| |||| ||||||    
T  43080081 gatcagattcacaacaa 43080097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5372141 - 5372042
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||| |||||||| |||| |||||| ||| ||||| ||||||| | ||| | ||| ||||||||||||||||||||||| ||||||||||    
T  5372141 ctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgtgattttt 5372042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 15956355 - 15956444
Alignment:
Q  27 tttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||||| ||||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  15956355 tttcatacactttg-ttttggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacaa 15956444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3874376 - 3874488
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| ||||||||||||  ||||  |||| ||||||||||||||| ||||||||||||||||||    
T  3874376 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttggttatctcttgctccacacatcaagtt-gttattggtgtgattttt 3874471  T
Q  101 catcaaattcgcaacaa 117  Q
    || | ||||| ||||||    
T  3874472 caacgaattcacaacaa 3874488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31162588 - 31162683
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||| |||||||||| |||| |||||||||||||| | ||||||||||||||||    
T  31162588 ctacttttggcttgtatttataact--tccatacactttg-ttttggttacttaattattacttgctccacacatcaagtattttattggtgtgatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 21482724 - 21482798
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||||| |||||  |||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  21482724 ttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 27106832 - 27106747
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||||| | ||| ||||| |||||||||||||||||||||||||||| ||| ||||| |||| ||||||    
T  27106832 catacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaatttgcaaca 27106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 13985703 - 13985772
Alignment:
Q  131 acttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    ||||||||| | ||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  13985703 acttgatgtttggagcaaattaatcaagtaaccaaaacaacgtgggtgacagttataaacacaagcaaaa 13985772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 1225571 - 1225626
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatt 97  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  1225571 ttttggttgcttgattattccttgttccacacatcaagtatgttattggcgtgatt 1225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 15185649 - 15185564
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||||| | ||| ||||  ||||||||||||||||||||||| |||||||||||| | ||||| |||||    
T  15185649 catacactttg-ttttggttgcttgactatcccttactccacacatcaagtttgttattgatgtgatttttcaccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 181853 - 181901
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttg 50  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  181853 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 609118 - 609230
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttg-attttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||| ||||  ||||||||||||||||||  |||||||||||| |||||  |||| ||||| ||||||| |||||||||||| || |||    
T  609118 ctacttttggcttgtattta--attgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatcaag-ttgttattggtgcga-ttt 609213  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  609214 tcatcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44721226 - 44721337
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  ||| || ||||||||||| |||||||||||| ||||| ||||  ||||||||||||| ||||||||||||||||| ||    
T  44721226 ctacttttgacttgtattta--attattccatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgttattggtgtgattatt 44721321  T
Q  101 catcaaattcgcaaca 116  Q
     |||| |||| |||||    
T  44721322 gatcagattcacaaca 44721337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 2468061 - 2467978
Alignment:
Q  32 tacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||||||| |||||||||||| | |||  |||| |||||||||||||||| |||||||||||| |||||||| ||||| ||||||    
T  2468061 tacactttg-ttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtga-ttttcatcgaattcacaacaa 2467978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 183255 - 183310
Alignment:
Q  61 ccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||| ||||| |||||    
T  183255 ccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 3005569 - 3005486
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||||  |||||||| || |||||| |||| |||||||||||||| | |||||||||||| |||||||| ||||| |||||    
T  3005569 catacactttg--tttggttgtttgattattacttgctccacacatcaagtattttattggtgtga-ttttcatcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 21480941 - 21480991
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||||||| |||||||||| |||||||||| ||||| ||||||    
T  21480941 tccacacatcaagtttattattggtgttatttttcatcgaattcacaacaa 21480991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 17847901 - 17847986
Alignment:
Q  10 gcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||  | ||||  ||| ||||||||||||||||| |  || ||||||||||||||| | |||||||||||||||||    
T  17847901 gcttgtgtttataattgtcacctaca--ttg-ttttggttgcttaattaat--tttttccacacatcaagtattttattggtgtgattttt 17847986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 17847979 - 17847889
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaa 208  Q
    |||||||||||||| |||||||||| ||  ||| |||| ||  ||||||||||| || ||||||| || ||||||||||||| | |||||||    
T  17847979 acaccaataaaata-cttgatgtgtggaaaaaattaattaagcaaccaaaacaatgtaggtgacaattataaacacaagcaagagtagaaaa 17847889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 31162677 - 31162576
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaa-tagaaaacaacg 213  Q
    |||||||||||||| |||||||||| ||||||  | |||| || ||||||||||||||||  ||  |||| |||| |||||| |||| ||||||||||||    
T  31162677 acaccaataaaata-cttgatgtgtggagcaagtaataattaagtaaccaaaacaaagtgtatggaagttataaatacaagccaaaagtagaaaacaacg 31162579  T
Q  214 aga 216  Q
    |||    
T  31162578 aga 31162576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 16833954 - 16834025
Alignment:
Q  44 ttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||| ||||||  ||||| |||||||||||| | |||||||||||| |||||| | ||||| ||||||    
T  16833954 ttggttgcttgattatt--ttgtttcacacatcaagtattttattggtgtgacttttcaacgaattcacaacaa 16834025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 2467928 - 2467896
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||| ||||||||||||||||    
T  2467928 tccacacatcaagtttattattggtgtgatttt 2467896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 31578155 - 31578254
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgag 215  Q
    |||| ||||||||| ||||||||||  |||||| |||||||  |||||| | |||  ||||  ||| || ||||||||||||||| ||||||||||||||    
T  31578155 acacgaataaaata-cttgatgtgtgtagcaaaataatcaagcaaccaatatcaatatgggcaacaattataaacacaagcaaaagtagaaaacaacgag 31578253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 8e-38; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19007936 - 19008051
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19007936 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtgattttt 19008034  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  19008035 tcatcgaattcacaaca 19008051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21520649 - 21520533
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| | |||||  |||| |||||||||||||||||||||||||||| ||| |    
T  21520649 ctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttct 21520550  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  21520549 catcgaattcgcaacaa 21520533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28196931 - 28197046
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||| ||||| |||||||||||| |||||||||||||||||||||    
T  28196931 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtgattttt 28197029  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| || || ||||||    
T  28197030 catcgaactcacaacaa 28197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38020376 - 38020484
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||     
T  38020376 ctacttttagcttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtgatttta 38020474  T
Q  101 catcaaattc 110  Q
    ||||||||||    
T  38020475 catcaaattc 38020484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 42923466 - 42923373
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg 94  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||  |||| ||||||||||||||||||||||||||||    
T  42923466 ctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgttattggtgtg 42923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17849413 - 17849528
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  17849413 ctacttttggcttgtgtttaaaattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttt 17849511  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  17849512 tcatcgaattcacaaca 17849528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43623538 - 43623423
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| || ||||||||||| |||||||||| ||||||||||| | |||||   ||| ||||||||||||||| ||||||||||||||||||    
T  43623538 ctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatcaagttagttattggtgtgattttt 43623439  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  43623438 catcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 27105100 - 27105209
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||  ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  27105100 ctacttttggcttgcattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 27105196  T
Q  101 catcaaattcgca 113  Q
    |||| ||||||||    
T  27105197 catcgaattcgca 27105209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34979548 - 34979447
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||| |||||||||||||| |||||||||| ||||||||||||| ||||||||||  |||||||||||||||||||||||||||| ||| |    
T  34979548 ctacttttgacttatgtttataattgttccatacacttt-attttggttgctttattattccttactccacacatcaagtttgttattggtgtgttttct 34979450  T
Q  101 cat 103  Q
    |||    
T  34979449 cat 34979447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 3022471 - 3022583
Alignment:
Q  4 cttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcat 103  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  |||| |||||||||||||||||||||| ||||||| | |||     
T  3022471 cttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttgttatttgtgtgatctctcac 3022569  T
Q  104 caaattcgcaacaa 117  Q
    | ||||| ||||||    
T  3022570 cgaattcacaacaa 3022583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22707710 - 22707594
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    |||||| || |||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||  |||||||||||| ||||||||||||||| ||||     
T  22707710 ctacttctgccttgtgtttataattgttccatacactttg-ttttggttgcttgattgttccttactccacacatcaaatttgttattggtgtggttttc 22707612  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||||||||||    
T  22707611 tcatcgaattcgcaacaa 22707594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7462904 - 7462789
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| | ||| ||||||||||||||||||||| | |||| ||||     
T  7462904 ctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtttgttatcgatgtggttttc 7462806  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||| | |||||||||||    
T  7462805 tcaacgaattcgcaaca 7462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 14837565 - 14837679
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagt-ttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||  |||||||||| |||||||||||| |||||  |||| |||||||||||||| ||||||||| |||||||| |    
T  14837565 tacttttggcttgtgtttataattgttctatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtattgttattgatgtgatttct 14837663  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  14837664 catcgaattcacaaca 14837679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28459151 - 28459038
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||  |||| |||||||||||||| | |||||||||||| ||||    
T  28459151 ctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtgttttattggtgtga-tttt 28459054  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  28459053 catcgaattcacaaca 28459038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19501954 - 19501841
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  19501954 ctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 19501859  T
Q  101 catcaaattcgcaacaac 118  Q
    |||| |||||||||||||    
T  19501858 catcgaattcgcaacaac 19501841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 11739532 - 11739420
Alignment:
Q  4 cttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcat 103  Q
    |||||| ||||| |||||||||||||||||||||||| ||||  || ||| | ||| ||||| || ||||||||||||||||||||||||||||||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttattt-cttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcat 11739434  T
Q  104 caaattcgcaacaa 117  Q
    | ||||| ||||||    
T  11739433 cgaattcacaacaa 11739420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 45238958 - 45238841
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttc-atacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||| |||||| ||||   || ||||| |||||||||||||| | |||  |||| |||||||||||||||| ||||||||||||||||    
T  45238958 ctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgcttggtccacacatcaagtttattattggtgtgatttt 45238859  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||||||||||    
T  45238858 tcatcgaattcgcaacaa 45238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 45332127 - 45332019
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  |||||| || || ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  45332127 ttttggcttgtattta--attgttacaaacgctttg-ttttggttgcttaattatcccttgttccacacatcaag-ttgttattggtgtgatttttcatc 45332032  T
Q  105 aaattcgcaacaa 117  Q
     ||||| ||||||    
T  45332031 gaattcacaacaa 45332019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22287295 - 22287180
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||| |||| ||||| |||||||||||| |||||||| || |||||||||||| | ||| ||||| |||||||||||||||||||||||||||| ||| |    
T  22287295 ctacgtttgacttgtttttataattgttccatacactatg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttct 22287197  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  22287196 catcgaattcacaacaa 22287180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 36561074 - 36560980
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||| ||||| ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  36561074 taattgttccatacgctttg-ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaa 36560980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 17897125 - 17897219
Alignment:
Q  121 caataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||| |||||||||| ||||||| |||||||  |||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||    
T  17897125 caataaaata-cttgatgtgtggagcaaaataatcaagcaaccaaaacaaagttgatgacagttataaacacaagcaaaagtagaaaacaacgaga 17897219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22162983 - 22162869
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||| |||| |||||| |||| |||||||||||| ||||| ||||| | ||||||||||  |||||||||||||| ||| |    
T  22162983 ctacttttggcttgtgcttataactgttccatacaatttg-ttttggttgcttgattatcccttgcttcacacatcaaaattgttattggtgtgttttct 22162885  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  22162884 catcgaattcgcaaca 22162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23452189 - 23452094
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||| |||||| ||||  |||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  23452189 ctacttttagcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 23452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45279953 - 45279844
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||| |||||||||||||||| |    
T  45279953 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttct 45279858  T
Q  101 catcaaattcgcaa 114  Q
    |||| |||||||||    
T  45279857 catcgaattcgcaa 45279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6258776 - 6258668
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| ||||||||||||||||||| || |||||||| |||||||||| | |||||  |||| ||||||||||||||||||||||||| || ||| |    
T  6258776 ctacttttagcttgtgtttataattgttccagacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtatgttttct 6258678  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  6258677 catcgaattc 6258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19504289 - 19504177
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  19504289 ctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 19504194  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  19504193 catcgaattcacaacaa 19504177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 23871112 - 23871205
Alignment:
Q  1 ctacttttggcttgtgtttataattgttt--catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgt 93  Q
    ||||||||| |||||||||||||||||||  ||||||||||| ||||||||  |||||| ||||||| |||||||||||| ||||||||||||||    
T  23871112 ctacttttgccttgtgtttataattgtttttcatacactttg-ttttggttatttaattgttccttgctccacacatcaaatttgttattggtgt 23871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15539488 - 15539396
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga 95  Q
    |||||||| |||||||||||||||||||  |||||||||| ||||| |||||| || || ||||| |||||||||||||||||||||||||||||    
T  15539488 ctactttttgcttgtgtttataattgttcaatacactttg-ttttgattgcttgataat-ccttgctccacacatcaagtttgttattggtgtga 15539396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 6264107 - 6263992
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||| |||||||||| ||||||||| ||||||||||| |||||||||| | ||  |  |||| |||||||||||||||||||||| ||||| ||| |    
T  6264107 ctactttcggcttgtgttaataattgttccatacactttg-ttttggttgcctgatagtcacttgctccacacatcaagtttgttattagtgtgttttct 6264009  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  6264008 catcgaattcacaacaa 6263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35215544 - 35215433
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  ||| |||||||  ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  35215544 ctacttttgacttgtattta--attatttcatatgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 35215449  T
Q  101 catcaaattcgcaaca 116  Q
     |||| |||| |||||    
T  35215448 gatcagattcacaaca 35215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 36558814 - 36558721
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||| ||||| ||||| |||||||||||| ||||| ||||| ||||||||||||| || ||||||||||||||||||||| ||||| |||||    
T  36558814 taattgttccatacgctttg-ttttggttgcttgattatcccttgctccacacatcaag-ttattattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 5375303 - 5375218
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttatt 88  Q
    |||||||| ||||| |||||||||||| ||||||||||| ||||| |||||| ||||| ||||  ||||||||||||||||||||||    
T  5375303 tacttttgacttgtatttataattgttccatacactttg-ttttgattgcttgattatcccttactccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35217921 - 35217809
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  ||| || ||||| ||||| ||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||    
T  35217921 ctacttttgacttgtattta--attattccatacgctttg-ttttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgattttt 35217826  T
Q  101 catcaaattcgcaacaa 117  Q
     |||| |||| ||||||    
T  35217825 gatcagattcacaacaa 35217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13909997 - 13909902
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||  ||||||||||||| ||||||||||||||| ||||    
T  13909997 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttactccacacatcaag-ttgttattggtgtgactttt 13909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17848734 - 17848814
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtt 81  Q
    |||||||| | ||| ||||||||||||||||||||||  |||||||||||||| |||||  |||| |||||||||||||||    
T  17848734 ctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatcacttgctccacacatcaagtt 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 22874434 - 22874519
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||| ||||||| | |||  |||| |||||||||||||||| ||||||||||||||||||||| ||||| |||||    
T  22874434 catacactttg-ttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 13828199 - 13828295
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacg 213  Q
    ||||||||||||||  ||||||||| ||||||| |||||||  |||||| | ||| ||||||||||||| ||||||||| ||||| ||||||||||||    
T  13828199 acaccaataaaatat-ttgatgtgtggagcaaaataatcaagcaaccaatatcaacgtgggtgacagttataaacacaaacaaaagtagaaaacaacg 13828295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 24162175 - 24162075
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-ttt 99  Q
    ||||||||||||||| ||||  |||||||||||||||||  |||||||||||| |||||  |||  ||||||||||||| |||||||||||||||| |||    
T  24162175 ctacttttggcttgtattta--attgtttcatacactttt-ttttggttgcttgattatctctttctccacacatcaag-ttgttattggtgtgatattt 24162080  T
Q  100 tcatc 104  Q
    |||||    
T  24162079 tcatc 24162075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22407413 - 22407362
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgctt 53  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  22407413 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgctt 22407362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38414141 - 38414027
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||  ||||||||||||||| || ||||||||||| |||| ||||| |||||||  | || |||||||| ||| |||||| ||||||||||||||    
T  38414141 ctacttttaccttgtgtttataattattccatacactttg-ttttcgttgcctaattatcacgtgctccacacaccaattttgtt-ttggtgtgattttt 38414044  T
Q  101 catcaaattcgcaacaa 117  Q
    |||  ||||| ||||||    
T  38414043 catggaattcacaacaa 38414027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 42453798 - 42453891
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||| |||||| ||| ||||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| |||||||| ||||| ||||||    
T  42453798 taattgttccatacatttt-attttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcacaacaa 42453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11578068 - 11577957
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||| | ||    |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||  ||||| ||||    
T  11578068 ctacttttggcttgtgtttaaacttc---catatacttt-attttggttgcttgattattacttgttccacacatcaagttt-ttattaatgtgattttt 11577974  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  11577973 tcatcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 15697425 - 15697342
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaa-gtgggtgacagttttaaacacaagcaaaa 200  Q
    |||||||||||||| |||||||||||||||||  |||||||  ||||||||  || ||||||||||||| | |||||||||||||    
T  15697425 acaccaataaaata-cttgatgtgtagagcaatttaatcaagcaaccaaaaataatgtgggtgacagttatgaacacaagcaaaa 15697342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 20592398 - 20592484
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||||| |||||| |||| || |||||||| || | |||||||||||| ||||||||| ||||| |||||    
T  20592398 catacactttg-ttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgattttttcatcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 37962865 - 37962790
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| || |||||||||  |||  |||||||||||||||| |||||| |||||||||||||| ||||| ||||||    
T  37962865 ttttgattacttaattatcacttactccacacatcaagtttattattgatgtgatttttcatcgaattcacaacaa 37962790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 44289026 - 44288987
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttg 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44289026 ctactgttggcttgtgtttataattgtttcatacactttg 44288987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 20592460 - 20592368
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaa 208  Q
    |||||||||||||| | |||||||||||||||  | |||||||  |||||||||||||||  ||  |||| ||| ||||||||||| |||||||    
T  20592460 acaccaataaaata-cgtgatgtgtagagcaagtaataatcaagcaaccaaaacaaagtgtatggaagttataatcacaagcaaaagtagaaaa 20592368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42064801 - 42064878
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtt 81  Q
    |||||||| |||||| ||||  |||||| ||||||||||| |||| ||||||| || || ||||| |||||||||||||||    
T  42064801 ctactttttgcttgtattta--attgttccatacactttg-ttttagttgcttgatcatcccttgctccacacatcaagtt 42064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 20146506 - 20146458
Alignment:
Q  69 cacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||| | ||||||||||||||||||| | ||||| ||||||    
T  20146506 cacacatcaagtattttattggtgtgatttttcaacgaattcacaacaa 20146458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 41304381 - 41304464
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaa 201  Q
    |||||||||||||| ||||| ||||||| |||| |||||||  ||| |||||||  | || ||||||| | ||||||||||||||    
T  41304381 acaccaataaaata-cttgacgtgtagaacaaattaatcaagcaactaaaacaacctaggagacagttatgaacacaagcaaaaa 41304464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 42923347 - 42923315
Alignment:
Q  62 cttgttccacacatcaagtttgttattggtgtg 94  Q
    |||| ||||||||||||||||||||||||||||    
T  42923347 cttgctccacacatcaagtttgttattggtgtg 42923315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 80190 - 80306
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||| | |||||| |||| |||||||||||||||||||||||||||| ||| |    
T  80190 ctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctccacacatcaagtttgttattggtgtgttttct 80289  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  80290 catcgaattcgcaacaa 80306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4295895 - 4295780
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||| ||||||  |||||||||| |||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||    
T  4295895 ctacttttggcttgtgtttattattgttctatacactttg-ttttggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgattttt 4295797  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| |||| |||||||    
T  4295796 catcgaatttgcaacaa 4295780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21678392 - 21678507
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  21678392 ctacttttggcttgtgtttataattgttccttacactttg-ttttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgattttt 21678490  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  21678491 catcgaattcacaacaa 21678507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31435007 - 31434892
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt- 99  Q
    |||||||||||||||||||||||||||| | |||||||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||     
T  31435007 ctacttttggcttgtgtttataattgttccttacacttt-attttgattgcttgattattccttgctccacacatcaagtttgttattggtgtgattttc 31434909  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| |||||||||||    
T  31434908 tcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 37412077 - 37411964
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga--tttttca 102  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| |||    
T  37412077 ttttggcttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgttccacacatcaagtttgttattggtgtgagttttctca 37411979  T
Q  103 tcaaattcgcaacaa 117  Q
    |||||||| ||||||    
T  37411978 tcaaattcacaacaa 37411964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9681150 - 9681252
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||| ||| |    
T  9681150 ctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtgttttct 9681249  T
Q  101 cat 103  Q
    |||    
T  9681250 cat 9681252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11355589 - 11355706
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||||| |||||||||||| ||| |||||||||||| ||||    
T  11355589 ctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtgtgattttt 11355688  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||| ||||||    
T  11355689 tcatcgaattcccaacaa 11355706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13099431 - 13099316
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| || |  || ||||| ||||||||||||||||||||||||||||||||||    
T  13099431 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgacgatcccttgctccacacatcaagtttgttattggtgtgattttt 13099333  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  13099332 catcgaattcacaacaa 13099316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26804841 - 26804956
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||||| | ||| | ||| |||||||||||| ||||||||||||||||||| |    
T  26804841 ctacttttgacttgtgtttataattgttccatacactttg-ttttggttgcttgactatcctttgctccacacatcaaatttgttattggtgtgatttct 26804939  T
Q  101 catcaaattcgcaacaa 117  Q
    |||||||||||||||||    
T  26804940 catcaaattcgcaacaa 26804956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 27306187 - 27306076
Alignment:
Q  4 cttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcat 103  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||||| | ||||    
T  27306187 cttttggcttgtgattataattgttccatacactttg-ttttggttgcttgactatcccttgttccacacatcaagtttgttattggtgtgatctctcat 27306089  T
Q  104 caaattcgcaaca 116  Q
    | |||||||||||    
T  27306088 cgaattcgcaaca 27306076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 42223486 - 42223601
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||  |||||||||||||||||||||||||||| |||||    
T  42223486 ctacttttgccttgtgtttataattgttttatacacttt-attttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgtttttt 42223584  T
Q  101 catcaaattcgcaacaa 117  Q
     ||| ||||||||||||    
T  42223585 tatcgaattcgcaacaa 42223601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42330960 - 42330846
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||| |||||||||||||||| ||||||| ||||||| |    
T  42330960 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtttattattggcgtgatttct 42330862  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  42330861 catcgaattcgcaaca 42330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9679389 - 9679492
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| | |||||  |||| |||||||||||||||||||||||||||| ||| |    
T  9679389 ctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttct 9679488  T
Q  101 catc 104  Q
    ||||    
T  9679489 catc 9679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21990480 - 21990570
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggt 91  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||| |||||||||||||||| ||||||||    
T  21990480 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22251544 - 22251452
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg 94  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||| || |||||||||||||||||||||||||    
T  22251544 ctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtg 22251452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44724907 - 44725023
Alignment:
Q  1 ctacttttggcttgtgtttataat-tgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||| ||||| |||||||||||||||||||||||||||| |||     
T  44724907 ctacttttggcttgtgtttataatatgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttc 44725005  T
Q  100 tcatcaaattcgcaacaa 117  Q
     |||| ||||||||||||    
T  44725006 ccatcgaattcgcaacaa 44725023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 443928 - 444027
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| |||||||||||  |||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||    
T  443928 ctacttttggcttgtgattataattgttcaatacactttg-ttttggttgcttgactattccttgctccacacatcaagtttgttattggtgtgagtttt 444026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9027145 - 9027034
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  9027145 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 9027050  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  9027049 catcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21680358 - 21680472
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||| | ||||||||||| | ||||||||||| ||||||||||||||  ||||    
T  21680358 ctacttttggcttgtgtttataattgttccatacactttg-tttttgttgcatgattattccttgcttcacacatcaagcttgttattggtgtgggtttt 21680456  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  21680457 catcgaattcacaaca 21680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7471932 - 7471820
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  7471932 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 7471837  T
Q  101 catcaaattcgcaacaa 117  Q
    |||  ||||||||||||    
T  7471836 cattgaattcgcaacaa 7471820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11759464 - 11759576
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||| ||||||||||||||||||    
T  11759464 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattttt 11759559  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  11759560 catcgaattcgcaacaa 11759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38394323 - 38394435
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  38394323 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 38394418  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  38394419 catcgaattcacaacaa 38394435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20299797 - 20299908
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||| ||||||||||||||||||    
T  20299797 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattttt 20299892  T
Q  101 catcaaattcgcaaca 116  Q
    |||||||||| |||||    
T  20299893 catcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28487890 - 28488000
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  28487890 ctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 28487985  T
Q  101 catcaaattcgcaac 115  Q
    |||| ||||||||||    
T  28487986 catcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 20297699 - 20297811
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||||| ||||||||||||||||||    
T  20297699 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgattttt 20297794  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  20297795 catcgaattcacaacaa 20297811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1606716 - 1606827
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| || ||||| ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  1606716 ctacttttggcttgtattta--attattccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 1606811  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  1606812 catcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1850318 - 1850429
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||      
T  1850318 ctacttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttca 1850413  T
Q  101 catcaaattcgcaaca 116  Q
     ||| |||||||||||    
T  1850414 aatcgaattcgcaaca 1850429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 40550192 - 40550278
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  40550192 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 40550278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7351603 - 7351490
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||||||||| ||||  ||||||||||||| ||||||||||||||| ||||    
T  7351603 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttaattatcccttactccacacatcaag-ttgttattggtgtgattttt 7351508  T
Q  100 tcatcaaattcgcaacaa 117  Q
    ||||| ||||| ||||||    
T  7351507 tcatcgaattcacaacaa 7351490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40836695 - 40836582
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| ||||||||| || ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  40836695 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 40836600  T
Q  101 c-atcaaattcgcaacaa 117  Q
    | ||| ||||||||||||    
T  40836599 cgatcgaattcgcaacaa 40836582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7094412 - 7094300
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| || ||||||| ||||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  7094412 ctacttttgacttgtattta--attgttccacacacttt-attttggttgcttgactatgccttgctccacacatcaagtttgttattggtgtga-tttt 7094317  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  7094316 catcgaattcgcaacaa 7094300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 7349228 - 7349116
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-ttttt 100  Q
    |||||||||||||| ||||||| |  |||||||||||| ||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||| |||||    
T  7349228 tacttttggcttgtatttataact--ttcatacacttt-attttggttgcttaattatcccttactccacacatcaag-ttgttattggtgtgatttttt 7349133  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  7349132 catcgaattcacaacaa 7349116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28485902 - 28486014
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||| |||| |||||||||||| ||||| ||||| |||||| |||||||| ||||||||||||||||||    
T  28485902 ctacttttggcttgtattta--attgttccatacattttg-ttttggttgcttgattatcccttgctccacatatcaagtt-gttattggtgtgattttt 28485997  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  28485998 catcgaattcacaacaa 28486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44901 - 45012
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| |||||| ||||  |||||| ||||||||||| |||||||||||| ||||| | ||| ||||||||||||||| |||||||||||||||| |    
T  44901 ctactttttgcttgtattta--attgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtt-gttattggtgtgatttct 44996  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  44997 catcgaattcgcaaca 45012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21592102 - 21591989
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||  | |||||  |||| ||||||||||||||||||||| |  ||| ||| |    
T  21592102 ctacttttggcttgtgtttataattgttccatacacttt--ttttggttgtctgattatcacttgctccacacatcaagtttgttatagccgtgttttct 21592005  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  21592004 catcgaattcgcaaca 21591989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25542865 - 25542976
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||| |||| ||||| |||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  25542865 ctacttttggcttgtattta--attgttccatacattttg-ttttgattgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 25542960  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  25542961 catcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 22137442 - 22137527
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||| || ||||| |||||    
T  22137442 catacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaaca 22137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24465863 - 24465977
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||| |||||| |  | ||||||||||| |||||||||||| | |||  ||||||||||||||||| ||| |||||||||||||||||    
T  24465863 ctacttttggtttgtgattataact--tccatacactttg-ttttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgattttt 24465959  T
Q  101 catcaaattcgcaacaac 118  Q
    |||| ||||| |||||||    
T  24465960 catcgaattcacaacaac 24465977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38396976 - 38397084
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||||||  |||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  38396976 ctacttttggcttgtattta--attgttctatacactttg-ttttggttgctttattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 38397070  T
Q  101 catcaaattcgcaa 114  Q
    |||| |||||||||    
T  38397071 catcgaattcgcaa 38397084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 39145945 - 39145856
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggt 91  Q
    |||||||||| |||||||||||||||||| ||||| |||| |||||||||||| |||||  |||  |||||||||||||||||||||||||    
T  39145945 ctacttttggtttgtgtttataattgtttaatacaatttg-ttttggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 40552469 - 40552554
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||| || ||||| |||||    
T  40552469 catacgctttgattttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaaca 40552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 7469974 - 7469863
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||| ||||||| ||||| ||| | |||||||||||| || ||||||||||||||||||    
T  7469974 ctacttttggcttgtattta--attgttccatacactttg-ttttagttgcttgattatccct-gctccacacatcaaatt-gttattggtgtgattttt 7469880  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  7469879 catcgaattcgcaacaa 7469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35966 - 36065
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| |||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||| |    
T  35966 ctacttttggtttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttct 36061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 7092147 - 7092053
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||| || ||||||| ||||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  7092147 taattgttccacacacttt-attttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaatttgcaacaa 7092053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20626370 - 20626481
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| | ||||||| |  | |||||||||| ||||||||||||| |||||  |||| ||||||||||| ||| ||||||||||||||||||    
T  20626370 ctacttttggcttatatttataact--tccatacacttt-attttggttgcttgattatctcttgctccacacatcaggtt-gttattggtgtgattttt 20626465  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  20626466 catcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20630261 - 20630372
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| | ||||||| |  | |||||||||| ||||||||||||| |||||  |||| ||||||||||| ||| ||||||||||||||||||    
T  20630261 ctacttttggcttatatttataact--tccatacacttt-attttggttgcttgattatctcttgctccacacatcaggtt-gttattggtgtgattttt 20630356  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  20630357 catcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20642680 - 20642791
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| | ||||||| |  | |||||||||| ||||||||||||| |||||  |||| ||||||||||| ||| ||||||||||||||||||    
T  20642680 ctacttttggcttatatttataact--tccatacacttt-attttggttgcttgattatctcttgctccacacatcaggtt-gttattggtgtgattttt 20642775  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  20642776 catcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26295774 - 26295885
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||| |||||| |||||  | || |||| ||||||||| | |||||||||||||||||    
T  26295774 ctacttttggcttgtgtttataat--tttcatacactttg-ttttgattgcttgattatcacgtgctccatacatcaagtat-ttattggtgtgattttt 26295869  T
Q  101 catcaaattcgcaaca 116  Q
    |||||| ||| |||||    
T  26295870 catcaatttcacaaca 26295885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 48457990 - 48458100
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  48457990 ctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 48458084  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  48458085 catcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27832600 - 27832487
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||| |||||| |  | ||||||||||| |||||||| ||| |||||| | || ||||||||| ||||||||||||||| ||||||||    
T  27832600 ctacttttggtttgtgattataact--tccatacactttg-ttttggttacttgattatttcctgctccacacattaagtttgttattggtatgattttt 27832504  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  27832503 catcgaattcacaacaa 27832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 40946671 - 40946759
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatt 97  Q
    ||||||||||| ||||  |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||| |||||||    
T  40946671 ttttggcttgtattta--attgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattgatgtgatt 40946759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 2935610 - 2935716
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||| ||||| | ||||||||||| ||||||||||||||| ||||||||    
T  2935610 ttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgcttcacacatcaag-ttgttattggtgtga-ttttcatc 2935704  T
Q  105 aaattcgcaaca 116  Q
     ||||| |||||    
T  2935705 gaattcacaaca 2935716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 24748949 - 24749036
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt-tcatcaaattcgcaacaa 117  Q
    ||||||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||||||| |||| ||||| ||||| ||||||    
T  24748949 catacactttg-ttttggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaa 24749036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43253468 - 43253358
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||  ||||||||||||||| ||||    
T  43253468 ctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaa-attgttattggtgtga-tttt 43253374  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  43253373 catcgaattcgcaaca 43253358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 1049239 - 1049128
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgatttt-ggttgcttaattattccttgttccacacatcaagtttgttattggtgtg-atttttca 102  Q
    ||||||||||| ||||||| |  ||||||||||||| |||| |||||||| |||||  |||| ||||||||||||| |||||||||||||| |||||||     
T  1049239 ttttggcttgtatttataact--ttcatacactttgttttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgaatttttct 1049143  T
Q  103 tcaaattcgcaacaa 117  Q
    || ||||||||||||    
T  1049142 tcgaattcgcaacaa 1049128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3036061 - 3036166
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| |||| ||||||| || |||||||||||||||| |    
T  3036061 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctcttgctccaaacatcaaatt-gttattggtgtgatttct 3036156  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  3036157 catcgaattc 3036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3878915 - 3879028
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| |||| ||||  |||||| |||||| |||  |||||||||||| |||||  |||| ||||||||||||| || |||||| |||||||| |    
T  3878915 ctacttttggtttgtattta--attgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaag-ttattattgatgtgatttct 3879011  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  3879012 catcgaattcgcaacaa 3879028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7188867 - 7188962
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||| |  | ||||||||||| |||||||||||| |||||| |||| |||||||||||||| | |||||| ||||||||||    
T  7188867 ctacttttg-cttgtgtttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttattgatgtgattttt 7188962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 22108432 - 22108483
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtt 81  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  22108432 catacgctttgattttggttgcttaattatcccttgctccacacatcaagtt 22108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 18345878 - 18345967
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg 94  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| | ||| ||||| ||||||||||||| ||||| ||||||||    
T  18345878 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaag-ttgttgttggtgtg 18345967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 26214780 - 26214699
Alignment:
Q  118 caccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    |||| |||||||| ||| || ||| ||||||| |||||||  ||||||||||| ||||||||||||| |||||||||||||||    
T  26214780 cacctataaaata-ctttatctgtggagcaaattaatcaagcaaccaaaacaacgtgggtgacagttataaacacaagcaaaa 26214699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 31153739 - 31153690
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  31153739 tccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 31153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 1046831 - 1046756
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttttcatcaaattcgcaacaa 117  Q
    |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||| |||||| || ||||||||||||    
T  1046831 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttttcttcgaattcgcaacaa 1046756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 16296940 - 16296996
Alignment:
Q  160 aaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||||||||| ||||| || ||||||||||||||| |||||||| ||||||    
T  16296940 aaccaaaacaaagtggctgacaattataaacacaagcaaaagtagaaaacgacgaga 16296996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 7188951 - 7188855
Alignment:
Q  121 caataaaataacttgatgtgtagagcaa--agtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||||||| |||||||||| ||||||  | |||||||  |||||||||||||||  ||  |||| ||||||||||||||| ||||||||| |||||    
T  7188951 caataaaata-cttgatgtgtggagcaagtaataatcaagcaaccaaaacaaagtgtatggaagttataaacacaagcaaaagtagaaaacagcgaga 7188855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 24813445 - 24813364
Alignment:
Q  15 tgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||| |   ||| ||||| |||||||||| |||||| |||| |||||||||||||| | |||||| |||||||||    
T  24813445 tgtttataattgttac---cacgttgatattggttgcttgattattacttgctccacacatcaagtattttattgatgtgatttt 24813364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 25276487 - 25276550
Alignment:
Q  34 cactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||| ||||   |||| ||||||||||||||| ||||||||||||||||||    
T  25276487 cactttgatattggttgcttgattaa--cttgatccacacatcaagtt-gttattggtgtgattttt 25276550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 26210958 - 26210876
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa 200  Q
    ||||||||||||||  ||||| | | || |||| |||||||  |||||||||||  |||||||||||| |||||||||||||||    
T  26210958 acaccaataaaatat-ttgatattttgaacaaattaatcaagcaaccaaaacaacttgggtgacagttataaacacaagcaaaa 26210876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 24749011 - 24748911
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaag--taatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacga 214  Q
    |||||||||| | |||||||||||| |||||| |  |||||||  |||||||||||||||  ||  |||| ||| ||||| ||||| |||||||||||||    
T  24749011 acaccaataaca-aacttgatgtgtggagcaagggataatcaaacaaccaaaacaaagtgtatggaagttataatcacaaacaaaagtagaaaacaacga 24748913  T
Q  215 ga 216  Q
    ||    
T  24748912 ga 24748911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 1502883 - 1502832
Alignment:
Q  47 gttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||| |||||  |||| ||||||||||||||| |||||||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagtt-gttattggtgtgatttt 1502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 2990558 - 2990602
Alignment:
Q  172 gtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||| ||| |||| ||||||||||||||| |||||||||||||||    
T  2990558 gtggatgatagttataaacacaagcaaaattagaaaacaacgaga 2990602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 20137066 - 20136990
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttttcatcaaattcgcaacaa 117  Q
    |||||||||||| | ||| ||||| |||||||||||| ||| ||||| || ||| ||||||||| ||||| ||||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattttttcatcgaattcacaacaa 20136990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 25357328 - 25357360
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttt 99  Q
    |||||||||||||||||||||||||||| ||||    
T  25357328 tccacacatcaagtttgttattggtgtggtttt 25357360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15346699 - 15346806
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  15346699 ctacttttggcttgtgtttataattgttccatatactttg-ttttggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgattttt 15346797  T
Q  101 catcaaatt 109  Q
    |||| ||||    
T  15346798 catcgaatt 15346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15367384 - 15367499
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  | || ||||||||||||||||||||||||||||||||||    
T  15367384 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgattttt 15367482  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  15367483 catcgaattcacaacaa 15367499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3631898 - 3631783
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||  |||| ||||||| |||||||||||||||||||| |||||    
T  3631898 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtgtttttt 3631800  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  3631799 catcgaattcacaacaa 3631783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11982985 - 11982871
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||| || |||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  11982985 ctacttttggcttgtgattgtaattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgattttt 11982888  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  11982887 catcgaattcacaacaa 11982871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9020284 - 9020398
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||||||||  | |||||  |||| ||||||||||||||||||||||||||||||||||    
T  9020284 ctacttttggcttgtatttataattgttccatacactttg-ttttggttgtctgattatctcttgctccacacatcaagtttgttattggtgtgattttt 9020382  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  9020383 catcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3394722 - 3394838
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||  ||||||||||||| || ||||||||||| ||| |    
T  3394722 ctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtgttttct 3394821  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  3394822 catcgaattcgcaacaa 3394838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12195466 - 12195354
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  12195466 ctacttttggcttgtatttataact--ttcatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 12195370  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  12195369 catcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24338409 - 24338294
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||| | |||  |||| ||||||||||||||||||||||| ||||||||||    
T  24338409 ctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctccacacatcaagtttgttattgatgtgattttt 24338311  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  24338310 catcgaattcacaacaa 24338294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 3629821 - 3629711
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||| |||||||||||||||||||||||||||| ||| |||||    
T  3629821 ttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgttttctcatc 3629723  T
Q  105 aaattcgcaaca 116  Q
     ||||| |||||    
T  3629722 gaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30728783 - 30728668
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| |||||||||||| ||||||||||| ||||||||| || | ||| ||||| ||||||||||||||||||||||||||||||||||    
T  30728783 ctacttttgacttgtatttataattgttccatacactttg-ttttggttgtttgactatcccttgctccacacatcaagtttgttattggtgtgattttt 30728685  T
Q  101 catcaaattcgcaacaa 117  Q
    || | ||||||| ||||    
T  30728684 caacgaattcgctacaa 30728668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3233682 - 3233567
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||  |||  |||||||||||| |||||||||| |||| ||| |    
T  3233682 ctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttactccacacatcaaatttgttattgatgtgttttct 3233583  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  3233582 catcgaattcgcaaca 3233567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2628838 - 2628725
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | |||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  2628838 ctacttttggcttgtatttataact--tccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 2628743  T
Q  101 catcaaattcgcaacaac 118  Q
    |||| |||||||||||||    
T  2628742 catcgaattcgcaacaac 2628725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26932514 - 26932402
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||| |||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  26932514 ctacctttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgattttt 26932419  T
Q  101 catcaaattcgcaacaa 117  Q
    |||||||||| ||||||    
T  26932418 catcaaattcacaacaa 26932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33309218 - 33309330
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  33309218 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 33309313  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  33309314 catcgaattcacaacaa 33309330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33311487 - 33311598
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  33311487 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 33311582  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  33311583 catcgaattcacaaca 33311598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 26068342 - 26068234
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  26068342 ttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 26068247  T
Q  105 aaattcgcaacaa 117  Q
     ||||| ||||||    
T  26068246 gaattcacaacaa 26068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26065341 - 26065440
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||| |||| |||||| |||| ||||| |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||||||||    
T  26065341 ctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgattttt 26065439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 26066068 - 26065961
Alignment:
Q  5 ttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    ||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  26066068 ttttggcttgtattta--attgttccatacgctttg-ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatc 26065973  T
Q  105 aaattcgcaaca 116  Q
     ||||| |||||    
T  26065972 gaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26085310 - 26085409
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||| |||| |||||| |||| ||||| |||||||||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||||||||    
T  26085310 ctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtgattttt 26085408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 1230200 - 1230089
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    |||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||     
T  1230200 tacttttggctt-tgtatttaattgtttcatacacttt-attttggttgcttgattatctcttgatccacacatcaag-ttgttattggtgtgattttt- 1230105  T
Q  102 atcaaattcgcaacaa 117  Q
    ||| ||||||||||||    
T  1230104 atcgaattcgcaacaa 1230089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15530121 - 15530022
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| |||||||||||| |||||||||  |||||| |||  | ||||||||||  ||||||||||||||||||||||||||||| ||||    
T  15530121 ctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtgtgagtttt 15530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 19696881 - 19696791
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaa 208  Q
    |||||||||||||| |||||||||| |||||||||||||||  |||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  19696881 acaccaataaaata-cttgatgtgtggagcaaagtaatcaagcaaccgaaacaaagtgggtgacagttataaacacaaacaaaagtagaaaa 19696791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5273168 - 5273055
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtga-tttt 99  Q
    ||||||||||||||| |||| || |  | |||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  5273168 ctacttttggcttgtatttaaaaat--tacatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 5273072  T
Q  100 tcatcaaattcgcaaca 116  Q
    ||||| ||||| |||||    
T  5273071 tcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14458719 - 14458606
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||||||| | ||||| | ||  |||||||||||||  | |||||||||||||||||    
T  14458719 ctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatccattactccacacatcaag-ctattattggtgtgattttt 14458623  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  14458622 catcgaattcgcaacaa 14458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4816182 - 4816071
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  4816182 ctacttttgacttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 4816087  T
Q  101 catcaaattcgcaaca 116  Q
     |||| |||| |||||    
T  4816086 gatcagattcacaaca 4816071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 13057587 - 13057659
Alignment:
Q  44 ttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13057587 ttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19704517 - 19704422
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgatttt-ggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattt 98  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||| |||||||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  19704517 ctacttttggcttgtattta--attgttccatacactttgatttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattt 19704422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 29754642 - 29754549
Alignment:
Q  21 taattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||| ||||| ||||| |||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  29754642 taattgttccatacgctttg-ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 18322482 - 18322566
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  18322482 catacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatagaattcgcaaca 18322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14507128 - 14507017
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| | ||    
T  14507128 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tatt 14507034  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| |||| |||||||    
T  14507033 catcgaatttgcaacaa 14507017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 22869972 - 22870071
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaa-atagaaaacaacgag 215  Q
    |||||||||||||| |||||||||| ||| ||| |||||||  ||||||||||| ||||||||| ||| |||||||||| |||| |||||||||||||||    
T  22869972 acaccaataaaata-cttgatgtgttgagaaaattaatcaagcaaccaaaacaatgtgggtgacggttataaacacaagaaaaagatagaaaacaacgag 22870070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25480233 - 25480347
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||||  | ||| ||||  || ||||||||| | | |||||||||||||||||    
T  25480233 ctacttttgacttgtgattataattgtttcatacacttt-attttggttgctcgactatcccttactctacacatcaaatat-ttattggtgtgattttt 25480330  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  25480331 catcgaattcacaacaa 25480347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 8717268 - 8717194
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcacaacaa 8717194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 17012415 - 17012503
Alignment:
Q  28 ttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||||||||||| |||||||||||| ||||||  ||| |||||||||||||| | |||||| |||||||||||||| ||||| ||||||    
T  17012415 ttcatacactttg-ttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgatttttcatcgaattcacaacaa 17012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28241273 - 28241162
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| ||||| |||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  28241273 ctacttttggcttgtattta--attgttccatacactttg-ttttgattgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 28241179  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  28241178 catcgaattcacaacaa 28241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20915308 - 20915197
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  ||| |||||||||||||| |||||||||||| ||||  |||||  ||||||||||||||  |||||||||||||||||    
T  20915308 ctacttttggcttgtattta--attatttcatacactttg-ttttggttgcttgattaccccttgccccacacatcaagtta-ttattggtgtgattttt 20915213  T
Q  101 catcaaattcgcaaca 116  Q
     |||| |||| |||||    
T  20915212 gatcagattcacaaca 20915197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1069677 - 1069563
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||| |||||| | ||| ||||| |||| ||||| | |||||||||||| |  ||| |    
T  1069677 ctactttttgcttgtgtttataattgttccatacactttg-ttttgattgcttgactatcccttgctccatacatcgaatttgttattggtatattttct 1069579  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  1069578 catcgaattcacaaca 1069563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 15541064 - 15540989
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||| ||| | ||| ||||| ||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  15541064 ttttggtttcttgactatcccttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaacaa 15540989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22611030 - 22611138
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| |   ||||||||| |||||||||| ||||||  ||| |||||||||||||| | |||||||||||| ||||    
T  22611030 ctacttttg-cttgtgtttataattgttcc---cactttgatattggttgcttgattatt--ttgctccacacatcaagtattttattggtgtga-tttt 22611122  T
Q  101 catcaaattcgcaaca 116  Q
    |||| || ||||||||    
T  22611123 catcgaactcgcaaca 22611138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30034555 - 30034446
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||| |||||| ||||||| |  |||||||||||||  ||||||||||| ||||| ||||| |||| |||||||||| ||||||||||||| ||||    
T  30034555 ctacttttagcttgtatttataact--ttcatacactttg--tttggttgcttgattat-ccttgctccatacatcaagtt-gttattggtgtga-tttt 30034463  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||||||||||    
T  30034462 catcgaattcgcaacaa 30034446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 13040183 - 13040232
Alignment:
Q  67 tccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaaca 116  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  13040183 tccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaaca 13040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 22491005 - 22491073
Alignment:
Q  42 ttttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattc 110  Q
    |||||||||||| ||||| | | | ||||||||| |||||||||||||||||||||||||||| |||||    
T  22491005 ttttggttgcttgattatccttagctccacacattaagtttgttattggtgtgatttttcatcgaattc 22491073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 30443718 - 30443634
Alignment:
Q  131 acttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacga 214  Q
    |||| |||||| ||| ||| |||||||  |||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  30443718 actttatgtgttgagaaaaataatcaagaaaccaatatcaaagtgggtaacaattttaaacacaagcaaaaatagaaaacaacga 30443634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 6610384 - 6610478
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaac 212  Q
    |||||||||||||| ||| |||||| ||||||| |||||||  |||||||||||||||| | ||| || |||||| |||||||| || ||||||||    
T  6610384 acaccaataaaata-cttaatgtgtggagcaaaataatcaagcaaccaaaacaaagtggataacaattataaacataagcaaaagtataaaacaac 6610478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 22611116 - 22611018
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaa-caaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgag 215  Q
    |||||||||||||| |||||||||| ||||||| |||||||  |||||| | |||||||||  ||| || ||||||||||||||| |||||||||| |||    
T  22611116 acaccaataaaata-cttgatgtgtggagcaaaataatcaagcaaccaatatcaaagtggga-acaattataaacacaagcaaaagtagaaaacaatgag 22611019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 26505278 - 26505358
Alignment:
Q  136 atgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||||| || |||| |||||||  ||| ||||||| |||||| |||||| |||||||||| |||| |||||||||||||||    
T  26505278 atgtgtggaacaaattaatcaaacaactaaaacaacgtgggtaacagttgtaaacacaagaaaaagtagaaaacaacgaga 26505358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 14466703 - 14466785
Alignment:
Q  27 tttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattc 110  Q
    ||||||||| |||| |||||||||||| | |||  |||| | |||||||||| ||| ||||||||||||||||||||| |||||    
T  14466703 tttcatacattttg-ttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgatttttcatcgaattc 14466785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 10584357 - 10584414
Alignment:
Q  61 ccttgttccacacatcaagtttgttattggtgtgatttt-tcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||| ||||| ||||||    
T  10584357 ccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaa 10584414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26945499 - 26945598
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||||||||||| |  | | |||||||||  |||| ||  || |||||| |||||| |||| ||||||| | |||||||||||||||||    
T  26945499 ctacttttggcttgtgtttataact--tccttacactttg--tttgattctttgattattacttgtttcacatatcaagtgttttattggtgtgattttt 26945594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 28078157 - 28078063
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||||||||||||| || |   ||| ||||| |||||||||| ||||||  ||| |||||||||||||| | |||||||||||||||||    
T  28078157 ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 28078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32280352 - 32280463
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| |||||||||||| |  ||   ||| | |||||||||| |||||  |||  |||| ||||||||||||||||| |||||||||||    
T  32280352 ctacttttggcttgtatttataattgttacccac---ttg-tattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattttt 32280447  T
Q  101 catcaaattcgcaaca 116  Q
     ||| ||||| |||||    
T  32280448 tatcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 17904280 - 17904324
Alignment:
Q  172 gtgggtgacagttttaaacacaagcaaaaatagaaaacaacgaga 216  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||    
T  17904280 gtggatgacagttataaacacaagcaaaattagaaaacaacgaga 17904324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 20527152 - 20527084
Alignment:
Q  143 gagcaaagtaatcaattaaccaaaac-aaagtgggtgacagttttaaacacaagcaaaaatagaaaaca 210  Q
    ||||||| |||||||  ||||||||  ||||| |||||||||| ||||||||||||||| |||||||||    
T  20527152 gagcaaaataatcaagcaaccaaaaataaagttggtgacagttataaacacaagcaaaagtagaaaaca 20527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30967563 - 30967673
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| ||||| ||||  ||| || ||| ||||||| |||||||| ||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  30967563 ctacttttgacttgtattta--attattccatgcactttg-ttttggttacttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 30967657  T
Q  101 catcaaattcgcaaca 116  Q
    || | |||||||||||    
T  30967658 caacgaattcgcaaca 30967673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 6610462 - 6610378
Alignment:
Q  10 gcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    |||| ||||||||||||||  || ||||||| |||||||||||| ||||||  ||| ||||||||| |||| | ||||||||||||||||    
T  6610462 gcttatgtttataattgtt--atccactttg-ttttggttgcttgattatt--ttgctccacacattaagtattttattggtgtgatttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25465552 - 25465443
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||| ||||||||||||| |   ||| ||||| |||||||||| ||||||  ||| |||| ||||||||| | |||||||||||| ||||    
T  25465552 ctacttttg-cttgagtttataattgttcc---cacgttgatattggttgcttgattatt--ttgctccatacatcaagtattttattggtgtga-tttt 25465460  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  25465459 catcgaattcacaacaa 25465443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 3629734 - 3629838
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaag--taatcaattaaccaaaacaaagtgggtg--acagttttaaacacaagc--aaaaatagaaaaca 210  Q
    |||||||||| | |||||||||||| ||||||||  |||||||  |||||||||||||||  ||  ||| || |||||||||||  |||| |||||||||    
T  3629734 acaccaataaca-aacttgatgtgtggagcaaaggataatcaagcaaccaaaacaaagtgtatggaacaattataaacacaagccaaaaagtagaaaaca 3629832  T
Q  211 acgaga 216  Q
    ||||||    
T  3629833 acgaga 3629838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 3918819 - 3918748
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaa 189  Q
    |||||||||||||| ||| || ||| ||||||| |||||||  ||||||||||| ||| ||||||||| ||||    
T  3918819 acaccaataaaata-cttaatttgtggagcaaattaatcaagcaaccaaaacaacgtgagtgacagttataaa 3918748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 3919218 - 3919147
Alignment:
Q  117 acaccaataaaataacttgatgtgtagagcaaagtaatcaattaaccaaaacaaagtgggtgacagttttaaa 189  Q
    |||||||||||||| ||| || ||||||||||| |||||||  ||||||||||| ||  ||||||||| ||||    
T  3919218 acaccaataaaata-cttaatttgtagagcaaattaatcaagcaaccaaaacaatgtaagtgacagttataaa 3919147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 85558 - 85671
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||  |||| ||||||||| ||| ||||||||||||||||||||    
T  85558 ctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaagattgttattggtgtgattttt 85657  T
Q  101 catcaaattcgcaa 114  Q
    |||| |||||||||    
T  85658 catcgaattcgcaa 85671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 14343 - 14230
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  14343 ctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 14247  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  14246 catcgaattcacaacaa 14230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 15393 - 15433
Alignment:
Q  70 acacatcaagtttgttattggtgtgatttttcatcaaattc 110  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  15393 acacatcaagtttgttattggtgtgatttttcatcgaattc 15433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6535 - 6649
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||| |||    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  6535 ctacttttggcttgtatttattattc---catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 6630  T
Q  101 catcaaattcgcaacaaca 119  Q
    |||| ||||| ||||||||    
T  6631 catcgaattcacaacaaca 6649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11430 - 11315
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacacttt-gattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgat-tt 98  Q
    |||||||||||||||| ||||||||||| ||||||||||   |||| ||||||||||||||||||  ||||||||||||| |||||||||||||||| ||    
T  11430 ctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttactccacacatcaag-ttgttattggtgtgatatt 11332  T
Q  99 ttcatcaaattcgcaac 115  Q
    |||||| ||||||||||    
T  11331 ttcatcgaattcgcaac 11315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12826 - 12714
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  12826 ctacttttggcttgtatttataact--ttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcattttt 12731  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  12730 catcgaattcacaacaa 12714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 361 - 473
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||| |    
T  361 ctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttct 457  T
Q  101 catcaaattcgcaaca 116  Q
    || | ||||| |||||    
T  458 caacgaattcacaaca 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 24754 - 24840
Alignment:
Q  30 catacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  24754 catacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 24840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 22485 - 22565
Alignment:
Q  36 ctttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttcatcaaattcgcaacaa 117  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||    
T  22485 ctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaa 22565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1404 - 1309
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||    
T  1404 ctacttttggcttgtattta--attgttacatacactttg-ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttt 1309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29506 - 29616
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||| | ||||  |||||| ||||||||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  29506 ctacttttggcttttattta--attgttccatacactttg-ttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-tttt 29600  T
Q  101 catcaaattcgcaaca 116  Q
    |||| |||||||||||    
T  29601 catcgaattcgcaaca 29616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 69244 - 69133
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||||| |  | |||||| |||| |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  69244 ctacttttggcttgtatttataact--tccatacattttg-ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga-tttt 69149  T
Q  101 catcaaattcgcaaca 116  Q
    |||| ||||| |||||    
T  69148 catcgaattcacaaca 69133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1403 - 1298
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| |||||||||||| |||||   ||  ||||||||||||||| ||||||||||||||||||    
T  1403 ctacttttggcttgtattta--attgttccatacactttg-ttttggttgcttgattatctttttctccacacatcaagtt-gttattggtgtgattttt 1308  T
Q  101 catcaaattc 110  Q
    |||| |||||    
T  1307 catcgaattc 1298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4323 - 4415
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtg 94  Q
    ||||||||||||||||||||||||| ||  ||||||||  |||||| |||||| ||||| ||||  ||||||||||||||||||||||| ||||    
T  4323 ctacttttggcttgtgtttataattattctatacacttc-attttgattgcttgattatcccttactccacacatcaagtttgttattgatgtg 4415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41435 - 41324
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||||||||| ||||| |||||| |||||  |||| ||||||||||||| ||||||||||||||| ||||    
T  41435 ctacttttggcttgtattta--attgttccatacactttg-ttttgattgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-tttt 41341  T
Q  101 catcaaattcgcaacaa 117  Q
    |||| ||||| ||||||    
T  41340 catcgaattcacaacaa 41324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 3240 - 3309
Alignment:
Q  27 tttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||  ||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  3240 tttcatacactttg--tttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 3309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1602 - 1509
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttt 99  Q
    ||||||||||||||||||||||| |  | |||||||||||  ||||||||||| |||||| |||| |||||||||||| | | ||||||||||||||||    
T  1602 ctacttttggcttgtgtttataact--tccatacactttg--tttggttgcttgattattacttgctccacacatcaaatat-ttattggtgtgatttt 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4629 - 4517
Alignment:
Q  1 ctacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgattttt 100  Q
    ||||||||||||||| ||||  |||||| ||||| |||||| |||| |||||| ||||| ||||  |||||||||||| || |||||||||||||||||     
T  4629 ctacttttggcttgtattta--attgttccatacgctttgactttg-ttgcttgattatcccttactccacacatcaaatt-gttattggtgtgattttg 4534  T
Q  101 catcaaattcgcaacaa 117  Q
     |||| |||| ||||||    
T  4533 gatcagattcacaacaa 4517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 9 - 50
Alignment:
Q  62 cttgttccacacatcaagtttgttattggtgtgatttttcatc 104  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  9 cttgctccacacatcaagtt-gttattggtgtgatttttcatc 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 5136 - 5234
Alignment:
Q  2 tacttttggcttgtgtttataattgtttcatacactttgattttggttgcttaattattccttgttccacacatcaagtttgttattggtgtgatttttc 101  Q
    ||||||||||||| ||||||||    | |||||||||| |||||| |||||| |||||| ||||||  | ||||||||| | ||| ||||||||||||||    
T  5136 tacttttggcttgcgtttataacg--tccatacacttttattttg-ttgcttgattattacttgtttgatacatcaagtattttaatggtgtgatttttc 5232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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