View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12051_low_27 (Length: 284)

Name: NF12051_low_27
Description: NF12051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12051_low_27
NF12051_low_27
[»] chr2 (20 HSPs)
chr2 (24-272)||(35693836-35694085)
chr2 (79-179)||(31469083-31469183)
chr2 (79-179)||(10459278-10459378)
chr2 (85-175)||(11386325-11386415)
chr2 (79-179)||(944783-944883)
chr2 (83-174)||(5713227-5713318)
chr2 (116-179)||(44726817-44726880)
chr2 (87-157)||(36597119-36597189)
chr2 (118-175)||(4592455-4592512)
chr2 (136-181)||(29291119-29291164)
chr2 (86-175)||(38935368-38935457)
chr2 (123-179)||(2884268-2884324)
chr2 (79-179)||(16180433-16180533)
chr2 (117-181)||(19924314-19924378)
chr2 (117-169)||(33615273-33615325)
chr2 (86-181)||(2949052-2949147)
chr2 (117-179)||(7932755-7932817)
chr2 (121-175)||(17437166-17437220)
chr2 (117-179)||(40823565-40823627)
chr2 (117-175)||(43398874-43398932)
[»] chr3 (12 HSPs)
chr3 (79-181)||(32221468-32221570)
chr3 (83-174)||(3956175-3956266)
chr3 (86-177)||(5307341-5307432)
chr3 (86-181)||(47783088-47783183)
chr3 (81-157)||(11256559-11256635)
chr3 (80-160)||(15282638-15282718)
chr3 (99-179)||(31280167-31280247)
chr3 (85-179)||(30806943-30807037)
chr3 (117-181)||(26914485-26914549)
chr3 (134-181)||(40905812-40905859)
chr3 (120-174)||(40955795-40955849)
chr3 (120-160)||(26439347-26439387)
[»] chr7 (10 HSPs)
chr7 (81-174)||(18731990-18732083)
chr7 (86-179)||(16866406-16866499)
chr7 (118-181)||(44816477-44816540)
chr7 (122-179)||(6803319-6803376)
chr7 (79-179)||(30794453-30794553)
chr7 (81-165)||(32652406-32652490)
chr7 (87-174)||(23971191-23971278)
chr7 (134-181)||(34515858-34515905)
chr7 (81-181)||(14773480-14773581)
chr7 (81-181)||(15223932-15224033)
[»] chr5 (18 HSPs)
chr5 (86-181)||(33669932-33670027)
chr5 (87-175)||(36058775-36058863)
chr5 (120-179)||(39030575-39030634)
chr5 (117-181)||(5727726-5727789)
chr5 (81-149)||(12619661-12619729)
chr5 (79-179)||(25467104-25467204)
chr5 (134-181)||(34252727-34252774)
chr5 (116-179)||(42324915-42324978)
chr5 (86-172)||(17234538-17234623)
chr5 (118-175)||(2424475-2424532)
chr5 (123-179)||(15119309-15119365)
chr5 (117-161)||(17858198-17858242)
chr5 (134-181)||(16500567-16500614)
chr5 (120-174)||(2884046-2884099)
chr5 (141-175)||(40898501-40898535)
chr5 (120-179)||(504136-504193)
chr5 (134-174)||(12002769-12002809)
chr5 (118-174)||(26730091-26730147)
[»] scaffold0072 (1 HSPs)
scaffold0072 (111-181)||(20392-20462)
[»] chr4 (8 HSPs)
chr4 (86-181)||(30848595-30848692)
chr4 (86-173)||(4423167-4423254)
chr4 (99-181)||(24980643-24980725)
chr4 (85-175)||(54235226-54235316)
chr4 (117-179)||(24788648-24788710)
chr4 (117-179)||(24819550-24819612)
chr4 (122-179)||(55827282-55827339)
chr4 (117-181)||(18995168-18995231)
[»] chr1 (9 HSPs)
chr1 (117-175)||(5056330-5056388)
chr1 (81-179)||(37918914-37919012)
chr1 (79-179)||(3739812-3739912)
chr1 (111-172)||(3694017-3694078)
chr1 (117-174)||(47543616-47543673)
chr1 (78-174)||(30693352-30693448)
chr1 (117-179)||(19758307-19758369)
chr1 (134-179)||(35310305-35310350)
chr1 (134-177)||(6061513-6061556)
[»] chr6 (10 HSPs)
chr6 (111-179)||(9829903-9829971)
chr6 (79-179)||(35003771-35003871)
chr6 (86-181)||(31323824-31323919)
chr6 (111-174)||(2282415-2282478)
chr6 (134-181)||(13422142-13422189)
chr6 (135-181)||(28596085-28596131)
chr6 (79-181)||(30531188-30531290)
chr6 (134-179)||(1986216-1986261)
chr6 (111-172)||(24547202-24547263)
chr6 (81-174)||(33822305-33822398)
[»] chr8 (9 HSPs)
chr8 (117-178)||(13209977-13210038)
chr8 (78-179)||(33557772-33557873)
chr8 (79-174)||(11114253-11114348)
chr8 (101-175)||(7974806-7974880)
chr8 (134-179)||(15114629-15114674)
chr8 (144-181)||(28725596-28725633)
chr8 (86-179)||(35901040-35901133)
chr8 (144-180)||(7289126-7289162)
chr8 (81-181)||(29110969-29111069)
[»] scaffold0034 (1 HSPs)
scaffold0034 (117-181)||(94956-95020)
[»] scaffold0097 (1 HSPs)
scaffold0097 (116-174)||(37928-37986)
[»] scaffold0027 (1 HSPs)
scaffold0027 (117-181)||(13184-13248)


Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 24 - 272
Target Start/End: Complemental strand, 35694085 - 35693836
Alignment:
Q  24 ggataatctttcttatatcctaactatctaaatgaccttaactacatatgctcattccgtctcaaaatataagcgaaaatggatcatcatagattgatgt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  35694085 ggataatctttcttatatcctaactatctaaatgaccttaactacatatgcaccttccgtctcaaaatataagcgaaaatgaatcatcatagattaatgt 35693986  T
Q  124 atttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttacacggatgtagaatatctcaacataacaattatgtttacgatat 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |    
T  35693985 atttgatactaattttaaaccaaatacattaatttttattgaccaatttttgattacacggatgtagaatatctcaacataaaaattatgtttacgatct 35693886  T
Q  224 ctattcaatgaaaaactaaaagggaggaactctac-ttttgcttgtgatg 272  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  35693885 ctattcaatgaaaaacaaaaagggaggaactctactttttgcttgtgatg 35693836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 31469183 - 31469083
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    |||||| |||||||||||| ||||| | ||| |  |  || ||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||    
T  31469183 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttgatacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 31469084  T
Q  179 a 179  Q
    |    
T  31469083 a 31469083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 10459378 - 10459278
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    |||||| |||||| ||||| || || | ||| ||||  |||||| || |||||| |||||| ||||||||||||||| |||| |||||||||||||||||    
T  10459378 tccgtcccaaaatgtaagcaaagattggtcaacataagttgatgcatctgatacaaattttgaaccaaatacattaacttttgttgaccaatttttgctt 10459279  T
Q  179 a 179  Q
    |    
T  10459278 a 10459278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 11386415 - 11386325
Alignment:
Q  85 tcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    ||||||||||||| ||| | ||||| ||||  |||||||||||||||| |||||| ||  ||||| |||||||||| |||| |||||||||    
T  11386415 tcaaaatataagcaaaatttgatcaacataagttgatgtatttgatacaaattttgaattaaatatattaatttttgttgatcaatttttg 11386325  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 944883 - 944783
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    ||||||||||||| ||||  |||||   ||| ||||  |||||||||||| ||| |||||| ||| ||||||||||| ||||||||| | ||||||||||    
T  944883 tccgtctcaaaatgtaagtaaaaattagtcaacataagttgatgtatttggtacaaattttgaactaaatacattaacttttattgatcgatttttgctt 944784  T
Q  179 a 179  Q
    |    
T  944783 a 944783  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 5713227 - 5713318
Alignment:
Q  83 tctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    ||||||| ||||||  ||||||||||||| || |||||||||||| |||| |||||| ||  |||||| ||||||||  |||||||| ||||    
T  5713227 tctcaaagtataagtaaaaatggatcatcttaaattgatgtatttaatacaaattttgaattaaatacgttaattttggttgaccaaatttt 5713318  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 44726817 - 44726880
Alignment:
Q  116 attgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||| |||||||||  |||||||||| |||||||||||||||| |||| |||||||| ||||    
T  44726817 attgatatatttgatataaattttaaactaaatacattaatttttgttgatcaattttttctta 44726880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 36597189 - 36597119
Alignment:
Q  87 aaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatt 157  Q
    ||||||||||| ||||| |||||  ||| |||||||||| || ||| ||||||||| ||||||||||||||    
T  36597189 aaaatataagccaaaatagatcaatatatattgatgtatctgttacaaattttaaatcaaatacattaatt 36597119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 4592512 - 4592455
Alignment:
Q  118 tgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||| ||||| | ||||||    
T  4592512 tgatgtatttgatacaaatttaaaatcaaatacattaatttttgttgacaattttttg 4592455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 29291119 - 29291164
Alignment:
Q  136 ttttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||    
T  29291119 ttttgaaccaaatatattaacttttattgaccaatttttgcttaca 29291164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 38935368 - 38935457
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    |||||||||||| ||||||  ||| ||||  ||||||||||||||||  ||||| ||| ||||||||||| |||| ||||  ||||||||    
T  38935368 caaaatataagcaaaaatgagtcaacataagttgatgtatttgatacagattttgaacaaaatacattaacttttgttgagtaatttttg 38935457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 2884324 - 2884268
Alignment:
Q  123 tatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||  |||||| |||||||||||||||||||| ||||| ||||||| ||||    
T  2884324 tatttgatataaattttgaaccaaatacattaatttttgttgacaaatttttactta 2884268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 16180433 - 16180533
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    |||||| |||||| ||||| |||||   ||| |||| |||||||||||  |||  |||||| ||||||||||||||| |||| |||||||| |||| |||    
T  16180433 tccgtcccaaaatgtaagcaaaaattagtcaacataaattgatgtattaaatataaattttgaaccaaatacattaacttttgttgaccaaattttactt 16180532  T
Q  179 a 179  Q
    |    
T  16180533 a 16180533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 19924378 - 19924314
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||||||||| ||| |||||| ||||| ||||||||| |||||||||| || |||| ||||||    
T  19924378 ttgatgtatttggtacaaattttgaaccatatacattaacttttattgactaacttttacttaca 19924314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 33615325 - 33615273
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaa 169  Q
    |||||||||||||||| |||||| || |||||| |||||| ||||||||||||    
T  33615325 ttgatgtatttgatacaaattttgaatcaaatatattaatatttattgaccaa 33615273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 2949147 - 2949052
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||||  ||||| | ||| |||| |||||||||| ||| | ||||||| ||| ||||||||||  |||| || |||||||||||||||||    
T  2949147 caaaatgtaagtaaaaataggtcaacataaattgatgtatatgacattaattttgaacaaaatacattagcttttgttaaccaatttttgcttaca 2949052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 7932817 - 7932755
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||| |||||  |||||| |||||||||| |||| |||| ||||| ||||||||||||    
T  7932817 ttgatgtatctgatataaattttgaaccaaatacgttaacttttgttgactaatttttgctta 7932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 17437166 - 17437220
Alignment:
Q  121 tgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    |||||||| ||| |||||| ||| |||||||||||||||| ||||| ||||||||    
T  17437166 tgtatttggtacaaattttgaactaaatacattaatttttgttgacaaatttttg 17437220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 40823565 - 40823627
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||||||||  ||||||||||||||||||| ||| | | |||| |||||||| ||||    
T  40823565 ttgatgtatttgatataaattttaaaccaaatacataaatgtctcttgatcaatttttactta 40823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 43398874 - 43398932
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    |||||||||||| ||| |||||| ||||||||||||||| |||| || || ||||||||    
T  43398874 ttgatgtatttggtacaaattttgaaccaaatacattaacttttgttaacaaatttttg 43398932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 32221468 - 32221570
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    |||||| |||||| ||||| ||||| ||||| |||| ||||||||||||| ||| |||||| ||||||||||||||| |||| ||||| |||||||||||    
T  32221468 tccgtcccaaaatgtaagcaaaaattgatcagcataaattgatgtatttggtacaaattttgaaccaaatacattaacttttgttgactaatttttgctt 32221567  T
Q  179 aca 181  Q
    |||    
T  32221568 aca 32221570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 3956266 - 3956175
Alignment:
Q  83 tctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    ||||||||||||| ||||||||||||| ||||  ||  | |||||||| | |||||||||| ||||||||| |||||| |||||||||||||    
T  3956266 tctcaaaatataaacgaaaatggatcaacataacttactatatttgatccaaattttaaactaaatacatttatttttgttgaccaattttt 3956175  T

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Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 5307432 - 5307341
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgct 177  Q
    |||||| ||| | ||||||||||  ||||  ||||||||| | |||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  5307432 caaaatgtaaacaaaaatggatctacatacgttgatgtatctaatacaaattttaaacgaaatccattaatttttattgaccaatttttgct 5307341  T

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Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 47783183 - 47783088
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||||||||| ||||||  ||| ||||    ||||||| |||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||||    
T  47783183 caaaatataagcaaaaatgagtcaacataagccgatgtatctgatacaaattttgaaccaaatacattaactttttttgaccaatttttacttaca 47783088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 11256635 - 11256559
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatt 157  Q
    ||||||||||||||||| |||||| || | ||||  |||||||||||||||| ||||||  | ||||||||||||||    
T  11256635 cgtctcaaaatataagcaaaaatgaattaacatatgttgatgtatttgatacaaattttggatcaaatacattaatt 11256559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 15282638 - 15282718
Alignment:
Q  80 ccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaattttt 160  Q
    ||||| |||||||||| | ||||||||||| ||||  |||||| || |||||| ||||||||| |||||||||||| ||||    
T  15282638 ccgtcccaaaatataaacaaaaatggatcaacataagttgatgaatctgatacaaattttaaatcaaatacattaactttt 15282718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 31280247 - 31280167
Alignment:
Q  99 aaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||||| |||| ||| |||||| || ||| |||||| ||||||||||||||| |||| |||| |||||||| ||||    
T  31280247 aaaatggatcaacataaattaatgtatatggtacaaattttgaaccaaatacattaaattttgttgatcaatttttactta 31280167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 30807037 - 30806943
Alignment:
Q  85 tcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||||||| ||||||| ||| ||||  ||| ||| |  ||||| ||||||  ||||| |||||||||||||||||| |||||||| ||||    
T  30807037 tcaaaatataagcaaaaatgggtcaacataagttggtgtgtgcgatacaaattttggaccaagtacattaatttttattgatcaattttttctta 30806943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 26914485 - 26914549
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||||||||  ||  |||||| ||||| |||||||||||||| |||| |||||||||||||||    
T  26914485 ttgatgtatttagtataaattttgaaccacatacattaatttttgttgatcaatttttgcttaca 26914549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 40905859 - 40905812
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  40905859 aattttgaaccaaataaattaacttttgttgaccaatttttgcttaca 40905812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 40955849 - 40955795
Alignment:
Q  120 atgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||||| |||||| |||||| ||| ||||||| ||||||||||||| ||||||||    
T  40955849 atgtatatgatacaaattttgaactaaatacaataatttttattgatcaattttt 40955795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 26439387 - 26439347
Alignment:
Q  120 atgtatttgatactaattttaaaccaaatacattaattttt 160  Q
    ||||||||||||| |||||| || |||||||||||||||||    
T  26439387 atgtatttgatacaaattttgaatcaaatacattaattttt 26439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 81 - 174
Target Start/End: Original strand, 18731990 - 18732083
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||| |||||||||||| ||||||||||| |||| |||||||||| || ||  |||||| ||||||||||||||| ||||||||||||||||||    
T  18731990 cgtcccaaaatataagcaaaaatggatcaacataaattgatgtatctggtataaattttgaaccaaatacattaacttttattgaccaattttt 18732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 16866406 - 16866499
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||||| ||||| |||||  | |  || ||||||| | ||| |||||| ||||||||||||||| |||| ||||||||||||||||||    
T  16866406 caaaatataagcaaaaattgatcaataaaagttaatgtattaggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctta 16866499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 44816540 - 44816477
Alignment:
Q  118 tgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||||||||| ||| |||||| ||||||||||||||| |||| ||| |||||||||| |||||    
T  44816540 tgatgtatttggtacaaattttgaaccaaatacattaacttttgttggccaatttttgtttaca 44816477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 6803376 - 6803319
Alignment:
Q  122 gtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||| ||| |||||||||| ||||||||||| |||| |||||||| |||||||||    
T  6803376 gtatttggtacaaattttaaactaaatacattaacttttgttgaccaaattttgctta 6803319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 30794553 - 30794453
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    ||||||||||||| ||||  ||| ||||||| |||| ||  ||||||||| ||| |||||| || |||||| ||||| |||| |||||||| |||| |||    
T  30794553 tccgtctcaaaatgtaagtaaaattggatcaacataaatgaatgtatttggtacaaattttgaatcaaatatattaaattttgttgaccaaattttactt 30794454  T
Q  179 a 179  Q
    |    
T  30794453 a 30794453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 32652406 - 32652490
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattga 165  Q
    ||||||||||| ||||  |||||   ||| |||| |||| |||||||| ||| || ||| |||||||||||||||||||||||||    
T  32652406 cgtctcaaaatgtaagtaaaaataagtcaacataaattggtgtatttggtacaaactttgaaccaaatacattaatttttattga 32652490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 23971191 - 23971278
Alignment:
Q  87 aaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    ||||||||||| |||||  ||||  |||  |||||||||||| ||| |||||| ||| ||||| ||| |||||| |||||||||||||    
T  23971191 aaaatataagcaaaaataaatcaatataagttgatgtatttggtacaaattttgaactaaatatatttatttttgttgaccaattttt 23971278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 34515858 - 34515905
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  34515858 aattttgaacaaaatacattaacttttattgaccaaattttgcttaca 34515905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 14773581 - 14773480
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaa-tttttattgaccaatttttgctta 179  Q
    ||||||||||||||||  ||||||  ||| | ||  ||||||||| |||||  |||||| ||||| ||||||||| ||||| || |||||||||| ||||    
T  14773581 cgtctcaaaatataagtaaaaatgagtcaacgtaagttgatgtatctgatataaattttgaaccacatacattaactttttgttcaccaatttttactta 14773482  T
Q  180 ca 181  Q
    ||    
T  14773481 ca 14773480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 15224033 - 15223932
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaa-tttttattgaccaatttttgctta 179  Q
    ||||||||||||||||  ||||||  ||| | ||  ||||||||| |||||  |||||| ||||| ||||||||| ||||| || |||||||||| ||||    
T  15224033 cgtctcaaaatataagtaaaaatgagtcaacgtaagttgatgtatctgatataaattttgaaccacatacattaactttttgttcaccaatttttactta 15223934  T
Q  180 ca 181  Q
    ||    
T  15223933 ca 15223932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 33669932 - 33670027
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||||| ||||||| ||| ||||  ||  ||||| || ||| |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  33669932 caaaatgtaagcaaaaatgggtcaacataagttagtgtatctggtacaaattttaaaccaaatacattaactttttttgaccaatttttgcttaca 33670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 36058863 - 36058775
Alignment:
Q  87 aaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    ||||||||||| |||| ||||||  ||| |||||| ||||| |||| ||||||||| || ||||||||||||| |||||| ||||||||    
T  36058863 aaaatataagcaaaaacggatcaatataaattgatatattttatacaaattttaaatcatatacattaattttaattgacaaatttttg 36058775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 39030634 - 39030575
Alignment:
Q  120 atgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||| ||| |||||| ||||||||||||||| |||| ||||||||||||||||||    
T  39030634 atgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctta 39030575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 5727789 - 5727726
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||||||| || ||| ||||||||||||| || |||||||||||||||||||||||| ||||||    
T  5727789 ttgatgtatctggtacaaattttaaaccaa-tatattaatttttattgaccaatttttacttaca 5727726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 12619729 - 12619661
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaata 149  Q
    ||||||||||||||||| ||||||||||| ||||  |||||||||||||||  |||||| || ||||||    
T  12619729 cgtctcaaaatataagcaaaaatggatcaacataagttgatgtatttgatataaattttgaatcaaata 12619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 25467104 - 25467204
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    ||||||||||||| ||||| ||||||||| | ||||  |||||||||  ||||  |||||| ||||| ||||||||| |||||| || |||||||| |||    
T  25467104 tccgtctcaaaatgtaagcaaaaatggattaacataagttgatgtatccgatataaattttgaaccacatacattaacttttatcgatcaatttttcctt 25467203  T
Q  179 a 179  Q
    |    
T  25467204 a 25467204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 34252774 - 34252727
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  34252774 aattttgaaccaaatacattaacttttgttgaccaatttttgcttaca 34252727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 42324915 - 42324978
Alignment:
Q  116 attgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||||||| ||  ||||||||| |||||||||||| |||| ||||||||||||| ||||    
T  42324915 attgatgtatttggtataaattttaaaacaaatacattaacttttgttgaccaatttttactta 42324978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 17234538 - 17234623
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattt 172  Q
    |||||||||||| ||||||  | || ||| ||| ||||||||| ||| |||||||||| ||||| ||||||||||||| ||||||||    
T  17234538 caaaatataagcaaaaatgagtaat-ataaattaatgtatttgctacaaattttaaacaaaatatattaatttttatttaccaattt 17234623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 2424475 - 2424532
Alignment:
Q  118 tgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    |||||||| || ||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  2424475 tgatgtatatggtacaaattttgaaccaaatacattaacttttatcgaccaatttttg 2424532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 15119365 - 15119309
Alignment:
Q  123 tatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||| |||| |||||| || |||||||||||| |||||||||| ||||||||||||    
T  15119365 tatttaatacaaattttgaatcaaatacattaagttttattgactaatttttgctta 15119309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 17858242 - 17858198
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaattttta 161  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||    
T  17858242 ttgatgtatctgatacaaattttgaaccaaatacattaattttta 17858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 16500614 - 16500567
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| |||||| ||||||||||||| |||| |||||||||||||||    
T  16500614 aattttgaaccaattacattaatttttgttgaacaatttttgcttaca 16500567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 2884099 - 2884046
Alignment:
Q  120 atgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||||||| |||| ||||||||| |||||||||||| ||||||||| ||||||||    
T  2884099 atgtatttaatacaaattttaaatcaaatacattaa-ttttattgatcaattttt 2884046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 40898535 - 40898501
Alignment:
Q  141 aaccaaatacattaatttttattgaccaatttttg 175  Q
    ||||||||||| |||||||||||||||||||||||    
T  40898535 aaccaaatacaataatttttattgaccaatttttg 40898501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 504193 - 504136
Alignment:
Q  120 atgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||||||| |||| | |||||||||  ||||||||| |||||| |||||||||||    
T  504193 atgtatttgatacaaattctgaaccaaata--ttaatttttgttgaccgatttttgctta 504136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 12002809 - 12002769
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||||||||||| ||||||||| ||||||||| ||||||||    
T  12002809 aattttaaaccatatacattaacttttattgatcaattttt 12002769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 26730091 - 26730147
Alignment:
Q  118 tgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    ||||| ||||||||| |||||| || |||||||||||| |||| || ||||||||||    
T  26730091 tgatggatttgatacaaatttttaatcaaatacattaacttttgttaaccaattttt 26730147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 20392 - 20462
Alignment:
Q  111 catagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||| ||| |||||||| |||| |||||||||||| |||| |||||||||| |||||||||||||||||||    
T  20392 cataaattaatgtatttaatacaaattttaaaccacatacgttaatttttactgaccaatttttgcttaca 20462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 30848595 - 30848692
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgat--actaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||||| ||||||||||| ||||  ||||||||| | ||  || |||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  30848595 caaaatgtaagcaaaaatggatcaacataagttgatgtatctaatgtacaaattttgaacaaaatacattaatttttgttgaccaatttttgcttaca 30848692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 4423254 - 4423167
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttt 173  Q
    |||||| ||||| |||||||||||  |||  |||||||||||| ||| |||||| || |||||| ||||||||||||||| |||||||    
T  4423254 caaaatgtaagcaaaaatggatcaatataagttgatgtatttggtacaaattttgaatcaaatatattaatttttattgatcaatttt 4423167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 24980643 - 24980725
Alignment:
Q  99 aaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||||||||| ||||  ||||||||| ||| || ||||||  || |||||||||||||||| ||||| ||||||||||||||    
T  24980643 aaaatggatcaacataagttgatgtatctgacacaaattttgtacaaaatacattaatttttgttgacaaatttttgcttaca 24980725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 54235226 - 54235316
Alignment:
Q  85 tcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    ||||||| ||||| ||||||  |||  ||| ||||||||||||  ||| |||||| ||||||||||||||| |||| |||| |||||||||    
T  54235226 tcaaaatgtaagcaaaaatgagtcaatataaattgatgtatttagtacaaattttgaaccaaatacattaacttttgttgagcaatttttg 54235316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 24788710 - 24788648
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||||||||| ||||| |||  |||||||||||||||| ||||  ||||||| ||||    
T  24788710 ttgatgtatttgatacaaatttcaaattaaatacattaatttttgttgattaatttttactta 24788648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 24819550 - 24819612
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||||||||| ||||| |||  |||||||||||||||| ||||  ||||||| ||||    
T  24819550 ttgatgtatttgatacaaatttcaaattaaatacattaatttttgttgattaatttttactta 24819612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 55827282 - 55827339
Alignment:
Q  122 gtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||| ||| || ||| ||||||||| ||||| |||| ||||||||||||||||||    
T  55827282 gtatttgctacaaaattttaaccaaatatattaacttttgttgaccaatttttgctta 55827339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 18995168 - 18995231
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||||||| || ||| |||||| ||||||||||||||| ||||||| || ||| ||||||||||    
T  18995168 ttgatgtatctg-tacaaattttgaaccaaatacattaacttttattaactaatgtttgcttaca 18995231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 5056330 - 5056388
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    |||||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  5056330 ttgatgtatttgatacaaattttgaatcaaatacgttaatttttattgaccaatttttg 5056388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 37918914 - 37919012
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||| |||||| ||||| |||||| |||| ||||  |||||||||||||||  |||||||||||||||||||| | |||| ||||| |||||| |||||    
T  37918914 cgtcccaaaatgtaagcaaaaatgaatcaacataagttgatgtatttgatataaattttaaaccaaatacattcacttttgttgacaaattttcgctta 37919012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 3739812 - 3739912
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    |||||| |||||||||||| ||||| | ||| |  |  || ||||||||| ||| |||||| ||||||||||||||| |||| |||||||||||||||||    
T  3739812 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 3739911  T
Q  179 a 179  Q
    |    
T  3739912 a 3739912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 3694017 - 3694078
Alignment:
Q  111 catagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattt 172  Q
    |||| |||||||||||| |||| |||||| || ||||||||||||||||| |||||||||||    
T  3694017 cataaattgatgtatttaatacaaattttgaatcaaatacattaatttttgttgaccaattt 3694078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 47543673 - 47543616
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||||||||||| ||| |||||| |||||||| ||||||||||| |||||||||||||    
T  47543673 ttgatgtatttggtacaaattttgaaccaaattcattaatttttgttgaccaattttt 47543616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 30693448 - 30693352
Alignment:
Q  78 ttccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||||| ||||||| ||||  |||||| |||| ||||   ||||||||||| ||| |||||| || ||||||||||||||||| |||| ||||||||    
T  30693448 ttccgtttcaaaatgtaagtaaaaatgaatcaacataatatgatgtatttggtacaaattttgaatcaaatacattaatttttgttgatcaattttt 30693352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 19758307 - 19758369
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||||| ||| |||| ||||| ||||||||||| |||| ||||||||||||| ||||    
T  19758307 ttgatgtatttggtacaaattataaactaaatacattaacttttgttgaccaatttttactta 19758369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35310305 - 35310350
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  35310305 aattttaaatcaaatacattaatttttgttgaccaatttttactta 35310350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 6061513 - 6061556
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgct 177  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||    
T  6061513 aattttaaaacaaatacattaatttttgttgaccaatatttgct 6061556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 9829971 - 9829903
Alignment:
Q  111 catagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||| ||||||||||||| ||| |||||||||| |||||||||||||||| ||||| ||||||| ||||    
T  9829971 cataaattgatgtatttggtacaaattttaaacaaaatacattaatttttgttgactaatttttactta 9829903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 35003871 - 35003771
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    ||||||| ||||| ||||| |||||| |||| ||||  ||||| |||||  ||| |||||| || |||||||||||||||||||| |||||||||| |||    
T  35003871 tccgtcttaaaatgtaagcaaaaatgaatcaacataagttgatatattttgtacaaattttgaatcaaatacattaatttttattaaccaatttttactt 35003772  T
Q  179 a 179  Q
    |    
T  35003771 a 35003771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 31323919 - 31323824
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||| ||||| ||||| | ||| ||||  ||||||||| || ||| |||||| ||| ||||||||||| |||| ||||||||||||||||||||    
T  31323919 caaaatgtaagcaaaaataggtcaacataagttgatgtatctggtacaaattttgaacaaaatacattaacttttgttgaccaatttttgcttaca 31323824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 2282478 - 2282415
Alignment:
Q  111 catagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||| ||||||||||||||||| | |||| ||| ||||||||||| |||| |||||||||||||    
T  2282478 cataaattgatgtatttgatacaatttttgaactaaatacattaacttttgttgaccaattttt 2282415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 13422189 - 13422142
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  13422189 aattttaaatcaaatacattaatttttattgagcaatttttacttaca 13422142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 28596131 - 28596085
Alignment:
Q  135 attttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||| ||||||||| |||||||||| ||||||||||||| ||||||    
T  28596131 attttgaaccaaatatattaatttttgttgaccaatttttacttaca 28596085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 30531290 - 30531188
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    |||||| |||||| ||||| ||||||  ||| ||||  |||||||||||| ||| || ||| |||||||||||| || || | ||||||  |||||||||    
T  30531290 tccgtcccaaaatgtaagcaaaaatgactcaacataagttgatgtatttggtacaaactttgaaccaaatacatcaacttatgttgacccgtttttgctt 30531191  T
Q  179 aca 181  Q
    |||    
T  30531190 aca 30531188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 1986261 - 1986216
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||| |||| |||||||||||||||||||| |||| ||||    
T  1986261 aattttaaactaaatgcattaatttttattgaccaacttttactta 1986216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 24547202 - 24547263
Alignment:
Q  111 catagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattt 172  Q
    |||| ||||||||||||||||  ||||||||||||| ||||||| || || |||||| ||||    
T  24547202 cataaattgatgtatttgatataaattttaaaccaagtacattagttcttgttgaccgattt 24547263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 33822398 - 33822305
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    ||||||||||| ||||  ||||||||| |  |||  |||||||||||||||| |||||| ||| ||||| ||||| |||| || | ||||||||    
T  33822398 cgtctcaaaatgtaagtaaaaatggattaatataagttgatgtatttgatacaaattttgaactaaatatattaacttttgttaatcaattttt 33822305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 13210038 - 13209977
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctt 178  Q
    ||||||||| |||||| |||||| ||||||||||||||| |||| |||| ||||||||||||    
T  13210038 ttgatgtatctgatacaaattttgaaccaaatacattaacttttgttgatcaatttttgctt 13209977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 33557772 - 33557873
Alignment:
Q  78 ttccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgct 177  Q
    |||| ||| ||||| ||||| ||||  ||||| ||||  || ||||||||||||| |||||| ||| ||||||||||| ||||||||| |||||||| ||    
T  33557772 ttccatcttaaaatgtaagcaaaaaatgatcaacataagtttatgtatttgatacaaattttgaactaaatacattaacttttattgatcaatttttact 33557871  T
Q  178 ta 179  Q
    ||    
T  33557872 ta 33557873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 11114348 - 11114253
Alignment:
Q  79 tccgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    |||||| |||||||||||  ||||| ||||| ||||  |||||||||||| ||  ||||||||||  ||||||||||||||| |||| ||| ||||    
T  11114348 tccgtcccaaaatataagtaaaaattgatcaacataagttgatgtatttggtataaattttaaactgaatacattaatttttgttgatcaactttt 11114253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 7974806 - 7974880
Alignment:
Q  101 aatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 175  Q
    ||||| ||| |||| ||||| ||||||| ||| |||||| |   ||||||||||| |||||||||||||||||||    
T  7974806 aatgggtcaacataaattgacgtatttggtacaaattttgacaaaaatacattaacttttattgaccaatttttg 7974880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 15114674 - 15114629
Alignment:
Q  134 aattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||| || ||||||||||||||||| ||||||||||||| ||||    
T  15114674 aattttgaatcaaatacattaatttttgttgaccaattttttctta 15114629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 28725633 - 28725596
Alignment:
Q  144 caaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  28725633 caaatacaataaattttattgaccaatttttgcttaca 28725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 35901040 - 35901133
Alignment:
Q  86 caaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgctta 179  Q
    |||||||||||| ||||||  ||| ||||  |||||||| ||  ||| |||||| | || |||||||||| |||| |||||| |||||||||||    
T  35901040 caaaatataagcaaaaatgagtcaacataagttgatgtaattagtacaaattttgagcccaatacattaacttttgttgacctatttttgctta 35901133  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 7289126 - 7289162
Alignment:
Q  144 caaatacattaatttttattgaccaatttttgcttac 180  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  7289126 caaatacattaatttttattgaccattttttgtttac 7289162  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 29111069 - 29110969
Alignment:
Q  81 cgtctcaaaatataagcgaaaatggatcatcatagattgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttac 180  Q
    ||||||||||||||| | ||||| ||||| |  |  || ||||||||| | | || |||| |||||||||||| |||| |||||||| ||| ||||||||    
T  29111069 cgtctcaaaatataaacaaaaattgatcaacgaaacttaatgtatttggttcaaaatttataccaaatacattcatttatattgacctattattgcttac 29110970  T
Q  181 a 181  Q
    |    
T  29110969 a 29110969  T

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Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 95020 - 94956
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    |||||||||||| ||| |||||| |||  |||||||||||||||||||| ||||||| |||||||    
T  95020 ttgatgtatttggtacaaattttgaacataatacattaatttttattgatcaattttcgcttaca 94956  T

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Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 37986 - 37928
Alignment:
Q  116 attgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaattttt 174  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||| ||||| |||||||    
T  37986 attgatgtatttggtataaattttaaaccaaatacattaacttttgttgactaattttt 37928  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 13248 - 13184
Alignment:
Q  117 ttgatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttgcttaca 181  Q
    ||||||||| |  ||| |||||||||||||||||||||| |||| |||| | |||||||||||||    
T  13248 ttgatgtatcttgtacaaattttaaaccaaatacattaacttttgttgatccatttttgcttaca 13184  T

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