View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1204_high_75 (Length: 273)

Name: NF1204_high_75
Description: NF1204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1204_high_75
NF1204_high_75
[»] chr2 (45 HSPs)
chr2 (7-205)||(3001271-3001465)
chr2 (18-94)||(34041589-34041665)
chr2 (8-94)||(4060205-4060291)
chr2 (19-93)||(35916086-35916160)
chr2 (7-93)||(40416380-40416466)
chr2 (18-94)||(37480074-37480150)
chr2 (18-94)||(39714991-39715067)
chr2 (18-93)||(42327396-42327471)
chr2 (7-93)||(19244109-19244195)
chr2 (37-93)||(4438999-4439055)
chr2 (7-95)||(14500275-14500363)
chr2 (18-94)||(29503270-29503346)
chr2 (18-97)||(7799036-7799115)
chr2 (15-93)||(28846691-28846769)
chr2 (40-93)||(5147702-5147755)
chr2 (14-99)||(13803489-13803574)
chr2 (7-92)||(16918568-16918653)
chr2 (14-94)||(11738041-11738121)
chr2 (37-93)||(16381674-16381730)
chr2 (18-94)||(29197377-29197453)
chr2 (18-93)||(12994377-12994452)
chr2 (22-93)||(18259730-18259801)
chr2 (18-89)||(24191842-24191913)
chr2 (18-93)||(42860348-42860423)
chr2 (7-93)||(42922414-42922501)
chr2 (40-94)||(42602553-42602607)
chr2 (18-94)||(21213768-21213844)
chr2 (18-93)||(24144676-24144749)
chr2 (18-62)||(31573642-31573686)
chr2 (15-94)||(38854460-38854539)
chr2 (18-52)||(21939124-21939158)
chr2 (18-52)||(33582014-33582048)
chr2 (12-94)||(35710390-35710472)
chr2 (15-93)||(41908636-41908714)
chr2 (8-93)||(1435064-1435148)
chr2 (37-94)||(1729815-1729872)
chr2 (18-86)||(7599982-7600050)
chr2 (65-93)||(9318122-9318150)
chr2 (22-86)||(9577843-9577907)
chr2 (18-94)||(30808648-30808724)
chr2 (41-93)||(32106566-32106618)
chr2 (18-90)||(33962785-33962857)
chr2 (54-94)||(36042345-36042385)
chr2 (18-98)||(42222876-42222956)
chr2 (22-94)||(45672383-45672455)
[»] chr1 (56 HSPs)
chr1 (18-96)||(51814491-51814569)
chr1 (8-82)||(52336765-52336839)
chr1 (18-93)||(19528328-19528403)
chr1 (18-95)||(25297770-25297847)
chr1 (7-91)||(33700763-33700847)
chr1 (7-94)||(8904413-8904500)
chr1 (7-93)||(2799862-2799948)
chr1 (8-89)||(17745247-17745328)
chr1 (9-94)||(34460901-34460986)
chr1 (22-94)||(40257398-40257470)
chr1 (7-94)||(8177172-8177259)
chr1 (18-89)||(9224779-9224850)
chr1 (39-90)||(24730387-24730438)
chr1 (7-93)||(9165185-9165271)
chr1 (8-90)||(15786311-15786393)
chr1 (33-95)||(26232402-26232464)
chr1 (22-96)||(29817672-29817746)
chr1 (43-93)||(38978968-38979018)
chr1 (13-93)||(521218-521298)
chr1 (18-86)||(17410238-17410306)
chr1 (18-94)||(36371469-36371545)
chr1 (18-86)||(42983375-42983443)
chr1 (18-93)||(16893394-16893469)
chr1 (18-93)||(37400274-37400349)
chr1 (18-93)||(44961765-44961840)
chr1 (7-80)||(28411343-28411416)
chr1 (20-93)||(30420310-30420383)
chr1 (18-94)||(4566547-4566623)
chr1 (18-86)||(13578718-13578786)
chr1 (18-94)||(21547481-21547557)
chr1 (37-93)||(31794284-31794340)
chr1 (14-93)||(7743322-7743401)
chr1 (18-93)||(9117119-9117194)
chr1 (26-93)||(11068852-11068919)
chr1 (18-93)||(12259260-12259335)
chr1 (18-69)||(12587294-12587345)
chr1 (18-89)||(14787337-14787408)
chr1 (18-93)||(16169979-16170054)
chr1 (37-96)||(41508828-41508887)
chr1 (8-75)||(50919972-50920039)
chr1 (18-73)||(52029938-52029993)
chr1 (9-95)||(1247111-1247197)
chr1 (8-94)||(6650594-6650680)
chr1 (27-73)||(36124853-36124899)
chr1 (38-92)||(44126396-44126450)
chr1 (37-94)||(2074001-2074057)
chr1 (14-83)||(9879448-9879517)
chr1 (22-63)||(26232366-26232407)
chr1 (8-94)||(31049608-31049698)
chr1 (37-86)||(47720837-47720886)
chr1 (37-86)||(47727829-47727878)
chr1 (18-94)||(6122793-6122869)
chr1 (37-93)||(11438504-11438560)
chr1 (37-89)||(19088213-19088265)
chr1 (18-93)||(50901581-50901657)
chr1 (37-93)||(51703779-51703835)
[»] chr3 (50 HSPs)
chr3 (22-95)||(5499412-5499485)
chr3 (18-92)||(47454618-47454692)
chr3 (18-95)||(10499110-10499187)
chr3 (7-94)||(30311305-30311392)
chr3 (18-93)||(37788466-37788541)
chr3 (20-93)||(2597223-2597296)
chr3 (14-86)||(2667869-2667941)
chr3 (6-93)||(10445128-10445216)
chr3 (18-94)||(19154630-19154706)
chr3 (14-93)||(203090-203169)
chr3 (19-94)||(9557319-9557394)
chr3 (18-93)||(14186648-14186722)
chr3 (7-94)||(15048051-15048138)
chr3 (14-93)||(31788967-31789046)
chr3 (7-93)||(16354882-16354968)
chr3 (37-95)||(26988994-26989051)
chr3 (8-93)||(4222141-4222226)
chr3 (37-90)||(28928899-28928952)
chr3 (18-95)||(31520606-31520683)
chr3 (37-94)||(46518627-46518684)
chr3 (18-86)||(4844512-4844580)
chr3 (18-86)||(4870208-4870276)
chr3 (14-94)||(11642206-11642286)
chr3 (7-95)||(27093351-27093439)
chr3 (18-94)||(36720380-36720456)
chr3 (18-85)||(12761520-12761587)
chr3 (18-93)||(35111180-35111255)
chr3 (18-93)||(40063619-40063694)
chr3 (18-89)||(49494147-49494218)
chr3 (19-85)||(11612307-11612373)
chr3 (18-94)||(8368800-8368876)
chr3 (18-82)||(32651439-32651503)
chr3 (18-93)||(8170672-8170747)
chr3 (18-93)||(21960551-21960626)
chr3 (18-93)||(51903879-51903954)
chr3 (7-90)||(53412948-53413031)
chr3 (37-95)||(7975416-7975474)
chr3 (7-93)||(28703394-28703480)
chr3 (39-93)||(42430335-42430388)
chr3 (18-94)||(15566629-15566702)
chr3 (19-68)||(36459252-36459301)
chr3 (34-95)||(36797685-36797746)
chr3 (14-51)||(44743852-44743889)
chr3 (18-51)||(52769984-52770017)
chr3 (33-90)||(53473368-53473425)
chr3 (18-94)||(8051213-8051289)
chr3 (65-93)||(8796140-8796168)
chr3 (37-93)||(19341801-19341857)
chr3 (18-90)||(30510200-30510272)
chr3 (62-94)||(34622567-34622599)
[»] chr7 (59 HSPs)
chr7 (14-94)||(45709705-45709785)
chr7 (15-93)||(48771938-48772016)
chr7 (18-93)||(24513797-24513872)
chr7 (7-93)||(26459400-26459486)
chr7 (18-93)||(26199509-26199584)
chr7 (21-88)||(41519268-41519335)
chr7 (14-92)||(2495833-2495911)
chr7 (8-93)||(15137553-15137638)
chr7 (18-95)||(43215182-43215259)
chr7 (18-94)||(23552117-23552193)
chr7 (20-96)||(43663098-43663174)
chr7 (18-93)||(18363696-18363771)
chr7 (18-93)||(22760863-22760938)
chr7 (37-92)||(22927477-22927532)
chr7 (18-93)||(23301603-23301678)
chr7 (18-93)||(25590611-25590686)
chr7 (7-94)||(30579334-30579421)
chr7 (37-94)||(23595728-23595785)
chr7 (18-94)||(17041013-17041089)
chr7 (37-93)||(25021355-25021411)
chr7 (7-95)||(25655218-25655306)
chr7 (18-94)||(35119382-35119458)
chr7 (18-98)||(39631839-39631919)
chr7 (18-93)||(20335832-20335907)
chr7 (19-94)||(23945860-23945935)
chr7 (54-97)||(24107298-24107341)
chr7 (18-93)||(39499720-39499795)
chr7 (24-93)||(18011356-18011426)
chr7 (15-93)||(31835192-31835270)
chr7 (8-98)||(33869436-33869526)
chr7 (18-92)||(35513467-35513541)
chr7 (36-90)||(45976942-45976996)
chr7 (37-98)||(5273610-5273671)
chr7 (20-93)||(7801180-7801253)
chr7 (18-87)||(21877814-21877883)
chr7 (18-94)||(2446307-2446383)
chr7 (18-90)||(15905675-15905746)
chr7 (13-93)||(30442488-30442568)
chr7 (18-94)||(38374600-38374676)
chr7 (18-94)||(38917094-38917169)
chr7 (14-90)||(41519107-41519183)
chr7 (37-93)||(42836021-42836077)
chr7 (18-73)||(8108601-8108656)
chr7 (14-93)||(33328312-33328389)
chr7 (18-88)||(7499925-7499995)
chr7 (17-51)||(11765035-11765069)
chr7 (39-93)||(25956314-25956368)
chr7 (18-68)||(29916809-29916859)
chr7 (61-90)||(4566472-4566501)
chr7 (37-70)||(24418161-24418194)
chr7 (46-87)||(42477097-42477138)
chr7 (60-93)||(45559200-45559233)
chr7 (18-94)||(14058252-14058328)
chr7 (18-94)||(14368280-14368356)
chr7 (7-87)||(21558134-21558214)
chr7 (18-90)||(25241999-25242071)
chr7 (37-97)||(26526286-26526346)
chr7 (18-58)||(37473649-37473689)
chr7 (67-95)||(48256542-48256570)
[»] scaffold0118 (1 HSPs)
scaffold0118 (22-93)||(41638-41709)
[»] chr4 (38 HSPs)
chr4 (18-93)||(46545711-46545786)
chr4 (18-93)||(47044717-47044792)
chr4 (7-93)||(37109341-37109427)
chr4 (14-94)||(21660141-21660221)
chr4 (14-94)||(21668905-21668985)
chr4 (7-93)||(28635696-28635782)
chr4 (18-94)||(51250523-51250599)
chr4 (18-89)||(43623445-43623516)
chr4 (22-93)||(51948480-51948551)
chr4 (8-94)||(7949445-7949531)
chr4 (18-96)||(12798681-12798759)
chr4 (18-93)||(9936962-9937037)
chr4 (22-89)||(13901746-13901813)
chr4 (18-93)||(19238578-19238653)
chr4 (18-93)||(39509070-39509145)
chr4 (18-93)||(55427201-55427276)
chr4 (39-93)||(1730511-1730565)
chr4 (20-98)||(9241028-9241106)
chr4 (44-94)||(27965537-27965587)
chr4 (6-93)||(37274448-37274536)
chr4 (7-93)||(37443702-37443785)
chr4 (18-78)||(38869783-38869843)
chr4 (18-90)||(41346964-41347036)
chr4 (18-90)||(52254405-52254477)
chr4 (18-93)||(19229209-19229283)
chr4 (37-72)||(25869597-25869632)
chr4 (18-93)||(31826609-31826684)
chr4 (18-88)||(3743111-3743181)
chr4 (7-93)||(4249177-4249263)
chr4 (18-72)||(19112929-19112983)
chr4 (18-76)||(30938220-30938278)
chr4 (18-96)||(37720215-37720293)
chr4 (21-94)||(24827824-24827897)
chr4 (60-93)||(45060978-45061011)
chr4 (18-90)||(7292799-7292871)
chr4 (21-93)||(17618281-17618353)
chr4 (39-95)||(29195093-29195149)
chr4 (42-90)||(51346483-51346531)
[»] chr8 (40 HSPs)
chr8 (12-94)||(3826772-3826854)
chr8 (18-94)||(16852339-16852415)
chr8 (18-94)||(19703488-19703564)
chr8 (9-93)||(20994449-20994534)
chr8 (18-93)||(968362-968437)
chr8 (6-93)||(29431011-29431098)
chr8 (7-93)||(18540298-18540384)
chr8 (21-90)||(2792646-2792715)
chr8 (18-91)||(3624582-3624655)
chr8 (8-93)||(6569762-6569847)
chr8 (8-93)||(23361640-23361725)
chr8 (22-94)||(4830486-4830558)
chr8 (39-95)||(17727448-17727504)
chr8 (18-94)||(18897165-18897241)
chr8 (18-94)||(28783059-28783135)
chr8 (18-94)||(35641902-35641978)
chr8 (37-91)||(2203494-2203548)
chr8 (18-92)||(29858050-29858124)
chr8 (18-93)||(14254727-14254799)
chr8 (18-83)||(35035297-35035362)
chr8 (36-93)||(35826311-35826368)
chr8 (8-93)||(43968989-43969074)
chr8 (26-94)||(5264543-5264611)
chr8 (18-94)||(8484998-8485074)
chr8 (18-90)||(18546363-18546435)
chr8 (21-93)||(23874386-23874458)
chr8 (37-93)||(30483904-30483960)
chr8 (18-94)||(44780115-44780191)
chr8 (22-93)||(8059632-8059703)
chr8 (22-93)||(26688865-26688936)
chr8 (8-95)||(35690055-35690142)
chr8 (39-93)||(6530807-6530861)
chr8 (40-94)||(28566104-28566158)
chr8 (40-94)||(28573727-28573781)
chr8 (41-94)||(5801046-5801099)
chr8 (19-96)||(12988425-12988502)
chr8 (7-75)||(6536538-6536606)
chr8 (18-90)||(11492074-11492146)
chr8 (37-93)||(32157191-32157247)
chr8 (37-93)||(35287716-35287772)
[»] chr5 (32 HSPs)
chr5 (7-93)||(29075781-29075867)
chr5 (18-94)||(30109309-30109385)
chr5 (18-98)||(22020863-22020943)
chr5 (22-94)||(43241687-43241759)
chr5 (18-93)||(16773807-16773882)
chr5 (22-93)||(19949621-19949691)
chr5 (18-93)||(21549138-21549213)
chr5 (39-94)||(26598523-26598578)
chr5 (26-93)||(43230783-43230852)
chr5 (8-93)||(25627057-25627142)
chr5 (18-94)||(87424-87500)
chr5 (57-93)||(3252329-3252365)
chr5 (22-93)||(892479-892550)
chr5 (14-93)||(6844729-6844808)
chr5 (7-94)||(14285160-14285247)
chr5 (26-93)||(14495814-14495881)
chr5 (7-94)||(34984805-34984892)
chr5 (8-86)||(1410651-1410728)
chr5 (37-95)||(30735090-30735148)
chr5 (37-94)||(30883218-30883275)
chr5 (18-94)||(16436617-16436692)
chr5 (8-95)||(30700609-30700694)
chr5 (18-82)||(43442207-43442271)
chr5 (14-93)||(8278272-8278351)
chr5 (18-93)||(21589288-21589363)
chr5 (7-93)||(7918459-7918545)
chr5 (37-90)||(18437088-18437141)
chr5 (60-93)||(19043458-19043491)
chr5 (65-94)||(26078099-26078128)
chr5 (37-93)||(16457810-16457866)
chr5 (8-80)||(37258357-37258429)
chr5 (37-93)||(41797832-41797888)
[»] chr6 (23 HSPs)
chr6 (18-95)||(33549102-33549179)
chr6 (37-94)||(12188323-12188380)
chr6 (18-91)||(32613141-32613214)
chr6 (18-87)||(34444809-34444878)
chr6 (18-94)||(10338175-10338251)
chr6 (18-94)||(12234508-12234584)
chr6 (8-90)||(4105051-4105136)
chr6 (18-93)||(24641191-24641266)
chr6 (18-93)||(30127400-30127475)
chr6 (18-93)||(3715452-3715527)
chr6 (18-93)||(12633009-12633084)
chr6 (18-93)||(13227159-13227234)
chr6 (23-94)||(31622997-31623068)
chr6 (14-93)||(32201882-32201961)
chr6 (8-82)||(28363948-28364022)
chr6 (39-93)||(34877095-34877149)
chr6 (61-94)||(13330086-13330119)
chr6 (18-51)||(19162825-19162858)
chr6 (19-76)||(24555736-24555793)
chr6 (38-86)||(3968215-3968263)
chr6 (54-94)||(6663150-6663190)
chr6 (37-89)||(6776627-6776679)
chr6 (36-72)||(31886275-31886311)
[»] scaffold0299 (1 HSPs)
scaffold0299 (8-87)||(11534-11613)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-93)||(15324-15399)
[»] scaffold0211 (1 HSPs)
scaffold0211 (14-93)||(24053-24132)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-90)||(94961-95044)
[»] scaffold0517 (1 HSPs)
scaffold0517 (18-93)||(7727-7802)
[»] scaffold0194 (1 HSPs)
scaffold0194 (18-89)||(13047-13118)
[»] scaffold0070 (2 HSPs)
scaffold0070 (7-93)||(42510-42596)
scaffold0070 (18-90)||(38903-38975)
[»] scaffold0032 (1 HSPs)
scaffold0032 (18-93)||(112282-112357)
[»] scaffold1367 (1 HSPs)
scaffold1367 (18-87)||(841-910)
[»] scaffold0391 (1 HSPs)
scaffold0391 (14-62)||(6575-6623)
[»] scaffold0187 (2 HSPs)
scaffold0187 (37-93)||(12442-12498)
scaffold0187 (37-93)||(22770-22826)
[»] scaffold0126 (1 HSPs)
scaffold0126 (8-76)||(25338-25406)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-86)||(163010-163078)


Alignment Details
Target: chr2 (Bit Score: 139; Significance: 8e-73; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 3001465 - 3001271
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttatacattaatt 106  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  3001465 gcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagttttaaacattaatt 3001366  T
Q  107 ttatcaaacacaattatttcatctactatcaactatatcttataaactaannnnnnnnnnnnnaaagaatatcttataaactatatgtgatcagttagt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||    
T  3001365 ttatcaaacacaattatttcatctactatcaactatatcttataaactaa----ttttcttttaaagaatatcttataaactatatgtgatcagttagt 3001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 34041589 - 34041665
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||| ||||||||| ||  |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  34041589 aatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 4060205 - 4060291
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||| ||| |||||||||||||||||  ||||| |||||||||| || | ||||  ||||||||||||||||||||||||||||||    
T  4060205 caccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgggttt 4060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 35916160 - 35916086
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| |||||||||  ||||||| |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  35916160 atcgaatctgagatcttgaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtgggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 40416380 - 40416466
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| || ||||||||||| ||||  || |  ||||||||||||||||||||||||||||||||||    
T  40416380 gcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 37480150 - 37480074
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||||||||||||||| || || |||| ||||||||| ||||||||||||||||||||    
T  37480150 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 39715067 - 39714991
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||| |||||||||||||||  || || |||||||||||||| | ||||||||||||||||||    
T  39715067 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 42327396 - 42327471
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  42327396 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 19244195 - 19244109
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||   ||||||||||||||| || || ||||||||||||| ||| ||||||||||||||||    
T  19244195 gcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 4438999 - 4439055
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||    
T  4438999 aggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 14500363 - 14500275
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||| ||| ||||||| |||||| ||  |||||||||||||||  ||||||||||   ||||||||||||||| |||||||||||||    
T  14500363 gcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtttt 14500275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29503346 - 29503270
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||||||||||||||  || || |||  ||||||||||||||||||||||||||||||    
T  29503346 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 7799036 - 7799115
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttat 97  Q
    ||||||| |||||||||| |||||||||||||||  |  || |||| ||||||||| ||| |||||||||||||||||||    
T  7799036 aatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggttttat 7799115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 28846769 - 28846691
Alignment:
Q  15 gataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||  || |||||||||||||||  || || |||||||||||||||||  ||||| |||||||||    
T  28846769 gataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 5147702 - 5147755
Alignment:
Q  40 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  5147702 aggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 13803574 - 13803489
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttatac 99  Q
    |||||||||||||||||| ||  ||||||||||||||| ||  ||||||| ||||| ||||||  |||||||| |||||| |||||    
T  13803574 agataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggttatatac 13803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 16918568 - 16918653
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    |||||| ||| |||| ||||| ||| ||  |||||||||||||||  ||||| |||  ||||||||||||||||||||||||||||    
T  16918568 gcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 11738041 - 11738121
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||| |  |  ||||||| |||||||| ||||||| ||||||||||||||  ||||| |||||||||||    
T  11738041 agataatcgaacctgaaactttgaggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggttt 11738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 16381674 - 16381730
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||||    
T  16381674 aggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 29197377 - 29197453
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| |||||  ||||||||||||||||||  |  || |||||||||||||| | ||||||||||||||||||    
T  29197377 aatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 12994377 - 12994452
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| || ||||||||||||||||  || || ||||||||||||||||| ||||| |||| |||||    
T  12994377 aatcgaacttgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 18259801 - 18259730
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||  |||||||||||||||| | |||||||| ||||||||| |||||||| ||| ||||||    
T  18259801 gaacctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24191913 - 24191842
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||||| | |||||||||||||||||||||||||| || || |||| ||||||||  |||||||| ||||||    
T  24191913 aatcgatcatgagatctcaaggaggagcacactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 42860423 - 42860348
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| ||| |||||||||||||||  || ||||||||||||| ||| |||||||| ||||| ||||    
T  42860423 aatcgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 42922501 - 42922414
Alignment:
Q  7 gcaccacagataatcgaacctgagatctca-aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||   |||||||||||||||  || |  |||| |||||||||||||||||||||||||||||    
T  42922501 gcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 42602607 - 42602553
Alignment:
Q  40 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||  || || |||| ||||||||||||||||||||||||||||||    
T  42602607 aggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 21213844 - 21213768
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||||||||||| |||||||  || || |||| ||||||||| || |||||||| | ||||||    
T  21213844 aatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaacccatgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 24144749 - 24144676
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||| | |||||| ||||||  || || |||||||||||||  ||||||| |||||||||||    
T  24144749 aatcgaacctgagatctcgaagaggagtacactc--aggtcccaagtcaataccatcaggccaatccaagtgggtt 24144676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 31573642 - 31573686
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaa 62  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||    
T  31573642 aatcgaacctgagacatcaaggaggagcacactctcagatctcaa 31573686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 38854460 - 38854539
Alignment:
Q  15 gataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||||||| ||  |||||  | ||||||| || ||||||||||| ||||||| |||||| ||| |||||||    
T  38854460 gataatcgaacctgagaccttgaggagaggtacactctcaggtctcaagtcaaaaccactaagccaacacaaatgggttt 38854539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 21939124 - 21939158
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactct 52  Q
    |||||||||||||||||| ||||||||||||||||    
T  21939124 aatcgaacctgagatctcgaggaggagcacactct 21939158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 33582048 - 33582014
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactct 52  Q
    |||||||||||||| ||||||||||||||||||||    
T  33582048 aatcgaacctgagacctcaaggaggagcacactct 33582014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 35710472 - 35710390
Alignment:
Q  12 acagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||| |||||||| ||||| ||||| ||||| ||||||| ||  |||||||||||| |||| ||  |||| |||||||||||    
T  35710472 acagagaatcgaacatgagacctcaaagaggaacacactcctaagtctcaagtcaatcccaccagatcaactcaagtgggttt 35710390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 41908636 - 41908714
Alignment:
Q  15 gataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||| ||||| ||  |||||||||||||||  || ||||||  | | ||||| |||||||||||||||||||    
T  41908636 gataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgggtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 1435148 - 1435064
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||| |||||||| ||||| ||  ||||| ||||||||| || ||| |||| || |||||||| |||||||||||||||||    
T  1435148 caccagagagaatcgaac-tgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 1729872 - 1729815
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||  |  || |||| |||||||||||| |||||||||||||||||    
T  1729872 aggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 7599982 - 7600050
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||||| ||| | ||| ||||||||||||||||||  ||||||| |||| |||| | ||||||||||    
T  7599982 aatcgaacatgaaacctcgaggaggagcacactcttaagtctcaagccaatgccaccaagccaacccaa 7600050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 9318122 - 9318150
Alignment:
Q  65 caataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||||||||||||||    
T  9318122 caataccactaggccaacccaagtgggtt 9318150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 9577907 - 9577843
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    ||||||||||| |  ||||||||||||||  || || ||||||||||||||||  ||||||||||    
T  9577907 gaacctgagatattgaggaggagcacacttctaaatttcaagtcaataccactgtgccaacccaa 9577843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 30808648 - 30808724
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||| |||||| ||  |||||||||| | ||| || ||||||| ||||| ||| || |||||||||||||||||    
T  30808648 aatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcaccagaccaacccaagtgggttt 30808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 32106618 - 32106566
Alignment:
Q  41 ggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||  || || |||||||| ||||| |||||||||||||||||||    
T  32106618 ggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 33962785 - 33962857
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||| | |||||||| |||||||||||||||  || || |||  ||||| || |||||||||||||||||    
T  33962785 aatcgaatccgagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 36042385 - 36042345
Alignment:
Q  54 agatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  36042385 agatctcaagtcaatgtcactaggccaactcaagtgggttt 36042345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 42222956 - 42222876
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 98  Q
    |||||||||| |||  ||||| |||||||||||   | |||||| ||||||||||| | |||||||||| |||| ||||||    
T  42222956 aatcgaacctaagacttcaagaaggagcacacttccatatctcaggtcaataccaccatgccaacccaaatggggtttata 42222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 45672383 - 45672455
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||| ||  ||||||| || ||||  || ||||||| ||| ||||| ||||||||||||||||||||    
T  45672383 gaacctgagacctagaggaggaacatactccaaggtctcaaggcaaaaccacaaggccaacccaagtgggttt 45672455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 51814569 - 51814491
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    |||||||||||||| ||  |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  51814569 aatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtttta 51814491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 52336765 - 52336839
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaac 82  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||  ||||| |||| ||||||||||||||||||    
T  52336765 caccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 19528328 - 19528403
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||  ||||||||||||||| |||||| |||| ||||||||| |||||||||||||||||||    
T  19528328 aatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 25297847 - 25297770
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||| ||||| ||| ||| |||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||    
T  25297847 aatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtttt 25297770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 33700763 - 33700847
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 91  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||  ||||  |||| |||||||||||||||||||||||||||    
T  33700763 gcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 8904500 - 8904413
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||| ||||| ||  |||||||||||||||  | ||| ||||||||||| |||||||||||||||||||||||    
T  8904500 gcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 2799948 - 2799862
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||  |||||||||| | ||||||||||||||| | |||||||||    
T  2799948 gcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 17745247 - 17745328
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    ||||| ||| |||||||| ||||| ||| ||||||||||||| || || || |||| |||||||||||||||||||||||||    
T  17745247 caccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 34460901 - 34460986
Alignment:
Q  9 accacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||| ||||||| ||| |||||| ||  ||||||| |||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  34460901 accagagataattgaatctgagaccttcaggaggaacacacttttaggtctcaagtcaataccactaagccaactcaagtgggttt 34460986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 40257470 - 40257398
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||| ||||| ||| |||||||||||||||  || ||||||| ||||||||| ||||||||||||||||||||    
T  40257470 gaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 8177172 - 8177259
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||||||| | ||  |||||||||||||||  ||||| |||| |||||||||||||||||| ||| |||||||    
T  8177172 gcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 9224850 - 9224779
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||||||||||||| ||||||||| |||| ||||| |||||||||  ||||||||| || ||||||||||||    
T  9224850 aatcgaacctgagacctcaaggagaagcatactctcagatctcaaagcaataccaccagaccaacccaagtg 9224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 24730438 - 24730387
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  24730438 gaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 9165185 - 9165271
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| ||| ||||||||||  |  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  9165185 gcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 15786311 - 15786393
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||| ||| |||||||||||||| ||  |||||||||||||||  ||||| |||| |||||| ||||| |||||||||||||    
T  15786311 caccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 26232402 - 26232464
Alignment:
Q  33 ctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||| ||||||||||||  |||||||||| |||||||||||| ||||||||||||| ||||    
T  26232402 ctcaagcaggagcacactcccagatctcaagccaataccactagaccaacccaagtggatttt 26232464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 29817746 - 29817672
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    |||||||||| ||  | |||||||||||||| || ||||||||||||| ||| ||||||||||||||| ||||||    
T  29817746 gaacctgagaacttgaagaggagcacactctcaggtctcaagtcaatatcaccaggccaacccaagtgagtttta 29817672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 38978968 - 38979018
Alignment:
Q  43 agcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  38978968 agcacactcctaggtctcaagtcaataccactaggccaacccaaatgggtt 38979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 521298 - 521218
Alignment:
Q  13 cagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||||  | |||||||||||||| |  | |||||||||||||| || |||| ||| |||||||||||    
T  521298 cagataatcgaacctgagactttaaggaggagcacacccccaaatctcaagtcaatatcagtaggtcaatccaagtgggtt 521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 17410306 - 17410238
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||||| ||||||||| ||||||| |||||||  ||||| |||  ||||||||||||||||||||||    
T  17410306 aatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 36371545 - 36371469
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||| ||| ||  |||||||||||||||  || |  |||| ||||||||||||||||||||||||||||||    
T  36371545 aatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 42983375 - 42983443
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    ||||||||||  || ||||||||||| |||||||  |||||||||||||||||||| | ||||||||||    
T  42983375 aatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaataccaccatgccaacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 16893469 - 16893394
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||| ||||||  | |||||||| ||||||||  ||| |||||||||||||||    
T  16893469 aatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 37400349 - 37400274
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| || ||||||||||||||| | || ||||||| ||||||||| || ||||||||||| ||||    
T  37400349 aatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 44961840 - 44961765
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| |   |||||||||||||||||| ||||||||  ||||||||  | ||||||||||||||||    
T  44961840 aatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgaccaacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 28411416 - 28411343
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggcca 80  Q
    |||||| ||| ||| ||| |||||| ||||| |||||||||||||| | ||| |||||||||||||| ||||||    
T  28411416 gcaccagagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccaggcca 28411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 30420383 - 30420310
Alignment:
Q  20 tcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||||| |  ||||||||||||||| || ||| |||| ||| |||||| |||||||| |||||||||    
T  30420383 tcgaacctgagatgttgaggaggagcacactcctatatcccaagccaaaaccacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 4566623 - 4566547
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| |   |||||||||||||||  || |  |||| ||||| ||||||||||||||||||||||||    
T  4566623 aatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 13578718 - 13578786
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||||||| |||| | ||||||||||||||||| ||| |  ||||||| |||||||| |||||||||    
T  13578718 aatcgaacctcagattttaaggaggagcacactctcagaccctaagtcaaaaccactagaccaacccaa 13578786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 21547481 - 21547557
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||| | ||| ||||||||||| |||  |  || |||| |||||||||||||||||||||||| |||||    
T  21547481 aatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaacccaagtcggttt 21547557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 31794284 - 31794340
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  |  || |||| |||||||||||||||||||||||||||||    
T  31794284 aggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 7743322 - 7743401
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| ||||| ||  ||||||| |||||||  | ||  | ||| ||||||||||||||||||||||||||||    
T  7743322 agataatcgaacttgagacctagaggaggaccacactcccaaattcctagttaataccactaggccaacccaagtgggtt 7743401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 9117194 - 9117119
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||||||||||||||||||   ||||| |||| | ||||||   ||||||||||| ||||||    
T  9117194 aatcgaacctgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaacccaaatgggtt 9117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 11068852 - 11068919
Alignment:
Q  26 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| |||||| ||||||||||||| | |||| |||||||||||||| ||  |||||||| ||||||    
T  11068852 ctgaggtctcaaagaggagcacactcctggatcccaagtcaataccaccagatcaacccaaatgggtt 11068919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 12259335 - 12259260
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| |||||  || |||||||||||||||  | ||| ||||| |||| ||||| |||||||||||||||||    
T  12259335 aatcgaacttgagacttcgaggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 12587345 - 12587294
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaata 69  Q
    |||||||||||||| ||| |||||||||||||||  ||||| ||||||||||    
T  12587345 aatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 14787337 - 14787408
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||||||||||| | ||  ||||| | |||||||| || ||||||||||||||||||||| |||| ||||||    
T  14787337 aatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaataccactaggtcaactcaagtg 14787408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 16169979 - 16170054
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| | ||  ||||||| |||||||  || || |||||||||||||| |||| ||||||||||||||    
T  16169979 aatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 41508887 - 41508828
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    |||||||||||||||  ||||| |||  || |||||| ||||||||||||||||||||||    
T  41508887 aggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtttta 41508828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 50920039 - 50919972
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccacta 75  Q
    ||||| ||| |||||||||||| | || ||||| ||||||||||| || | |||||||||||||||||    
T  50920039 caccagagagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaataccacta 50919972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 52029938 - 52029993
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccac 73  Q
    |||||||||||||| ||  || |||||||||||| ||| |||||||||||||||||    
T  52029938 aatcgaacctgagaccttgagaaggagcacactcctaggtctcaagtcaataccac 52029993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 1247197 - 1247111
Alignment:
Q  9 accacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||| ||| |||||||||||||| ||  |||||||| ||||||  || | |||| ||| |||||||| ||||||||||||| |||||    
T  1247197 accagagagaatcgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagccaacccaagtgagtttt 1247111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 6650680 - 6650594
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||| ||| ||||||||||||||  |  |||||||||| ||||   |||| |||| ||||||||||||||||||| || |||||||    
T  6650680 caccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 36124899 - 36124853
Alignment:
Q  27 tgagatctcaaggaggagcacactcttagatctcaagtcaataccac 73  Q
    ||||| |||||||||||||||||||| || || ||||||||||||||    
T  36124899 tgagacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 44126450 - 44126396
Alignment:
Q  38 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    ||||||||||||||  || || || ||||||||||| ||||||||||||||||||    
T  44126450 ggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 2074057 - 2074001
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||| || ||||| ||||||||||| || |||||||||||| |||||||    
T  2074057 aggaggagcacacgct-agatcccaagtcaatacaaccaggccaacccaaatgggttt 2074001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 9879517 - 9879448
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacc 83  Q
    ||||||||||| |||||| |||||||| ||| ||||||| ||||| |||| |||||| || | |||||||    
T  9879517 agataatcgaatctgagacctcaaggaagagtacactctcagatcccaagccaatacaaccaagccaacc 9879448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 26232366 - 26232407
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaag 63  Q
    |||||||||| |||||||||||||||||||| ||| ||||||    
T  26232366 gaacctgagacctcaaggaggagcacactctcagacctcaag 26232407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 31049698 - 31049608
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaatacca----ctaggccaacccaagtgggttt 94  Q
    ||||| ||| |||||||  ||||||||  ||||||||||||||| |||||| |||| ||||| ||    ||||||||||| ||||||||||    
T  31049698 caccagagagaatcgaagatgagatctttaggaggagcacactcctagatcccaagccaatatcaatagctaggccaacctaagtgggttt 31049608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 47720886 - 47720837
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    ||||||||||||||| || |||||||||||||||||| ||  ||||||||    
T  47720886 aggaggagcacactcctatatctcaagtcaataccaccagatcaacccaa 47720837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 47727878 - 47727829
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    ||||||||||||||| || |||||||||||||||||| ||  ||||||||    
T  47727878 aggaggagcacactcctatatctcaagtcaataccaccagatcaacccaa 47727829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 6122869 - 6122793
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||||||||||||||  |  || |||| | ||||||||||| |||||||| |||||||    
T  6122869 aatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 11438504 - 11438560
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| |||||||||| ||| |||||||||||||  || ||||| ||||||||||    
T  11438504 aggaggatcacactcttaaatcgcaagtcaataccatcagaccaactcaagtgggtt 11438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 19088265 - 19088213
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||||||| ||| ||| | |||||| | |||||||||||||||||||||||||    
T  19088265 aggaggagtacaatctcaaatctcaggccaataccactaggccaacccaagtg 19088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 50901657 - 50901581
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaat-accactaggccaacccaagtgggtt 93  Q
    |||||||  ||||| ||| ||||||||||||||   || || |||| |||| |||||||||||||||||||||||||    
T  50901657 aatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 51703835 - 51703779
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  ||||  |||| |||||||||||| ||||||||| ||||||    
T  51703835 aggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 5499412 - 5499485
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||| ||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5499412 gaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtttt 5499485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 47454618 - 47454692
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    |||||||||||||| ||| |||||||||||||||  |||||||||| ||||||||||||  ||||||||||||||    
T  47454618 aatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 10499110 - 10499187
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||| |||||||| ||||| ||||  ||||| |||| ||||||||| |||||||||||||||||||||    
T  10499110 aatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtttt 10499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 30311392 - 30311305
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||  ||||| |||| | ||||||||||||||||||| ||||||||    
T  30311392 gcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 37788466 - 37788541
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||  ||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||    
T  37788466 aatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 2597223 - 2597296
Alignment:
Q  20 tcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| ||||||||||||||||||| || |||  ||| ||||||||| || ||||||||||||||||    
T  2597223 tcgaacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 2667941 - 2667869
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||||||||||||||| ||| |||| ||||||||||  ||||| |||| ||||||||| ||||||||||||    
T  2667941 agataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 10445128 - 10445216
Alignment:
Q  6 agcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaa-taccactaggccaacccaagtgggtt 93  Q
    ||||||| ||| |||||||||||||| ||| |||||||||||||||  || || |||| ||| | ||||||||||||||||||||||||    
T  10445128 agcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 19154706 - 19154630
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||||||||||||||| ||  |||||| |||||| ||||||||||||||| |||||||    
T  19154706 aatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaaatgggttt 19154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 203169 - 203090
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| | | || |||||  |||||||||   |||| ||||||||||||||||||||||||||||||||||    
T  203169 agataatcgaacctcaaaccttaaggaaaagcacactccctgatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 9557394 - 9557319
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| |||||| |  |||||| | |||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggttt 9557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 14186722 - 14186648
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  14186722 aatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 15048051 - 15048138
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| |||||||||||||||||| ||  |||||||||||| ||  ||||| |||| | |||||| || ||||||||||||||||||    
T  15048051 gcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 31788967 - 31789046
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| | | ||| |||||||||||||||  ||||| |||| ||||| |||||||||||||||||||||||    
T  31788967 agataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 16354882 - 16354968
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| |   |||||||||||||||  || |  |||| |||||||||||||||||||||||||||||    
T  16354882 gcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 26989051 - 26988994
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  26989051 aggaggagcaaactctcagatc-caagccaataccactaggccaacccaagtgggtttt 26988994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 4222226 - 4222141
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||| |||||||||| |||  |  |||||||||||||||  ||||| |||| ||||||||||| |||||||||||||||||    
T  4222226 caccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 28928899 - 28928952
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||    
T  28928899 aggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 31520606 - 31520683
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||| ||||| ||| ||| |||||||||||||||  ||||| |||| |||| |||| |||||||||||||||||||||    
T  31520606 aatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtttt 31520683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 46518684 - 46518627
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||  ||||| |||| ||||||||||| ||||||||||||||||||    
T  46518684 aggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 4844512 - 4844580
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||| ||||||| ||| |||||||||||||||  ||||| |||||||||||||| || |||||||||    
T  4844512 aatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 4870208 - 4870276
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||| ||||||| ||| |||||||||||||||  ||||| |||||||||||||| || |||||||||    
T  4870208 aatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 11642206 - 11642286
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||||| ||  ||||||| |||| ||| ||||| |||||  |||||| |||||||| ||||||||||||    
T  11642206 agataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagtaggccaatccaagtgggttt 11642286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 27093351 - 27093439
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||| ||| |||| ||||||||| ||  |||||||||||||||  |  |  |||| |||||||||||||||||||||||||||||||    
T  27093351 gcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtttt 27093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 36720456 - 36720380
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||| | ||| |||||||||||||||  | ||| |||| ||||||||| || |||||||||||||||||    
T  36720456 aatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 12761587 - 12761520
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaaccca 85  Q
    |||||||||||||| ||||||||||| |||||||  || || |||||||||||||| || ||||||||    
T  12761587 aatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 35111255 - 35111180
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| ||| |||| ||||||||||  || |||||| ||||| |||||||||||| |||||||||||    
T  35111255 aatcgaacatgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtt 35111180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 40063694 - 40063619
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| || ||||||||||| ||||| ||||| |||| |||||| |||| | |||||||||||||||    
T  40063694 aatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 49494147 - 49494218
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||| ||||||||| ||| |||| ||||||||||  | || |||||||||||||||||||| ||||||||||    
T  49494147 aatcaaacctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtg 49494218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 11612373 - 11612307
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaaccca 85  Q
    ||||||||||||| || ||||||||||||||||  || || ||||| |||||||| |||||||||||    
T  11612373 atcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8368800 - 8368876
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||| ||||||||| ||| |||| |||||||||   || | |||||||||||||||||||||||| ||| |||||||    
T  8368800 aatcaaacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaactcaattgggttt 8368876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 32651439 - 32651503
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaac 82  Q
    ||||||| |||||||||  |||||||||||||||  || || |||| ||||||||||||||||||    
T  32651439 aatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 8170747 - 8170672
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||  || ||||||||||||  |  | ||||| |||||||||||||||||||||| ||||||    
T  8170747 aatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaaatgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 21960626 - 21960551
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| |||||| ||| |||||||||||||||| || || |||| ||||||||| ||  |||||||| ||||||    
T  21960626 aatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 51903879 - 51903954
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| | | |||||||||||||||  ||||| |||| ||||||||  ||| ||||||| |||||||    
T  51903879 aatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 53413031 - 53412948
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||| ||| ||| |||||||||| ||  |||||||||||||||  || |  |||| |||||||||||| |||||||||||||    
T  53413031 gcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 7975474 - 7975416
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||||  ||||| |||| | ||||||||||||||||| || ||||||||    
T  7975474 aggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtttt 7975416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 28703394 - 28703480
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||  | |||||||||||||  ||||| ||||  |||| |||| | ||||||||||||||||    
T  28703394 gcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 42430388 - 42430335
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||  ||||| |||||||||||||| | |||||||||||||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccacca-gccaacccaagtgggtt 42430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 15566629 - 15566702
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| |||  ||||||||| ||||  |||||||||| |||  ||||||||||||||||| |||||||    
T  15566629 aatcgaacctgagacctct-ggaggagcaaactccaagatctcaagccaa--ccactaggccaacccaaatgggttt 15566702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 36459301 - 36459252
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaat 68  Q
    ||||||| |||||||| || ||||| ||||||||||| ||||||||||||    
T  36459301 atcgaacttgagatcttaaagaggatcacactcttaggtctcaagtcaat 36459252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 36797746 - 36797685
Alignment:
Q  34 tcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    ||||||||||||||||||| | || ||||||||||| ||  || |||||||||||| |||||    
T  36797746 tcaaggaggagcacactctcatatttcaagtcaatatcatcagaccaacccaagtgagtttt 36797685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 44743852 - 44743889
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactc 51  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  44743852 agataatcgaacctgagacctcgaggaggagcacactc 44743889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 52769984 - 52770017
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactc 51  Q
    |||||||||||||| |||||||||||||||||||    
T  52769984 aatcgaacctgagacctcaaggaggagcacactc 52770017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 53473425 - 53473368
Alignment:
Q  33 ctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||| | | || ||||||||||||||||||||| ||| ||| ||||||||    
T  53473425 ctcaaggaggagtaaaatcctagatctcaagtcaataccaccaggacaaaccaagtgg 53473368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8051289 - 8051213
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||| ||| ||||| |||| |||   || || |||| ||||||||| ||||||||||||||||||||    
T  8051289 aatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggttt 8051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 8796140 - 8796168
Alignment:
Q  65 caataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||||||||||||||    
T  8796140 caataccactaggccaacccaagtgggtt 8796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 19341857 - 19341801
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  |  ||||||||| ||||||||||| |||||||| ||||||    
T  19341857 aggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtt 19341801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 30510200 - 30510272
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||| || ||||||| |||| ||| || |||| || |||||| ||| ||||||||||||    
T  30510200 aatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 34622567 - 34622599
Alignment:
Q  62 agtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||||| |||||||||||||||||    
T  34622567 agtcaataccactagaccaacccaagtgggttt 34622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 45709705 - 45709785
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||||    
T  45709705 agataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 48772016 - 48771938
Alignment:
Q  15 gataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||||||||| |||||||||||||||||||  ||||| |||| ||||||||| | |||||||||||||||||    
T  48772016 gataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 24513872 - 24513797
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||||||||| || ||||||  | |||||||| |||||||||||||||||||||||||||||    
T  24513872 aatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 26459400 - 26459486
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  26459400 gcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 26199584 - 26199509
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||||| |||||| ||| ||| || || |||| |||||||||||||||||| ||||||||||    
T  26199584 aatcgaacctgagatctcaaagaggagtacattctcaggtcccaagccaataccactaggccaactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 41519268 - 41519335
Alignment:
Q  21 cgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagt 88  Q
    ||||||||||| ||  ||||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  41519268 cgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 2495833 - 2495911
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    ||||||||||||||||||| | ||||||||||||||||  | ||||||||||||||  | ||||||||| |||||||||    
T  2495833 agataatcgaacctgagattttaaggaggagcacactcacaaatctcaagtcaatattattaggccaactcaagtgggt 2495911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 15137638 - 15137553
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||| |||| ||||||||| ||  ||||||||||||||| || ||| ||||||| |||||| |||||||||||||||||||    
T  15137638 caccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 43215259 - 43215182
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||| ||  |||||||||||||||  || || |||| |||||||||||| ||||||||||||||||||    
T  43215259 aatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtttt 43215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 23552193 - 23552117
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||| ||  |||||||||||||||  || || |||||||||| ||||||||||||||||||||||||    
T  23552193 aatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 43663098 - 43663174
Alignment:
Q  20 tcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    |||||||||||||||| ||||||| ||| ||| ||| || |||||||||||||  |||||||||||||||| |||||    
T  43663098 tcgaacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtggatttta 43663174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 18363771 - 18363696
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||| ||||||||| ||  |||||||||||||||  | |||||||| | |||||||||||||||||||||||||||    
T  18363771 aatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 22760938 - 22760863
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||  |||||||||||||||  || || |||||||||||||| || ||||||||||||||||    
T  22760938 aatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 22927532 - 22927477
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    ||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  22927532 aggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 23301603 - 23301678
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||| ||| ||||| |||||||||||||||||||  |  || |||||||||||||| |||||||||||||||||||    
T  23301603 aatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 25590686 - 25590611
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||| |||| ||| |||||||||||||||  |||||||||| ||||||||  ||| |||||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 30579421 - 30579334
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||||||||| ||  |||||| | ||||||  || ||||||| ||||||||| ||||||||||||||||||||    
T  30579421 gcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 23595785 - 23595728
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||  |||||||||||||||||||| || |||||||||||| ||||    
T  23595785 aggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtgagttt 23595728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 17041013 - 17041089
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  ||||||||||||||   ||||| |||| |||| ||||||| |||||||||||||||||    
T  17041013 aatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 25021355 - 25021411
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  25021355 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 25655218 - 25655306
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||| ||| |||||||||||| | ||  ||||||| |||||||  ||||| ||||||||||||||||  |||||||| |||||||||    
T  25655218 gcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtttt 25655306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 35119458 - 35119382
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||| ||||  |||| ||||| || |  ||||| ||||||||||||||||||||||||||| |||||||    
T  35119458 aatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaacccaaatgggttt 35119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 39631919 - 39631839
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 98  Q
    |||||||||||||| ||  |||||||||  ||||  || || |||| ||||||||||||||||||||||||||||| ||||    
T  39631919 aatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttatata 39631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 20335832 - 20335907
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||||||||  |  || |||| ||||||| |||| ||||||||||||||||    
T  20335832 aatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 23945935 - 23945860
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||| ||||| |||||||||| ||| || |   |||||||||||| |||| ||||||||||||||||    
T  23945935 atcgaacctgagacctcaatgaggagcacattctcaggttctaagtcaataccattaggtcaacccaagtgggttt 23945860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 24107341 - 24107298
Alignment:
Q  54 agatctcaagtcaataccactaggccaacccaagtgggttttat 97  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  24107341 agatctcaagtcaatatcactatgccaacccaagtgggttttat 24107298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 39499720 - 39499795
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| || || ||||| |||||||  || || |||| |||||||||||||||||||||||||||||    
T  39499720 aatcgaacatgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 18011356 - 18011426
Alignment:
Q  24 acctgagatctcaaggaggagcacactcttagatctcaagtcaa-taccactaggccaacccaagtgggtt 93  Q
    |||||||| |||| ||||||||||||||| || ||||||| ||| ||||| ||||||||||||| ||||||    
T  18011356 acctgagacctcatggaggagcacactctcaggtctcaagccaattaccattaggccaacccaactgggtt 18011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 31835270 - 31835192
Alignment:
Q  15 gataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||||||||| ||  |||||||||||||||  ||  | |||| ||| ||||| |||||||||||||||||||    
T  31835270 gataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 33869436 - 33869526
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 98  Q
    ||||| ||| ||||||||| |||| ||  || |||||||||||   || ||||||| |||||| |||||||||||||||||||||| ||||    
T  33869436 caccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggttatata 33869526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 35513541 - 35513467
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    |||||||| |||||| || |||||||||||||||| |  || ||||  ||||||||||||||||||||| |||||    
T  35513541 aatcgaacatgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggccaacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 45976942 - 45976996
Alignment:
Q  36 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||  || || |||| ||||||||||||||||||||||||||    
T  45976942 aaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 5273610 - 5273671
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 98  Q
    |||||||||||||||| || || |||| ||| ||||| ||||||||||||||||||| ||||    
T  5273610 aggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggttctata 5273671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 7801253 - 7801180
Alignment:
Q  20 tcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| ||  | |||||||||||||  || || |||||||||||||| ||||||| |||||||||||    
T  7801253 tcgaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 21877883 - 21877814
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 87  Q
    |||||||| ||||| || |||||||||||| |||  || || ||||||||||||||||||||||| ||||    
T  21877883 aatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 2446383 - 2446307
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||||||| |||||||||||||||  |  || |||| ||||||||  || |||||||||||||||||    
T  2446383 aatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15905675 - 15905746
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| || ||||||||||||||||  || || |||| ||||||| | ||||||||||||||||    
T  15905675 aatcgaacctgagacct-aaggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 30442568 - 30442488
Alignment:
Q  13 cagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||| |||||||||| ||| ||  |||||||||| ||||  || || |||| |||||||||| ||||||||||||||||||    
T  30442568 cagagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 38374600 - 38374676
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||| ||| ||  |||||||||||||||| || || |||| ||| ||||| | ||||||||||||||||||    
T  38374600 aatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 38917169 - 38917094
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| |||||  |||||||| |||||| ||| || |||||||| ||||||||||| ||||| |||||||||||    
T  38917169 aatcgaacttgagacttcaaggagaagcacattctaag-tctcaagttaataccactagaccaactcaagtgggttt 38917094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 41519107 - 41519183
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||| |||||| ||  || ||||||||||||||| ||| |||| || || ||||||||||||| ||||||    
T  41519107 agataatcgaatctgagaccttgagaaggagcacactcttaaatcccaagccagtatcactaggccaaccaaagtgg 41519183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 42836021 - 42836077
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||| ||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  42836021 aggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 8108656 - 8108601
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccac 73  Q
    |||||||||||||| ||||||||||||| |||||  | ||| ||||||||||||||    
T  8108656 aatcgaacctgagacctcaaggaggagcgcactcccatatcccaagtcaataccac 8108601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 33328312 - 33328389
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||||||| | |||||||| ||||  |||||||| |||| ||| |||||||| |||| ||||||||    
T  33328312 agataatcgaacctgagatctcgaagaggagcatactc-cagatctcacgtcagtacgactaggcc-acccgagtgggtt 33328389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 7499925 - 7499995
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagt 88  Q
    |||||||||||||| ||| | |||||||| ||||| || || |||| ||||| |||||||| |||||||||    
T  7499925 aatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcactaggctaacccaagt 7499995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 11765035 - 11765069
Alignment:
Q  17 taatcgaacctgagatctcaaggaggagcacactc 51  Q
    |||||||| ||||||||||||||||||||||||||    
T  11765035 taatcgaatctgagatctcaaggaggagcacactc 11765069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 25956314 - 25956368
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||  || || |||| |||||||||||||||||||||| ||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 29916809 - 29916859
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaat 68  Q
    |||||||||||||| ||  |||||||||||||||||||||| || ||||||    
T  29916809 aatcgaacctgagaccttgaggaggagcacactcttagatcccacgtcaat 29916859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 4566472 - 4566501
Alignment:
Q  61 aagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||||||||||||||||||    
T  4566472 aagtcaataccactaggccaacccaagtgg 4566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 24418161 - 24418194
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaatac 70  Q
    ||||||||||||||||||| ||||||||||||||    
T  24418161 aggaggagcacactcttaggtctcaagtcaatac 24418194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 42477097 - 42477138
Alignment:
Q  46 acactcttagatctcaagtcaataccactaggccaacccaag 87  Q
    ||||| |||| |||||||||||||||||||| ||||||||||    
T  42477097 acacttttaggtctcaagtcaataccactagaccaacccaag 42477138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 45559233 - 45559200
Alignment:
Q  60 caagtcaataccactaggccaacccaagtgggtt 93  Q
    |||| |||||||||||||||||||||||||||||    
T  45559233 caagccaataccactaggccaacccaagtgggtt 45559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14058328 - 14058252
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||| ||||||||||| || |  |||| ||||||||| |||||||| |||| ||||||    
T  14058328 aatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttt 14058252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14368356 - 14368280
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||| ||||||||||| || |  |||| ||||||||| |||||||| |||| ||||||    
T  14368356 aatcgaacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggttt 14368280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 21558214 - 21558134
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 87  Q
    |||||| ||| |||||||||||||| ||  |||||||||||| |||||| |  ||||||||||| || | |||||| ||||    
T  21558214 gcaccagagagaatcgaacctgagaccttgaggaggagcacattcttaggttccaagtcaatactaccaagccaacacaag 21558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 25242071 - 25241999
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||| |||||| ||| |||||||||| ||||| ||||||||||  | |||||| ||  ||||||||||||    
T  25242071 aatcgaatctgagacctcgaggaggagcatactctcagatctcaagatattaccaccagatcaacccaagtgg 25241999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 26526346 - 26526286
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttat 97  Q
    |||||||||||||||| | |||  ||||||||||||| || |||| |||| ||||||||||    
T  26526346 aggaggagcacactctcaaatcctaagtcaataccaccagaccaatccaaatgggttttat 26526286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 37473689 - 37473649
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatc 58  Q
    |||||||||||||| |||||||||||||| |||| ||||||    
T  37473689 aatcgaacctgagacctcaaggaggagcaaactcctagatc 37473649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 48256542 - 48256570
Alignment:
Q  67 ataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||||||||||||||||||    
T  48256542 ataccactaggccaacccaagtgggtttt 48256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 41638 - 41709
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||| |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  41638 gaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 46545786 - 46545711
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| |||||||||  |||||||||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  46545786 aatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 47044792 - 47044717
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||    
T  47044792 aatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 37109341 - 37109427
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  37109341 gcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21660141 - 21660221
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||| ||||| ||| |||| ||||||||||  |||||||||||||||||||| || ||||||||||| |||||    
T  21660141 agataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21668905 - 21668985
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||| ||||| ||| |||| ||||||||||  |||||||||||||||||||| || ||||||||||| |||||    
T  21668905 agataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 28635782 - 28635696
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||| ||| ||| |||||||||||||||  ||||| ||||||| |||||| ||| |||||||||||||||    
T  28635782 gcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 51250523 - 51250599
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||||||  ||| |||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||    
T  51250523 aatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 43623445 - 43623516
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    ||||||||||||||  ||||||||||||||||||   ||||||||||||||| |||||| | ||||||||||    
T  43623445 aatcgaacctgagacttcaaggaggagcacactccctgatctcaagtcaatatcactagactaacccaagtg 43623516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 51948551 - 51948480
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||| |||||| |||||||| |||||| ||||||||||| || ||| |||||||||||||||    
T  51948551 gaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 7949445 - 7949531
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||| ||| |||||||||||||| ||  |||||||||||||||  || || |||| ||||||| |||||||| |||||||||||||    
T  7949445 caccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 12798759 - 12798681
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    |||||||||||| | ||| ||||| |||||||||  |||||||||  |||||||||| || ||||||||||||||||||    
T  12798759 aatcgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtttta 12798681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 9936962 - 9937037
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| |  || |||||||||||||||  |  ||||||||| |||||||||||||||||||||| ||||    
T  9936962 aatcgaacctgaaacttcgaggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtt 9937037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 13901813 - 13901746
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||| ||||| ||||||||||| |||||||  || ||||||| |||||||||||| ||||||||||||    
T  13901813 gaacttgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 19238578 - 19238653
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||| |||| ||| |||||||||||||||  |  || |||| ||||||||| |||||||||||||||||||    
T  19238578 aatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 39509145 - 39509070
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||||||||  ||||| |||| || |||||  || ||||||||||||||||    
T  39509145 aatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 55427201 - 55427276
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| || ||||||| ||||  || || |||| ||||||||| |||||||||||||||||||    
T  55427201 aatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 1730511 - 1730565
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| || || |||| ||||||||||||| |||||||||||||||    
T  1730511 gaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 9241028 - 9241106
Alignment:
Q  20 tcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 98  Q
    |||||||| ||| ||| || |||||||||||   ||||| |||| ||||||||| ||||||||||||||||||| ||||    
T  9241028 tcgaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttatata 9241106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  44 gcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 37274448 - 37274536
Alignment:
Q  6 agcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaa-taccactaggccaacccaagtgggtt 93  Q
    ||||||| ||| |||||||||| ||| ||  |||||||||||||||  || || |||| ||| ||| ||||||||||||||||||||||    
T  37274448 agcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 37443785 - 37443702
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| |||||||||||| ||| | |||   |||||| ||||||  ||||| |||| ||||||||||||| |||||||||||||||    
T  37443785 gcaccagagataatcgaacatgaaacctc---gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 38869843 - 38869783
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggc 78  Q
    |||||||||||||| ||  |||||||||||||||  ||||| |||| ||||||||||||||    
T  38869843 aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 41346964 - 41347036
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||  || |||||||||| ||||  |||||||||  ||||||||  ||||||||||||||||    
T  41346964 aatcgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 52254405 - 52254477
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||| ||||||| | |||||||||||||||||||| | ||| |||||||||||||  || ||||| |||||||    
T  52254405 aatctaacctgaaacctcaaggaggagcacactctcatatcccaagtcaataccatcagaccaactcaagtgg 52254477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 19229209 - 19229283
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||||| ||| || || || | ||||||||| |||||||||||| ||||||    
T  19229209 aatcgaacctgagacctcgaggaggagcacattctaag-tcccaggccaataccaccaggccaacccaaatgggtt 19229283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 25869597 - 25869632
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaatacca 72  Q
    |||||||||||||||| |||||||||||||||||||    
T  25869597 aggaggagcacactctcagatctcaagtcaatacca 25869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 31826684 - 31826609
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| ||  |||||||||||||||  | ||| |||| | ||||||||||| |||||||||||||||    
T  31826684 aatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 3743111 - 3743181
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagt 88  Q
    ||||||| || ||||||  ||||||| |||||||||||||| |||||||||| ||| || |||||| ||||    
T  3743111 aatcgaatctaagatcttgaggaggaacacactcttagatcccaagtcaatatcaccagaccaaccgaagt 3743181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 4249263 - 4249177
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||| ||||||||| ||  |||||||||||||||  | ||| |||| | ||||||||||||||| | |||||||||    
T  4249263 gcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19112983 - 19112929
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaatacca 72  Q
    |||||||||||| | ||| | ||||||||||||| ||| ||||||||||||||||    
T  19112983 aatcgaacctgataactcgaagaggagcacactcctaggtctcaagtcaatacca 19112929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 30938220 - 30938278
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactag 76  Q
    |||||||||||||| ||| |||||||||||||||  ||||| |||  ||||||||||||    
T  30938220 aatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 37720215 - 37720293
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    ||||||||||| || ||  |||||| ||||||||  || || |||| ||||| ||| ||||||||||||||||||||||    
T  37720215 aatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtttta 37720293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 24827897 - 24827824
Alignment:
Q  21 cgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||| ||| ||||||||| |||||  || || ||||||||||||||  | |||||| ||||||||||    
T  24827897 cgaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggttt 24827824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 45061011 - 45060978
Alignment:
Q  60 caagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||| |||||||||||||||    
T  45061011 caagtcaataccactaggtcaacccaagtgggtt 45060978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 7292799 - 7292871
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||  |  |||||||||||||||  || |  |||| |||||||||||| |||||||||||||    
T  7292799 aatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 17618353 - 17618281
Alignment:
Q  21 cgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||||| ||| |||||||||||||||  || ||||||| ||||||||| | |||  ||||||||||||    
T  17618353 cgaacatgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 29195149 - 29195093
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||  || || |||| ||| ||||| |||||||||||||||||||||    
T  29195149 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtttt 29195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 51346483 - 51346531
Alignment:
Q  42 gagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||| | ||||||||||||||||   ||||||||||||||||    
T  51346483 gagcacactctcaaatctcaagtcaataccgtcaggccaacccaagtgg 51346531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 3826772 - 3826854
Alignment:
Q  12 acagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||| ||||||||||||||||||  ||||||||||||||| | ||  |||| ||||||||||||||||||||||||||||||    
T  3826772 acagagaatcgaacctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttt 3826854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16852415 - 16852339
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||||||    
T  16852415 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 19703488 - 19703564
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  |||||||||||||||| || || |||| ||||||||||||||||||||||||||||||    
T  19703488 aatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 20994449 - 20994534
Alignment:
Q  9 accacagataatcgaacctgaga-tctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||| |||||||||| ||||||| | | | ||||||||||||||  || || ||||||||||||||||||||||||||||||||||    
T  20994449 accagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 968437 - 968362
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||||||||  || || |||| ||||||||| |||||||| ||||||||||    
T  968437 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 29431098 - 29431011
Alignment:
Q  6 agcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| ||| |||||||||||||  |||||||||||||||||||  |  || |||| ||||||| | |||||||||||||||||||    
T  29431098 agcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 18540384 - 18540298
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| ||  ||||| || ||||||  || || |||| |||||||||||||||||||||||||||||    
T  18540384 gcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 2792715 - 2792646
Alignment:
Q  21 cgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    ||||||||||||||  ||||||| || ||||| |||||||||||||| |||| ||||||||| |||||||    
T  2792715 cgaacctgagatctagaggaggaacatactctcagatctcaagtcaaaaccattaggccaactcaagtgg 2792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3624655 - 3624582
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 91  Q
    |||||||||||||| ||  | |||||||||||||  || || |||| |||||||||||||||||||||||||||    
T  3624655 aatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 6569762 - 6569847
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||| |||||||| ||| | || ||||||||||||||||  ||||| |||| ||||| ||||||||||||| |||||||||    
T  6569762 caccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 23361640 - 23361725
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||| ||| |||||||||| ||  |||||||||||||||  | ||| |||||||||||||| ||| |||||||||||||||    
T  23361640 caccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 4830558 - 4830486
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||| ||| ||||||| |||||||| ||||| |||   |||||||| ||||||||||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 17727448 - 17727504
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||| || ||||||||||| ||||| || ||||||||||||||||||    
T  17727448 gaggagcacactctgaggtctcaagtcaacaccacgagaccaacccaagtgggtttt 17727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 18897241 - 18897165
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||| ||  |||||||||||||||| || || |||  ||| ||||||||||||||||||||||||||    
T  18897241 aatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggttt 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 28783135 - 28783059
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||| ||  |||||||||||||||  || ||||||| ||||||||| | ||||||||||||||||||    
T  28783135 aatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 35641902 - 35641978
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||||  || |||||||||||||||  | |||||||| | ||||||| || |||||||||||||||||    
T  35641902 aatcgaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttt 35641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 2203548 - 2203494
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 91  Q
    |||||||||||||||  || || |||| |||||||||||||||||||||||||||    
T  2203548 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 29858050 - 29858124
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 92  Q
    |||||||||||||| ||| |||||||||||||||   | || |||| ||||||||| ||||||| ||||||||||    
T  29858050 aatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 14254799 - 14254727
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| |||||||||||||||   |||||||  |||||||||  |||||| |||||| |||||||||||||||    
T  14254799 aatcgaacatgagatctcaaggag---cacactcccagatctcaaaccaatacaactaggtcaacccaagtgggtt 14254727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 35035362 - 35035297
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacc 83  Q
    |||| ||| ||||| ||||| |||||||||||| |||||||||||| ||||||||  |||||||||    
T  35035362 aatctaacatgagacctcaaagaggagcacacttttagatctcaagccaataccaacaggccaacc 35035297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 35826368 - 35826311
Alignment:
Q  36 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||||||||  || ||||||| || ||||||||||||||||||| ||||||    
T  35826368 aaggaggagcacactcacaggtctcaagccactaccactaggccaacccaattgggtt 35826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 43968989 - 43969074
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||||||||||| |||||| |||| |||||||||||||| ||   | |||| ||||||||  | |||||||||||||||||    
T  43968989 caccagagataatcgaatctgagacctcagggaggagcacactcctaagccccaagccaataccatcatgccaacccaagtgggtt 43969074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 5264611 - 5264543
Alignment:
Q  26 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||||||| ||  || |  |||| ||||||||||||||||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8485074 - 8484998
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||  ||||| ||||| |||||||||||||  || || ||||  |||||||| ||||||||||||||||||||    
T  8485074 aatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 18546363 - 18546435
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||||| ||| ||||||||||  |||| || || ||| ||||||||||||| |||||| ||||||    
T  18546363 aatcgaacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacctaagtgg 18546435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 23874386 - 23874458
Alignment:
Q  21 cgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||| ||| |||||| ||| | ||  || || |||| |||||||||||||||||||||||||||||    
T  23874386 cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 30483904 - 30483960
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  | ||| |||| |||||||||| ||||||||||||||||||    
T  30483904 aggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 44780115 - 44780191
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||| ||||||||| ||  |||||||||||||||  |  || |||| |||| |||||||||||||||||||||||||    
T  44780115 aatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 8059703 - 8059632
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||  ||||||| |||||||| | ||  |||||||||||||  |||||||||||||||||||    
T  8059703 gaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 26688936 - 26688865
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||  |||||||||||||||  || || |||| ||| ||||| |||||||||||||||||||    
T  26688936 gaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 35690055 - 35690142
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    ||||| ||| |||||||||||||| ||  |||||||||| || |  ||||| |||| |||||||||||||||||| ||| ||| ||||    
T  35690055 caccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaacacaaatggatttt 35690142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 6530861 - 6530807
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||||| ||| || |||| ||| ||||| |||||||||||||||||||    
T  6530861 gaggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 28566158 - 28566104
Alignment:
Q  40 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||| || || |||  ||||||||||||| ||||||||||||||||    
T  28566158 aggagcacactctaaggtcccaaaccaataccactaggtcaacccaagtgggttt 28566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 28573781 - 28573727
Alignment:
Q  40 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||| || || |||  ||||||||||||| ||||||||||||||||    
T  28573781 aggagcacactctaaggtcccaaaccaataccactaggtcaacccaagtgggttt 28573727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 5801099 - 5801046
Alignment:
Q  41 ggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||| |||||| ||||  |||||||| ||| ||||||||||||||||    
T  5801099 ggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 12988502 - 12988425
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 96  Q
    ||||||||||| | ||  ||||||||||||||   || |  |||| ||||||||||||||||| ||||||||||||||    
T  12988502 atcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaatccaagtgggtttta 12988425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 6536606 - 6536538
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccacta 75  Q
    |||||| ||| ||| |||||||||| ||  ||||||||||||||| ||| || |||| |||||||||||    
T  6536606 gcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 11492074 - 11492146
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||| ||| ||| || ||||||||||||  |||||||||| |||||||   | ||||||||||||||    
T  11492074 aatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccgacatgccaacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 32157247 - 32157191
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||||  || || |||||||||||||| |||||||||||| ||||||    
T  32157247 aggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 35287772 - 35287716
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  | |||||||| ||| ||||| ||||| |||||||||||||    
T  35287772 aggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtt 35287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 29075867 - 29075781
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||| ||||||||| |||||||||||||||  ||||| |||| |||||||||||||| ||||||||||||||    
T  29075867 gcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 30109309 - 30109385
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| |||||||||||||||||||  || || |||| ||||||||| | ||||||||||||||||||    
T  30109309 aatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 22020863 - 22020943
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 98  Q
    ||||||| ||||||  ||||||||||||||||||  ||||| ||||  |||||||||| ||||||||||| ||||||||||    
T  22020863 aatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaagagggttttata 22020943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 43241687 - 43241759
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||| |||||||| | ||||||||  ||||| ||||||||||||||||| |||||||||||| ||||    
T  43241687 gaacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtgagttt 43241759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 16773882 - 16773807
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||||||||  || || |||||||||||||| || ||||| ||||||||||    
T  16773882 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 19949621 - 19949691
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||| | | |||||||||| ||||    
T  19949621 gaacctgagagctcgaggaggagcacactct-agatctcaagtcaataccaccaagtcaacccaagtaggtt 19949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 21549138 - 21549213
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| |||||  | ||||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  21549138 aatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 26598578 - 26598523
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 43230783 - 43230852
Alignment:
Q  26 ctgagatctcaaggaggagcacactcttagatctcaagtcaata--ccactaggccaacccaagtgggtt 93  Q
    ||||||||| ||||||||||||||||| ||| | |||| |||||  ||||||||||||||||||||||||    
T  43230783 ctgagatcttaaggaggagcacactctcagaacccaagccaatataccactaggccaacccaagtgggtt 43230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 25627142 - 25627057
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||| ||| |||||||||||||| ||  |||||||||||||||  |  |  |||| |||||||||||||||||||||||||||||    
T  25627142 caccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 87424 - 87500
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||| ||||||||| ||  |||||||||||||||  ||||  |||| ||||||||||||||||||| ||||||||||    
T  87424 aatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 3252329 - 3252365
Alignment:
Q  57 tctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||||||||||||||||||||||||    
T  3252329 tctcaagtcaataccactaggccaacccaagtgggtt 3252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 892479 - 892550
Alignment:
Q  22 gaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||  |||||||| ||||||| || || |||| |||||||||||||||||||||| ||||||    
T  892479 gaacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 6844808 - 6844729
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| ||| ||||||| |||||||  | ||  ||||||||||||||  ||||||||||||||||||    
T  6844808 agataatcgaaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaacccaagtgggtt 6844729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 14285247 - 14285160
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||||||||| ||  |||||||||||||||  || |  |||| |||| ||||| |||||||||||||||||||    
T  14285247 gcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggttt 14285160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 14495814 - 14495881
Alignment:
Q  26 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||||  ||||| |||||||||||||| || ||||||||| ||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 34984892 - 34984805
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||| ||| |||||||||| ||| ||  |||||||||||||||  || |  |||| |||||||||||| |||||||||||||||||    
T  34984892 gcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 1410651 - 1410728
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    ||||||||| |||||||| ||||| ||| |||||||||||||||  | ||| |||||||||||||| || |||||||||    
T  1410651 caccacagagaatcgaac-tgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 30735090 - 30735148
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||||| || |  ||||||||||| |||||| |||||||||||||||||    
T  30735090 aggaggagcacactctcaggttacaagtcaatacgactaggtcaacccaagtgggtttt 30735148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 30883218 - 30883275
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||  || || |||| |||||||||||| |||||||||||||||||    
T  30883218 aggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16436692 - 16436617
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||| ||||| ||  |||||||||||||||  || || |||| ||||||||||||||||||||||||| ||||    
T  16436692 aatcgaacatgagaccttgaggaggagcacactccaag-tcccaagccaataccactaggccaacccaagtgagttt 16436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 30700609 - 30700694
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    ||||| ||||||| |||||||||| || ||| |||||||| |||  || |  ||||||||||| |||||||||||| |||||||||||    
T  30700609 caccagagataattgaacctgagaccttaagaaggagcactctc--aggttacaagtcaatacgactaggccaacctaagtgggtttt 30700694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 43442271 - 43442207
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaac 82  Q
    |||||||||||||| ||  |||||||||||||||  |||||||||  ||||||||||| ||||||    
T  43442271 aatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 8278272 - 8278351
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||| ||||||||| |||||||||||||||  |  || |||| ||||||||  || ||||||||||||||||    
T  8278272 agataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 21589363 - 21589288
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||||||||||  || ||||| |||| ||||  || || |||| ||||||||| |||||||||||||||||||    
T  21589363 aatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 7918459 - 7918545
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||| ||| ||  ||||||||  |||||  || |  |||| |||||||||||||||||||||||||||||    
T  7918459 gcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 18437141 - 18437088
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||||||||||| |  || ||||| |||||||||||||||||| ||||||    
T  18437141 aggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 19043491 - 19043458
Alignment:
Q  60 caagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| |||||||||||||||||||||||    
T  19043491 caagtcaatagcactaggccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 94
Target Start/End: Original strand, 26078099 - 26078128
Alignment:
Q  65 caataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||||||||||||||||||||    
T  26078099 caataccactaggccaacccaagtgggttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 16457866 - 16457810
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||  || || |||| ||||||||| ||||||||| |||||||||    
T  16457866 aggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 37258357 - 37258429
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggcca 80  Q
    ||||| ||| |||||||||||| | ||  ||||||||||||||| |||||| ||||  |||||||||| ||||    
T  37258357 caccagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaataccactaagcca 37258429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 41797832 - 41797888
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| ||| |||||||||| |||||| | ||| |||||| |||||||||    
T  41797832 aggaggagcacattctcagatctcaagccaatacaattagaccaaccaaagtgggtt 41797888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 33549179 - 33549102
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 95  Q
    |||||||||||||| ||| |||||||||||||||  || || |||| ||||||||| || ||||||||||||||||||    
T  33549179 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtttt 33549102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 12188323 - 12188380
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||||  || || |||| ||||||||||||||||||||||||||||||    
T  12188323 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 32613141 - 32613214
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 91  Q
    |||||||| ||||||||  || ||||||||||||  ||| | |||||||||||||| |||||||||||||||||    
T  32613141 aatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 34444878 - 34444809
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 87  Q
    |||||||||||||| ||   ||||||||||||||| || || |||||||||||||| |||||||||||||    
T  34444878 aatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 10338175 - 10338251
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||  ||||||||||||||| ||| || |||| ||||||||| | ||||||||||||| ||||    
T  10338175 aatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 12234508 - 12234584
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||||||| ||| ||  |||||||||||  || || |||||||||||||| ||||||||| ||||||||||    
T  12234508 aatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 4105136 - 4105051
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtc---aataccactaggccaacccaagtgg 90  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||| ||| | ||||| |   ||||||||||| ||||| |||||||    
T  4105136 caccagagaaaatcgaacctgagatcttaaggaggagcacactcctaggtttcaagccaataataccactagaccaactcaagtgg 4105051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 24641191 - 24641266
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| | | ||| |||||||||||||||  ||||| |||||||||||||| | |||||||||| ||||||    
T  24641191 aatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 30127475 - 30127400
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| | |||||||||||||  ||| | |||| ||||||||| || ||||||||||||||||    
T  30127475 aatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 3715527 - 3715452
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| ||| | ||| |||| ||||  ||||||||||||||||||||||| |||||| || ||||||    
T  3715527 aatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactagcccaaccaaaatgggtt 3715452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 12633084 - 12633009
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||||||| | |||||||||||||  | ||| |||||||||| |||  || |||||||||||||||    
T  12633084 aatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccgggacaacccaagtgggtt 12633009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 13227159 - 13227234
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| |||||  || |||||||||||||||  ||||||||   |||||||||  ||||||||||||||||||    
T  13227159 aatcgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 31622997 - 31623068
Alignment:
Q  23 aacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||| ||| |||||||||||||||  || || |||| |||||||||  | |||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 32201882 - 32201961
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||| ||| |  | ||||||||||||||||| ||||| |||| ||||||||| | | |||||||| ||||||    
T  32201882 agataatcgaacttgaaacttaaaggaggagcacactctgagatcccaagccaataccaccaagtcaacccaaatgggtt 32201961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 28364022 - 28363948
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaac 82  Q
    ||||| ||||||||||| |||||| ||  |||||||||||||||  ||||| |||  ||||||||||| ||||||    
T  28364022 caccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaataccactatgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 34877095 - 34877149
Alignment:
Q  39 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| | | |||||  ||||| |||||||||||||||||||||||||||    
T  34877095 gaggagcacattttcagatcctaagtctataccactaggccaacccaagtgggtt 34877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 13330119 - 13330086
Alignment:
Q  61 aagtcaataccactaggccaacccaagtgggttt 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  13330119 aagtcaataccactaggtcaacccaagtgggttt 13330086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 19162858 - 19162825
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactc 51  Q
    |||||||||||||||||| |||||||||||||||    
T  19162858 aatcgaacctgagatctcgaggaggagcacactc 19162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24555793 - 24555736
Alignment:
Q  19 atcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactag 76  Q
    ||||||||||||||||  |||||||||| ||||  |||||||||  ||||||||||||    
T  24555793 atcgaacctgagatcttgaggaggagcatactccgagatctcaaaccaataccactag 24555736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 3968215 - 3968263
Alignment:
Q  38 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    ||||||||||||||| |  |||||||||||||||| ||| |||||||||    
T  3968215 ggaggagcacactctaaagtctcaagtcaataccaatagaccaacccaa 3968263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 6663150 - 6663190
Alignment:
Q  54 agatctcaagtcaataccactaggccaacccaagtgggttt 94  Q
    |||||||||| ||||||||||| ||||||||||||| ||||    
T  6663150 agatctcaagccaataccactatgccaacccaagtgtgttt 6663190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 6776627 - 6776679
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    ||||||||||||| |  ||||| |||| ||||||||| |||||||||||||||    
T  6776627 aggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 31886311 - 31886275
Alignment:
Q  36 aaggaggagcacactcttagatctcaagtcaatacca 72  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  31886311 aaggaggagcacactattagatcacaagtcaatacca 31886275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 11613 - 11534
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 87  Q
    ||||| ||| |||||||||||||| ||| |||||||||||||||  ||||| |||| ||||||||| |||||| ||||||    
T  11613 caccagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 15324 - 15399
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||| ||| |||||||||||||||  || || |||| ||||||||| || ||||||||||||||||    
T  15324 aatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 24132 - 24053
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||||||||| |  || | ||||||||||||| ||  || ||||||||||||| ||||||||||||||||||||    
T  24132 agataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattaggccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 94961 - 95044
Alignment:
Q  7 gcaccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||| ||||||| |||||||||| ||  |||||||||||||||  || |  |||| ||||||||||||||||||||||||||    
T  94961 gcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7727 - 7802
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||| ||||| || ||||||||||||||| | || ||||||| ||||||||| || ||||||||||| ||||    
T  7727 aatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 13047 - 13118
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 89  Q
    |||||||||||||| ||  |||||||||||||||  |||||||||| ||||||||| | ||||||| |||||    
T  13047 aatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 42510 - 42596
Alignment:
Q  7 gcaccacagataatcgaacctgagatctca-aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||| ||| |||||||||||||| |||  |||||||||| ||||  ||||  ||||||||||||||||||||||||||| ||||||    
T  42510 gcaccaaagagaatcgaacctgaga-ctctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 38903 - 38975
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 90  Q
    |||||||| |||||||| || || ||||| |||| ||| || |||| ||||||||| || |||||||||||||    
T  38903 aatcgaacgtgagatcttaaagatgagcatactcctaggtcccaagccaataccaccagaccaacccaagtgg 38975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 112357 - 112282
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    |||||||||| ||| ||||| ||||| |||||||  ||||  |||| |||||| || |||||||||||||||||||    
T  112357 aatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 841 - 910
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 87  Q
    ||||||||||||||  || |||||||||||| ||  ||||| |||| ||||||||| |||||| ||||||    
T  841 aatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 6575 - 6623
Alignment:
Q  14 agataatcgaacctgagatctcaaggaggagcacactcttagatctcaa 62  Q
    |||||||||||||||| |  ||||| ||||||||||||||| |||||||    
T  6575 agataatcgaacctgaaacttcaagaaggagcacactcttaaatctcaa 6623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 12442 - 12498
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| |||||| | || | ||||||||||||||| |||||||||||| ||||||    
T  12442 aggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtt 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 22770 - 22826
Alignment:
Q  37 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 93  Q
    ||||||| |||||| | || | ||||||||||||||| |||||||||||| ||||||    
T  22770 aggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtt 22826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 25338 - 25406
Alignment:
Q  8 caccacagataatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactag 76  Q
    ||||| |||||||||||||||||| ||  || ||||||||||||  |  ||||||| ||||||||||||    
T  25338 caccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaataccactag 25406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 163010 - 163078
Alignment:
Q  18 aatcgaacctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 86  Q
    |||||||||| ||| || | ||||||||||||||| || ||  ||||||| |||||||| |||||||||    
T  163010 aatcgaacctcagaccttatggaggagcacactctcaggtcataagtcaaaaccactagaccaacccaa 163078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University