View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1204_low_67 (Length: 330)
Name: NF1204_low_67
Description: NF1204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1204_low_67 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 27 - 320
Target Start/End: Original strand, 23062844 - 23063122
Alignment:
| Q |
27 |
ccccaacccgattaggttaaacttctgccatcaaaccgatcctatcacctctcaccttcttcgttgttcctcactgtacttcgcacccaacaccttatgc |
126 |
Q |
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|||| ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||||||| |
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| T |
23062844 |
cccccacccgattaggttaaacttctgccagcaaaccgatcctataacctctcat---------------tcactgtacttcgcacgcaacaccttatgc |
23062928 |
T |
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| Q |
127 |
cacaaactatctctttcctccaacactctccacaaattataataatgacatcattataagaagatcattttaactttattctatttttcttgtccttttt |
226 |
Q |
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|||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23062929 |
cacaaactatctctttcctccaacgctcttcacaaattataggaataacatcattataagaagatcattttaactttattctatttttcttgtccttttt |
23063028 |
T |
|
| Q |
227 |
attctatatagttagatttctgttcttcgcgtccattttttcgcataaataaatttgtgcacttaattaaaaataaaactaacagaaacacaca |
320 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
23063029 |
attctatatagttagatttctgttcttcccgtccattttttcgcataaataaatttgtgcacttaattaaaaataaaactaacagaaatacaca |
23063122 |
T |
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