View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1204_high_94 (Length: 251)
Name: NF1204_high_94
Description: NF1204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1204_high_94 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 30663120 - 30663363
Alignment:
| Q |
1 |
cttgatagaaacaataactacaaattttatagcatataaaaactattcatggaaaaaactgtataatgtaacttcaatgatgacaaagggtcgggtctga |
100 |
Q |
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| T |
30663120 |
cttgatagaaacaataactacaaattttataacatataaaaactattcatggaaaaaactatataatgtaacttcaatgatgacaaagggtcgggtctga |
30663219 |
T |
|
| Q |
101 |
atttggatttgggaaatctccaacagaacttttcacacaagcaactaaagcagcaaagaaagtaaagttaacacaacttacatgagtaccatcacgacca |
200 |
Q |
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| T |
30663220 |
atttggatttgggaaatctccaacagaacttttcacagaagcaactaaagcagcaaagaaagtaaagttaacacaacttacatgagtaccatcacgacca |
30663319 |
T |
|
| Q |
201 |
gctaatggggagtcatttacaccaaaagtcatcgatattgttgg |
244 |
Q |
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| T |
30663320 |
gctaatggggagtcatttacaccaaaagtcatcgatattgttgg |
30663363 |
T |
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