View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12051_low_26 (Length: 357)
Name: NF12051_low_26
Description: NF12051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12051_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 14 - 341
Target Start/End: Original strand, 32181491 - 32181818
Alignment:
| Q |
14 |
agagaacagttctgagctagcatcatatgaagctgaaggaaccagtaaccatgatgtttctgaggaacatcacattcaaaaccaatactttggaagaagt |
113 |
Q |
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| T |
32181491 |
agagaacagttctaagctagcatcatatgaagctgaaggaaccagtaaccatgatgtttctgaggaacatcacattcaaaaccaatactttggaagaagt |
32181590 |
T |
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| Q |
114 |
gggatagagtggaatttcttaccaaaactacctcaaaataactatgttgaatatctctctgaatcctcatgttatcttccaaatactaccacaacagctg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32181591 |
gggatagagtggaatttcttaccaaaactacctcaaaataactatgttgaatatctctctgaatcctcatgttatcttccaaatactgccacaacagctg |
32181690 |
T |
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| Q |
214 |
agtataatatgattgggaatagccattatcacactcttggtagtagcagcagcagtttcaatgatcctggaaaagctgattttggttttaagctgattga |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32181691 |
agtataatatgattgggaatagccattatcacactcttggtagtagcagcagcagtttcaatgatcctggaaaagctgattttggttttaagctgattga |
32181790 |
T |
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| Q |
314 |
ttcttcaagtcatgattttggtgttagg |
341 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
32181791 |
ttcttcaagtcatgattttggtgttagg |
32181818 |
T |
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