View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1204_low_46 (Length: 386)

Name: NF1204_low_46
Description: NF1204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1204_low_46
NF1204_low_46
[»] chr7 (51 HSPs)
chr7 (203-317)||(26459371-26459486)
chr7 (204-317)||(43215184-43215298)
chr7 (203-317)||(39631844-39631959)
chr7 (249-317)||(18363696-18363764)
chr7 (203-317)||(17113795-17113910)
chr7 (242-317)||(42836002-42836077)
chr7 (251-317)||(25021345-25021411)
chr7 (203-318)||(20335792-20335908)
chr7 (226-317)||(23552118-23552210)
chr7 (249-317)||(30579335-30579403)
chr7 (255-314)||(45976937-45976996)
chr7 (224-317)||(22760863-22760957)
chr7 (224-317)||(33869427-33869521)
chr7 (251-313)||(42711962-42712024)
chr7 (261-317)||(2446308-2446364)
chr7 (203-318)||(23301563-23301679)
chr7 (249-317)||(24513797-24513865)
chr7 (252-320)||(25590608-25590676)
chr7 (253-317)||(30442488-30442552)
chr7 (249-317)||(43590907-43590975)
chr7 (248-315)||(21854550-21854617)
chr7 (225-315)||(29385726-29385817)
chr7 (266-317)||(45559200-45559251)
chr7 (251-317)||(39499729-39499795)
chr7 (249-317)||(18011357-18011426)
chr7 (249-317)||(5579242-5579310)
chr7 (249-317)||(7801180-7801248)
chr7 (249-317)||(17041020-17041088)
chr7 (253-317)||(19553454-19553517)
chr7 (249-317)||(48771938-48772006)
chr7 (203-317)||(2962460-2962574)
chr7 (203-317)||(35119383-35119498)
chr7 (204-314)||(37162312-37162423)
chr7 (249-312)||(41519272-41519335)
chr7 (263-317)||(25956314-25956368)
chr7 (263-317)||(41487362-41487416)
chr7 (249-322)||(15137548-15137621)
chr7 (261-314)||(15905693-15905746)
chr7 (261-314)||(20952169-20952222)
chr7 (253-317)||(5273602-5273666)
chr7 (249-297)||(5668579-5668627)
chr7 (224-303)||(11700179-11700258)
chr7 (249-317)||(14058253-14058321)
chr7 (249-317)||(14368281-14368349)
chr7 (249-317)||(18056783-18056851)
chr7 (251-311)||(21877814-21877874)
chr7 (249-317)||(23945861-23945929)
chr7 (284-320)||(26199506-26199542)
chr7 (249-317)||(37233580-37233648)
chr7 (249-317)||(45709716-45709784)
chr7 (249-317)||(48125183-48125250)
[»] chr1 (39 HSPs)
chr1 (204-317)||(36371470-36371584)
chr1 (204-315)||(33700735-33700847)
chr1 (203-317)||(4566548-4566662)
chr1 (203-318)||(2799861-2799977)
chr1 (203-317)||(21547441-21547556)
chr1 (224-317)||(9165177-9165271)
chr1 (206-317)||(8904414-8904526)
chr1 (253-317)||(31794276-31794340)
chr1 (203-317)||(8177143-8177258)
chr1 (251-317)||(40257399-40257465)
chr1 (225-317)||(51814494-51814587)
chr1 (204-313)||(1247117-1247227)
chr1 (249-317)||(6122794-6122862)
chr1 (207-314)||(15786286-15786393)
chr1 (261-313)||(24047122-24047174)
chr1 (249-317)||(52116789-52116857)
chr1 (263-318)||(21694445-21694500)
chr1 (249-314)||(24730387-24730452)
chr1 (249-317)||(16893394-16893462)
chr1 (261-317)||(45235399-45235455)
chr1 (261-317)||(51703779-51703835)
chr1 (203-317)||(6650595-6650710)
chr1 (250-317)||(9570644-9570710)
chr1 (250-317)||(10526823-10526890)
chr1 (203-317)||(11063556-11063671)
chr1 (204-317)||(29056377-29056492)
chr1 (211-317)||(37400274-37400381)
chr1 (250-317)||(41508831-41508898)
chr1 (251-317)||(50901581-50901648)
chr1 (224-293)||(3265948-3266018)
chr1 (251-313)||(17745266-17745328)
chr1 (264-314)||(26232409-26232459)
chr1 (249-318)||(16169986-16170055)
chr1 (249-306)||(52336782-52336839)
chr1 (249-313)||(4824975-4825039)
chr1 (249-317)||(15581150-15581217)
chr1 (261-316)||(18459251-18459307)
chr1 (261-317)||(21268013-21268069)
chr1 (203-278)||(40810506-40810582)
[»] chr3 (32 HSPs)
chr3 (203-317)||(27093323-27093437)
chr3 (249-317)||(8170672-8170740)
chr3 (229-320)||(16354879-16354971)
chr3 (211-314)||(53412948-53413052)
chr3 (203-317)||(30311306-30311421)
chr3 (203-317)||(46518628-46518743)
chr3 (204-317)||(15048023-15048137)
chr3 (211-317)||(19154631-19154738)
chr3 (224-317)||(37788447-37788541)
chr3 (251-318)||(16212982-16213049)
chr3 (203-317)||(34062509-34062626)
chr3 (203-317)||(10445100-10445216)
chr3 (249-317)||(14186648-14186715)
chr3 (204-317)||(4222141-4222255)
chr3 (261-319)||(31788990-31789048)
chr3 (253-317)||(5499419-5499483)
chr3 (261-317)||(27923063-27923119)
chr3 (250-306)||(32651447-32651503)
chr3 (261-317)||(36720381-36720437)
chr3 (249-313)||(49494154-49494218)
chr3 (249-316)||(47454625-47454692)
chr3 (224-317)||(10828715-10828809)
chr3 (224-317)||(28703386-28703480)
chr3 (249-310)||(8075135-8075196)
chr3 (225-317)||(10499092-10499185)
chr3 (284-317)||(26988996-26989029)
chr3 (253-317)||(7975418-7975482)
chr3 (249-317)||(14339610-14339678)
chr3 (261-317)||(19341801-19341857)
chr3 (261-317)||(31520625-31520681)
chr3 (261-313)||(36797691-36797743)
chr3 (250-310)||(42465539-42465599)
[»] chr5 (24 HSPs)
chr5 (203-317)||(25627057-25627171)
chr5 (203-317)||(7918430-7918545)
chr5 (224-317)||(14285161-14285255)
chr5 (224-317)||(34984806-34984900)
chr5 (251-318)||(21549147-21549214)
chr5 (251-317)||(30883208-30883274)
chr5 (249-317)||(87431-87499)
chr5 (261-317)||(8278295-8278351)
chr5 (226-317)||(16773807-16773899)
chr5 (249-317)||(17028272-17028340)
chr5 (249-317)||(30109316-30109384)
chr5 (227-317)||(3252274-3252365)
chr5 (251-313)||(16436622-16436683)
chr5 (251-317)||(16457810-16457876)
chr5 (224-317)||(26078033-26078127)
chr5 (249-317)||(892482-892550)
chr5 (249-317)||(19043458-19043526)
chr5 (249-317)||(22737082-22737150)
chr5 (261-317)||(29075781-29075837)
chr5 (203-317)||(16638815-16638930)
chr5 (220-306)||(43442207-43442294)
chr5 (211-315)||(18595970-18596075)
chr5 (261-317)||(21589288-21589344)
chr5 (261-317)||(30735090-30735146)
[»] chr4 (40 HSPs)
chr4 (211-317)||(37109320-37109427)
chr4 (203-314)||(7292759-7292871)
chr4 (203-317)||(31759619-31759734)
chr4 (204-317)||(2184994-2185109)
chr4 (250-317)||(46545711-46545778)
chr4 (204-299)||(33632098-33632194)
chr4 (252-317)||(19238588-19238653)
chr4 (203-307)||(27372618-27372723)
chr4 (203-318)||(4249176-4249292)
chr4 (249-317)||(7949462-7949530)
chr4 (226-317)||(19680772-19680864)
chr4 (203-302)||(38869783-38869883)
chr4 (203-317)||(1730450-1730565)
chr4 (251-317)||(8030214-8030280)
chr4 (251-313)||(13901746-13901808)
chr4 (203-296)||(16581714-16581808)
chr4 (249-319)||(39509068-39509138)
chr4 (253-317)||(37274471-37274536)
chr4 (249-310)||(49576902-49576963)
chr4 (249-318)||(55427208-55427277)
chr4 (226-318)||(2622379-2622476)
chr4 (261-317)||(9936981-9937037)
chr4 (249-317)||(37720222-37720290)
chr4 (203-293)||(23377980-23378071)
chr4 (251-317)||(17618281-17618347)
chr4 (251-313)||(24234649-24234711)
chr4 (251-317)||(31826609-31826675)
chr4 (253-315)||(40283998-40284060)
chr4 (264-314)||(41683752-41683802)
chr4 (251-317)||(51250532-51250598)
chr4 (203-317)||(15180741-15180853)
chr4 (268-317)||(27965537-27965586)
chr4 (225-317)||(28635696-28635789)
chr4 (261-314)||(41346983-41347036)
chr4 (263-296)||(43456799-43456832)
chr4 (264-312)||(33755968-33756016)
chr4 (253-317)||(44865334-44865398)
chr4 (249-317)||(46295097-46295165)
chr4 (251-291)||(47202433-47202473)
chr4 (251-307)||(51747844-51747900)
[»] chr2 (39 HSPs)
chr2 (211-317)||(40416359-40416466)
chr2 (204-317)||(42922414-42922529)
chr2 (225-317)||(42327378-42327471)
chr2 (203-317)||(4060175-4060290)
chr2 (249-317)||(11062360-11062428)
chr2 (249-317)||(29503271-29503339)
chr2 (251-318)||(19016030-19016097)
chr2 (204-317)||(13803495-13803609)
chr2 (203-316)||(16918539-16918653)
chr2 (249-317)||(21195684-21195752)
chr2 (249-317)||(37480075-37480143)
chr2 (253-317)||(42602554-42602618)
chr2 (224-318)||(19244108-19244203)
chr2 (225-321)||(1435060-1435156)
chr2 (261-317)||(1729816-1729872)
chr2 (249-317)||(11251087-11251155)
chr2 (249-317)||(23052531-23052599)
chr2 (203-317)||(34041549-34041664)
chr2 (224-317)||(14500277-14500371)
chr2 (261-317)||(7799055-7799111)
chr2 (249-317)||(39714992-39715060)
chr2 (254-317)||(4438992-4439055)
chr2 (203-317)||(19322768-19322883)
chr2 (251-317)||(12994386-12994452)
chr2 (252-310)||(23140923-23140981)
chr2 (252-310)||(23552713-23552771)
chr2 (251-317)||(41908648-41908714)
chr2 (252-317)||(5147690-5147755)
chr2 (261-310)||(29964822-29964871)
chr2 (225-317)||(29996443-29996536)
chr2 (261-314)||(33962804-33962857)
chr2 (205-317)||(45026743-45026856)
chr2 (261-313)||(3001383-3001435)
chr2 (249-317)||(18259730-18259798)
chr2 (261-313)||(24191842-24191894)
chr2 (249-317)||(26482093-26482160)
chr2 (261-317)||(29197396-29197452)
chr2 (249-281)||(33839268-33839300)
chr2 (253-313)||(38551772-38551832)
[»] chr6 (17 HSPs)
chr6 (203-275)||(7320764-7320836)
chr6 (203-317)||(12188264-12188379)
chr6 (250-318)||(3779338-3779406)
chr6 (226-317)||(33549104-33549196)
chr6 (251-317)||(2616476-2616542)
chr6 (339-373)||(7320869-7320903)
chr6 (204-317)||(13330087-13330201)
chr6 (249-313)||(10338182-10338246)
chr6 (249-317)||(13661521-13661588)
chr6 (261-317)||(21418470-21418526)
chr6 (249-317)||(24334033-24334101)
chr6 (249-317)||(31622999-31623067)
chr6 (250-317)||(14199956-14200023)
chr6 (267-317)||(15497063-15497113)
chr6 (249-318)||(19638012-19638081)
chr6 (261-314)||(34293836-34293889)
chr6 (249-293)||(4105075-4105119)
[»] scaffold0002 (1 HSPs)
scaffold0002 (249-314)||(94979-95044)
[»] chr8 (35 HSPs)
chr8 (203-317)||(18540298-18540413)
chr8 (203-317)||(33017214-33017328)
chr8 (249-315)||(2203494-2203560)
chr8 (249-317)||(16852340-16852408)
chr8 (249-317)||(19703495-19703563)
chr8 (203-318)||(30483845-30483961)
chr8 (249-317)||(44780122-44780190)
chr8 (250-317)||(5264544-5264611)
chr8 (203-317)||(12988428-12988542)
chr8 (249-315)||(3624582-3624648)
chr8 (251-317)||(28783060-28783126)
chr8 (226-317)||(968362-968454)
chr8 (249-318)||(26688864-26688933)
chr8 (249-317)||(11819776-11819844)
chr8 (262-318)||(20994479-20994535)
chr8 (249-317)||(23361657-23361725)
chr8 (203-318)||(29431010-29431126)
chr8 (250-313)||(4435979-4436042)
chr8 (211-317)||(13129668-13129775)
chr8 (249-315)||(8794353-8794419)
chr8 (224-317)||(11518859-11518953)
chr8 (249-318)||(8059631-8059700)
chr8 (249-317)||(23874390-23874458)
chr8 (249-317)||(27750730-27750798)
chr8 (249-317)||(33727881-33727949)
chr8 (261-317)||(35826311-35826367)
chr8 (262-317)||(3826798-3826853)
chr8 (250-317)||(6436564-6436631)
chr8 (249-316)||(29858057-29858124)
chr8 (254-317)||(33823084-33823146)
chr8 (251-314)||(36205198-36205261)
chr8 (204-317)||(6569733-6569847)
chr8 (204-317)||(11928693-11928807)
chr8 (251-317)||(18897166-18897232)
chr8 (261-317)||(35641921-35641977)
[»] scaffold0258 (1 HSPs)
scaffold0258 (226-318)||(15307-15400)
[»] scaffold0211 (1 HSPs)
scaffold0211 (203-318)||(24052-24168)
[»] scaffold0180 (1 HSPs)
scaffold0180 (249-306)||(19970-20027)
[»] scaffold0118 (1 HSPs)
scaffold0118 (225-317)||(41616-41709)
[»] scaffold0194 (1 HSPs)
scaffold0194 (225-318)||(13029-13123)
[»] scaffold0122 (1 HSPs)
scaffold0122 (249-310)||(6927-6988)
[»] scaffold0126 (1 HSPs)
scaffold0126 (221-296)||(25326-25402)
[»] scaffold0070 (1 HSPs)
scaffold0070 (226-317)||(42504-42596)
[»] scaffold0517 (1 HSPs)
scaffold0517 (211-317)||(7695-7802)
[»] scaffold0004 (1 HSPs)
scaffold0004 (204-313)||(81526-81636)


Alignment Details
Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 26459371 - 26459486
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| || |||||||||||| || |||||||||  ||||||||||| |||||||||||||||||| ||  ||||||||||||| ||||    
T  26459371 gaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 26459470  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  26459471 ccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 43215298 - 43215184
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||| ||  |||||||||||| | |||||||||  ||||||||||| |||||||||||||||| | ||  ||||||||||||| ||| |    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagac 43215199  T
Q  303 caacccaagtgggtt 317  Q
    |||||||||||||||    
T  43215198 caacccaagtgggtt 43215184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 39631959 - 39631844
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  |||||||||||  | |||||||||  ||||||||||| |||||||||  ||||||| ||  ||||||||||||| ||||    
T  39631959 gaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactagg 39631860  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  39631859 ccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 18363764 - 18363696
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||||||||||||||||  | ||||||| |||||| ||||||||||||||||||||    
T  18363764 cctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 17113910 - 17113795
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||| |||||| |||||||||  || |||||||| ||||| |||||||||||| |||  |||||||||| | ||||    
T  17113910 gaagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatacaactagg 17113811  T
Q  302 ccaacccaagtgggtt 317  Q
    ||| ||||||||||||    
T  17113810 ccaccccaagtgggtt 17113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 42836002 - 42836077
Alignment:
Q  242 gaatcggcctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| |||||| |||| |||| ||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  42836002 gaatcgacctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 25021345 - 25021411
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| || |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 318
Target Start/End: Original strand, 20335792 - 20335908
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||| ||  |||| ||||||| ||||   ||||||||  ||||||||||  |||||||||||||||||| ||  ||||||||||||  |||     
T  20335792 gaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctaga 20335891  T
Q  302 ccaacccaagtgggttg 318  Q
    |||||||||||||||||    
T  20335892 ccaacccaagtgggttg 20335908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 23552210 - 23552118
Alignment:
Q  226 aaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| | |||||||||  || |||||||| |||||||||||||||||| ||  |||| ||||| || ||||||||||||||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtt 23552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 30579403 - 30579335
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||| | ||||||||| || ||||||||||||||  |||||||||||||||||||    
T  30579403 cctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 45976937 - 45976996
Alignment:
Q  255 accttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    ||||| |||||||||||||||||| ||  ||||||||||||| |||||||||||||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 22760957 - 22760863
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||   ||||||||  ||||||||||| |||||||||||||||||| ||  |||| ||||||||  || ||||||||||||||||    
T  22760957 tcaaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 33869427 - 33869521
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| || || |||||||||  || |||||||| || ||||||||||| ||| || |||||||||||| | ||||||||||||||||||||    
T  33869427 tcaaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 42712024 - 42711962
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||| |||||||||||||||||||||  ||||| ||||||| || |||||||||||||    
T  42712024 tgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaacccaagtg 42711962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 2446364 - 2446308
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  |||||||||||||| || ||||||||||||||||    
T  2446364 aggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 318
Target Start/End: Original strand, 23301563 - 23301679
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||| || |||| ||||||| |||  | ||||||||   || |||||||  |||||||||||||||||| ||  |||| ||||||||  |||    
T  23301563 gaagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccagg 23301662  T
Q  302 ccaacccaagtgggttg 318  Q
    |||||||||||||||||    
T  23301663 ccaacccaagtgggttg 23301679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 24513865 - 24513797
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  ||||| || |||||||||  | |||||||||||||| ||||||||||||||||||||    
T  24513865 cctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 25590676 - 25590608
Alignment:
Q  252 gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttggt 320  Q
    |||||||  ||||||||||||||||||  | ||||||||||||||  ||| ||||||||||||||||||    
T  25590676 gagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggttggt 25590608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 30442552 - 30442488
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| |||||||||| ||||||| ||  ||||||||||||| | ||||||||||||||||||    
T  30442552 agaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 43590975 - 43590907
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| || |||||||||||||||||| ||  |||||||||||||  |||||||||||| ||||||    
T  43590975 cctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 21854617 - 21854550
Alignment:
Q  248 gcctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtggg 315  Q
    ||||||||| || ||||||||||||||||||  |  | |||||||||||| |||||||||||||||||    
T  21854617 gcctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 315
Target Start/End: Original strand, 29385726 - 29385817
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtggg 315  Q
    |||||||||| || ||||||||   ||||||||||| |||||||||||||||| | ||  |||||||| |||||  ||||||||||||||||    
T  29385726 caaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 45559251 - 45559200
Alignment:
Q  266 gagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| | ||| ||||||||||||| ||||||||||||||||||||    
T  45559251 gagcacactccaaggttccaagccaataccactaggccaacccaagtgggtt 45559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 39499729 - 39499795
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| | ||||| ||||||| || ||  ||||||||||||| ||||||||||||||||||||    
T  39499729 tgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 18011357 - 18011426
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaat-accattaggccaacccaagtgggtt 317  Q
    ||||||||||   |||||||||||||| || || |||||||||| |||||||||||||||||| ||||||    
T  18011357 cctgagacctcatggaggagcacactctcaggtctcaagccaattaccattaggccaacccaactgggtt 18011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 5579242 - 5579310
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||| | ||  |||||||| ||||  ||| |||||||||||||||    
T  5579242 cctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 7801248 - 7801180
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| | |||||||||||||||| ||  |||| ||||||||  ||||||| |||||||||||    
T  7801248 cctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 17041020 - 17041088
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||| |||  |  ||||||||| ||| ||| ||||||||||||||||    
T  17041020 cctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggtt 17041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 19553517 - 19553454
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| |||||||||||||||||| ||  |||||||||||||  ||||||||||||| |||||    
T  19553517 agaccttgaggaggagcacactcccaggtc-caagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 48772006 - 48771938
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  ||||||||||||||||||  |  |||||||||||||  | |||||||||||||||||    
T  48772006 cctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 2962574 - 2962460
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||||||||||||  |  |||||||||   || |||||||||  ||||||| ||| ||||||||||||||| || ||| ||| ||||||||| |||     
T  2962574 gaagaagttaaactaactccctcaaattggttccagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactaga 2962475  T
Q  302 ccaacccaagtgggtt 317  Q
    |||| |||||||||||    
T  2962474 ccaa-ccaagtgggtt 2962460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 35119498 - 35119383
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcg-gcctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||||||  |||||||||||| | |||||||||  ||||| | ||| |||| ||||| || ||||  |  |||| |||||||| ||||    
T  35119498 gaagaagataaactaatcctctcaaattggcattaaagagaatcgaacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactagg 35119399  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||| ||||||    
T  35119398 ccaacccaaatgggtt 35119383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 37162312 - 37162423
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcg-gcctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||||||  ||||||||||| || |||||||||  | ||||||||| || || ||||||||||||  | ||||| |  ||||| |||||    
T  37162312 aagaagctaaactaatcccctcaaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactcccaaatctcaagtctttaccactaggc 37162411  T
Q  303 caacccaagtgg 314  Q
    ||||| ||||||    
T  37162412 caaccgaagtgg 37162423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 41519272 - 41519335
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagt 312  Q
    ||||||||||| |||||||||||||||| |  |  |||| |||||||| |||||||||||||||    
T  41519272 cctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 25956314 - 25956368
Alignment:
Q  263 gaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||| | ||  ||||||||||||| ||||||||||||| ||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 41487416 - 41487362
Alignment:
Q  263 gaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| ||||||||| ||  |||||||||||||  |||||||||||||||||||    
T  41487416 gaggagaacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 41487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 15137621 - 15137548
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttggtta 322  Q
    ||||||||||| |||||||||||||||| |  |  |||| || |||||  ||||||||||||||||||| ||||    
T  15137621 cctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggttagtta 15137548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 15905693 - 15905746
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    |||||||||||||||||| ||  ||||||||||||   ||||||||||||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaataccgccaggccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 20952169 - 20952222
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    |||||||||||||||||| ||  ||| |||||||||| ||| ||||||||||||    
T  20952169 aggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 5273602 - 5273666
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| |||||||||||||||  | ||  |||||||| ||||  |||||||||||||||||||    
T  5273602 agaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 5668579 - 5668627
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccat 297  Q
    ||||||||||  |||||||||||||| ||||||  ||||||||||||||    
T  5668579 cctgagacctcgaggaggagcacacttccatgtcccaagccaataccat 5668627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 11700258 - 11700179
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggcc 303  Q
    ||||||||||| || |||||||||  ||||||||||| |||||||||| |||| || || |||||||||| ||| ||||||    
T  11700258 tcaaattggca-cagagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaatgccactaggcc 11700179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 14058321 - 14058253
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||| |||||||||| || ||| |||| ||||||||  |||||||| |||| |||||    
T  14058321 cctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggtt 14058253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 14368349 - 14368281
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||| |||||||||| || ||| |||| ||||||||  |||||||| |||| |||||    
T  14368349 cctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaactcaagcgggtt 14368281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 18056783 - 18056851
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||||||||||||| | |   |||| ||||||||  || | ||||||||||||||    
T  18056783 cctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgggtt 18056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 311
Target Start/End: Complemental strand, 21877874 - 21877814
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaag 311  Q
    ||||||||| ||||||||||| |||||| ||  |||| |||||||| ||||||||| ||||    
T  21877874 tgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 23945929 - 23945861
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  | |||||||||| || || |||  ||| ||||||||||||| |||||||||||||||    
T  23945929 cctgagacctcaatgaggagcacattctcaggttctaagtcaataccattaggtcaacccaagtgggtt 23945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 26199542 - 26199506
Alignment:
Q  284 caagccaataccattaggccaacccaagtgggttggt 320  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  26199542 caagccaataccactaggccaactcaagtgggttggt 26199506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 37233580 - 37233648
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||||||||||||||||  |  |||||||||| ||  | | |||||||||||||||    
T  37233580 cctgagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtt 37233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 45709716 - 45709784
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  ||||||||||||||| ||  |  ||||| ||||||| ||||||||||||| ||||||    
T  45709716 cctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggtt 45709784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 48125183 - 48125250
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||| ||||||||||||||| | ||  |||||||| ||||  || ||||||||||||||||    
T  48125183 cctgagaccttc-ggaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 36371584 - 36371470
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||| ||  |||||||||||||| |||||||||  ||| ||||||| |||||||||||||||||| ||| ||||||||||||| |||||    
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 36371485  T
Q  303 caacccaagtgggtt 317  Q
    |||||||||||||||    
T  36371484 caacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 315
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    ||||||||||||||| ||  | ||||||||| || |||||||||  ||||||||||| ||||||||||||||||||  || ||||||||||||| |||||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  303 caacccaagtggg 315  Q
    |||||||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 4566662 - 4566548
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| || || |||||| ||||| |||||||||  ||||||||| | |||||||||||||||||| ||| |||||||||| || ||||    
T  4566662 gaagaagctaaactaacccctt-aaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactagg 4566564  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  4566563 ccaacccaagtgggtt 4566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 2799977 - 2799861
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || |||||||||  ||||||||||| ||||||||||||||||||  | ||||||| |||||| ||||    
T  2799977 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactagg 2799878  T
Q  302 ccaacccaagtgggttg 318  Q
    |||| | ||||||||||    
T  2799877 ccaagcgaagtgggttg 2799861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 21547441 - 21547556
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||||||  |||   |||||||||||| |||||||||  ||||| ||||  ||||||||||| |||||||||  ||||||||||||| ||||    
T  21547441 gaagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactagg 21547540  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||| ||||    
T  21547541 ccaacccaagtcggtt 21547556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 9165177 - 9165271
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || ||||||| |  |||||||| || |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  9165177 tcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 8904526 - 8904414
Alignment:
Q  206 gaagttaaactaatccattcaaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggcca 304  Q
    ||||||||||||| ||  ||||||||||| || |||||||||  || |||||||| ||||||||||||||| ||| |  |||| |||||| | |||||||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggcca 8904427  T
Q  305 acccaagtgggtt 317  Q
    |||||||||||||    
T  8904426 acccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 31794276 - 31794340
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 8177143 - 8177258
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || |||||||||  ||||| ||||| ||||||||||||||||||  |  ||||||||||||| ||||    
T  8177143 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactagg 8177242  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||| ||| ||||||    
T  8177243 ccaactcaaatgggtt 8177258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 40257465 - 40257399
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||  |||||||||||||||||||    
T  40257465 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 51814587 - 51814494
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| |  |||||||||  ||||||||||| ||||||||||||||| ||  | ||||| ||||||||| |||||||||||||||||||    
T  51814587 caaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 1247227 - 1247117
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||| ||| || |||||||||| | || |||||||||  ||||||||||| |||||||| ||||||||| |||||||  || ||||| || ||    
T  1247227 aagaagctaaaataaccccttcaaattggtaccagagagaatcgaacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagc 1247128  T
Q  303 caacccaagtg 313  Q
    |||||||||||    
T  1247127 caacccaagtg 1247117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 6122862 - 6122794
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||  |||||| |||||| |||| |||||||| ||||||    
T  6122862 cctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 314
Target Start/End: Original strand, 15786286 - 15786393
Alignment:
Q  207 aagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaa 305  Q
    |||||||||||| || | ||||||| || || |||||||||  ||||||||||| ||||||||||||||||||  |  ||||||||||| | ||| ||||    
T  15786286 aagttaaactaacccct-caaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaa 15786384  T
Q  306 cccaagtgg 314  Q
    |||||||||    
T  15786385 cccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 24047122 - 24047174
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    |||||||||||||||||| || ||||||||||||||| || ||||||||||||    
T  24047122 aggaggagcacactcccaagtctcaagccaataccatgagaccaacccaagtg 24047174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 52116789 - 52116857
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| || |||||||||||||||||| ||  |||||||||||||  |||||||||||| ||||||    
T  52116789 cctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 21694500 - 21694445
Alignment:
Q  263 gaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    |||||||||||||||| || ||||||||||||||  ||| ||||||||||||||||    
T  21694500 gaggagcacactcccaagtctcaagccaataccaccaggtcaacccaagtgggttg 21694445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 24730452 - 24730387
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    |||| |||||| | ||||||||||||||||  | ||||| |||||||| |||||||||||||||||    
T  24730452 cctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 16893462 - 16893394
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||||| |||||||||  | ||||||||||||||  ||| |||||||||||||||    
T  16893462 cctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 45235399 - 45235455
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  ||| |||||||||| || ||||||||||||||||    
T  45235399 aggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtt 45235455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 51703835 - 51703779
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||||||  || ||||||||||||| ||| ||||||||| ||||||    
T  51703835 aggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 6650710 - 6650595
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| ||||||||||||   |||||| || || |||||||||  |||||||| || |||||||||| ||||||   |  ||||||||||||| ||||    
T  6650710 gaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactagg 6650611  T
Q  302 ccaacccaagtgggtt 317  Q
    |||||| || ||||||    
T  6650610 ccaacctaattgggtt 6650595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 9570710 - 9570644
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| |||| ||||||||||| | || ||||||||| ||||| | |||||||||||||||||    
T  9570710 ctgagaccttgaggaagagcacactccaaggtctcaagccaacaccatca-gccaacccaagtgggtt 9570644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 10526890 - 10526823
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| |||||||||| ||||||| ||  ||||||||||||| | | ||||||||| ||||||    
T  10526890 ctgagaccttgaggaggagcaaactcccaggtcccaagccaataccactggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 11063671 - 11063556
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| || ||||||||||||  | |||||||||  ||| ||||||| ||||||| ||||||  || ||  ||||||||||||| |||     
T  11063671 gaagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaataccactaga 11063572  T
Q  302 ccaacccaagtgggtt 317  Q
     |||||||| ||||||    
T  11063571 tcaacccaaatgggtt 11063556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 29056492 - 29056377
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcg-gcctgagaccttcaggaggagcacactcccatgtttcaagcc-aataccattagg 301  Q
    ||||||||||| ||| || || |||||||||||| ||| |||||  ||||| | |||||||| ||||||||||||| ||  ||| || ||||||| | |     
T  29056492 aagaagttaaattaacccttttaaattggcatcagagataatcgaacctgaaaacttcaggatgagcacactcccaggtcccaaaccaaataccactgga 29056393  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  29056392 ccaacccaagtgggtt 29056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 317
Target Start/End: Complemental strand, 37400381 - 37400274
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    ||||||| ||||| |||||||||| |  | |||||||  || |||||||| ||||||||||||||  || || ||||||||||||||  || ||||||||    
T  37400381 taaactagtccatccaaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaaccca 37400282  T
Q  310 agtgggtt 317  Q
    ||| ||||    
T  37400281 agttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 41508898 - 41508831
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| ||||||||||||||||||  |  ||| ||| |||||  |||||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 50901648 - 50901581
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaat-accattaggccaacccaagtgggtt 317  Q
    ||||||||  |||||||||||||| ||| ||  ||||||||| |||| ||||||||||||||||||||    
T  50901648 tgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 3266018 - 3265948
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaata 293  Q
    ||||||||| | || |||||||||  ||||||||||| |||||||||||||||||| ||| |||| |||||    
T  3266018 tcaaattggaaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 17745266 - 17745328
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||  ||||||||||||| | || ||  ||||||||||||| ||||||||||||||||    
T  17745266 tgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 26232409 - 26232459
Alignment:
Q  264 aggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    |||||||||||||||  | |||||||||||||| ||| |||||||||||||    
T  26232409 aggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 16169986 - 16170055
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||| ||||| ||||||| |||||||||| ||  |||| ||||||||  |||| |||||||||||||||    
T  16169986 cctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggttg 16170055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 52336782 - 52336839
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaac 306  Q
    ||||||| ||| ||||||||||||||||||  |  ||||||||||||| |||||||||    
T  52336782 cctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 4825039 - 4824975
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||||| | |||||||||||||| | ||  |||||||| ||||| || ||||||||||||    
T  4825039 cctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtg 4824975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 15581150 - 15581217
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || ||||||||||||| | ||  |||||||| ||||  |||||||||||||||||||    
T  15581150 cctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 18459251 - 18459307
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaa-taccattaggccaacccaagtgggt 316  Q
    |||||||||||||||||| ||  |||||||| ||||| ||| |||||||||||||||    
T  18459251 aggaggagcacactcccaagtcccaagccaattaccactagaccaacccaagtgggt 18459307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 21268013 - 21268069
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  ||||||||||| | ||| ||||| ||||||||||    
T  21268013 aggaggagcacactcccaagtcccaagccaatactactagcccaactcaagtgggtt 21268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 278
Target Start/End: Complemental strand, 40810582 - 40810506
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcg-gcctgagaccttcaggaggagcacactccca 278  Q
    ||||||| |||||||| ||  ||||||||||| || |||||||||  ||||||||||| | ||||| ||||||||||    
T  40810582 gaagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactccca 40810506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 27093323 - 27093437
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| || |||||||||||| || ||||||||   ||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||    
T  27093323 gaagaagataaactaaccc-ttcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactagg 27093421  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  27093422 ccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 8170740 - 8170672
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  8170740 cctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaacccaaatgggtt 8170672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 320
Target Start/End: Original strand, 16354879 - 16354971
Alignment:
Q  229 ttggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttggt 320  Q
    |||||| || |||||||||  ||||||||| | ||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||||||    
T  16354879 ttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggttggt 16354971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 314
Target Start/End: Complemental strand, 53413052 - 53412948
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    |||||||| ||  ||||||||||| || ||||||| |  ||||||||||| |||||||||||||||||| ||| ||||||||||||| ||| ||||||||    
T  53413052 taaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaaccca 53412953  T
Q  310 agtgg 314  Q
    |||||    
T  53412952 agtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 30311421 - 30311306
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || |||||||||  ||||||||||| ||||||||||||||||||  |  |||||| |||||| ||||    
T  30311421 gaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactagg 30311322  T
Q  302 ccaacccaagtgggtt 317  Q
    |||||||| |||||||    
T  30311321 ccaacccaggtgggtt 30311306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 46518743 - 46518628
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  |||||||||||||| ||||||||   ||||| ||||| ||||||||||||||||||  |  ||||||||||||| || |    
T  46518743 gaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatg 46518644  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  46518643 ccaacccaagtgggtt 46518628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 15048023 - 15048137
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    ||||||||||||||| ||  ||||||||||| || ||| |||||  ||||||||||| |||||||||||| |||||  |  |||||| ||||||||| ||    
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagc 15048122  T
Q  303 caacccaagtgggtt 317  Q
    |||||||||||||||    
T  15048123 caacccaagtgggtt 15048137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 317
Target Start/End: Complemental strand, 19154738 - 19154631
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    |||||||| |||  ||||||| ||||| |||||||||  ||||||||||| ||||||||||||||| || |  |||||||||||| | ||||||||||||    
T  19154738 taaactaacccacccaaattgacatcaaagagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaaccca 19154639  T
Q  310 agtgggtt 317  Q
    | ||||||    
T  19154638 aatgggtt 19154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 37788447 - 37788541
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||  | |||||||||  ||||||||||| |||||||||||||||| | ||| |||| |||||||| | ||||||||||||||||||    
T  37788447 tcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 16212982 - 16213049
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||| |||||||||||||||||| || ||||| ||| | |||||| |||||||||||||||||    
T  16212982 tgagaccttaaggaggagcacactcccaagtctcaaggcaacatcattagaccaacccaagtgggttg 16213049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 34062509 - 34062626
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggag--cacactcccatgtttcaagccaataccatta 299  Q
    ||||||||||||||||     ||||||||||| || ||||||| |  ||||||||||| ||||||||  ||||||||||  ||||||||||||| || |     
T  34062509 gaagaagttaaactaacatcctcaaattggcaccagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatcactg 34062608  T
Q  300 ggccaacccaagtgggtt 317  Q
    ||||||||||||||||||    
T  34062609 ggccaacccaagtgggtt 34062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 10445100 - 10445216
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaa-taccattag 300  Q
    ||||||| |||| ||  ||| ||||||| ||| || |||||||||  ||||||||||  |||||||||||||||||| ||  |||||||| | ||| |||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactag 10445199  T
Q  301 gccaacccaagtgggtt 317  Q
    |||||||||||||||||    
T  10445200 gccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 14186715 - 14186648
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||| | ||  |||| |||||||| ||||||||||||||||||||    
T  14186715 cctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 4222255 - 4222141
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||||||||||||  ||   |||||| || || |||||||||  ||| |||| || ||||||||||||||||||  |  ||||||||||||| || ||    
T  4222255 aagaagttaaactaactcacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagc 4222156  T
Q  303 caacccaagtgggtt 317  Q
    |||||||||||||||    
T  4222155 caacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 31788990 - 31789048
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttgg 319  Q
    ||||||||||||||||||  |  |||||||||| || ||||||||||||||||||||||    
T  31788990 aggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggttgg 31789048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 5499419 - 5499483
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| ||||||||||||||| ||  | ||||| ||||||||  |||||||||||||||||||    
T  5499419 agaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 27923063 - 27923119
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||| ||||||  |||||||||||||  ||||||||| |||||||||    
T  27923063 aggaggagcacacttccatgtcccaagccaataccaccaggccaacctaagtgggtt 27923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 32651447 - 32651503
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaac 306  Q
    |||||| ||| |||||||||||||||||| ||  ||||||||||||| |||||||||    
T  32651447 ctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 36720437 - 36720381
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||||||| |  |||||||||||||  || ||||||||||||||||    
T  36720437 aggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 49494154 - 49494218
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||||  |||| |||||||||||||  ||||||| |||||||| ||||| ||||||||||    
T  49494154 cctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtg 49494218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 47454625 - 47454692
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggt 316  Q
    ||||||||||  |||||||||||||||| |  | |||||||||||||| |||  ||||||||||||||    
T  47454625 cctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 10828715 - 10828809
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| |||||  ||||||||||| || ||||||| ||||||| ||   ||| ||||| || |||| || ||||||||||||    
T  10828715 tcaaattggcatcatagataatcgaacctgagaccttaagtaggagcatactcccaggtcctaagacaatatcactaggtcagcccaagtgggtt 10828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 28703386 - 28703480
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || |||||||||  ||||||||||| | ||||||||||||||||  |  ||||| |||| || | | ||||||||||||||||    
T  28703386 tcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 8075135 - 8075196
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    ||||| ||||| |||||||||||||||||| ||  |||||| |||||| |||| ||||||||    
T  8075135 cctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaa 8075196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 10499092 - 10499185
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| ||||  |||||||||  ||||||||||  |||| ||||| |||||||  |  |||||||||||||  |||||||||||||||||||    
T  10499092 caaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 317
Target Start/End: Complemental strand, 26989029 - 26988996
Alignment:
Q  284 caagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||| ||||||||||||||||||||    
T  26989029 caagccaataccactaggccaacccaagtgggtt 26988996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 7975482 - 7975418
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| ||||||||||||||||||  |  |||||| |||||| |||||||||| || ||||||    
T  7975482 agaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtt 7975418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 14339678 - 14339610
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| || ||||||||||||||||||  |  |||||||||||||  ||||||| |||| ||||||    
T  14339678 cctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 19341857 - 19341801
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| || ||||| | |||||| |||| |||||||| ||||||    
T  19341857 aggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtt 19341801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 31520625 - 31520681
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||||||  |  ||||||||| |||  |||||||||||||||||||    
T  31520625 aggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 36797743 - 36797691
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||||||||| ||| ||||||| ||||| ||| || ||||||||||||    
T  36797743 aggaggagcacactctcatatttcaagtcaatatcatcagaccaacccaagtg 36797691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 42465539 - 42465599
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    ||||||| || ||||||||||||| |||| ||| ||||| |||||||| || |||||||||    
T  42465539 ctgagactttaaggaggagcacacccccaagttccaagctaataccatcagaccaacccaa 42465599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 25627171 - 25627057
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| || | ||||||| || || |||||||||  ||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||    
T  25627171 gaagaagctaaactaacccct-caaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactagg 25627073  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  25627072 ccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 7918430 - 7918545
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || |||||||||  ||| ||||||| ||||||||  |||||||| ||| ||||||||||||| ||||    
T  7918430 gaagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactagg 7918529  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  7918530 ccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 14285255 - 14285161
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || |||||||||  ||||||||||| |||||||||||||||||| ||| ||||||||| ||| | ||||||||||||||||||    
T  14285255 tcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 34984900 - 34984806
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || |||||||||  ||| ||||||| |||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||    
T  34984900 tcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggtt 34984806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 21549147 - 21549214
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    |||||| || |||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||    
T  21549147 tgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttg 21549214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 30883208 - 30883274
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||||| ||  ||||||||||||| ||| ||||||||||||||||    
T  30883208 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggtt 30883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 87431 - 87499
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||||||||||||||||  || |||| |||||||| |||||||||| |||||||||    
T  87431 cctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtt 87499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 8278295 - 8278351
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  |||||||||||||| || ||||||||||||||||    
T  8278295 aggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 16773899 - 16773807
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||| |||||||||  ||||||||||  |||||||||||||||||| ||  |||| ||||||||  || ||||| ||||||||||    
T  16773899 aaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 17028272 - 17028340
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||  ||| ||||||| | |||| |||||||||||||||    
T  17028272 cctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 30109316 - 30109384
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||||||||||||||| ||  |||||||||||||  | |||||||||||||||||    
T  30109316 cctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 317
Target Start/End: Original strand, 3252274 - 3252365
Alignment:
Q  227 aattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||  ||||||| | | |||| |||  |||||||| || ||||| |||||||| ||||||||||||||||||||    
T  3252274 aattggcatcagagagaatcgaacctgagagcctgaggaagagtgcactcccaagtctcaagtcaataccactaggccaacccaagtgggtt 3252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 16436683 - 16436622
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||| |||||||||||||||| | ||  ||||||||||||| ||||||||||||||||    
T  16436683 tgagaccttgaggaggagcacactccaa-gtcccaagccaataccactaggccaacccaagtg 16436622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 16457876 - 16457810
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||| | ||  |||||||||||||  ||||||||| |||||||||    
T  16457876 tgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 26078033 - 26078127
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||  | |||||||||  ||||||||||| | ||| |||| ||||||| ||  ||| ||||||||| ||||||||||||||||||||    
T  26078033 tcaaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 892482 - 892550
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||| ||||||  | ||  ||||||||||||| ||||||||||||| ||||||    
T  892482 cctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 19043526 - 19043458
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| || || |||| |||||||||| ||| |||| ||||| || ||||||||||||||||||||    
T  19043526 cctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 22737150 - 22737082
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| ||  ||||||||||||| ||| ||  ||||||||||||| ||| ||||||||||||||||    
T  22737150 cctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaacccaagtgggtt 22737082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 29075837 - 29075781
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||||||  |  ||||||||||||| ||||| ||||||||||||||    
T  29075837 aggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 16638930 - 16638815
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggcc-tgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||| ||| ||  ||||||||| || | |||||||||  | ||||| ||| | ||| ||  ||||| || |||||||||||||| |||||||    
T  16638930 gaagaagttaaattaaccctctcaaattggtataagagagaatcgaacatgagatcttgaagagaagtgcactctcaggtttcaagccaatatcattagg 16638831  T
Q  302 ccaacccaagtgggtt 317  Q
     |||||||||||||||    
T  16638830 acaacccaagtgggtt 16638815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 43442294 - 43442207
Alignment:
Q  220 ccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaac 306  Q
    |||| ||||||| || || |||||||||  ||||||||||| ||||||||||||||||||  | |||| ||||||||| || ||||||    
T  43442294 ccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 18595970 - 18596075
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    |||||||| ||  ||||||||||| || ||| |||||  ||| ||||||| |||||||||||| ||||| ||  ||||||||||||| |||  ||| |||    
T  18595970 taaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccactagatcaatcca 18596069  T
Q  310 agtggg 315  Q
    ||||||    
T  18596070 agtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 21589344 - 21589288
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||| |||| ||||||| ||  |||||||||||||  |||||||||||||||||||    
T  21589344 aggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 30735090 - 30735146
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||| || ||| |||| |||||| | |||| |||||||||||||||    
T  30735090 aggaggagcacactctcaggttacaagtcaatacgactaggtcaacccaagtgggtt 30735146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 37109320 - 37109427
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    |||||||| ||  ||||||||||| || |||||||||  ||||||||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||    
T  37109320 taaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 37109419  T
Q  310 agtgggtt 317  Q
    ||||||||    
T  37109420 agtgggtt 37109427  T

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Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 7292759 - 7292871
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  |||||||||||  | |||||||||  |||||||| || |||||||||||||||||| ||| ||||||||||||| |||     
T  7292759 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccactaga 7292858  T
Q  302 ccaacccaagtgg 314  Q
    |||||||||||||    
T  7292859 ccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 31759619 - 31759734
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggc-ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| ||||||||||| |||||||||| | || | |||||||   |||||||||| |||||||||||||||||| ||  ||||||||||||| |||     
T  31759619 gaagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaataccactaga 31759718  T
Q  302 ccaacccaagtgggtt 317  Q
     |||||||||||||||    
T  31759719 tcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 2184994 - 2185109
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||| ||  |||||||||||||  |||||||||  |||||||| || || ||||||||||||||| ||| ||||||| ||||| |||||    
T  2184994 aagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggc 2185093  T
Q  303 caaccc-aagtgggtt 317  Q
    |||||| |||||||||    
T  2185094 caacccgaagtgggtt 2185109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 46545778 - 46545711
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| ||| ||||||||||||||| || || |||||||||||||| ||||||||||||||||||||    
T  46545778 ctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 33632098 - 33632194
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccatta 299  Q
    ||||||||||||||| ||  |||||||| || || |||||||||  |||| |||||| |||||||||| |||||||| || ||||||||||||||||    
T  33632098 aagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaataccatta 33632194  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 19238588 - 19238653
Alignment:
Q  252 gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||  |||||||||||||||||| ||  |||||||||||||  |||||||||||||||||||    
T  19238588 gagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 27372618 - 27372723
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcg-gcctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||| ||| || ||||||||||||||| ||| |||||  ||| ||||||| | |||||||||| ||||| ||||||| ||||||| | ||||    
T  27372618 gaagaagctaaattaaccccttcaaattggcatcagagataatcgaacctaagaccttaaagaggagcacattcccaagtttcaaaccaatactactagg 27372717  T
Q  302 ccaacc 307  Q
    ||||||    
T  27372718 ccaacc 27372723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 4249292 - 4249176
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || ||||||||   ||||||||||| |||||||||||||||| |  |  |||||| |||||| ||||    
T  4249292 gaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactagg 4249193  T
Q  302 ccaacccaagtgggttg 318  Q
    |||| | ||||||||||    
T  4249192 ccaagcgaagtgggttg 4249176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 7949462 - 7949530
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||| | ||  ||||||||||||  ||||||| ||||||||||||    
T  7949462 cctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggtt 7949530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 19680772 - 19680864
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| || |||||||||  ||| ||||||| |||| ||||||||||||| ||  ||||| ||||||| |||||||| |||||||||||    
T  19680772 aaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaatccaagtgggtt 19680864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 38869883 - 38869783
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || || ||||||  ||||||||||| ||||||||||||||||||  |  ||||||||||||| ||||    
T  38869883 gaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaataccactagg 38869784  T
Q  302 c 302  Q
    |    
T  38869783 c 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 1730450 - 1730565
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggc-ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||||||  ||||||| ||| || ||||||| |   ||||||| || | ||||||||||||| || ||  ||||||||||||| ||||    
T  1730450 gaagaagctaaactaatcccctcaaattagcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactagg 1730549  T
Q  302 ccaacccaagtgggtt 317  Q
     |||||||||||||||    
T  1730550 tcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 8030214 - 8030280
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||||| ||  |||||| |||||| |||| ||| |||||||||||    
T  8030214 tgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 13901808 - 13901746
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||  ||||||| |||||||||| || |||||||||||||| ||| ||||||||||||    
T  13901808 tgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 296
Target Start/End: Complemental strand, 16581808 - 16581714
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaatacca 296  Q
    ||||||| |||||||| ||  ||||||||||| || ||| ||| |  ||||||||||| |||||||||| ||||||| ||| |||||||||||||    
T  16581808 gaagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaatacca 16581714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 39509138 - 39509068
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttgg 319  Q
    ||||||||||  ||||||||||||||||||  |  ||||||| |||||| || ||||||||||||||||||    
T  39509138 cctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggttgg 39509068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 317
Target Start/End: Original strand, 37274471 - 37274536
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaa-taccattaggccaacccaagtgggtt 317  Q
    ||||||| |||||||||||||||||| ||  |||||||| ||| | ||||||||||||||||||||    
T  37274471 agaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 49576902 - 49576963
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    ||||||||||| |||||||||||||||||| ||   ||||||||||||  ||||||||||||    
T  49576902 cctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaacccaa 49576963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 55427208 - 55427277
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||||  || ||||||| ||||||| ||  |||||||||||||  ||||||||||||||||||||    
T  55427208 cctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggttg 55427277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 2622379 - 2622476
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaat----accattaggccaacccaagtgggttg 318  Q
    ||||||||| || |||||||||  |||||||| |  |||||||||||||||||| ||  |||||||||    |||| |||||||||||||||||||||    
T  2622379 aaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaacccaagtgggttg 2622476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 9936981 - 9937037
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| || ||||| | |||||| ||||||||||||||| ||||    
T  9936981 aggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtt 9937037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 37720222 - 37720290
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||| |||||| |||||| ||||||||||| ||  |||||||||| ||  |||||||||||||||||||    
T  37720222 cctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 293
Target Start/End: Complemental strand, 23378071 - 23377980
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaata 293  Q
    ||||||| |||||||  ||  |||||||||||  | |||||||||  ||||||||||| |||||||||||||||||| ||  ||||||||||    
T  23378071 gaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 17618347 - 17618281
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||  | |||  ||||||||||||    
T  17618347 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaagccggcccaagtgggtt 17618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 24234711 - 24234649
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||||   || |||||||||||    
T  24234711 tgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaacccaagtg 24234649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 31826675 - 31826609
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| ||||||||||||||| ||  |  |||||| |||||| |||| |||||||||||||||    
T  31826675 tgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 40283998 - 40284060
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtggg 315  Q
    ||||||| |||||  ||||||||||| ||  |||||||||||||| | |||||||||||||||    
T  40283998 agaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 41683802 - 41683752
Alignment:
Q  264 aggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    |||||||||||| || ||| ||||||||||||| |||| ||||||||||||    
T  41683802 aggagcacactctcaggttccaagccaataccactaggtcaacccaagtgg 41683752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 51250532 - 51250598
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||| ||| ||| ||||||||||||||  |  |||||||||||||  |||||||||||||||||||    
T  51250532 tgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 15180853 - 15180741
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || |||||||||  ||| |||||||   |||||| ||||||||| ||  ||||||||||||| |||     
T  15180853 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagacctt---gaggagtacactcccaggtcccaagccaataccactaga 15180757  T
Q  302 ccaacccaagtgggtt 317  Q
    |||| | |||||||||    
T  15180756 ccaatctaagtgggtt 15180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 27965537 - 27965586
Alignment:
Q  268 gcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||  |  ||||||||||||| ||||||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggtt 27965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 28635789 - 28635696
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| || |||||||||  ||| |||||| |||||||||||||||||||  |  |||| || |||||  ||| |||||||||||||||    
T  28635789 caaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 41346983 - 41347036
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    |||||||||| |||||||  | |||| |||||||||| ||||||||||||||||    
T  41346983 aggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 43456799 - 43456832
Alignment:
Q  263 gaggagcacactcccatgtttcaagccaatacca 296  Q
    ||||||||||||| ||||||||||||||||||||    
T  43456799 gaggagcacactctcatgtttcaagccaatacca 43456832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 33756016 - 33755968
Alignment:
Q  264 aggagcacactcccatgtttcaagccaataccattaggccaacccaagt 312  Q
    ||||||||||| ||| || ||||||||| |||||||| |||||||||||    
T  33756016 aggagcacactaccaagtctcaagccaacaccattagaccaacccaagt 33755968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 44865398 - 44865334
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| |||||||||||||  | | |  ||||||||| ||||| |||||||||||||||||||    
T  44865398 agaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggccaacccaagtgggtt 44865334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 46295165 - 46295097
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||| ||||  |||||||| || |  || |||||| |||||||||    
T  46295165 cctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgggtt 46295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 47202433 - 47202473
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaa 291  Q
    ||||||||| |||||||||||||||||| ||| ||||||||    
T  47202433 tgagaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 51747900 - 51747844
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacc 307  Q
    ||||||||| ||||||||||||||| ||||| | ||| ||||||||| | |||||||    
T  51747900 tgagaccttaaggaggagcacactctcatgtcttaagtcaataccatcatgccaacc 51747844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 40416359 - 40416466
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    |||||||| || |||||||||||| || |||||||||  ||||||||||| |||||||||| ||||||| ||| |||| |||||||| ||||||||||||    
T  40416359 taaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaaccca 40416458  T
Q  310 agtgggtt 317  Q
    ||||||||    
T  40416459 agtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 42922529 - 42922414
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttc-aggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||| |||||||| ||  ||||||||||| || |||||||||  |||||||||||  |||||||||||||||||| ||| ||||||||||||| ||||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactagg 42922430  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  42922429 ccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 42327378 - 42327471
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| |  |||||||||  ||||||||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  42327378 caaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 4060175 - 4060290
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  |||||||| || || |||||||||  ||||||| ||| ||||| ||||||||| || ||||||| ||||||||| ||||    
T  4060175 gaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactagg 4060274  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  4060275 ccaacccaagtgggtt 4060290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 11062428 - 11062360
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||| |||||||||||| ||| |||||||||| || ||||||||||||||||||||    
T  11062428 cctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 29503339 - 29503271
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||  ||| ||||||||| ||||||||||||||||||||    
T  29503339 cctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 19016097 - 19016030
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||| || |||||||||||||||||    
T  19016097 tgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggttg 19016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 13803609 - 13803495
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||| ||  |||||||||||||| ||| |||||  ||||||||||| |||||||||||||||| | || ||||||||||| || |||      
T  13803609 aagaaggtaaactaaccccctcaaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaatatcactagat 13803510  T
Q  303 caacccaagtgggtt 317  Q
    |||||||| ||||||    
T  13803509 caacccaaatgggtt 13803495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 16918539 - 16918653
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| |||| |||| ||||| || ||||||||   ||| ||||||| ||||||||||||||||||  |  ||| ||||||||| ||||    
T  16918539 gaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactagg 16918638  T
Q  302 ccaacccaagtgggt 316  Q
    |||||||||||||||    
T  16918639 ccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 21195684 - 21195752
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||| |||||| |||||| |||| |||||||| ||||||    
T  21195684 cctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaacccaaatgggtt 21195752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 37480143 - 37480075
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||||||||||||| || ||  |||||||||||||  |||||||||||||||||||    
T  37480143 cctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 42602618 - 42602554
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| || ||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  42602618 agaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 19244203 - 19244108
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||||| || |||||||||  |||||||||||  |||||||||||||| || ||  |||| |||||||| ||| |||||||||||||||||    
T  19244203 tcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggttg 19244108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 1435156 - 1435060
Alignment:
Q  225 caaattggcatcatagagaatcggcctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttggtt 321  Q
    ||||||| || || |||||||||  |||||||||| ||||| |||||||||| |  |  ||||||| ||||| || |||||||||||||||||||||    
T  1435156 caaattgacaccagagagaatcgaactgagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggttggtt 1435060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 1729872 - 1729816
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  ||||||||||||| ||| ||||||||||||||||    
T  1729872 aggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggtt 1729816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 11251155 - 11251087
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||| ||| ||  ||||||||||||| || ||||||| |||||||||    
T  11251155 cctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacctaagtgggtt 11251087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 23052531 - 23052599
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||| |||||||||||| ||  |||||||||||||  ||||||||| |||||||||    
T  23052531 cctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 34041549 - 34041664
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  ||||||||||| || || |||||   ||||||||||| ||||||||||||||| ||  |   ||| |||||||| ||||    
T  34041549 gaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactagg 34041648  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  34041649 ccaacccaagtgggtt 34041664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 14500371 - 14500277
Alignment:
Q  224 tcaaattggcatcatagagaatcggc-ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || |||||||||   |||||||||  ||||||||||||||||||  | ||||||  |||||| |||||||| |||||||||||    
T  14500371 tcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtt 14500277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 7799055 - 7799111
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  |||||||||||||  ||| |||||||||||||||    
T  7799055 aggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 39715060 - 39714992
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||||||||||||||| ||  |||| ||||||||  | |||||||||||||||||    
T  39715060 cctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 4438992 - 4439055
Alignment:
Q  254 gaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| ||||||||||||||| ||  |  ||||  ||||||||||||||||||||||||||||    
T  4438992 gaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 19322883 - 19322768
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||||||| |   |||||||||||  | ||||||||   || |||||||| | |||||||||||||||| ||  ||| ||||||||| |||     
T  19322883 gaagaagttaaactaacctcctcaaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactaga 19322784  T
Q  302 ccaacccaagtgggtt 317  Q
     |||||||||||||||    
T  19322783 tcaacccaagtgggtt 19322768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 12994386 - 12994452
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||||| ||  |||| |||||||| ||| ||||| |||| |||||    
T  12994386 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 310
Target Start/End: Original strand, 23140923 - 23140981
Alignment:
Q  252 gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    ||||| || ||||||| ||||| |||||||  ||||||||||||||||| |||||||||    
T  23140923 gagacattgaggaggaacacacacccatgtcccaagccaataccattagaccaacccaa 23140981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 310
Target Start/End: Original strand, 23552713 - 23552771
Alignment:
Q  252 gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    ||||| || ||||||| ||||| |||||||  ||||||||||||||||| |||||||||    
T  23552713 gagacattgaggaggaacacacacccatgtcccaagccaataccattagaccaacccaa 23552771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 41908648 - 41908714
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||| | || |||| || | ||||  |||||||||||||||||||    
T  41908648 tgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgggtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 5147690 - 5147755
Alignment:
Q  252 gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| || ||||||| |||||||  | ||||| |||||||| ||| ||||||||||||||||    
T  5147690 gagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 29964871 - 29964822
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    ||||||||||  |||||| ||||||||||||||||| |||| ||||||||    
T  29964871 aggaggagcatgctcccaggtttcaagccaataccactaggtcaacccaa 29964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 29996443 - 29996536
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| |||||  |||||||||  ||||||||||| ||| |||| ||| || |||||| ||||| ||||||| |||||||| | |||||||||    
T  29996443 caaattagcatccgagagaatcgaacctgagaccttaaggcggagtacattcacatgttccaagctaataccactaggccaatctaagtgggtt 29996536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 33962804 - 33962857
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    ||||||||||||||||||  |  ||| |||||| ||||||||||||||||||||    
T  33962804 aggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 45026856 - 45026743
Alignment:
Q  205 agaagttaaactaatccattcaaattggcatcatagagaatcggcc-tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggcc 303  Q
    ||||| |||||||| ||  ||||||||||| || ||||||||   | ||||||||| |||||||||||||||| | ||| |||| || ||| | ||| ||    
T  45026856 agaagctaaactaaccccctcaaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcctaagttccaagtcattactaatagacc 45026757  T
Q  304 aacccaagtgggtt 317  Q
    || |||||||||||    
T  45026756 aaaccaagtgggtt 45026743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 3001435 - 3001383
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    |||||||||||||||| |  | ||||| |||||||| ||||||||||||||||    
T  3001435 aggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtg 3001383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 18259798 - 18259730
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  ||||||||||||||| ||  | ||||||||||||||  |||||||| ||| ||||||    
T  18259798 cctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 24191894 - 24191842
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||||||||| || ||  |||||||||||||| |||||||| ||||||    
T  24191894 aggaggagcacactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 26482160 - 26482093
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| || ||||||||||||| | ||  |||||||| ||||| ||||||||| |||||||||    
T  26482160 cctgagaccttgag-aggagcacactcctaggtcccaagccaacaccatcaggccaacctaagtgggtt 26482093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 29197396 - 29197452
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  |||| ||||||||  | |||||||||||||||||    
T  29197396 aggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 281
Target Start/End: Original strand, 33839268 - 33839300
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgt 281  Q
    ||||||||||| |||||||||||||||||||||    
T  33839268 cctgagaccttgaggaggagcacactcccatgt 33839300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 38551832 - 38551772
Alignment:
Q  253 agaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||| || | |||||||||||||  ||||||  |||||||||||| ||||||||||||    
T  38551832 agaccttaagaaagagcacactcccaaatttcaaatcaataccattagaccaacccaagtg 38551772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 7320764 - 7320836
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggcctgagaccttcaggaggagcacactc 275  Q
    ||||||| |||| ||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  7320764 gaagaagctaaattaacccattcaaattggcaccatagagaatcgacctgagaccttcaggaggagcacactc 7320836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 12188264 - 12188379
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| ||  |||||||||||  | |||||||||  || || ||||| |||||||||||||||||| ||  ||||||||||||| ||||    
T  12188264 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactagg 12188363  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  12188364 ccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 3779406 - 3779338
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    |||||||||| || ||||||||||||||| || |||||||||||||| |||| ||||| ||||||||||    
T  3779406 ctgagaccttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacctaagtgggttg 3779338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 33549196 - 33549104
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||  |||||||||  ||||||||||  |||||||||||||||||| ||  |||||||||||||  || ||||||||||||||||    
T  33549196 aaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 2616542 - 2616476
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| | |||||||||||| |||||  |||||| ||||||| ||||||||||||| ||||||    
T  2616542 tgagaccttgaagaggagcacacttccatgactcaagctaataccactaggccaacccaaatgggtt 2616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 7320869 - 7320903
Alignment:
Q  339 attttgggtggagtaatgaattttggggtgtcttc 373  Q
    |||||||||||||||||||||||||||||||||||    
T  7320869 attttgggtggagtaatgaattttggggtgtcttc 7320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 13330201 - 13330087
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcggc-ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||| ||  |||||||||||  | |||||||||   |||||||||| |||||||||  ||||||| |||  ||| |||||||| ||||     
T  13330201 aagaagctaaactaaccctctcaaattggcacaagagagaatcgaatctgagaccttgaggaggagcttactcccaagttcaaagtcaataccactaggt 13330102  T
Q  303 caacccaagtgggtt 317  Q
    |||||||||||||||    
T  13330101 caacccaagtgggtt 13330087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 10338182 - 10338246
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    ||||||||||| |||||||||||||||| | ||  |||||||||||||  | |||||||||||||    
T  10338182 cctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtg 10338246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 13661588 - 13661521
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||||||||||||||| || ||||||||||| || ||| |||||||| |||||||    
T  13661588 cctgagacctcgaggaggagcacactcccaagtgtcaagccaata-cactagaccaacccatgtgggtt 13661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 21418526 - 21418470
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||||||| ||  |||||||||||||  |||||||||||| ||||||    
T  21418526 aggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 24334033 - 24334101
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||| ||| | ||||  |||||||| |||||  ||||||||||||||||||    
T  24334033 cctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccatccggccaacccaagtgggtt 24334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 31622999 - 31623067
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||||||||||||||| ||  |||||||||||||   | ||||||||||||||||    
T  31622999 cctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 14199956 - 14200023
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||| |||||||||||||||||| || ||||||| |||||  |||  |||||||| ||||||    
T  14199956 ctgagaccttgaggaggagcacactcccaagtctcaagcctatacctctagagcaacccaaatgggtt 14200023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 15497063 - 15497113
Alignment:
Q  267 agcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| || ||| ||| |||||| |||||||||||||||||||||||    
T  15497063 agcacactctcaagttccaaaccaatatcattaggccaacccaagtgggtt 15497113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 19638012 - 19638081
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||||| ||  |||||||||||||| ||| || |||||||||| | | ||||| |||||||||||    
T  19638012 cctgagaccttgagctggagcacactcccaggttccacgccaataccactggaccaacgcaagtgggttg 19638081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 34293836 - 34293889
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    ||||||||||||||||||  || ||| ||||||||| |||| ||||||||||||    
T  34293836 aggaggagcacactcccaaattccaaaccaataccactaggtcaacccaagtgg 34293889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 4105119 - 4105075
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaata 293  Q
    ||||||| ||| |||||||||||||||| | ||||||||||||||    
T  4105119 cctgagatcttaaggaggagcacactcctaggtttcaagccaata 4105075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 94979 - 95044
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  94979 cctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 18540413 - 18540298
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||| ||| ||  ||||||||||| || |||||||||  ||||||||||| ||||| || ||||||||| ||  ||||||||||||| ||||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactagg 18540314  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  18540313 ccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 33017328 - 33017214
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||||||| || | |||||||||| || |||||||||  ||||||||||| |||||||||||||| ||| ||| ||||||||||  |  |||    
T  33017328 gaagaagttaaactaacccct-caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaagg 33017230  T
Q  302 ccaacccaagtgggtt 317  Q
    ||||||||||||||||    
T  33017229 ccaacccaagtgggtt 33017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 2203560 - 2203494
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtggg 315  Q
    ||||||||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 16852408 - 16852340
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  16852408 cctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 19703495 - 19703563
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||||||| ||||||||||||||||||||    
T  19703495 cctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 318
Target Start/End: Original strand, 30483845 - 30483961
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||| || ||||||||||||||||  | ||||||| |  ||||||||  | ||||||||||||||||||| |  ||||||||||||| | ||    
T  30483845 gaagaagataaattagtccattcaaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactggg 30483944  T
Q  302 ccaacccaagtgggttg 318  Q
    |||||||||||||||||    
T  30483945 ccaacccaagtgggttg 30483961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 44780122 - 44780190
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||    
T  44780122 cctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggtt 44780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 5264611 - 5264544
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||  |||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 12988542 - 12988428
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||||||| || | |||||||||| || |||| ||||  ||||| ||||| |||||||||||||| ||| ||| ||||||||||||| ||||    
T  12988542 gaagaagctaaactaacccct-caaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactagg 12988444  T
Q  302 ccaacccaagtgggtt 317  Q
    |||| |||||||||||    
T  12988443 ccaatccaagtgggtt 12988428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 3624648 - 3624582
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtggg 315  Q
    ||||||||||| | |||||||||||||||| ||  ||||||||||||| ||||||||||||||||||    
T  3624648 cctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 28783126 - 28783060
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||  | |||||||||||||||||    
T  28783126 tgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 317
Target Start/End: Complemental strand, 968454 - 968362
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||  |||||||||  ||||||||||  |||||||||||||||||| ||  |||||||||||||  |||||||| ||||||||||    
T  968454 aaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 26688933 - 26688864
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||||| |||||||||||||||| | ||  |||||||| ||||  ||||||||||||||||||||    
T  26688933 cctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttg 26688864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 11819844 - 11819776
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||  |||||| |||||| |||| |||||||| ||||||    
T  11819844 cctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 20994479 - 20994535
Alignment:
Q  262 ggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||||||||||| ||  |||| |||||||| |||||||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggttg 20994535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 23361657 - 23361725
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| ||||||||||||||||||| |  |||| ||||||||  ||| |||||||||||||||    
T  23361657 cctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 29431126 - 29431010
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    ||||||| |||| ||  ||| ||||||| ||| || |||||||||  |||||| |||  |||||||||||||||||| ||  ||||||||||||   |||    
T  29431126 gaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccagg 29431027  T
Q  302 ccaacccaagtgggttg 318  Q
    |||||||||||||||||    
T  29431026 ccaacccaagtgggttg 29431010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 4436042 - 4435979
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtg 313  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||  ||| ||||| |||||    
T  4436042 ctgagaccttgaggaggagcactctcccatgtctcaagccaataccagcaggtcaaccgaagtg 4435979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 317
Target Start/End: Complemental strand, 13129775 - 13129668
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    |||| |||||||| |||||||||| || |||||||||  ||||| ||||| ||||||||| |||||||| ||  ||| ||||| ||| | ||| ||||||    
T  13129775 taaattaatccatccaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccactgggctaaccca 13129676  T
Q  310 agtgggtt 317  Q
    ||||||||    
T  13129675 agtgggtt 13129668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 8794353 - 8794419
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtggg 315  Q
    ||||||||| | |||||||||||||| ||| ||| ||||||||||||| || ||||| |||||||||    
T  8794353 cctgagaccctgaggaggagcacacttccaggttccaagccaataccactatgccaatccaagtggg 8794419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 11518859 - 11518953
Alignment:
Q  224 tcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||| ||| |||| ||||||  ||| ||||||| |||||| | ||||||||| ||| |||||| |||||| ||||| ||||||||||||||    
T  11518859 tcaaattgacattatagtgaatcgaacctaagaccttgaggaggggtacactcccaagttccaagcctataccactaggctaacccaagtgggtt 11518953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 8059700 - 8059631
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||||||| ||||||| ||||||| ||  |  |||| ||||||||| ||||||||||||||||||||    
T  8059700 cctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggttg 8059631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 23874390 - 23874458
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  |||||| ||| | ||||| ||  ||||||||||||| ||||||||||||||||||||    
T  23874390 cctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 27750798 - 27750730
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||||||| ||  |||||| ||||||  ||| |||||||| ||||||    
T  27750798 cctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggtt 27750730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 33727881 - 33727949
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||| |||||||||||||| ||| || |||| || |||||| |||| |||||||| ||||||    
T  33727881 cctgagaccttgaggaggagcacacttccaagtctcaaacctataccactagggcaacccaaatgggtt 33727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 35826367 - 35826311
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||| || || |||||||| ||||| ||||||||||||| ||||||    
T  35826367 aggaggagcacactcacaggtctcaagccactaccactaggccaacccaattgggtt 35826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 3826798 - 3826853
Alignment:
Q  262 ggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||||||||||| ||  |  ||||||||||||| ||||||||||||||||||||    
T  3826798 ggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggtt 3826853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 6436564 - 6436631
Alignment:
Q  250 ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||  ||||||||||||||| | ||  |||||||||||||  ||| |||||||||||||||    
T  6436564 ctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 29858057 - 29858124
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggt 316  Q
    ||||||||||  |||||||||||||||||  ||  |||||||||||||  ||||||| ||||||||||    
T  29858057 cctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 33823084 - 33823146
Alignment:
Q  254 gaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    |||||| ||||||||||||||| || || ||||||||||| ||||| |||||||||| ||||||    
T  33823084 gaccttgaggaggagcacactctcaggtctcaagccaatatcatta-gccaacccaaatgggtt 33823146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 36205261 - 36205198
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgg 314  Q
    ||||||||| ||||||||||||||||||  | |||| |||||| ||| || |||||||||||||    
T  36205261 tgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 6569733 - 6569847
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcggcc-tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||| |||||||| ||  |||||||| || || |||||||||  | ||| ||||  ||||||||||||||||||  |  |||||||||| || |||||    
T  6569733 aagaagctaaactaaccccctcaaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaatatcactaggc 6569832  T
Q  303 caacccaagtgggtt 317  Q
    ||||| |||||||||    
T  6569833 caacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 11928693 - 11928807
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    ||||||||||| ||| |||| ||||||| ||||    |||||||  ||||||||||  |||||||||||||| ||| |||  || | |||||||||||||    
T  11928693 aagaagttaaattaacccatccaaattgacatcggtaagaatcgaacctgagacctcgaggaggagcacacttccaggttataaactaataccattaggc 11928792  T
Q  303 caacccaagtgggtt 317  Q
    ||| |||| ||||||    
T  11928793 caatccaaatgggtt 11928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 18897232 - 18897166
Alignment:
Q  251 tgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| |||||||||||||||  | ||  ||| |||| |||| ||||||||||||||||||||    
T  18897232 tgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 35641921 - 35641977
Alignment:
Q  261 aggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||||||||||||  | ||||||| ||||||  || ||||||||||||||||    
T  35641921 aggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggtt 35641977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 226 - 318
Target Start/End: Original strand, 15307 - 15400
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    |||||||||||  |||||||||  ||||||||||  |||||||||||||||||| ||  |||||||||||||  || |||||||||||||||||    
T  15307 aaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttg 15400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 24168 - 24052
Alignment:
Q  203 gaagaagttaaactaatccattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattagg 301  Q
    |||||||||||| ||  ||| |||||||||||||| ||| |||||  ||||| || |  | |||||||||||||| | ||  |||| |||||||||||||    
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  302 ccaacccaagtgggttg 318  Q
    |||||||||||||||||    
T  24068 ccaacccaagtgggttg 24052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 19970 - 20027
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaac 306  Q
    ||||||||||| |||||||||| ||||||| ||| ||||||||||||| |||||||||    
T  19970 cctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 41616 - 41709
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||| ||||| ||||||| |  ||||||||||  |||||||||| |||| ||  | |||||||||||||| ||||||||||||||||||||    
T  41616 caaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 13029 - 13123
Alignment:
Q  225 caaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggttg 318  Q
    ||||||| ||||  |||||||||  ||||||||||| ||||||||||||||||||  | ||||||||||||||  | ||||||| ||||| ||||    
T  13029 caaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtgagttg 13123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 310
Target Start/End: Original strand, 6927 - 6988
Alignment:
Q  249 cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaa 310  Q
    |||||||| || |||||||||||||||||  ||  ||||||||||||| |||||||||||||    
T  6927 cctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaacccaa 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 296
Target Start/End: Original strand, 25326 - 25402
Alignment:
Q  221 cattcaaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaatacca 296  Q
    ||||||||||| || || ||| |||||  ||||||||||| || ||||||||||||||| || ||||||||||||||    
T  25326 cattcaaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaatacca 25402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 317
Target Start/End: Original strand, 42504 - 42596
Alignment:
Q  226 aaattggcatcatagagaatcgg-cctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaacccaagtgggtt 317  Q
    ||||||||| || |||||||||  ||||||||  | |||||||||| |||||||  || |||| |||||||| ||||||||||||| ||||||    
T  42504 aaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

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Target: scaffold0517 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 317
Target Start/End: Original strand, 7695 - 7802
Alignment:
Q  211 taaactaatccattcaaattggcatcatagagaatcggcct-gagaccttcaggaggagcacactcccatgtttcaagccaataccattaggccaaccca 309  Q
    ||||||| ||||| |||||||||| |  | |||||||  || |||||||| ||||||||||||||  || || ||||||||||||||  || ||||||||    
T  7695 taaactagtccatccaaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaaccca 7794  T
Q  310 agtgggtt 317  Q
    ||| ||||    
T  7795 agttggtt 7802  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 81526 - 81636
Alignment:
Q  204 aagaagttaaactaatccattcaaattggcatcatagagaatcggc-ctgagaccttcaggaggagcacactcccatgtttcaagccaataccattaggc 302  Q
    |||||||||||||||  |  ||||||||||||||  ||||||||   |||||||||| |||||||||||||| |||  || ||| |||||| || ||| |    
T  81526 aagaagttaaactaactccctcaaattggcatcagggagaatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaatatcactagac 81625  T
Q  303 caacccaagtg 313  Q
    ||||| |||||    
T  81626 caaccaaagtg 81636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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