View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12050_high_7 (Length: 439)
Name: NF12050_high_7
Description: NF12050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12050_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 1 - 422
Target Start/End: Original strand, 47010 - 47431
Alignment:
| Q |
1 |
accacacttggttgtttactttgggaaccacacttggttcccaaatagaatacactagatattagataactatgaatattgatcgtgactttgaagagta |
100 |
Q |
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| T |
47010 |
accacacttggttgtttactttgggaaccacacttggttcccaaatagaatacactagatattagataactatgaatattgatcgtgactttgaagagta |
47109 |
T |
|
| Q |
101 |
gtttactaagtaatagtatgattacaaattaaatctcattgaaacctcaattgagatggtctcttcttgaaatagaatgatactataagagtttgtattg |
200 |
Q |
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| T |
47110 |
gtttactaagtaatagtatgattacaaattaaatctcattgaaacctcaattgagatggtctcttcttgaaatagaatgatactataagagtttgtattg |
47209 |
T |
|
| Q |
201 |
ttctgaggagtctatctgatcaagacgtgtcttcaaatatggaagattgaaaacaaaattggaagccaatggtacagttgaacattgtgcttctgtattt |
300 |
Q |
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| T |
47210 |
ttctgaggagtctatctgatcaagacgtgtcttcaaatatggaagattgaaaacaaaattggaagccaatggtacagttgaacattgtgcttctgtattt |
47309 |
T |
|
| Q |
301 |
tcacattcacctattacacactctgcagttgatttttgcatatagattttatcttgattggaatgtgaaacatattcattacttaccaagagccagggtc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47310 |
tcacattcacctattacacactctgcagttgatttttgcatatagattttatcttgattggaatgtgaaacatattcattacttaccaagagccagggtc |
47409 |
T |
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| Q |
401 |
gcggtggaagtttgtaattgct |
422 |
Q |
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| T |
47410 |
gcggtggaagtttgtaattgct |
47431 |
T |
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