View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12051_low_39 (Length: 221)

Name: NF12051_low_39
Description: NF12051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12051_low_39
NF12051_low_39
[»] chr4 (32 HSPs)
chr4 (15-221)||(12570095-12570301)
chr4 (15-221)||(23843559-23843758)
chr4 (34-221)||(13569608-13569792)
chr4 (77-221)||(44675767-44675912)
chr4 (95-221)||(15093926-15094053)
chr4 (84-218)||(15124996-15125130)
chr4 (74-221)||(16356792-16356938)
chr4 (74-221)||(16487917-16488064)
chr4 (74-221)||(16348504-16348650)
chr4 (77-200)||(5338841-5338964)
chr4 (77-179)||(15353188-15353290)
chr4 (76-221)||(15121642-15121786)
chr4 (77-179)||(36133844-36133945)
chr4 (76-179)||(17810394-17810496)
chr4 (76-179)||(25555638-25555741)
chr4 (76-200)||(16351709-16351833)
chr4 (76-179)||(11250442-11250545)
chr4 (76-179)||(14757304-14757406)
chr4 (74-135)||(10712639-10712700)
chr4 (74-135)||(10926409-10926470)
chr4 (74-135)||(12487494-12487555)
chr4 (74-131)||(14954433-14954490)
chr4 (74-131)||(25689653-25689710)
chr4 (79-184)||(43256038-43256141)
chr4 (74-135)||(43256339-43256400)
chr4 (76-179)||(27534148-27534250)
chr4 (74-113)||(13812966-13813005)
chr4 (74-113)||(20157407-20157446)
chr4 (62-112)||(9556638-9556688)
chr4 (76-113)||(22634369-22634406)
chr4 (76-112)||(4561282-4561318)
chr4 (76-112)||(5756886-5756922)
[»] chr8 (35 HSPs)
chr8 (15-221)||(24755795-24756001)
chr8 (15-199)||(19259443-19259627)
chr8 (16-221)||(16184802-16185008)
chr8 (15-217)||(377352-377554)
chr8 (15-221)||(21168560-21168767)
chr8 (77-221)||(19899230-19899375)
chr8 (77-221)||(19983228-19983373)
chr8 (15-221)||(21161897-21162094)
chr8 (74-200)||(20465899-20466025)
chr8 (15-221)||(17353776-17353979)
chr8 (74-221)||(30643130-30643278)
chr8 (74-221)||(17926546-17926692)
chr8 (74-221)||(15602856-15603003)
chr8 (74-221)||(16410094-16410240)
chr8 (74-221)||(15611308-15611455)
chr8 (120-216)||(23776679-23776775)
chr8 (132-220)||(21395822-21395910)
chr8 (132-220)||(21790315-21790403)
chr8 (143-221)||(19976647-19976725)
chr8 (132-220)||(21389292-21389380)
chr8 (76-179)||(20856306-20856409)
chr8 (74-160)||(22010579-22010664)
chr8 (74-135)||(21828276-21828337)
chr8 (74-135)||(14398035-14398096)
chr8 (74-179)||(16861208-16861312)
chr8 (74-131)||(18862911-18862968)
chr8 (74-135)||(21410733-21410794)
chr8 (74-135)||(21805225-21805286)
chr8 (77-123)||(39094861-39094907)
chr8 (76-112)||(19278231-19278267)
chr8 (76-112)||(21972533-21972569)
chr8 (76-112)||(21976618-21976654)
chr8 (76-112)||(22111973-22112009)
chr8 (147-179)||(39094823-39094855)
chr8 (76-112)||(43251935-43251971)
[»] chr6 (46 HSPs)
chr6 (15-214)||(15894275-15894474)
chr6 (15-221)||(21739861-21740067)
chr6 (74-221)||(18907241-18907388)
chr6 (53-221)||(19863095-19863260)
chr6 (53-221)||(19873237-19873402)
chr6 (76-221)||(25642022-25642168)
chr6 (28-221)||(22438892-22439082)
chr6 (28-221)||(22432342-22432532)
chr6 (74-221)||(21834729-21834874)
chr6 (53-221)||(22334730-22334896)
chr6 (76-179)||(20907863-20907966)
chr6 (132-221)||(16523242-16523331)
chr6 (76-179)||(17804319-17804421)
chr6 (76-179)||(19790660-19790763)
chr6 (76-179)||(22863068-22863170)
chr6 (74-160)||(18180623-18180708)
chr6 (77-179)||(23657302-23657403)
chr6 (74-135)||(16760078-16760139)
chr6 (74-135)||(31478072-31478133)
chr6 (76-168)||(22429923-22430014)
chr6 (76-179)||(14472392-14472494)
chr6 (76-179)||(25767050-25767152)
chr6 (77-167)||(27567503-27567593)
chr6 (74-135)||(1644491-1644552)
chr6 (74-115)||(16523330-16523371)
chr6 (74-131)||(22948891-22948948)
chr6 (74-131)||(22952847-22952904)
chr6 (74-135)||(23414763-23414824)
chr6 (74-131)||(23871335-23871392)
chr6 (74-131)||(23875291-23875348)
chr6 (95-184)||(27415819-27415907)
chr6 (62-135)||(27416120-27416193)
chr6 (74-135)||(27556521-27556582)
chr6 (163-219)||(15041391-15041447)
chr6 (76-179)||(18955645-18955747)
chr6 (74-160)||(22408205-22408290)
chr6 (163-220)||(31164687-31164744)
chr6 (74-120)||(14472054-14472100)
chr6 (74-120)||(18956040-18956086)
chr6 (163-220)||(16924719-16924776)
chr6 (76-112)||(1644827-1644863)
chr6 (76-112)||(8243983-8244019)
chr6 (76-112)||(11566984-11567020)
chr6 (76-112)||(19870712-19870748)
chr6 (76-112)||(23395190-23395226)
chr6 (76-112)||(23990042-23990078)
[»] scaffold0042 (1 HSPs)
scaffold0042 (16-221)||(34749-34954)
[»] chr3 (57 HSPs)
chr3 (15-221)||(15060365-15060571)
chr3 (15-217)||(16909823-16910025)
chr3 (15-217)||(15051589-15051791)
chr3 (15-200)||(16369481-16369666)
chr3 (15-221)||(14878344-14878552)
chr3 (15-214)||(23052923-23053123)
chr3 (15-221)||(17524991-17525194)
chr3 (15-221)||(23408509-23408712)
chr3 (15-145)||(12172877-12173007)
chr3 (15-221)||(23077317-23077513)
chr3 (74-221)||(322721-322868)
chr3 (74-221)||(18383756-18383903)
chr3 (74-221)||(12496388-12496534)
chr3 (74-221)||(19725751-19725898)
chr3 (74-221)||(11862923-11863070)
chr3 (74-221)||(11298368-11298514)
chr3 (76-190)||(1982681-1982794)
chr3 (61-173)||(11851698-11851810)
chr3 (77-179)||(3389817-3389919)
chr3 (77-179)||(3402837-3402939)
chr3 (77-190)||(12037823-12037936)
chr3 (76-200)||(327025-327148)
chr3 (161-221)||(15877667-15877727)
chr3 (120-217)||(856314-856411)
chr3 (76-200)||(11557245-11557369)
chr3 (76-179)||(11595020-11595123)
chr3 (76-179)||(15482785-15482887)
chr3 (76-179)||(20461382-20461484)
chr3 (76-179)||(7793231-7793333)
chr3 (76-179)||(14499450-14499552)
chr3 (80-166)||(2897718-2897803)
chr3 (53-160)||(15877947-15878051)
chr3 (76-179)||(30066071-30066173)
chr3 (76-179)||(42326074-42326177)
chr3 (130-196)||(14179624-14179690)
chr3 (76-174)||(55022992-55023089)
chr3 (74-135)||(4589035-4589096)
chr3 (74-135)||(5223182-5223243)
chr3 (74-135)||(12339584-12339645)
chr3 (74-131)||(15964755-15964812)
chr3 (74-131)||(15968679-15968736)
chr3 (74-131)||(15972603-15972660)
chr3 (74-135)||(19775551-19775612)
chr3 (74-135)||(37439898-37439959)
chr3 (76-179)||(11070193-11070295)
chr3 (76-179)||(11854858-11854960)
chr3 (74-135)||(11300692-11300753)
chr3 (74-135)||(15464983-15465044)
chr3 (76-179)||(11165411-11165513)
chr3 (76-179)||(11300393-11300495)
chr3 (74-113)||(14665531-14665570)
chr3 (76-112)||(7109823-7109859)
chr3 (76-112)||(7113758-7113794)
chr3 (76-112)||(22321789-22321825)
chr3 (76-112)||(22336844-22336880)
chr3 (76-112)||(27409592-27409628)
chr3 (76-112)||(28949849-28949885)
[»] scaffold0158 (2 HSPs)
scaffold0158 (15-217)||(2913-3115)
scaffold0158 (15-217)||(6579-6781)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-221)||(13916-14122)
[»] scaffold0311 (1 HSPs)
scaffold0311 (15-221)||(6917-7123)
[»] chr1 (31 HSPs)
chr1 (15-221)||(6151929-6152135)
chr1 (15-221)||(42865050-42865249)
chr1 (18-221)||(22831217-22831419)
chr1 (15-217)||(21022712-21022914)
chr1 (15-220)||(21714627-21714829)
chr1 (74-200)||(22449126-22449252)
chr1 (74-221)||(18181960-18182107)
chr1 (53-221)||(20091312-20091477)
chr1 (95-221)||(21787881-21788008)
chr1 (74-221)||(3472765-3472911)
chr1 (77-200)||(18393824-18393947)
chr1 (77-200)||(45310227-45310350)
chr1 (77-167)||(8761526-8761616)
chr1 (76-160)||(24783001-24783084)
chr1 (76-179)||(45489624-45489727)
chr1 (130-221)||(48603706-48603797)
chr1 (76-179)||(3704946-3705049)
chr1 (76-179)||(16080326-16080428)
chr1 (74-160)||(17678488-17678573)
chr1 (164-221)||(22468535-22468592)
chr1 (76-179)||(1010845-1010947)
chr1 (74-135)||(1925391-1925452)
chr1 (74-135)||(20229071-20229132)
chr1 (74-135)||(20924405-20924466)
chr1 (95-184)||(33797674-33797762)
chr1 (76-179)||(36819190-36819292)
chr1 (82-135)||(33797408-33797461)
chr1 (76-112)||(16375406-16375442)
chr1 (76-112)||(20228757-20228793)
chr1 (76-112)||(21407477-21407513)
chr1 (76-112)||(52639663-52639699)
[»] chr2 (34 HSPs)
chr2 (15-221)||(24673650-24673856)
chr2 (53-221)||(22758554-22758719)
chr2 (76-221)||(22740799-22740945)
chr2 (15-221)||(23038112-23038315)
chr2 (95-221)||(22798965-22799092)
chr2 (88-221)||(21918155-21918288)
chr2 (74-221)||(25963556-25963702)
chr2 (101-221)||(23019545-23019666)
chr2 (120-221)||(40622047-40622148)
chr2 (76-206)||(22811765-22811896)
chr2 (53-203)||(23103253-23103400)
chr2 (77-180)||(40428597-40428700)
chr2 (15-106)||(45678074-45678165)
chr2 (96-221)||(37524820-37524944)
chr2 (76-200)||(25961395-25961518)
chr2 (140-217)||(45677998-45678075)
chr2 (76-200)||(24174932-24175056)
chr2 (76-200)||(24655199-24655323)
chr2 (76-179)||(19688638-19688740)
chr2 (76-179)||(24735525-24735627)
chr2 (77-178)||(21327449-21327550)
chr2 (80-200)||(24716391-24716510)
chr2 (76-179)||(10101527-10101629)
chr2 (80-135)||(41531266-41531321)
chr2 (77-178)||(21318518-21318619)
chr2 (74-135)||(30345253-30345314)
chr2 (74-135)||(1283172-1283233)
chr2 (74-135)||(31344995-31345056)
chr2 (80-179)||(24870016-24870115)
chr2 (76-112)||(12901460-12901496)
chr2 (76-112)||(15477725-15477761)
chr2 (76-112)||(24649479-24649515)
chr2 (76-112)||(27601918-27601954)
chr2 (76-112)||(41530958-41530994)
[»] chr5 (37 HSPs)
chr5 (15-221)||(23501184-23501391)
chr5 (15-221)||(23201441-23201649)
chr5 (77-221)||(14079283-14079428)
chr5 (15-221)||(23512179-23512387)
chr5 (74-221)||(21366505-21366652)
chr5 (53-221)||(37724019-37724184)
chr5 (95-217)||(21873402-21873525)
chr5 (62-221)||(20805669-20805827)
chr5 (119-217)||(26704244-26704342)
chr5 (119-217)||(26973977-26974075)
chr5 (62-179)||(20767091-20767207)
chr5 (120-217)||(18769847-18769944)
chr5 (132-200)||(22032507-22032575)
chr5 (76-190)||(123176-123289)
chr5 (74-200)||(23458721-23458846)
chr5 (74-200)||(23462982-23463107)
chr5 (76-179)||(12028446-12028549)
chr5 (74-200)||(23451477-23451602)
chr5 (76-200)||(23572215-23572338)
chr5 (76-179)||(24222009-24222112)
chr5 (74-135)||(11220531-11220592)
chr5 (74-135)||(11225117-11225178)
chr5 (74-135)||(11228940-11229001)
chr5 (74-135)||(11230929-11230990)
chr5 (76-167)||(22757258-22757349)
chr5 (76-190)||(15236651-15236764)
chr5 (74-135)||(11226950-11227011)
chr5 (74-135)||(18356075-18356136)
chr5 (74-135)||(20911097-20911158)
chr5 (74-133)||(10753147-10753206)
chr5 (95-174)||(18356468-18356546)
chr5 (80-135)||(40723849-40723904)
chr5 (77-134)||(17919078-17919134)
chr5 (76-116)||(17410562-17410602)
chr5 (74-113)||(24767493-24767532)
chr5 (76-119)||(31342258-31342301)
chr5 (76-112)||(20295969-20296005)
[»] scaffold0297 (1 HSPs)
scaffold0297 (15-217)||(15512-15711)
[»] scaffold0081 (3 HSPs)
scaffold0081 (15-216)||(14745-14947)
scaffold0081 (15-216)||(23760-23962)
scaffold0081 (15-216)||(39184-39386)
[»] scaffold0671 (1 HSPs)
scaffold0671 (15-221)||(6176-6383)
[»] scaffold0035 (1 HSPs)
scaffold0035 (74-221)||(46566-46713)
[»] scaffold0043 (1 HSPs)
scaffold0043 (15-221)||(18317-18520)
[»] chr7 (42 HSPs)
chr7 (15-221)||(9703344-9703547)
chr7 (74-219)||(12321583-12321728)
chr7 (29-221)||(24054560-24054749)
chr7 (74-221)||(14430012-14430159)
chr7 (15-220)||(18154676-18154877)
chr7 (29-221)||(19649323-19649511)
chr7 (147-221)||(11880459-11880533)
chr7 (76-200)||(3271955-3272079)
chr7 (120-217)||(17137906-17138003)
chr7 (76-179)||(12318249-12318351)
chr7 (76-179)||(15605154-15605256)
chr7 (132-200)||(12187205-12187273)
chr7 (76-184)||(16583378-16583484)
chr7 (76-179)||(11312770-11312872)
chr7 (76-200)||(9446019-9446143)
chr7 (76-168)||(15580813-15580904)
chr7 (76-179)||(33229-33331)
chr7 (76-179)||(70647-70749)
chr7 (76-179)||(74756-74858)
chr7 (74-135)||(15083979-15084040)
chr7 (76-184)||(13635346-13635453)
chr7 (77-160)||(2760265-2760347)
chr7 (76-179)||(20569477-20569580)
chr7 (74-135)||(39722049-39722110)
chr7 (74-131)||(45170272-45170329)
chr7 (74-133)||(25927431-25927490)
chr7 (62-113)||(39267847-39267898)
chr7 (74-135)||(1859012-1859073)
chr7 (74-135)||(13918706-13918767)
chr7 (98-179)||(42205257-42205338)
chr7 (76-112)||(39722388-39722424)
chr7 (80-135)||(2530316-2530371)
chr7 (74-113)||(2832389-2832428)
chr7 (74-113)||(9751703-9751742)
chr7 (76-112)||(12714986-12715022)
chr7 (76-112)||(12718790-12718826)
chr7 (76-112)||(12723701-12723737)
chr7 (76-112)||(16114363-16114399)
chr7 (76-112)||(16117516-16117552)
chr7 (76-112)||(16907149-16907185)
chr7 (76-112)||(18279525-18279561)
chr7 (76-112)||(18283488-18283524)
[»] scaffold0149 (2 HSPs)
scaffold0149 (77-221)||(3877-4021)
scaffold0149 (77-221)||(8308-8452)
[»] scaffold0004 (2 HSPs)
scaffold0004 (53-221)||(69911-70076)
scaffold0004 (76-174)||(10471-10568)
[»] scaffold0220 (1 HSPs)
scaffold0220 (15-221)||(4772-4979)
[»] scaffold0031 (3 HSPs)
scaffold0031 (15-221)||(65632-65834)
scaffold0031 (76-179)||(53687-53789)
scaffold0031 (74-135)||(36348-36409)
[»] scaffold0425 (1 HSPs)
scaffold0425 (74-217)||(290-433)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-221)||(1433-1620)
[»] scaffold0111 (1 HSPs)
scaffold0111 (15-219)||(32516-32712)
[»] scaffold0101 (1 HSPs)
scaffold0101 (15-221)||(8796-8999)
[»] scaffold0139 (1 HSPs)
scaffold0139 (15-216)||(20061-20258)
[»] scaffold0174 (1 HSPs)
scaffold0174 (54-221)||(18292-18456)
[»] scaffold0037 (2 HSPs)
scaffold0037 (74-221)||(21408-21555)
scaffold0037 (74-135)||(80616-80677)
[»] scaffold0393 (1 HSPs)
scaffold0393 (74-221)||(1623-1770)
[»] scaffold0131 (1 HSPs)
scaffold0131 (15-218)||(36535-36735)
[»] scaffold0096 (1 HSPs)
scaffold0096 (95-221)||(16188-16315)
[»] scaffold0080 (1 HSPs)
scaffold0080 (74-200)||(18516-18642)
[»] scaffold0761 (1 HSPs)
scaffold0761 (74-213)||(6156-6295)
[»] scaffold0023 (2 HSPs)
scaffold0023 (101-221)||(38318-38439)
scaffold0023 (101-221)||(23506-23626)
[»] scaffold1895 (1 HSPs)
scaffold1895 (95-221)||(1066-1193)
[»] scaffold1296 (1 HSPs)
scaffold1296 (74-221)||(523-670)
[»] scaffold0555 (1 HSPs)
scaffold0555 (76-221)||(715-862)
[»] scaffold0124 (1 HSPs)
scaffold0124 (74-193)||(42752-42871)
[»] scaffold0346 (1 HSPs)
scaffold0346 (74-179)||(15216-15321)
[»] scaffold0021 (1 HSPs)
scaffold0021 (53-220)||(174882-175046)
[»] scaffold0104 (2 HSPs)
scaffold0104 (74-221)||(1960-2106)
scaffold0104 (74-221)||(9642-9788)
[»] scaffold0615 (1 HSPs)
scaffold0615 (74-217)||(1927-2071)
[»] scaffold0102 (1 HSPs)
scaffold0102 (54-221)||(48299-48464)
[»] scaffold0412 (1 HSPs)
scaffold0412 (74-221)||(6255-6401)
[»] scaffold0367 (1 HSPs)
scaffold0367 (74-221)||(1027-1173)
[»] scaffold0079 (1 HSPs)
scaffold0079 (74-221)||(44211-44357)
[»] scaffold1326 (1 HSPs)
scaffold1326 (74-177)||(1373-1476)
[»] scaffold0676 (1 HSPs)
scaffold0676 (74-200)||(4560-4686)
[»] scaffold0215 (1 HSPs)
scaffold0215 (120-221)||(27002-27103)
[»] scaffold0198 (1 HSPs)
scaffold0198 (15-191)||(23924-24094)
[»] scaffold0280 (1 HSPs)
scaffold0280 (77-200)||(19152-19275)
[»] scaffold0476 (2 HSPs)
scaffold0476 (77-179)||(5719-5820)
scaffold0476 (77-179)||(6914-7015)
[»] scaffold0184 (1 HSPs)
scaffold0184 (77-200)||(4085-4208)
[»] scaffold0015 (1 HSPs)
scaffold0015 (77-180)||(192197-192300)
[»] scaffold0574 (1 HSPs)
scaffold0574 (28-97)||(7771-7840)
[»] scaffold0210 (2 HSPs)
scaffold0210 (120-217)||(21649-21746)
scaffold0210 (120-217)||(29541-29638)
[»] scaffold0550 (1 HSPs)
scaffold0550 (76-190)||(7603-7717)
[»] scaffold0439 (2 HSPs)
scaffold0439 (77-179)||(2317-2419)
scaffold0439 (77-179)||(10177-10279)
[»] scaffold0003 (3 HSPs)
scaffold0003 (76-190)||(413921-414035)
scaffold0003 (95-184)||(71454-71542)
scaffold0003 (82-135)||(71188-71241)
[»] scaffold1124 (1 HSPs)
scaffold1124 (120-217)||(2055-2152)
[»] scaffold0171 (1 HSPs)
scaffold0171 (77-178)||(35393-35494)
[»] scaffold0017 (2 HSPs)
scaffold0017 (80-180)||(15090-15190)
scaffold0017 (80-180)||(19612-19712)
[»] scaffold1220 (1 HSPs)
scaffold1220 (74-179)||(1922-2026)
[»] scaffold0637 (1 HSPs)
scaffold0637 (76-179)||(8693-8796)
[»] scaffold0036 (1 HSPs)
scaffold0036 (76-179)||(66297-66399)
[»] scaffold0216 (1 HSPs)
scaffold0216 (74-120)||(17051-17097)
[»] scaffold0327 (1 HSPs)
scaffold0327 (110-179)||(445-514)
[»] scaffold0114 (1 HSPs)
scaffold0114 (120-200)||(7469-7549)
[»] scaffold0093 (1 HSPs)
scaffold0093 (101-175)||(4690-4764)
[»] scaffold0044 (2 HSPs)
scaffold0044 (76-179)||(13026-13128)
scaffold0044 (79-136)||(19313-19369)
[»] scaffold0001 (2 HSPs)
scaffold0001 (76-179)||(422413-422516)
scaffold0001 (76-138)||(173412-173473)
[»] scaffold0029 (5 HSPs)
scaffold0029 (76-200)||(12894-13017)
scaffold0029 (76-179)||(80834-80936)
scaffold0029 (74-135)||(80498-80559)
scaffold0029 (76-112)||(61560-61596)
scaffold0029 (76-112)||(65476-65512)
[»] scaffold0008 (1 HSPs)
scaffold0008 (74-168)||(30637-30730)
[»] scaffold0141 (1 HSPs)
scaffold0141 (74-135)||(14349-14410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (74-135)||(207764-207825)
[»] scaffold0012 (1 HSPs)
scaffold0012 (74-135)||(189639-189700)
[»] scaffold0177 (1 HSPs)
scaffold0177 (79-179)||(13369-13468)
[»] scaffold0349 (1 HSPs)
scaffold0349 (76-179)||(12544-12646)
[»] scaffold0324 (1 HSPs)
scaffold0324 (182-221)||(15642-15681)
[»] scaffold0228 (1 HSPs)
scaffold0228 (76-138)||(18555-18616)
[»] scaffold0405 (1 HSPs)
scaffold0405 (83-184)||(9542-9642)
[»] scaffold0299 (1 HSPs)
scaffold0299 (74-135)||(6798-6859)
[»] scaffold0157 (1 HSPs)
scaffold0157 (74-135)||(32922-32983)
[»] scaffold0051 (1 HSPs)
scaffold0051 (74-135)||(31002-31063)
[»] scaffold0525 (1 HSPs)
scaffold0525 (76-179)||(3757-3859)
[»] scaffold0483 (1 HSPs)
scaffold0483 (109-200)||(485-576)
[»] scaffold0342 (1 HSPs)
scaffold0342 (77-179)||(7152-7253)
[»] scaffold0293 (1 HSPs)
scaffold0293 (81-135)||(20391-20445)
[»] scaffold0109 (3 HSPs)
scaffold0109 (109-179)||(45272-45342)
scaffold0109 (74-135)||(36202-36263)
scaffold0109 (76-112)||(35891-35927)
[»] scaffold0229 (1 HSPs)
scaffold0229 (74-135)||(11763-11824)
[»] scaffold0120 (1 HSPs)
scaffold0120 (83-179)||(19899-19994)
[»] scaffold1052 (1 HSPs)
scaffold1052 (74-113)||(3035-3074)
[»] scaffold0410 (1 HSPs)
scaffold0410 (76-123)||(11511-11558)
[»] scaffold0166 (1 HSPs)
scaffold0166 (74-113)||(9990-10029)
[»] scaffold0022 (1 HSPs)
scaffold0022 (74-103)||(73725-73754)
[»] scaffold0372 (1 HSPs)
scaffold0372 (76-112)||(5049-5085)
[»] scaffold0268 (1 HSPs)
scaffold0268 (76-112)||(956-992)
[»] scaffold0028 (1 HSPs)
scaffold0028 (76-112)||(58667-58703)


Alignment Details
Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 12570095 - 12570301
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12570095 gacatcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatc 12570194  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  12570195 aacttaacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacag 12570294  T
Q  215 atcgcaa 221  Q
     ||||||    
T  12570295 gtcgcaa 12570301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 23843559 - 23843758
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  ||||||||||||||||||    || |||||||| |||||||| ||    ||||||||| ||||||||||||||| ||||||||||||    
T  23843559 gacatcacataacgatatcaaataaaagcaa----catctcaatcactcattcataac----tcaagtaatacaattaatcattaaaacacattataatc 23843650  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23843651 aacattaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgacaca 23843750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 221
Target Start/End: Original strand, 13569608 - 13569792
Alignment:
Q  34 aaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataac 132  Q
    ||||||||| |||||||| ||||||||||||||||| |    |||||||||||||||||| ||| |  |||||| ||| ||||| |||||||||||||||    
T  13569608 aaataaaagtaagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacatcatctcacatcatattcaacattaacatttcataac 13569703  T
Q  133 agcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  13569704 agcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaa 13569792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 44675767 - 44675912
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  44675767 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 44675866  T
Q  176 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||| | |||||||||||||||||||||||||||||||||||||||    
T  44675867 tacctaggggtccatctctaatcaaattatgcgacacagatcgcaa 44675912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 15093926 - 15094053
Alignment:
Q  95 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctc 193  Q
    ||||| ||||||| ||| ||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  15093926 cattatatcacatcatattcaacattaacatttcataacagcttcagagattgcagttaacttcttatataggtcacattactaaccaagggtccatctc 15094025  T
Q  194 taatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||    
T  15094026 taatcaaattatgcgacacagatcgcaa 15094053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 15125130 - 15124996
Alignment:
Q  84 atgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaa 182  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||     
T  15125130 atgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcagttaacat-ttaaaaaggtcactttactacccag 15125032  T
Q  183 gggtccatctctaatcaaattatgcgacacagatcg 218  Q
    ||||||| |||||| |||||||||||||||| ||||    
T  15125031 gggtccaactctaaacaaattatgcgacacatatcg 15124996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 16356938 - 16356792
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| ||  |||||| || |||| ||||||||| |||||| |||||||||||||| ||||||||||||    
T  16356938 atttcaagtaatgcatttaatcattaaatcacattacaaaaaacttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacatt 16356840  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  16356839 actacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaa 16356792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 16488064 - 16487917
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  |||||| |||||  || ||||||||||| ||||| ||||||    
T  16488064 atttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacagatctcaattaacatcttaaataggacacatt 16487965  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||||| | |||||| |||||||| |||||||||||    
T  16487964 actacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaa 16487917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 16348650 - 16348504
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||| |||||||||| |||||||||||||||||||| || ||||||| || || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  16348650 attttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagtttaaaa-agcttcacagatttcagttaacatcttaaataggtcacatt 16348552  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  16348551 actacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaa 16348504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 5338964 - 5338841
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||| |||||| || ||||||||||||||||||| || ||||    
T  5338964 tcaagtaatgcaattaatcaataaatcacatcataatcagcttaatggttcataacagcttctcagatttcatttaacatcttatataggtctcactact 5338865  T
Q  177 acccaagggtccatctctaatcaa 200  Q
    ||| || | |||||  ||||||||    
T  5338864 acctaatgttccattcctaatcaa 5338841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 15353290 - 15353188
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| || ||| |||||||||||||| ||||||  |||||||    
T  15353290 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacaaattccagttaacatcttagataggtttcattact 15353191  T
Q  177 acc 179  Q
    |||    
T  15353190 acc 15353188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 15121786 - 15121642
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    |||||||||||||  ||| ||||| |  |||| |||||||||| || ||| ||||| |||| || ||||||||||||||| ||||||||||||| |||||    
T  15121786 ttcaagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcagcctcacagattgcagttaacttcttatataggtctcatta 15121689  T
Q  175 ctacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||| || ||||||| ||||| ||| |||| |||||||||||||||    
T  15121688 ctacctaatggtccatgtctaaacaagttattcgacacagatcgcaa 15121642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 36133945 - 36133844
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| ||||| |    
T  36133945 tcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttcccagttaatatcttaaataggtctcattaat 36133847  T
Q  177 acc 179  Q
    |||    
T  36133846 acc 36133844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 17810394 - 17810496
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  17810394 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttaacatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 17810492  T
Q  176 tacc 179  Q
    ||||    
T  17810493 tacc 17810496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 25555638 - 25555741
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||| ||  ||||||    
T  25555638 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataagtttcattac 25555737  T
Q  176 tacc 179  Q
    ||||    
T  25555738 tacc 25555741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 16351833 - 16351709
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||| | |||| || ||| | | |||||||||| ||||||  ||||||    
T  16351833 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaaaaacttcacaaattccggctaacatcttaaataggtttcattac 16351734  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  16351733 tacctaatgttccattcctaatcaa 16351709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 11250545 - 11250442
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    |||| |||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||  || |  |||||||||||||| ||||||  ||||||    
T  11250545 ttcatgtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcataggtctcagttaacatcttaaataggtttcattac 11250446  T
Q  176 tacc 179  Q
    ||||    
T  11250445 tacc 11250442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 14757406 - 14757304
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  14757406 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 14757308  T
Q  176 tacc 179  Q
    ||||    
T  14757307 tacc 14757304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 10712639 - 10712700
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10712639 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10712700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 10926409 - 10926470
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10926409 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 12487494 - 12487555
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12487494 atttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 12487555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 14954490 - 14954433
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  14954490 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 14954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 25689653 - 25689710
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  25689653 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 25689710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 43256141 - 43256038
Alignment:
Q  79 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactac 178  Q
    ||||||||||  |||| |||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| |||    
T  43256141 aagtaatgcatataat-attatatcacattataatca-cttaacatttcacaatagcttcacagttcccagttaacatcttaaataggtctcattagtac 43256044  T
Q  179 ccaagg 184  Q
    | ||||    
T  43256043 ctaagg 43256038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 43256400 - 43256339
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  43256400 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 43256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 27534148 - 27534250
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||  | |||||| ||  |  |||||||||||| | ||||||| |||||     
T  27534148 ttcaagtaatgcaatcaatcaataaatcacattataa-caacttagcatttcaatatagcttcacaattaacagttaacatctcagataggtctcattag 27534246  T
Q  176 tacc 179  Q
    ||||    
T  27534247 tacc 27534250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 13813005 - 13812966
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  13813005 atttcaagtaatgcatttaatcattaattcacattataat 13812966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 20157446 - 20157407
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  20157446 atttcaagtaatgcatttaatcattaattcacattataat 20157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 9556638 - 9556688
Alignment:
Q  62 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||| ||| | ||||||||||||||| ||||| |||||||||||||||    
T  9556638 tcattcaatactaattcaagtaatgcaatcaatcaataaatcacattataa 9556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 22634406 - 22634369
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  22634406 ttcaagtaatgcatttaatcattaattcacattataat 22634369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 4561318 - 4561282
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  4561318 ttcaagtaatgcaatcaatcaataaatcacattataa 4561282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 5756922 - 5756886
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  5756922 ttcaagtaatgcaatcaatcaataaatcacattataa 5756886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 24755795 - 24756001
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24755795 gacatcatataaagatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatc 24755894  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  24755895 aacttaacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacag 24755994  T
Q  215 atcgcaa 221  Q
     ||||||    
T  24755995 gtcgcaa 24756001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 19259627 - 19259443
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  19259627 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatcattaaatcacattataatc 19259528  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatca 199  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  19259527 aacttaacagttcataatagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatca 19259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 16184802 - 16185008
Alignment:
Q  16 acatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatca 115  Q
    ||||||| ||| ||||| |||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  16184802 acatcatgtagagatattaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagcaatgcaattaaacattaaatcacattataatca 16184901  T
Q  116 ac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    || ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16184902 acattaacatctcatatcagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 16185001  T
Q  215 atcgcaa 221  Q
     ||||||    
T  16185002 gtcgcaa 16185008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 377352 - 377554
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  377352 gacatcatgtaaagatatcaaatagaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgcaattaatcattaaatcacattatgatc 377451  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | | || ||||||    
T  377452 agcttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaattcaagcaacacag 377551  T
Q  215 atc 217  Q
    |||    
T  377552 atc 377554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 21168767 - 21168560
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| ||    
T  21168767 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattc 21168668  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||||| |||||||||||||||||| |||||||||||    
T  21168667 aacattaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacaca 21168568  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  21168567 gatcgcaa 21168560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 19899230 - 19899375
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    |||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  19899230 tcaagtaatgaaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 19899329  T
Q  176 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19899330 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 19899375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 19983228 - 19983373
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  19983228 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 19983327  T
Q  176 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  19983328 tacccagggttccatctctaatcaaattatgcgacacagatcgcaa 19983373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 21162094 - 21161897
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||          |||| ||| ||    
T  21162094 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagtaatgcaattaa----------acatcatattc 21162005  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||||| |||||||||||||||||| ||| |||||||    
T  21162004 aacattaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacaca 21161905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 20466025 - 20465899
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  20466025 atttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacagattgcagttaacctcttatataggtcacatt 20465926  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| |||||||| || ||||||||    
T  20465925 actacctaagggtccgtccctaatcaa 20465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 17353979 - 17353776
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| |||||||||||| ||||||||||||||||| |    ||||||||||| ||| || ||| |  |||||| ||| ||    
T  17353979 gacatcatataacgatatcaaatacaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgaaatcaaacatcatctcacatcatattc 17353884  T
Q  115 aacttaa-catttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||| ||||||||||||||||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  17353883 aacataaacatttcataacagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacaca 17353784  T
Q  214 gatcgcaa 221  Q
     |||||||    
T  17353783 aatcgcaa 17353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 30643278 - 30643130
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagctt-cgcagattgcagttaacatcttatataggtcacat 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| | ||||||||||||||||||||| |||||||||||    
T  30643278 atttcaagtaatgcaattaatcattaaatcatattataatcaacttaacagttcgtaacagctttcacagattgcagttaacatcttaaataggtcacat 30643179  T
Q  173 tactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||| ||||||||| | |||||||| || ||||| |||||||||||    
T  30643178 tactacctaagggtccaaccctaatcaatttgtgcgaaacagatcgcaa 30643130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 17926692 - 17926546
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||||| |||||| || ||||||||||| ||||||||||||    
T  17926692 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacatt 17926594  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  17926593 actacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaa 17926546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 15603003 - 15602856
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcgcagattgcagttaacatcttatataggtcacat 172  Q
    ||||||||||||||| |||||||||||||||||||| |  ||||||| || ||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  15603003 atttcaagtaatgcatttaatcattaaatcacattacagacaacttagcagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacat 15602905  T
Q  173 tactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||  ||||||||| | |||||||| |||||||| |||||||||||    
T  15602904 tactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaa 15602856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 16410240 - 16410094
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| ||||||| |||||| ||||||||||||    
T  16410240 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcagttaatatcttaaataggtcacatt 16410142  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| || |||||||||||||||||    
T  16410141 actacctaagggtccaaccctaatcaatttgtgcgacacagatcgcaa 16410094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 15611455 - 15611308
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcgcagattgcagttaacatcttatataggtcacat 172  Q
    ||||||||||||||| |||||||||||||||||||| |  |||||||  | ||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  15611455 atttcaagtaatgcatttaatcattaaatcacattacagacaacttagtagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacat 15611357  T
Q  173 tactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||  ||||||||| | |||||||| |||||||| |||||||||||    
T  15611356 tactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaa 15611308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 23776775 - 23776679
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagat 216  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  23776775 aacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacctaagtgtccatctctaaccaaattatgcgacacagat 23776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 21395910 - 21395822
Alignment:
Q  132 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgca 220  Q
    ||||||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21395910 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgca 21395822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 21790403 - 21790315
Alignment:
Q  132 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgca 220  Q
    ||||||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21790403 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgca 21790315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 19976647 - 19976725
Alignment:
Q  143 attgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||| ||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  19976647 attgcagttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaa 19976725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 21389380 - 21389292
Alignment:
Q  132 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgca 220  Q
    ||||||| || ||| || ||||| || ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21389380 cagcttcacatattacaattaacttcatatattggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgca 21389292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 20856409 - 20856306
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||||||||||||||||| || || |||| || |||||||||| ||| |||||  ||| |||||||||  ||||||||||||||    
T  20856409 ttcaagtaatgcatttaatcattaaatcacattacaaacagcttagcaattcataacaggttcacagatctcagctaacatctttaataggtcacattac 20856310  T
Q  176 tacc 179  Q
    ||||    
T  20856309 tacc 20856306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 22010664 - 22010579
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||| | || |||||| ||||||||||||||    
T  22010664 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacaacctcacagatttcagttaacatctta 22010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 21828337 - 21828276
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  21828337 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 21828276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 14398096 - 14398035
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  14398096 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 14398035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 179
Target Start/End: Complemental strand, 16861312 - 16861208
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||| | |||||||||||||||||||| || |||||||||| |||| |||||| |  |||||| ||| |||| ||||| ||| ||| || |    
T  16861312 atttcaagtaatgtatttaatcattaaatcacattacaaacaacttaacagttca-aacagccttacagatttcagctaacctcttaaatatgtctcact 16861214  T
Q  174 actacc 179  Q
    ||||||    
T  16861213 actacc 16861208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 18862968 - 18862911
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  18862968 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 18862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 21410733 - 21410794
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21410733 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 21805225 - 21805286
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21805225 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 39094907 - 39094861
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 123  Q
    |||||||||||| ||||||||||||| |||||| || ||||||||||    
T  39094907 tcaagtaatgcatttaatcattaaattacattacaaacaacttaaca 39094861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 19278267 - 19278231
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19278267 ttcaagtaatgcaatcaatcaataaatcacattataa 19278231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 21972569 - 21972533
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21972569 ttcaagtaatgcaatcaatcaataaatcacattataa 21972533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 21976654 - 21976618
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21976654 ttcaagtaatgcaatcaatcaataaatcacattataa 21976618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 22111973 - 22112009
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22111973 ttcaagtaatgcaatcaatcaataaatcacattataa 22112009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 39094855 - 39094823
Alignment:
Q  147 cagttaacatcttatataggtcacattactacc 179  Q
    |||||||||||||| ||||||||||||||||||    
T  39094855 cagttaacatcttaaataggtcacattactacc 39094823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 43251935 - 43251971
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  43251935 ttcaagtaatgcaatcaatcaataaatcacattataa 43251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 8e-88; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 15894474 - 15894275
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15894474 gacatcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatc 15894375  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  15894374 aacttaacatttcataacagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacag 15894275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 21740067 - 21739861
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  21740067 gacatcatataaagatatcaaatagatgcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaagtcacattataacc 21739968  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| |||| ||| | ||| |||||||    
T  21739967 agcttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacag 21739868  T
Q  215 atcgcaa 221  Q
    |||||||    
T  21739867 atcgcaa 21739861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 18907241 - 18907388
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || |||||||||||||||||| ||||||||||||    
T  18907241 atttcaagtaatgcaattaatcattaaatcacattataatgaacttaacagttcataacagcttcacatattgcagttaacatcttaaataggtcacatt 18907340  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||||||    
T  18907341 actacctaagggtccatccctaatcaattcatgcgacacagatcgcaa 18907388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 19863095 - 19863260
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagtt 151  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||| ||||||||||||    
T  19863095 ctcaatcattcattcat----atttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagtt 19863190  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  19863191 aacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaa 19863260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 19873237 - 19873402
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagtt 151  Q
    |||||||||||||||||    |||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||| ||||||||||||    
T  19873237 ctcaatcattcattcat----atttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagtt 19873332  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  19873333 aacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaa 19873402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 25642168 - 25642022
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||| ||||  |||||||||||||| ||||||||||||| |||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcatta 25642069  T
Q  175 ctacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  25642068 ctacccaagggtccatctctaatcaaattatgcgacacagttcgcaa 25642022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 22438892 - 22439082
Alignment:
Q  28 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 126  Q
    |||||||| |||||||||| |||| || |||||||||||| | |    ||||||||||| |||||| | ||| ||||||| |||||||||  |||||| |    
T  22438892 gatatcaagtaaaagcaagtatcatcttaatcattcattcgtaa----ttcaagtaatgtaattaaactttatatcacatcataatcaacactaacatct 22438987  T
Q  127 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  22438988 cataacagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtccatctcaaatcgaattatgcgacacagatcgcaa 22439082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 22432342 - 22432532
Alignment:
Q  28 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 126  Q
    |||||||| |||||||||  |||| ||||||||||||||  | |    ||||||||||| |||||| || || ||||||| |||||||||  | |||| |    
T  22432342 gatatcaagtaaaagcaaatatcatctcaatcattcatttgtaa----ttcaagtaatgtaattaaacaatatatcacatcataatcaacactgacatct 22432437  T
Q  127 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  22432438 cataacagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaa 22432532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 21834874 - 21834729
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| || || |  |||||||| |||||| |||||||||||||| |||||||| |||    
T  21834874 atttcaagtaatacatttaatcattaaatcacattataatcaacttagcagttaa--acagcttcacagatttcagttaacatcttaaataggtcagatt 21834777  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||  ||||||||||| |||||||| |||||||| |||||||||||    
T  21834776 actactgaagggtccatccctaatcaatttatgcgaaacagatcgcaa 21834729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 22334896 - 22334730
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagt 150  Q
    ||||||||||||||||| |    |||||||| ||||||| |||||||||||||||||||  ||| | || | || ||||||||||||  |||||||||||    
T  22334896 ctcaatcattcattcataa----ttcaagtagtgcaatttaatcattaaatcacattatgttcaccatttatatctcataacagctttacagattgcagt 22334801  T
Q  151 taacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||| ||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22334800 taacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaa 22334730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 20907966 - 20907863
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||||||  ||||||||||||| ||||||  ||||||    
T  20907966 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacaattcttaacaacttcccagattctagttaacatcttaaataggtttcattac 20907867  T
Q  176 tacc 179  Q
    ||||    
T  20907866 tacc 20907863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 16523331 - 16523242
Alignment:
Q  132 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||| |||||  |||||||||||||| |||||||||||||||||| |||| |||| | |||||||| |||||||| |||||||||||    
T  16523331 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacagatcgcaa 16523242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 17804319 - 17804421
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  17804319 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 17804417  T
Q  176 tacc 179  Q
    ||||    
T  17804418 tacc 17804421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 19790763 - 19790660
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  19790763 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 19790664  T
Q  176 tacc 179  Q
    ||||    
T  19790663 tacc 19790660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 22863068 - 22863170
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  |||||||| || ||  |||||||||||||| ||||||| |||||     
T  22863068 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatacagcttcacaaataacagttaacatcttagataggtctcattag 22863166  T
Q  176 tacc 179  Q
    ||||    
T  22863167 tacc 22863170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 18180623 - 18180708
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||| || | |||||| |  |||||| ||||||||||||||    
T  18180623 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttaacagttga-aacagccttacagatttcagttaacatctta 18180708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 23657403 - 23657302
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||| ||||||||||||| || || |||||||| |||||||||| || |||||  |||||||||||| | |||| ||| ||||||    
T  23657403 tcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacatatcataacagcctcacagatctcagttaacatctcacatagatcatattact 23657305  T
Q  177 acc 179  Q
    |||    
T  23657304 acc 23657302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 16760078 - 16760139
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  16760078 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 16760139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 31478133 - 31478072
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31478133 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 22430014 - 22429923
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtc 168  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| | |||| ||| |  ||| |||||||||| |||||||    
T  22430014 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataataacttcacagttctcagctaacatcttaaataggtc 22429923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 14472392 - 14472494
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  14472392 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 14472490  T
Q  176 tacc 179  Q
    ||||    
T  14472491 tacc 14472494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 25767152 - 25767050
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||| || ||| ||| |  ||||||| |||||| ||||||| |||||     
T  25767152 ttcaagtaatgcaatcaatcaataaattacattataatc-acttagcatttcataatagtttcacagttctcagttaatatcttaaataggtctcattag 25767054  T
Q  176 tacc 179  Q
    ||||    
T  25767053 tacc 25767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 27567593 - 27567503
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggt 167  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | | |||||||| ||||||    
T  27567593 tcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagatttcggctgacatcttaaataggt 27567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 1644491 - 1644552
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1644491 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1644552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 16523371 - 16523330
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatca 115  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  16523371 atttcaggtaatgcaattaatcattaaatcacattataatca 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 22948891 - 22948948
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22948891 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22948948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 22952847 - 22952904
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22952847 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22952904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 23414763 - 23414824
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  23414763 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 23414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 23871335 - 23871392
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23871335 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 23875291 - 23875348
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23875291 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23875348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 27415907 - 27415819
Alignment:
Q  95 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagg 184  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| |||| ||||    
T  27415907 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacctaagg 27415819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 27416193 - 27416120
Alignment:
Q  62 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||||||  ||||  ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  27416193 tcattcattaatatttagagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 27416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 27556521 - 27556582
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  27556521 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 27556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 15041447 - 15041391
Alignment:
Q  163 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgc 219  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  15041447 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 15041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 18955747 - 18955645
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| | ||||||||||||| || |||| |||||||  | |||||| ||  |  |||||||||||||||||||||| |||||     
T  18955747 ttcaagtaatgcaatcaatcaatcaatcacattataaaca-cttagcatttcaatatagcttcacaattaacagttaacatcttatataggtctcattag 18955649  T
Q  176 tacc 179  Q
    ||||    
T  18955648 tacc 18955645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 22408290 - 22408205
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||  || |||||| || |||||||||||    
T  22408290 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagtctcacagatttcaattaacatctta 22408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 31164744 - 31164687
Alignment:
Q  163 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgca 220  Q
    |||||| || ||||||||| |||||||||||||||||||  ||||||||||| |||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgca 31164687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 14472054 - 14472100
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 120  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||    
T  14472054 atttcgagtaatgcatttaatcattaaatcacattacaaacaactta 14472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 18956086 - 18956040
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 120  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||    
T  18956086 atttcgagtaatgcatttaatcattaaatcacattacaaacaactta 18956040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 16924776 - 16924719
Alignment:
Q  163 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgca 220  Q
    |||||| |||||||||||| |||||||   |||||||||  |||||||||||||||||    
T  16924776 taggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgca 16924719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 1644827 - 1644863
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  1644827 ttcaagtaatgcaatcaatcaataaatcacattataa 1644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 8243983 - 8244019
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  8243983 ttcaagtaatgcaatcaatcaataaatcacattataa 8244019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 11566984 - 11567020
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  11566984 ttcaagtaatgcaatcaatcaataaatcacattataa 11567020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 19870712 - 19870748
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19870712 ttcaagtaatgcaatcaatcaataaatcacattataa 19870748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 23395190 - 23395226
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  23395190 ttcaagtaatgcaatcaatcaataaatcacattataa 23395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 23990042 - 23990078
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  23990042 ttcaagtaatgcaatcaatcaataaatcacattataa 23990078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 34954 - 34749
Alignment:
Q  16 acatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatca 115  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34954 acatcatataaagatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatca 34855  T
Q  116 acttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacaga 215  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||     
T  34854 acttaacaattcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaagg 34755  T
Q  216 tcgcaa 221  Q
    ||||||    
T  34754 tcgcaa 34749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 8e-85; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 15060365 - 15060571
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  15060365 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatcattaaatcacattataatc 15060464  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||| | |||||||||||    
T  15060465 aacttaacagttcataatagcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacag 15060564  T
Q  215 atcgcaa 221  Q
    |||||||    
T  15060565 atcgcaa 15060571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 16909823 - 16910025
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||    
T  16909823 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaataaaattaatcattaaatcacattataatc 16909922  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| | | || ||||||    
T  16909923 aacttaacaattcataaaagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaattcaagcaacacag 16910022  T
Q  215 atc 217  Q
    |||    
T  16910023 atc 16910025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 15051589 - 15051791
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||    
T  15051589 gacatcatataggaatatcaaataaaatcaagcatcaactcaatcattcattcattaacatctcaggtaatgaaattaatcattaaatcacattataatc 15051688  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    ||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| | |||||||||||    
T  15051689 aacttaacagttcataatagcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacag 15051788  T
Q  215 atc 217  Q
    |||    
T  15051789 atc 15051791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 16369481 - 16369666
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||||    
T  16369481 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatgattaaatcacattataatc 16369580  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaa 200  Q
    ||||||||| |||||||||||||| || |||| |||||||||||||||||| ||||||||||||| ||||||  ||| ||||||||    
T  16369581 aacttaacagttcataacagcttcacatattggagttaacatcttatatagatcacattactacctaagggtgtatccctaatcaa 16369666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 14878552 - 14878344
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | | |  | |||| ||| ||    
T  14878552 gacatcatataaggatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacttcatcttacatcatattc 14878453  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactaccca-agggtccatctctaatcaaattatgcgacac 212  Q
    ||| |||||||||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||| |  ||||||||||||||||||||||||||||||    
T  14878452 aacattaacatttcataatagcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacac 14878353  T
Q  213 agatcgcaa 221  Q
    |||||||||    
T  14878352 agatcgcaa 14878344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 214
Target Start/End: Complemental strand, 23053123 - 23052923
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattac-catttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||     
T  23053123 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaatcatttcaagtaatgcaattaataattaaatcacattataaa 23053024  T
Q  114 caacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||||||| ||||||||| |||||| || | |||| | |||||| || |||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  23053023 caacttaaaatttcataatagcttcacaaactgcattaaacatcctaaatagatcacattactacccaggggtccatctctaatcaagttatgcgacaca 23052924  T
Q  214 g 214  Q
    |    
T  23052923 g 23052923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 17525194 - 17524991
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  ||||||||||||||| | |||||| ||||||||||||||||| |    |||||||||||||||||| | | |  |||||| ||| ||    
T  17525194 gacatcacataacgatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtcatctcacatcatattc 17525099  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17525098 aacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 17524999  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  17524998 gatcgcaa 17524991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 23408509 - 23408712
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||| |  |||||||| ||||||||||||||| ||||||||||||||||| |    ||||||||||| |||||| ||||| ||||||| ||| ||    
T  23408509 gacatcatacaacgatatcaattaaaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgtaattaaacattatatcacatcatattc 23408604  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||  |||||| ||||||||||||| ||||||||||||||| ||| | |||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  23408605 aacactaacatctcataacagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtccatctctaatcaaattatgcgacaca 23408704  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  23408705 gatcgcaa 23408712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 12172877 - 12173007
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||| ||  ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12172877 gacatcatgtaaagatatcaaataaaagcaagtaccaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatc 12172976  T
Q  115 aacttaacatttcataacagcttcgcagatt 145  Q
    | |||||||||||||||||||||| ||||||    
T  12172977 agcttaacatttcataacagcttcacagatt 12173007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 23077513 - 23077317
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||          |||| |||| |    
T  23077513 gacatcatataaggatatcaaataaa-gcaaacatcatctcaatcattcattcattaacatttcaagtaatgcaattaa----------acatcataacc 23077425  T
Q  115 aacttaa-catttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||| ||||||||||||||||| || ||| |||| ||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  23077424 aacataaacatttcataacagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacaca 23077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 322721 - 322868
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||   ||||||||||||| ||||||||||||    
T  322721 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacacttcataacagcttcacagatcttagttaacatcttaaataggtcacatt 322820  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| | |||||||||    
T  322821 actacctaagggtccaaccctaatcaatttatgcgaaatagatcgcaa 322868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 18383903 - 18383756
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||  |||||||||||||| ||||||||||||    
T  18383903 atttcaagtaatgcaattaatcattaaatcacattaaaatcagcttaacagttcataacagcttcactgatctcagttaacatcttaaataggtcacatt 18383804  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  18383803 actacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaa 18383756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 12496388 - 12496534
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||||| |||||| |||||||||||||| ||||||||||||    
T  12496388 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacatt 12496486  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  12496487 actacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaa 12496534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 19725898 - 19725751
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||| ||| |||||| ||||| |||||||| || |||||||||    
T  19725898 atttcaagtaatgtaattaatcattaaatcacattataatcagcttaacagttcatagcagtttcacagatttcagttgacatcttaaatgggtcacatt 19725799  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  19725798 actacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaa 19725751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 11862923 - 11863070
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| |||||| ||  |||||||||| ||||||||||||    
T  11862923 atttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacagatttcaaataacatcttaaataggtcacatt 11863022  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    | |||| |||||||||   |||||||| |||| ||| |||||||||||    
T  11863023 aatacctaagggtccaatcctaatcaatttatacgaaacagatcgcaa 11863070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 11298514 - 11298368
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| ||||||| |||||| ||||||||||||    
T  11298514 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacaaatttcagttaatatcttaaataggtcacatt 11298416  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||||||||| || |||||||||||    
T  11298415 actacctaagggtccaaccctaatcaaattatgagaaacagatcgcaa 11298368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 1982794 - 1982681
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |||| || ||||||||||||||||||  |||||||||||||    
T  1982794 ttcaagtaatgcatttaatcattaaatcacattacaat-aacttaacagttcataacaacttcacatattgcagttaacatcttaattaggtcacattac 1982696  T
Q  176 tacccaagggtccat 190  Q
    |||| |||| |||||    
T  1982695 tacctaaggctccat 1982681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 11851698 - 11851810
Alignment:
Q  61 ttcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| || ||| ||| ||||||||||    
T  11851698 ttcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacaaatttcagataacatctta 11851797  T
Q  161 tataggtcacatt 173  Q
     ||||||||||||    
T  11851798 aataggtcacatt 11851810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 3389919 - 3389817
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| ||| |  |||||||||||||| |||||||||||||||    
T  3389919 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacaggtctcagttaacatcttaaataggtcacattact 3389820  T
Q  177 acc 179  Q
    |||    
T  3389819 acc 3389817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 3402939 - 3402837
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    ||||| |||||| |||||||||||||||||||| || || ||||||| ||||||| |||||| ||| |  |||||||||||||| |||||||||||||||    
T  3402939 tcaaggaatgcatttaatcattaaatcacattacaaacagcttaacaattcataatagcttcacaggtctcagttaacatcttaaataggtcacattact 3402840  T
Q  177 acc 179  Q
    |||    
T  3402839 acc 3402837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 12037936 - 12037823
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||| |||||| || | |||||| || |||| |||| || ||    
T  12037936 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcaaaatggtttcacagatttcattaaacatcctaaatagatcacgttgct 12037837  T
Q  177 acccaagggtccat 190  Q
    || || ||||||||    
T  12037836 actcaggggtccat 12037823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 327148 - 327025
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  327148 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 327050  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| |||| ||| | |||||||||    
T  327049 tacctaaggttccttttctaatcaa 327025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 15877727 - 15877667
Alignment:
Q  161 tataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaa 15877667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 856314 - 856411
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||| |||||  |||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||| | | || |||||||||    
T  856314 aacatctcatataagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatc 856411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 11557369 - 11557245
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| ||| ||||| |||| ||||||  ||||||    
T  11557369 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagctaacaccttaaataggtttcattac 11557270  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  11557269 tacctaaagttccattcctaatcaa 11557245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 11595123 - 11595020
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  11595123 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 11595024  T
Q  176 tacc 179  Q
    ||||    
T  11595023 tacc 11595020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 15482785 - 15482887
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  15482785 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 15482883  T
Q  176 tacc 179  Q
    ||||    
T  15482884 tacc 15482887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 20461484 - 20461382
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  20461484 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 20461386  T
Q  176 tacc 179  Q
    ||||    
T  20461385 tacc 20461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 7793333 - 7793231
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| |||||  |||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  7793333 ttcaagtaatgcaatcaatcaacaaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 7793235  T
Q  176 tacc 179  Q
    ||||    
T  7793234 tacc 7793231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 14499450 - 14499552
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| ||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  14499450 ttcaagtaatgcaatcaatcaataaatcacattataaacaa-ttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 14499548  T
Q  176 tacc 179  Q
    ||||    
T  14499549 tacc 14499552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 2897803 - 2897718
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatatagg 166  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  |||||||||||||| |||||    
T  2897803 agtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttaacagttaacatcttaaatagg 2897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 15878051 - 15877947
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||| |    ||||||||||| |||||||||||| ||||||| ||| |||||  |||||| |||||||| | || ||||||||||||    
T  15878051 ctcaatcattcattcataa----ttcaagtaatgaaattaatcattatatcacatcatattcaacactaacatctcataacaacatcacagattgcagtt 15877956  T
Q  152 aacatctta 160  Q
    ||| |||||    
T  15877955 aacttctta 15877947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 30066071 - 30066173
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  30066071 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 30066169  T
Q  176 tacc 179  Q
    ||||    
T  30066170 tacc 30066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 42326074 - 42326177
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || ||| |||||| ||| ||||| |||| ||  |  |||||||||||||| ||||||  ||||||    
T  42326074 ttcaagtaatgcatttaatcgttaaatcacattacaaacaagttaacagttcttaacaacttcacaagtctcagttaacatcttaaataggtttcattac 42326173  T
Q  176 tacc 179  Q
    ||||    
T  42326174 tacc 42326177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 14179624 - 14179690
Alignment:
Q  130 aacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaa 196  Q
    ||||||||| ||||||  | ||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  14179624 aacagcttcacagattataattaacttcttatataggtcacaatactacccaggggtccatctctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 55022992 - 55023089
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||    
T  55022992 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcatta 55023089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 4589096 - 4589035
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  4589096 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 4589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 5223182 - 5223243
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  5223182 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 5223243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 12339584 - 12339645
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12339584 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 12339645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 15964755 - 15964812
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15964755 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 15968679 - 15968736
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15968679 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15968736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 15972603 - 15972660
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15972603 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15972660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 19775551 - 19775612
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  19775551 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 19775612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 37439959 - 37439898
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  37439959 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 37439898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 11070193 - 11070295
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| ||||||   | |||||| || ||  |||||||||||||| ||||||| |||||     
T  11070193 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcgatatagcttcacaaataacagttaacatcttagataggtctcattag 11070291  T
Q  176 tacc 179  Q
    ||||    
T  11070292 tacc 11070295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 11854858 - 11854960
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| ||  |  |||||||||||||| ||||||| |||||     
T  11854858 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaattaacagttaacatcttagataggtctcattag 11854956  T
Q  176 tacc 179  Q
    ||||    
T  11854957 tacc 11854960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 11300753 - 11300692
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||| |||| || ||||||| || |||||||||||    
T  11300753 atttcgagtaatgcatttaatcattaaatcaaattacaaacaacttagcagttcataacagc 11300692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 15464983 - 15465044
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  15464983 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 15465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 11165513 - 11165411
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||  |||||||  | || ||| || ||  |||||||||||||| ||||||| |||||     
T  11165513 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttggcatttcaatatagtttcacaaataacagttaacatcttagataggtctcattag 11165415  T
Q  176 tacc 179  Q
    ||||    
T  11165414 tacc 11165411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 11300495 - 11300393
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||  ||  |  |||||||||||||| ||||||| |||||     
T  11300495 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagctttacaattaacagttaacatcttagataggtctcattag 11300397  T
Q  176 tacc 179  Q
    ||||    
T  11300396 tacc 11300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 14665531 - 14665570
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  14665531 atttcaagtaatgcatttaatcattaattcacattataat 14665570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 7109823 - 7109859
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  7109823 ttcaagtaatgcaatcaatcaataaatcacattataa 7109859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 7113758 - 7113794
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  7113758 ttcaagtaatgcaatcaatcaataaatcacattataa 7113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 22321789 - 22321825
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22321789 ttcaagtaatgcaatcaatcaataaatcacattataa 22321825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 22336844 - 22336880
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22336844 ttcaagtaatgcaatcaatcaataaatcacattataa 22336880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 27409628 - 27409592
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  27409628 ttcaagtaatgcaatcaatcaataaatcacattataa 27409592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 28949849 - 28949885
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  28949849 ttcaagtaatgcaatcaatcaataaatcacattataa 28949885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 2913 - 3115
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2913 gacatcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatc 3012  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||| ||| ||||| | |||||||| |||||||||||||    
T  3013 agcttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacag 3112  T
Q  215 atc 217  Q
    |||    
T  3113 atc 3115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 6579 - 6781
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6579 gacatcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatc 6678  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||| ||| ||||| | |||||||| |||||||||||||    
T  6679 agcttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacag 6778  T
Q  215 atc 217  Q
    |||    
T  6779 atc 6781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 14122 - 13916
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  14122 gacatcatataaagatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaattcaattaatcattaaatcacattataatc 14023  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||  ||||||||||||||||| |||||||  || |||||||||||||    
T  14022 aacttaacatttcataacagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacag 13923  T
Q  215 atcgcaa 221  Q
     ||||||    
T  13922 gtcgcaa 13916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 7123 - 6917
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||| |  ||||||||||| | ||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  7123 gacatcatacaaagatatcaaatagaggcaaatatcaactcaatcattcattcattaacatctcaagtaatgcaattaatcattaaatctcattataatc 7024  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| | |||||||||||    
T  7023 agcttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacag 6924  T
Q  215 atcgcaa 221  Q
    |||||||    
T  6923 atcgcaa 6917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 7e-73; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 6151929 - 6152135
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||   |||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |    
T  6151929 gacatcatataaatatatcaaatagaagcaagtatcaactcaatcattcattcactaacatttcaagtaatgcaattaatcattaaatcacattataaac 6152028  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| |||||||| | |||||||||||    
T  6152029 agcttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacag 6152128  T
Q  215 atcgcaa 221  Q
    |||||||    
T  6152129 atcgcaa 6152135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 42865249 - 42865050
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  ||||||||||||||||||    || |||||||| |||||||| ||    ||||||||||||||||||||||||||||||||||||||    
T  42865249 gacatcacataacgatatcaaataaaagcaa----catctcaatcactcattcataac----tcaagtaatgcaattaatcattaaatcacattataatc 42865158  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42865157 aacattaacctttcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 42865058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 22831419 - 22831217
Alignment:
Q  18 atcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac 117  Q
    ||||||||  ||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  22831419 atcatataaagatatcaaatagaagcaagtatcaactcagtcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagc 22831320  T
Q  118 ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
     |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| |||| ||| | ||||||||||||||    
T  22831319 -taacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatc 22831221  T
Q  218 gcaa 221  Q
    ||||    
T  22831220 gcaa 22831217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 21022712 - 21022914
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  || |||||||| ||||||| |||||||||||||| |||| ||||  ||||||||||||||||||||||||||| |||||||||||||    
T  21022712 gacatcatataaagacatcaaatagaagcaagtatcaactcaatcatccattaattaatatttcaagtaatgcaattaatcattaattcacattataatc 21022811  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| | || ||||||    
T  21022812 agcttaacagttcataatagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaatcaagcaacacag 21022911  T
Q  215 atc 217  Q
    |||    
T  21022912 atc 21022914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 21714627 - 21714829
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||| |||||| || ||||||||||||||||| |    |||||||||||||||||| ||||| ||||||| ||| ||    
T  21714627 gacatcatataacgatatcaaataaaaacaagcaacatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattc 21714722  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||  |||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  21714723 aacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacaca 21714822  T
Q  214 gatcgca 220  Q
    |||||||    
T  21714823 gatcgca 21714829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 22449252 - 22449126
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  22449252 atttcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataacagcttcacagattgcagttaacatcttatatatgtcacatt 22449153  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| ||||||||||  ||||||||    
T  22449152 actacctaagggtccattcctaatcaa 22449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 18182107 - 18181960
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||||||| ||||||| | ||||||||    
T  18182107 atttcaagtaatgcaattaatcattgaatcacattataaacaacttagcatctcataacagcttcacagtttgcagttaacttcttatacaagtcacatt 18182008  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  18182007 actacctaagagtccatccctaatcaatttatgcgacacagatcgcaa 18181960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 20091477 - 20091312
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaa-ttaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagt 150  Q
    |||||||||||||||||    | |||||||  ||||| |||||||||||| ||||| ||| ||||| |||||||  | |||||||||| |||||||||||    
T  20091477 ctcaatcattcattcat----aattcaagtcgtgcaatttaatcattaaa-cacatcatattcaacattaacatcacgtaacagcttcacagattgcagt 20091383  T
Q  151 taacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||| ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20091382 taacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaa 20091312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 21788008 - 21787881
Alignment:
Q  95 cattaaatcacattataatcaactt-aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctc 193  Q
    ||||| || |||| ||||||||| | ||||||||||||||||| |  |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  21788008 cattatataacatcataatcaacatcaacatttcataacagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctc 21787909  T
Q  194 taatcaaattatgcgacacagatcgcaa 221  Q
    ||| ||| ||||||||||||| ||||||    
T  21787908 taaacaagttatgcgacacaggtcgcaa 21787881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 3472911 - 3472765
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||| || |||||||||||||||||||  || ||||||| ||||||||||||||||| |||||| |  ||||||||||| ||||||||||||    
T  3472911 atttcaagtaattcatttaatcattaaatcacatttcaaacaacttagcatttcataacagcttcacagattcccattaacatctta-ataggtcacatt 3472813  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||| ||||| | |||||||  || ||||| |||||||||||    
T  3472812 actacctaagagtccaaccctaatcagtttgtgcgaaacagatcgcaa 3472765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 18393947 - 18393824
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  18393947 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattact 18393848  T
Q  177 acccaagggtccatctctaatcaa 200  Q
    ||| || | |||||  ||||||||    
T  18393847 acctaaagttccattcctaatcaa 18393824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 45310350 - 45310227
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    ||||| |||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||||| ||||| |||||||||    
T  45310350 tcaagcaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggccacattact 45310251  T
Q  177 acccaagggtccatctctaatcaa 200  Q
    ||| || | |||||  ||||||||    
T  45310250 acctaaagttccattcctaatcaa 45310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 8761616 - 8761526
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggt 167  Q
    |||||||||||||||||||| |||||||||| ||||| | ||||| | |||||||||||||| |||||| || ||||||||||||||||||    
T  8761616 tcaagtaatgcaattaatcaataaatcacatcataattagcttaatagttcataacagcttcacagatttcatttaacatcttatataggt 8761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 24783084 - 24783001
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||  || ||||||||||||||    
T  24783084 ttcaagtaatgcaattaattaataaatcacattataatc-acttagcatttcataacagcttcacaattttcagttaacatctta 24783001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 45489727 - 45489624
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  45489727 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 45489628  T
Q  176 tacc 179  Q
    ||||    
T  45489627 tacc 45489624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 48603706 - 48603797
Alignment:
Q  130 aacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||| ||||||  | ||||| |||||||||||||||| ||||||| | |||||||||||||||||| | |||| |||||||||||||    
T  48603706 aacagcttcacagattataattaacttcttatataggtcacaatactacctaggggtccatctctaatcaattcatgcaacacagatcgcaa 48603797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 3705049 - 3704946
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||| | ||| ||||| |||| |||||| | | |||||||||| ||||||  ||||||    
T  3705049 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 3704950  T
Q  176 tacc 179  Q
    ||||    
T  3704949 tacc 3704946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 16080428 - 16080326
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  |||||||  ||||| ||||||| |||||     
T  16080428 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttcacagttctcagttaatctcttaaataggtctcattag 16080330  T
Q  176 tacc 179  Q
    ||||    
T  16080329 tacc 16080326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 17678573 - 17678488
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    ||||||||||||||| ||||||||||||| |||||| || |||||||||| |||| |||||| |  |||||| ||||||||||||||    
T  17678573 atttcaagtaatgcatttaatcattaaataacattacaaacaacttaacagttca-aacagccttacagatttcagttaacatctta 17678488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 22468592 - 22468535
Alignment:
Q  164 aggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  22468592 aggtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaa 22468535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 1010845 - 1010947
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  1010845 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 1010943  T
Q  176 tacc 179  Q
    ||||    
T  1010944 tacc 1010947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 1925452 - 1925391
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1925452 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1925391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 20229132 - 20229071
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20229132 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20229071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 20924466 - 20924405
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20924466 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20924405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 33797674 - 33797762
Alignment:
Q  95 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagg 184  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| |||| ||||    
T  33797674 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacctaagg 33797762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 36819292 - 36819190
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    |||||| |||||||| ||| | ||||||||| |||||||| ||||||||||||||| |||||| ||| |  || |||| |||||| ||||||| |||||     
T  36819292 ttcaagaaatgcaatcaataaataaatcacaatataatca-cttaacatttcataaaagcttcacagttctcatttaatatcttaaataggtctcattag 36819194  T
Q  176 tacc 179  Q
    ||||    
T  36819193 tacc 36819190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 33797408 - 33797461
Alignment:
Q  82 taatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  33797408 taatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 33797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 16375442 - 16375406
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16375442 ttcaagtaatgcaatcaatcaataaatcacattataa 16375406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 20228793 - 20228757
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  20228793 ttcaagtaatgcaatcaatcaataaatcacattataa 20228757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 21407477 - 21407513
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21407477 ttcaagtaatgcaatcaatcaataaatcacattataa 21407513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 52639663 - 52639699
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  52639663 ttcaagtaatgcaatcaatcaataaatcacattataa 52639699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 24673650 - 24673856
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  24673650 gacatcatataaagatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacagtataatc 24673749  T
Q  115 aacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 214  Q
    | ||||||||||||||| |||||| ||||| ||| |||||||| ||||||||||||||||||||  ||| ||||| | |||||||| |||||||||||||    
T  24673750 agcttaacatttcataatagcttcacagatcgcaattaacatcctatataggtcacattactacttaagagtccaaccctaatcaatttatgcgacacag 24673849  T
Q  215 atcgcaa 221  Q
    |||||||    
T  24673850 atcgcaa 24673856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 22758719 - 22758554
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||  |||||||||||    
T  22758719 ctcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgcagtt 22758624  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22758623 aatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 22758554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 22740945 - 22740799
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||| ||||  |||||||||||||| ||||||||||||| |||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcatta 22740846  T
Q  175 ctacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22740845 ctacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 22740799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 23038112 - 23038315
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||| |||||| || ||||||||||||||||| |    |||||||||| ||||||| ||||| ||||||| ||| |     
T  23038112 gacatcatataacgatatcaaataaaaacaagcaacatctcaatcattcattcataa----ttcaagtaattcaattaaacattatatcacatcatattt 23038207  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||  |||||| |||||| |||||| |||||||||| |||| ||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  23038208 aacactaacatctcataagagcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacaca 23038307  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  23038308 gatcgcaa 23038315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 22799092 - 22798965
Alignment:
Q  95 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctc 193  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  22799092 cattatatcacatcatattcaacattaacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccatctc 22798993  T
Q  194 taatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||    
T  22798992 taatcaaattatgcgacacagatcgcaa 22798965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 21918288 - 21918155
Alignment:
Q  88 aattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtc 187  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||    
T  21918288 aattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtc 21918189  T
Q  188 catctctaatcaaattatgcgacacagatcgcaa 221  Q
    || |  ||||||| |||||||| |||||||||||    
T  21918188 caaccataatcaatttatgcgaaacagatcgcaa 21918155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 25963702 - 25963556
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||||| |||||| || ||||||||||| ||||||||||||    
T  25963702 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacatt 25963604  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| ||||| || |||||||||||    
T  25963603 actacctaagggtccaaccctaatcaacttatgagaaacagatcgcaa 25963556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 23019666 - 23019545
Alignment:
Q  101 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatca 199  Q
    ||||||| ||| ||||| |||||||||||||| |||||| || ||||||  |||| |||||||||||||||||||||||||||||||||| ||||||| |    
T  23019666 atcacatcatattcaacattaacatttcataaaagcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaatta 23019567  T
Q  200 aattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||    
T  23019566 aattatgcgacacagatcgcaa 23019545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 40622148 - 40622047
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgc 219  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  40622148 aacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgc 40622049  T
Q  220 aa 221  Q
    ||    
T  40622048 aa 40622047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 76 - 206
Target Start/End: Complemental strand, 22811896 - 22811765
Alignment:
Q  76 ttcaagtaatgcaatt-aatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||| |||||| || ||||||||||| |||||||||||||    
T  22811896 ttcaggtaatgcaatttaatcattaaatcacattataatcaacttaatagttcatagcagcttcacagatttcacttaacatcttaaataggtcacatta 22811797  T
Q  175 ctacccaagggtccatctctaatcaaattatg 206  Q
    ||||| || |||||| | |||||||| |||||    
T  22811796 ctacctaaaggtccaacactaatcaatttatg 22811765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 203
Target Start/End: Complemental strand, 23103400 - 23103253
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||| |    ||||||| |||||||||| ||||| ||||||| | |  ||||  |||||| ||||||||||||| ||||||||||||    
T  23103400 ctcaatcattcattcataa----ttcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcataacagcttcacagattgcagtt 23103305  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaatt 203  Q
    ||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  23103304 aacttcttatataggtctcattactaccaaagggtccatctctaatcaaatt 23103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 40428597 - 40428700
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  40428597 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattact 40428696  T
Q  177 accc 180  Q
    ||||    
T  40428697 accc 40428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 45678165 - 45678074
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcaca 106  Q
    |||||||||||  | ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45678165 gacatcatataaaggtatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcaca 45678074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 37524820 - 37524944
Alignment:
Q  96 attaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctcta 195  Q
    |||||||||||||||||||| | ||||| |||||| ||||||| |||| | || ||||||||||| |||||||||||||||||| ||||||||| |  ||    
T  37524820 attaaatcacattataatcagcctaacagttcatagcagcttcacagacttcaattaacatctta-ataggtcacattactacctaagggtccaacctta 37524918  T
Q  196 atcaaattatgcgacacagatcgcaa 221  Q
    ||||| ||||| || |||||||||||    
T  37524919 atcaacttatgtgaaacagatcgcaa 37524944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 25961518 - 25961395
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||| |||||||||  ||| || ||||||| |||||||||| ||||||  ||||||    
T  25961518 ttcaagtaatgcatttaatcattaaatcacattacaa-caacttaacagttcataacaaattcacatattgcagctaacatcttaaataggtttcattac 25961420  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  25961419 tacctaatgttccattcctaatcaa 25961395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 45678075 - 45677998
Alignment:
Q  140 cagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| |||||||| | ||||||||||||||    
T  45678075 cagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatc 45677998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 24174932 - 24175056
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||||||||| ||||||  ||||||    
T  24174932 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 24175031  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  24175032 tacctaatgttccattcctaatcaa 24175056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 24655323 - 24655199
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||||||||| ||||||  ||||||    
T  24655323 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 24655224  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  24655223 tacctaatgttccattcctaatcaa 24655199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 19688740 - 19688638
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  19688740 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 19688642  T
Q  176 tacc 179  Q
    ||||    
T  19688641 tacc 19688638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 24735525 - 24735627
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  24735525 ttcaagtaatgcgatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 24735623  T
Q  176 tacc 179  Q
    ||||    
T  24735624 tacc 24735627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 21327550 - 21327449
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||||||| |||||||||| |||| || ||||| | |||||||||||||| |||| | || ||||||| ||| ||| ||| || ||||    
T  21327550 tcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcataacagcttcacagaattcacttaacattttaaatatgtctcactact 21327451  T
Q  177 ac 178  Q
    ||    
T  21327450 ac 21327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 24716510 - 24716391
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    ||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| || ||| || |||||||||||||| ||||||| || |||||||    
T  24716510 agtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacaggtttcagttaacatcttaaataggtctcactactacc 24716412  T
Q  180 caagggtccatctctaatcaa 200  Q
     || | |||||  ||||||||    
T  24716411 taaagttccattcctaatcaa 24716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 10101629 - 10101527
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  10101629 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 10101531  T
Q  176 tacc 179  Q
    ||||    
T  10101530 tacc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 41531321 - 41531266
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  41531321 agtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 41531266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 21318619 - 21318518
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||||||| |||||||||| |||| || ||||| | |||||| ||||||| || | | || ||||||||||| ||| ||| || ||||    
T  21318619 tcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcatagcagcttcacataattcacttaacatcttaaatatgtctcactact 21318520  T
Q  177 ac 178  Q
    ||    
T  21318519 ac 21318518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 30345314 - 30345253
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  30345314 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 30345253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 1283172 - 1283233
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||| |||||||||| || ||||||| || |||||||||||    
T  1283172 atttcgagtaatgcatttaatcatttaatcacattacaaacaacttagcagttcataacagc 1283233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 31344995 - 31345056
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||| ||||||||||| || ||||||| || |||||||||||    
T  31344995 atttcgagtaatgcatttaatcatgaaatcacattacaaacaacttagcagttcataacagc 31345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 179
Target Start/End: Original strand, 24870016 - 24870115
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    ||||||| | |||||| ||||||||||||| || ||||||| || ||| ||||| | || |||||| | | |||||||||| ||||||  ||||||||||    
T  24870016 agtaatgtatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacctcacagattccggctaacatcttaaataggtttcattactacc 24870115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 12901496 - 12901460
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12901496 ttcaagtaatgcaatcaatcaataaatcacattataa 12901460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 15477725 - 15477761
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  15477725 ttcaagtaatgcaatcaatcaataaatcacattataa 15477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 24649479 - 24649515
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  24649479 ttcaagtaatgcaatcaatcaataaatcacattataa 24649515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 27601918 - 27601954
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  27601918 ttcaagtaatgcaatcaatcaataaatcacattataa 27601954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 41530994 - 41530958
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  41530994 ttcaagtaatgcaatcaatcaataaatcacattataa 41530958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 23501391 - 23501184
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| ||| ||    
T  23501391 gacatcatataacgatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatctcacatcatattc 23501292  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| |||||| |||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  23501291 aacattaacaattcataacagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacaca 23501192  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  23501191 gatcgcaa 23501184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 23201441 - 23201649
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  |||| | ||| ||    
T  23201441 gacatcatataacgatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatctcacgtcatattc 23201540  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattacta-cccaagggtccatctctaatcaaattatgcgacac 212  Q
    ||| |||||| |||||||||||||| ||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  23201541 aacattaacaattcataacagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacac 23201640  T
Q  213 agatcgcaa 221  Q
    |||||||||    
T  23201641 agatcgcaa 23201649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 14079283 - 14079428
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  14079283 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataagagcttcacagattgcagttaacttcttaaataggtcacattac 14079382  T
Q  176 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  14079383 tacccaggggtccatctctaatcaaattatgcgacacagatcgcaa 14079428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 23512179 - 23512387
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccattt-caagtaatgcaattaatcattaaatcacattataat 113  Q
    |||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||| | || |||| ||| |    
T  23512179 gacatcgtataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacattttcaagtaatgcaattaaacatcatattacatcatatt 23512278  T
Q  114 caac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacac 212  Q
    |||| ||||||||| |||| | ||||  |||||||||| ||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  23512279 caacattaacattttataagatcttcaaagattgcagtaaacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacac 23512378  T
Q  213 agatcgcaa 221  Q
    |||||||||    
T  23512379 agatcgcaa 23512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 21366652 - 21366505
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  21366652 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 21366553  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  21366552 actacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaa 21366505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 37724019 - 37724184
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||| |    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||| ||||||||| ||||||||||||    
T  37724019 ctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaacagcttcacagattgcagtt 37724114  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| ||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37724115 aacttcttatataggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaa 37724184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 21873402 - 21873525
Alignment:
Q  95 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctc 193  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  21873402 cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggttcatctc 21873501  T
Q  194 taatcaaattatgcgacacagatc 217  Q
    ||||||||||||||||||||||||    
T  21873502 taatcaaattatgcgacacagatc 21873525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 221
Target Start/End: Original strand, 20805669 - 20805827
Alignment:
Q  62 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttat 161  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||  |  |||||| || |||| |||||| || |||||| ||||||||||||||     
T  20805669 tcattcaataacatttcaagtaatgcatttaatcattaaatcacattaccaataacttagcagttca-aacagcctcacagatttcagttaacatcttaa 20805767  T
Q  162 ataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||||||||| ||||||| | | |||||||| || |||||||||||||||||    
T  20805768 ataggtcacattactacctaagggtcaaaccctaatcaatttgtgcgacacagatcgcaa 20805827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 26704244 - 26704342
Alignment:
Q  119 taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  26704244 taacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatc 26704342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 26973977 - 26974075
Alignment:
Q  119 taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  26973977 taacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatc 26974075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 20767091 - 20767207
Alignment:
Q  62 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttat 161  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||  | |||||||  | |||| |||||| || |||||| ||||||||||||||     
T  20767091 tcattcaataacatttcaagtaatgcatttaatcattaaatcacattaccaacaacttagtagttca-aacagcctcacagatttcagttaacatcttaa 20767189  T
Q  162 ataggtcacattactacc 179  Q
    ||||||||||||||||||    
T  20767190 ataggtcacattactacc 20767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 18769944 - 18769847
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||| | | || |||||||||    
T  18769944 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatc 18769847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 22032507 - 22032575
Alignment:
Q  132 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaa 200  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||    
T  22032507 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaa 22032575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 123289 - 123176
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || || ||||||| ||||||||||| || |||||  |||||||||||| | |||||||| |||||    
T  123289 ttcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacaattcataacagcctcacagatctcagttaacatctcacataggtcatattac 123191  T
Q  176 tacccaagggtccat 190  Q
    |||| |||| |||||    
T  123190 tacctaaggttccat 123176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 23458721 - 23458846
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| || |||||| |||||||||||||| ||||||| || |    
T  23458721 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23458819  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| || | |||||  ||||||||    
T  23458820 actacctaaagttccattcctaatcaa 23458846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 23462982 - 23463107
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| || |||||| |||||||||||||| ||||||| || |    
T  23462982 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23463080  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| || | |||||  ||||||||    
T  23463081 actacctaaagttccattcctaatcaa 23463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 12028549 - 12028446
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  12028549 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 12028450  T
Q  176 tacc 179  Q
    ||||    
T  12028449 tacc 12028446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 23451477 - 23451602
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||| ||||||||| ||| || ||||||| || |||| |||||| || |||||| |||||||||||||| ||||||| || |    
T  23451477 atttcaagtaatgcatttaatcgttaaatcactttacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23451575  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| || | |||||  ||||||||    
T  23451576 actacctaaagttccattcctaatcaa 23451602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 23572215 - 23572338
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    |||||||||||||  ||| ||||| |  |||| |||||||||| || ||| ||||| || |||| || |||||||||||| ||||||||||||| |||||    
T  23572215 ttcaagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcaacttcacaaattgcagttaacttcttatataggtctcatta 23572312  T
Q  175 ctacccaagggtccatctctaatcaa 200  Q
    ||||| ||||||||||| ||||||||    
T  23572313 ctacctaagggtccatccctaatcaa 23572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 24222009 - 24222112
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||| ||||| ||||||  ||||||    
T  24222009 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacgtcttaaataggtttcattac 24222108  T
Q  176 tacc 179  Q
    ||||    
T  24222109 tacc 24222112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 11220531 - 11220592
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11220531 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11220592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 11225117 - 11225178
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11225117 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11225178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 11228940 - 11229001
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11228940 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11229001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 11230929 - 11230990
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11230929 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11230990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 22757258 - 22757349
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggt 167  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||| || ||| ||||| |||| ||| |  |||||||||||||| ||||||    
T  22757258 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacttcacaggtctcagttaacatcttaaataggt 22757349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 15236764 - 15236651
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  15236764 ttcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 15236666  T
Q  176 tacccaagggtccat 190  Q
    |||| |||| |||||    
T  15236665 taccaaaggttccat 15236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 11226950 - 11227011
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||| ||||    
T  11226950 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcatatcagc 11227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 18356075 - 18356136
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  18356075 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 18356136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 20911158 - 20911097
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20911158 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20911097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 10753147 - 10753206
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 133  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  10753147 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 10753206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 174
Target Start/End: Original strand, 18356468 - 18356546
Alignment:
Q  95 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| |||||    
T  18356468 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcatta 18356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 40723904 - 40723849
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  40723904 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 40723849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 17919134 - 17919078
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacag 134  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||    
T  17919134 tcaagtaatgcatttaatctttaaatcacattacaa-caacttaacaattcataacag 17919078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 17410562 - 17410602
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaa 116  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  17410562 ttcaagtaatgcaatcaatcaataaatcacattataatcaa 17410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 24767532 - 24767493
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  24767532 atttcaagtaatgcatttaatcattaattcacattataat 24767493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 31342258 - 31342301
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaactt 119  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  31342258 ttcaagtaatgcaattaatcgttaaatcacattacaaacaactt 31342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 20295969 - 20296005
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  20295969 ttcaagtaatgcaatcaatcaataaatcacattataa 20296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 15711 - 15512
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| |||||||||||| ||||||||||||||||| |    ||||||||||||||||||||||||  |||||| ||| ||    
T  15711 gacatcatataacgatatcaaatataagcaagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaatcattatctcacatcatattc 15616  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  15615 aacattaacatttcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacaca 15516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 123; Significance: 2e-63; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 14745 - 14947
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| ||    
T  14745 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattc 14844  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||| | |||||||||||||||||||||||||||||    
T  14845 aacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacaca 14944  T
Q  214 gat 216  Q
    |||    
T  14945 gat 14947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 23760 - 23962
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| ||    
T  23760 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattc 23859  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||| | |||||||||| ||||||||||||||||||    
T  23860 aacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacaca 23959  T
Q  214 gat 216  Q
    |||    
T  23960 gat 23962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 39184 - 39386
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||| |  | |||| ||| ||    
T  39184 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattc 39283  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||| | |||||||||| ||||||||||||||||||    
T  39284 aacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacaca 39383  T
Q  214 gat 216  Q
    |||    
T  39384 gat 39386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 6176 - 6383
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||| |  | |||| ||| ||    
T  6176 gacatcatataaagatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagaaatgcaattaaacatcatcttacatcatattc 6275  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||  | |||||||||| || ||||||||||||||||||||||||||||    
T  6276 aacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacaca 6375  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  6376 gatcgcaa 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 46713 - 46566
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  46713 atttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacagattgcagttaacttcttatataggtcacatt 46614  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  46613 actacctaagagtccatccctaatcaatttatgcgacacagatcgcaa 46566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 18317 - 18520
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  ||||||||||||||| | |||||| ||||||||||||||||| |    |||||||||||||||||| | | |  |||||| ||||||    
T  18317 gacatcacataacgatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtaatctcacatcataatc 18412  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18413 aacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 18512  T
Q  214 gatcgcaa 221  Q
     |||||||    
T  18513 tatcgcaa 18520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 9703344 - 9703547
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  ||||||||||||||| | |||||| ||||||||||||||||| |    |||||||||||||||||| | | |  |||||| ||||||    
T  9703344 gacatcacataacgatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtaatctcacatcataatc 9703439  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  9703440 aacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacg 9703539  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  9703540 gatcgcaa 9703547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 12321728 - 12321583
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  12321728 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacagttcataacagtttcacagattgcagttaacatcttatataggtcacatt 12321629  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgc 219  Q
    |||||| ||| ||||||| |||||||| | ||||||||||||||||    
T  12321628 actacctaagagtccatccctaatcaattcatgcgacacagatcgc 12321583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 24054560 - 24054749
Alignment:
Q  29 atatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttc 127  Q
    ||||||| ||||||||||||||| ||||||| ||||||||| |    ||||||||||| | |||| ||| | ||||||| |||||||||  |||||| ||    
T  24054560 atatcaattaaaagcaagcatcatctcaatctttcattcataa----ttcaagtaatgtatttaaacatcatatcacatcataatcaacactaacatctc 24054655  T
Q  128 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24054656 ataacagcttcacagattgcagttaactccttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacagatcgcaa 24054749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 14430012 - 14430159
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  14430012 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 14430111  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| |||||||||||    
T  14430112 actacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaa 14430159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 18154877 - 18154676
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  |||||||||||||| |||||| || ||||||||||||||||| |    |||||||||||||||||| ||||| ||| ||| ||| ||    
T  18154877 gacatcacataacgatatcaaataaaa-caagcaacatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcgcatcatattc 18154783  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||| ||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||    
T  18154782 aacattaacatctcataacagcttcacatattgcagttaacttcttatataggtctcattactacccaatggtccatctttaatcaaatcatgcgacaca 18154683  T
Q  214 gatcgca 220  Q
    |||||||    
T  18154682 gatcgca 18154676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 19649511 - 19649323
Alignment:
Q  29 atatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttc 127  Q
    ||||||||||||| || ||| || ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| |||||  ||||||  |    
T  19649511 atatcaaataaaaaca-gcaacatctcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcac 19649417  T
Q  128 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
     |||| ||||| ||||||||||||||| ||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19649416 ttaactgcttcacagattgcagttaacttctaatttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 19649323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 11880459 - 11880533
Alignment:
Q  147 cagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11880459 cagttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaa 11880533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 3271955 - 3272079
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||||||||| || ||| || ||||||||||||||||||| || |||    
T  3271955 ttcaagtaatgcaattaatcagtaaatcacatcataatcagcttaatagttcataacagcttcacatatttcatttaacatcttatataggtctcactac 3272054  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  3272055 tacctaatgttccattcctaatcaa 3272079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 17138003 - 17137906
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||| | | || |||||||||    
T  17138003 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatc 17137906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 12318249 - 12318351
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  12318249 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 12318347  T
Q  176 tacc 179  Q
    ||||    
T  12318348 tacc 12318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 15605256 - 15605154
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  15605256 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 15605158  T
Q  176 tacc 179  Q
    ||||    
T  15605157 tacc 15605154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 12187205 - 12187273
Alignment:
Q  132 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaa 200  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||    
T  12187205 cagcttcacagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaa 12187273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 16583378 - 16583484
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||| |||||| ||| |  ||||||| |||||||||||||| |||||     
T  16583378 ttcaagtaatgcaatcaatcat-aaatcacattataatca-cttagcatttcataatagcttcacagttctcagttaatatcttatataggtctcattag 16583475  T
Q  176 tacccaagg 184  Q
    |||| ||||    
T  16583476 tacctaagg 16583484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 11312770 - 11312872
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  11312770 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 11312868  T
Q  176 tacc 179  Q
    ||||    
T  11312869 tacc 11312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 9446143 - 9446019
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||||||||| ||| ||  ||||||    
T  9446143 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaatatgtttcattac 9446044  T
Q  176 tacccaagggtccatctctaatcaa 200  Q
    |||| || | |||||  ||||||||    
T  9446043 tacctaaagttccattcctaatcaa 9446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 15580813 - 15580904
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtc 168  Q
    ||||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||| |||||| ||| || ||||||||||| || |||||||    
T  15580813 ttcaagtaatgcaatcaattaataaatcacattataatc-acttagcatttcataatagcttcacagttttcagttaacatcctaaataggtc 15580904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 33229 - 33331
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  33229 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 33327  T
Q  176 tacc 179  Q
    ||||    
T  33328 tacc 33331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 70749 - 70647
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  70749 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 70651  T
Q  176 tacc 179  Q
    ||||    
T  70650 tacc 70647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 74858 - 74756
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  74858 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 74760  T
Q  176 tacc 179  Q
    ||||    
T  74759 tacc 74756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 15083979 - 15084040
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  15083979 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 15084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 13635453 - 13635346
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  | ||||| |||||| ||||| | |||||     
T  13635453 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctctgttaatatcttaaataggcctcattag 13635355  T
Q  176 tacccaagg 184  Q
    |||| ||||    
T  13635354 tacctaagg 13635346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 2760265 - 2760347
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 160  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || | |||||| || |||||| ||||||||||||||    
T  2760265 tcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttta-aacagcctcacagatttcagttaacatctta 2760347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 20569580 - 20569477
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||  |  ||| |||||||||| ||||||  ||||||    
T  20569580 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacatgtatcagctaacatcttaaataggtttcattac 20569481  T
Q  176 tacc 179  Q
    ||||    
T  20569480 tacc 20569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 39722049 - 39722110
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  39722049 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 39722110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 45170329 - 45170272
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 131  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  45170329 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 45170272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 25927490 - 25927431
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 133  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  25927490 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 25927431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 39267898 - 39267847
Alignment:
Q  62 tcattcattaccatttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||    
T  39267898 tcattcaatactatttcaagtaatgcatttaatcattaattcacattataat 39267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 1859073 - 1859012
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  1859073 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 1859012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 13918767 - 13918706
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  13918767 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 13918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 42205257 - 42205338
Alignment:
Q  98 taaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    |||||||||||| ||  | ||||| | |||||||||||||| ||| |  |||||||||||| | ||||||||||||||||||    
T  42205257 taaatcacattacaaatagcttaataattcataacagcttcacaggtctcagttaacatctcaaataggtcacattactacc 42205338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 39722388 - 39722424
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39722388 ttcaagtaatgcaattaatcaataaatcacattataa 39722424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 2530371 - 2530316
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||||| |||||||||||||||||||| || ||||||| || ||||| |||||    
T  2530371 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcatgacagc 2530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 2832428 - 2832389
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  2832428 atttcaagtaatgcatttaatcattaattcacattataat 2832389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 9751742 - 9751703
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  9751742 atttcaagtaatgcatttaatcattaattcacattataat 9751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 12714986 - 12715022
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12714986 ttcaagtaatgcaatcaatcaataaatcacattataa 12715022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 12718790 - 12718826
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12718790 ttcaagtaatgcaatcaatcaataaatcacattataa 12718826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 12723701 - 12723737
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12723701 ttcaagtaatgcaatcaatcaataaatcacattataa 12723737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 16114363 - 16114399
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16114363 ttcaagtaatgcaatcaatcaataaatcacattataa 16114399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 16117516 - 16117552
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16117516 ttcaagtaatgcaatcaatcaataaatcacattataa 16117552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 16907185 - 16907149
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16907185 ttcaagtaatgcaatcaatcaataaatcacattataa 16907149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 18279525 - 18279561
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  18279525 ttcaagtaatgcaatcaatcaataaatcacattataa 18279561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 18283488 - 18283524
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  18283488 ttcaagtaatgcaatcaatcaataaatcacattataa 18283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 3877 - 4021
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  3877 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattac 3976  T
Q  176 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  3977 tacccaagggtccatctctaatcaaa-tatgcgatacagatcgcaa 4021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 8308 - 8452
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  8308 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattac 8407  T
Q  176 tacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  8408 tacccaagggtccatctctaatcaaa-tatgcgatacagatcgcaa 8452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 69911 - 70076
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| ||||||||||||| ||||||||||||    
T  69911 ctcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagtt 70006  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  70007 aacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 70076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 10568 - 10471
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||  ||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||    
T  10568 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagtatttcataatagcttcacagttctcagttaatatcttaaataggtctcatta 10471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 4979 - 4772
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| | ||| ||| |  | |||| ||| ||    
T  4979 gacatcatataaggatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtattgccaataaacatcatcttacatcatattc 4880  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||||| ||| |||||||||||||| | | ||||||||| ||||| |||| ||||||||||||||||||    
T  4879 aacattaacatttcataacagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacaca 4780  T
Q  214 gatcgcaa 221  Q
     |||||||    
T  4779 aatcgcaa 4772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 107; Significance: 8e-54; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 65834 - 65632
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |    ||||| |||||||||||| ||||| ||||||| ||| ||    
T  65834 gacatcatataaggatatcaaataaaa-caagcatcatctcaatcattcattcataa----ttcaattaatgcaattaaacattatatcacatcatattc 65740  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||  |||||| |||||||||  || ||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  65739 aacactaacatctcataacaggatcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaa 65640  T
Q  214 gatcgcaa 221  Q
    ||||||||    
T  65639 gatcgcaa 65632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 53687 - 53789
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  53687 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 53785  T
Q  176 tacc 179  Q
    ||||    
T  53786 tacc 53789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 36409 - 36348
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  36409 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 36348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 290 - 433
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||  |||||||||||    
T  290 atttcaagtaatgcaattagtcattaaatcacattataatcaacttaacagttcataacagcttcacagatttccgttaacatcttaattaggtcacatt 389  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||    
T  390 actacctaagggtccatccctaatcaatttatgcgacacagatc 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 1433 - 1620
Alignment:
Q  28 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 126  Q
    |||||||||||||||||| ||||   |||||||||||||||| |    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| |    
T  1433 gatatcaaataaaagcaatcatc---tcaatcattcattcataa----ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatct 1525  T
Q  127 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
     |||||||||||| |||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1526 aataacagcttcgtagattgcatttaacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 1620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 32516 - 32712
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    ||||||| |||  ||||||||||||||||||    || ||||||||||||||||| ||    ||||||||||||||||||||||||||||||||||||||    
T  32516 gacatcacataacgatatcaaataaaagcaa----catctcaatcattcattcataac----tcaagtaatgcaattaatcattaaatcacattataatc 32607  T
Q  115 aac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| ||||||||||||||||||||| ||||||||| ||||||| ||| | ||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  32608 aacattaacatttcataacagcttcacagattgcaattaacatttta-aaaggtcactttactacccaggggtccaactctaaacaaattatgcgacaca 32706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 8999 - 8796
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| |||||||||||| ||||||||||||||||| |    ||||||||||| ||| || ||| |  |||||| ||| ||    
T  8999 gacatcatataacgatatcaaatacaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgaaatcaaacatcatctcacatcatattc 8904  T
Q  115 aactt-aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    ||| | ||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  8903 aacatcaacatttcataacagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacaca 8804  T
Q  214 gatcgcaa 221  Q
    | ||||||    
T  8803 ggtcgcaa 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 20061 - 20258
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||   ||||||||||||| ||||||||| ||||||||||||||||| |    |||||||||||||||||| ||||| ||||||| ||| ||    
T  20061 gacatcatataacaatatcaaataaaa-caagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattc 20155  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||  |||||| ||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  20156 aacactaacatctcataacagcttcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatccctaatcaaatcatgcgacaca 20255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 18456 - 18292
Alignment:
Q  54 tcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagtta 152  Q
    |||||||||||||||| ||    |||||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| |||||    
T  18456 tcaatcattcattcataac----tcaagtaatgcaattattcgttaaatcacatcatattcaacattaacatttcataacagcttcacagattgtagtta 18361  T
Q  153 acatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  18360 acttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaa 18292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 21555 - 21408
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||| || ||| |||||||||||||| ||||||||||||    
T  21555 atttcaagtaatacaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacaaatttcagttaacatcttaaataggtcacatt 21456  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||||| |||||||| |||||||| |||||||||||    
T  21455 actacctaagggtccatccctaatcaatttatgcgaaacagatcgcaa 21408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 80677 - 80616
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| || |||||| |||||||||||||||||||| |  ||||||| || |||||||||||    
T  80677 atttcgagcaatgcatttaatcattaaatcacattacagacaacttagcagttcataacagc 80616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 1623 - 1770
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  1623 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 1722  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||| | |||||||||||    
T  1723 actacctaagggtccaaccctaatcaatttatgcaaaacagatcgcaa 1770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 36535 - 36735
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||  ||||||||||| || || ||| || |||||||||||||||||    | |||||||||||||||||| ||||| ||||||| ||| ||    
T  36535 gacatcatataacgatatcaaatataaacacgcaacatctcaatcattcattcat----agttcaagtaatgcaattaaacattatatcacatcatattc 36630  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||  |||||| ||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  36631 aacactaacatctcataacagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccttctctaaacaaatcatgcgacaca 36730  T
Q  214 gatcg 218  Q
    |||||    
T  36731 gatcg 36735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 16315 - 16188
Alignment:
Q  95 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctc 193  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||    
T  16315 cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcatattactacccaagggtccacctc 16216  T
Q  194 taatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||    
T  16215 taatcaaattatgcgacacagatcgcaa 16188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 18642 - 18516
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  18642 atttcaagtaatggaattaatcattaaatcacattataatcaacataccatttcataacagcttcacagattgcagttaacttcttatataggtctcatt 18543  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| ||||||||||| | ||||||    
T  18542 actacctaagggtccatcccaaatcaa 18516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 6295 - 6156
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||| ||||||||| |||||||| || |||| |||||||    
T  6295 atttcaagtaatgcaattaataattaaatcacaatataaacaacttaacatttcataatagcttcacagattgcatttaacatcctaaatagatcacatt 6196  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacaca 213  Q
    |||||  | |||||||||||||||||| ||||||||||||    
T  6195 actacttaggggtccatctctaatcaagttatgcgacaca 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 38439 - 38318
Alignment:
Q  101 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatca 199  Q
    ||||||| ||| ||||| ||||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  38439 atcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatca 38340  T
Q  200 aattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||    
T  38339 aattatgcgacacagatcgcaa 38318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 221
Target Start/End: Complemental strand, 23626 - 23506
Alignment:
Q  101 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatca 199  Q
    ||||||| ||| ||||| ||||||||||||||||||||| |||||||||  |||| |||| ||||||||||||||||||||||||||||| |  ||||||    
T  23626 atcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatca 23528  T
Q  200 aattatgcgacacagatcgcaa 221  Q
    |||||||||||| |||||||||    
T  23527 aattatgcgacaaagatcgcaa 23506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 1193 - 1066
Alignment:
Q  95 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctc 193  Q
    ||||| ||||||| ||| ||||| |||| |||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  1193 cattatatcacatcatattcaacattaatatttcataacagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctc 1094  T
Q  194 taatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||    
T  1093 taatcaaattatgcgacacagatcgcaa 1066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 523 - 670
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  |||||| |||||  || ||||||||||| ||||||| ||||    
T  523 atttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacagatctcaattaacatcttaaataggtcgcatt 622  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||||| | |||||| |||||||| |||||||||||    
T  623 actacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaa 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 715 - 862
Alignment:
Q  76 ttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||||||| ||||||| |||||||||||| ||| ||| ||||| |||||||  | |||||||||| ||||||||||||||| ||||| ||||||| ||||    
T  715 ttcaagtagtgcaatttaatcattaaatcgcatcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcatt 814  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  815 actaccgaagggtccatctctaatcaaattatgcgacacagatcgcaa 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 193
Target Start/End: Original strand, 42752 - 42871
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||    
T  42752 atttcaagtaatgcatttaatcattaaatcacattagaatcagcttaacagttcataacagcttcacagatctcagttaacatcttaaataggtcacatt 42851  T
Q  174 actacccaagggtccatctc 193  Q
    |||||| |||||||||||||    
T  42852 actacctaagggtccatctc 42871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 15216 - 15321
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||| || |    
T  15216 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaactttttataacagcttcacagattgcagttaacatcttataaaggtctcact 15315  T
Q  174 actacc 179  Q
    ||||||    
T  15316 actacc 15321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 220
Target Start/End: Original strand, 174882 - 175046
Alignment:
Q  53 ctcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||| |    |||||||||||||| ||| ||||| ||||| | ||| |||||  |||||| |||||| |||||| |||||| |||||    
T  174882 ctcaatcattcattcataa----ttcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataatagcttcacagatttcagtt 174977  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgca 220  Q
    ||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  174978 aacttcttatataggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgca 175046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 1960 - 2106
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| ||| |||||| | |||||||||||| ||||||||||||    
T  1960 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacatt 2058  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| || ||||||||| |||||||||| || ||||| |||||||||||    
T  2059 actccctaagggtccaactctaatcaatttgtgcgaaacagatcgcaa 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 9642 - 9788
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| ||| |||||| | |||||||||||| ||||||||||||    
T  9642 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacatt 9740  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| || ||||||||| |||||||||| || ||||| |||||||||||    
T  9741 actccctaagggtccaactctaatcaatttgtgcgaaacagatcgcaa 9788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 2071 - 1927
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt-cataacagcttcgcagattgcagttaacatcttatataggtcacat 172  Q
    ||||||||||||||| ||||||||||||| |||||| || ||||||| ||||| |||||||||||| || ||| ||||||| |||||| |||||||||||    
T  2071 atttcaagtaatgcatttaatcattaaattacattacaaacaacttagcattttcataacagcttcacatatttcagttaatatcttaaataggtcacat 1972  T
Q  173 tactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||||| ||||||||| | |||||| | | ||||||||||||||    
T  1971 tactacctaagggtccaaccctaatcgattcatgcgacacagatc 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 48464 - 48299
Alignment:
Q  54 tcaatcattcattcattaccatttcaagtaatgcaa-ttaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagtt 151  Q
    ||||||||||||||||    | |||||||  ||||| ||||| |||||||||| | ||| ||||| |||||||  || ||||||||| || |||||| ||    
T  48464 tcaatcattcattcat----aattcaagtggtgcaatttaattattaaatcacgtcatattcaactttaacatcacacaacagcttcacatattgcattt 48369  T
Q  152 aacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48368 aacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaa 48299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 6401 - 6255
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||| ||||||||| |||||||||||||||||||| || ||| ||| || |||| ||||||||| || ||| |||||||||||||| ||||||||||||    
T  6401 atttcgagtaatgcatttaatcattaaatcacattacaaacaagttagcagttca-aacagcttcacatatttcagttaacatcttaaataggtcacatt 6303  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| ||| |||||||    
T  6302 actacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaa 6255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 1027 - 1173
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| ||  ||| |||||| || |||||| |||||||||||||| ||||||||||||    
T  1027 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcaggtca-aacagcctcacagatttcagttaacatcttaaataggtcacatt 1125  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||  ||||||||| | |||||||| || |||||||||||||||||    
T  1126 actacttaagggtccaaccctaatcaatttgtgcgacacagatcgcaa 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 44211 - 44357
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    |||| |||||||||| |||||||||||||||||||| || ||||||| || || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  44211 attttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagtttaaaa-agcttcacagatttcagttaacatcttaaataggtcacatt 44309  T
Q  174 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    |||||| ||||||||| | |||||||| |||||||| | |||||||||    
T  44310 actacctaagggtccaaccctaatcaacttatgcgaaaaagatcgcaa 44357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 1476 - 1373
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||| || |||| |||||||||||||| ||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||    
T  1476 atttcaagtaatgcaattattcgttaagtcacattataatcagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacatt 1377  T
Q  174 acta 177  Q
    ||||    
T  1376 acta 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 74 - 200
Target Start/End: Original strand, 4560 - 4686
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| || |||||||| ||||||||||||| || |    
T  4560 atttcaagtaatgcaattaatcaataaatcacattataatcaacttagcatttcataatagtttcacagtttacagttaacttcttatataggtctcact 4659  T
Q  174 actacccaagggtccatctctaatcaa 200  Q
    |||||| || | |||||  ||||||||    
T  4660 actacctaaagttccattcctaatcaa 4686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 27002 - 27103
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgc 219  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||| ||| ||| |||||||||    
T  27002 aacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgc 27101  T
Q  220 aa 221  Q
    ||    
T  27102 aa 27103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 23924 - 24094
Alignment:
Q  15 gacatcatatagggatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcattaaatcacattataatc 114  Q
    |||||||||||   |||||||||||||   |||| || |||||||||||||||||    | ||||||||||| |||||| ||||| ||||||| ||| ||    
T  23924 gacatcatataacaatatcaaataaaac--agcaacatctcaatcattcattcat----agttcaagtaatgaaattaa-cattatatcacatcatattc 24016  T
Q  115 aact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatc 191  Q
    |||  |||||| || |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  24017 aacactaacatctcttaacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatc 24094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 19275 - 19152
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||||||||| |||||| || ||||||||||||||||||| || ||||    
T  19275 tcaagtaatgcaattaatcaataaatcacatcataatcagcttaatagttcataacagcttcacagatttcatttaacatcttatataggtctcactact 19176  T
Q  177 acccaagggtccatctctaatcaa 200  Q
    ||| || | |||||  ||||||||    
T  19175 acctaatgttccattcctaatcaa 19152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 5719 - 5820
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||  ||||  |||||||||||||| |||||||||||||||    
T  5719 tcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattact 5817  T
Q  177 acc 179  Q
    |||    
T  5818 acc 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 6914 - 7015
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||  ||||  |||||||||||||| |||||||||||||||    
T  6914 tcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattact 7012  T
Q  177 acc 179  Q
    |||    
T  7013 acc 7015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 4208 - 4085
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||| ||| || ||  |||||||||||||| |||||||||||||||    
T  4208 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagattcacatatctcagttaacatcttaaataggtcacattact 4109  T
Q  177 acccaagggtccatctctaatcaa 200  Q
    ||| || | |||||  ||||||||    
T  4108 acctaaagttccattcctaatcaa 4085  T

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Target: scaffold0015 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 77 - 180
Target Start/End: Complemental strand, 192300 - 192197
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||| | ||||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  192300 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaaaaattcataacaacttcacagatctcagttaacatcttaaataggtcacattact 192201  T
Q  177 accc 180  Q
    ||||    
T  192200 accc 192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 7840 - 7771
Alignment:
Q  28 gatatcaaataaaagcaagcatcaactcaatcattcattcattaccatttcaagtaatgcaattaatcat 97  Q
    |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  7840 gatatcaaataaaagcaagcatcatctcaatcagtcattcattaacatttcaagtaatgcaattaatcat 7771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 21746 - 21649
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| | | || |||||||||    
T  21746 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatc 21649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 29638 - 29541
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||| | | || |||||||||    
T  29638 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatc 29541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 7603 - 7717
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| ||| || ||||||| ||||| || |||||||||| ||| ||||| |||| |||||| |||||||||||||||||||||  ||||||    
T  7603 ttcaagtaatgcatttattcgttaaatcgcattacaaacaacttaacagttcttaacaacttcacagattccagttaacatcttatataggtttcattac 7702  T
Q  176 tacccaagggtccat 190  Q
    |||| |||| |||||    
T  7703 tacctaaggttccat 7717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 2419 - 2317
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||| | |||||||||||||||||||| || || ||||||| |||||||||||||| |||||| |||||||||||| | ||||||  |||||||    
T  2419 tcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagattccagttaacatctaagataggtttcattact 2320  T
Q  177 acc 179  Q
    |||    
T  2319 acc 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 10279 - 10177
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||| | |||||||||||||||||||| || || ||||||| |||||||||||||| |||||| |||||||||||| | ||||||  |||||||    
T  10279 tcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagattccagttaacatctaagataggtttcattact 10180  T
Q  177 acc 179  Q
    |||    
T  10179 acc 10177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 414035 - 413921
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| |||||||||||||||||| ||  | ||||    
T  414035 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagttaacatcttatatatgtttctttac 413936  T
Q  176 tacccaagggtccat 190  Q
    |||| |||| |||||    
T  413935 tacctaaggttccat 413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 71454 - 71542
Alignment:
Q  95 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagg 184  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| |||| ||||    
T  71454 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacctaagg 71542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 71188 - 71241
Alignment:
Q  82 taatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||| |||||||| ||||||||||| || |||||||||| |||||||||||    
T  71188 taatgcatttaatcataaaatcacattacaaacaacttaacagttcataacagc 71241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 2055 - 2152
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatc 217  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||| | | || |||||||||    
T  2055 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatc 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 35494 - 35393
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||||||||||||||||| || || ||||| | |||||||||||||| ||| |  |||||||||||| | |||||||||||||||    
T  35494 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaataattcataacagcttcacaggtctcagttaacatctcaaataggtcacattact 35395  T
Q  177 ac 178  Q
    ||    
T  35394 ac 35393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 15190 - 15090
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    ||||||||| |||||||||||||||||||| || |  |||| || |||||||||||||| |||||  ||||||||||||||  |||||||||||||||||    
T  15190 agtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttcacagatctcagttaacatcttaagtaggtcacattactacc 15091  T
Q  180 c 180  Q
    |    
T  15090 c 15090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 180
Target Start/End: Complemental strand, 19712 - 19612
Alignment:
Q  80 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    ||||||||| |||||||||||||||||||| || |  |||| || |||||||||||||| |||||  ||||||||||||||  |||||||||||||||||    
T  19712 agtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttcacagatctcagttaacatcttaagtaggtcacattactacc 19613  T
Q  180 c 180  Q
    |    
T  19612 c 19612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 1922 - 2026
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 173  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| || ||||||||||||||||||| || |    
T  1922 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcatttaacatcttatataggtctcact 2020  T
Q  174 actacc 179  Q
    ||||||    
T  2021 actacc 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 8693 - 8796
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  8693 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 8792  T
Q  176 tacc 179  Q
    ||||    
T  8793 tacc 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 66399 - 66297
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  66399 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 66301  T
Q  176 tacc 179  Q
    ||||    
T  66300 tacc 66297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 17097 - 17051
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17097 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 17051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 445 - 514
Alignment:
Q  110 taatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    |||||| ||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  445 taatcagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattactacc 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 7469 - 7549
Alignment:
Q  120 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaa 200  Q
    ||||| ||||| ||| |||  |||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  7469 aacatctcatatcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 4764 - 4690
Alignment:
Q  101 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||| ||| ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  4764 atcacatcatattcaacattaacatttcata-cagcttcacagattgcagttaacttcttatataggtcacattac 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 13026 - 13128
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| | ||| |  ||||||| |||||| ||||||| |||||     
T  13026 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctccacagttctcagttaatatcttaaataggtctcattag 13124  T
Q  176 tacc 179  Q
    ||||    
T  13125 tacc 13128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 19313 - 19369
Alignment:
Q  79 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagct 136  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  19313 aagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagct 19369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 422516 - 422413
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||| ||| || ||||||||||||| || |||||||| | ||| ||||| |||| ||||||  ||||||||||||| ||||||  ||||||    
T  422516 ttcaagtaatgcatttagtcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagattctagttaacatcttaaataggtttcattac 422417  T
Q  176 tacc 179  Q
    ||||    
T  422416 tacc 422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 173412 - 173473
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 138  Q
    ||||||||||||||| ||||| || |||||| ||||||| ||||| |||||||||| ||||||    
T  173412 ttcaagtaatgcaatcaatcaatatatcacaatataatc-acttagcatttcataatagcttc 173473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 12894 - 13017
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaactt-aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 174  Q
    |||||||||||||  ||| ||||| |  |||| ||||||||||  ||||| |||||  |||||| || |||||||||||| ||||||||||||| |||||    
T  12894 ttcaagtaatgca--taaacattataatacatcataatcaactccaacatctcatattagcttcacaaattgcagttaacttcttatataggtctcatta 12991  T
Q  175 ctacccaagggtccatctctaatcaa 200  Q
    ||||| |||||||||||  |||||||    
T  12992 ctacctaagggtccatccataatcaa 13017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 80834 - 80936
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  |||||||| || ||  |||||||||||||| ||||||| |||||     
T  80834 ttcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaatacagcttcacaaataacagttaacatcttagataggtctcattag 80932  T
Q  176 tacc 179  Q
    ||||    
T  80933 tacc 80936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 80498 - 80559
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||  | |||||||||||    
T  80498 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagtagttcataacagc 80559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 61596 - 61560
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  61596 ttcaagtaatgcaatcaatcaataaatcacattataa 61560  T

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Target: scaffold0029; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 65512 - 65476
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  65512 ttcaagtaatgcaatcaatcaataaatcacattataa 65476  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 30730 - 30637
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtc 168  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||  | |||| |||| |||  |||||| |||||||||||||| |||||||    
T  30730 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagaagttca-aacaactttacagatttcagttaacatcttaaataggtc 30637  T

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Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 14410 - 14349
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  14410 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 14349  T

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Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 207825 - 207764
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  207825 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 207764  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 189700 - 189639
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  189700 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 189639  T

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Target: scaffold0177 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 13468 - 13369
Alignment:
Q  79 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactac 178  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| | ||| |  ||||||| |||||| ||||||| ||||| |||    
T  13468 aagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctacacagttatcagttaatatcttaaataggtctcattagtac 13370  T

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Target: scaffold0349 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 179
Target Start/End: Original strand, 12544 - 12646
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  12544 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 12642  T
Q  176 tacc 179  Q
    ||||    
T  12643 tacc 12646  T

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Target: scaffold0324 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 182 - 221
Target Start/End: Original strand, 15642 - 15681
Alignment:
Q  182 agggtccatctctaatcaaattatgcgacacagatcgcaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaa 15681  T

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Target: scaffold0228 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 18616 - 18555
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 138  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  18616 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttc 18555  T

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Target: scaffold0405 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 9642 - 9542
Alignment:
Q  83 aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaa 182  Q
    ||||| || ||||| ||||||||||||||||| |||||| ||||||||| |||||| ||| |  ||||||| |||||| ||||||| ||||| |||| ||    
T  9642 aatgcgatcaatcaataaatcacattataatc-acttaaaatttcataaaagcttcacagttctcagttaatatcttaaataggtctcattagtacctaa 9544  T
Q  183 gg 184  Q
    ||    
T  9543 gg 9542  T

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Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 6798 - 6859
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  6798 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 6859  T

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Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 32983 - 32922
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  32983 atttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 32922  T

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Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 31002 - 31063
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31002 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31063  T

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Target: scaffold0525 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 3859 - 3757
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 175  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||| | ||||||| |||||     
T  3859 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatctcagataggtctcattag 3761  T
Q  176 tacc 179  Q
    ||||    
T  3760 tacc 3757  T

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Target: scaffold0483 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 485 - 576
Alignment:
Q  109 ataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaa 200  Q
    ||||||| ||||| | ||||||||| |||| |||||| || ||||||||||||||||||| || ||||||| || | |||||  ||||||||    
T  485 ataatcagcttaatagttcataacaacttcacagatttcatttaacatcttatataggtctcactactacctaatgttccattcctaatcaa 576  T

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Target: scaffold0342 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 7253 - 7152
Alignment:
Q  77 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 176  Q
    |||||||||||| |||||| ||||||||||||| || ||  ||||| |||||||||||| || |||||  |||||||||||| | |||| ||| | ||||    
T  7253 tcaagtaatgcatttaatctttaaatcacattacaa-cagtttaacttttcataacagcctcacagatctcagttaacatctcacatagatcataatact 7155  T
Q  177 acc 179  Q
    |||    
T  7154 acc 7152  T

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Target: scaffold0293 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 20445 - 20391
Alignment:
Q  81 gtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    |||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20445 gtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20391  T

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Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 45272 - 45342
Alignment:
Q  109 ataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    ||||||| ||||| | ||||||||| |||| |||||| || ||||||||||||||||||| || |||||||    
T  45272 ataatcagcttaatagttcataacaacttcacagatttcatttaacatcttatataggtctcactactacc 45342  T

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Target: scaffold0109; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 36263 - 36202
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||    
T  36263 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcacaacagc 36202  T

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Target: scaffold0109; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 35927 - 35891
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  35927 ttcaagtaatgcaatcaatcaataaatcacattataa 35891  T

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Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 11824 - 11763
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 135  Q
    ||||| ||||||||| |||||||||||||| ||||| || ||||||| || |||||||||||    
T  11824 atttcgagtaatgcatttaatcattaaatcgcattaaaaacaacttagcagttcataacagc 11763  T

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Target: scaffold0120 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 19994 - 19899
Alignment:
Q  83 aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 179  Q
    |||||||| ||||| ||||||||||||||||| ||||||| |||||||| |||||| ||| |  || |||| |||||  ||||||| ||||| ||||    
T  19994 aatgcaatcaatcaataaatcacattataatc-acttaacgtttcataaaagcttcacagttctcaattaatatctttaataggtctcattagtacc 19899  T

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Target: scaffold1052 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 3035 - 3074
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  3035 atttcaagtaatgcatttaatcattaattcacattataat 3074  T

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Target: scaffold0410 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 11511 - 11558
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 123  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||||||    
T  11511 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaaca 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 10029 - 9990
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatcacattataat 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  10029 atttcaagtaatgcatttaatcattaattcacattataat 9990  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 73754 - 73725
Alignment:
Q  74 atttcaagtaatgcaattaatcattaaatc 103  Q
    ||||||||||||||||||||||||||||||    
T  73754 atttcaagtaatgcaattaatcattaaatc 73725  T

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Target: scaffold0372 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 5085 - 5049
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  5085 ttcaagtaatgcaatcaatcaataaatcacattataa 5049  T

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Target: scaffold0268 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 992 - 956
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  992 ttcaagtaatgcaatcaatcaataaatcacattataa 956  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 58703 - 58667
Alignment:
Q  76 ttcaagtaatgcaattaatcattaaatcacattataa 112  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  58703 ttcaagtaatgcaatcaatcaataaatcacattataa 58667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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