View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12051_high_31 (Length: 240)
Name: NF12051_high_31
Description: NF12051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12051_high_31 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 35206596 - 35206817
Alignment:
| Q |
1 |
tcacacgacaatagcacaagaaacctattaaaccactcaacaaatgaatctctttctcttgatattgatgtttctctagttcttcgtcttggaggaattt |
100 |
Q |
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| T |
35206596 |
tcacacgacaatagcacaaaaaacctattaaaccactcaacaaatgaatctctttctcttgatattgatgtttctctagttcttcgtcttggaggaattt |
35206695 |
T |
|
| Q |
101 |
gatttctctgttacaatcaaaccaagttttgattttaagataatcaagtacttgtttgagggaatctacatcaggttcaattccttgttcgaattgattc |
200 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
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| T |
35206696 |
gatttctctgttacaatcaaaccaagttttgatttcaagataatcaagtacttgtttgatggaatctacatcaggttcaattcctagttcgaattgattc |
35206795 |
T |
|
| Q |
201 |
aaaattgagttgacgcttttgg |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
35206796 |
aaaattgagttgacgcttttgg |
35206817 |
T |
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