View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12054_high_1 (Length: 801)

Name: NF12054_high_1
Description: NF12054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12054_high_1
NF12054_high_1
[»] chr4 (55 HSPs)
chr4 (123-785)||(3669567-3670229)
chr4 (521-581)||(33790706-33790766)
chr4 (521-599)||(2066875-2066953)
chr4 (521-587)||(25141883-25141949)
chr4 (521-597)||(4972646-4972722)
chr4 (521-580)||(32884887-32884946)
chr4 (521-580)||(47464341-47464400)
chr4 (521-599)||(11907556-11907634)
chr4 (528-582)||(49175908-49175962)
chr4 (521-582)||(32469922-32469983)
chr4 (521-598)||(52859757-52859834)
chr4 (521-597)||(7061623-7061699)
chr4 (521-597)||(36985872-36985948)
chr4 (521-581)||(51625169-51625229)
chr4 (110-173)||(4406320-4406383)
chr4 (521-556)||(30192291-30192326)
chr4 (521-580)||(43237329-43237388)
chr4 (521-581)||(6609847-6609908)
chr4 (150-191)||(24275278-24275319)
chr4 (521-598)||(49428300-49428377)
chr4 (521-598)||(52247386-52247463)
chr4 (521-582)||(53412194-53412255)
chr4 (521-581)||(462044-462104)
chr4 (521-581)||(17114526-17114586)
chr4 (151-191)||(21004001-21004041)
chr4 (123-183)||(38381987-38382047)
chr4 (521-581)||(38405077-38405137)
chr4 (521-581)||(50263907-50263967)
chr4 (521-580)||(6643636-6643695)
chr4 (521-572)||(11288614-11288665)
chr4 (108-183)||(18626705-18626778)
chr4 (149-192)||(20542840-20542883)
chr4 (521-580)||(40122830-40122889)
chr4 (521-556)||(42517638-42517673)
chr4 (521-599)||(16411324-16411402)
chr4 (149-183)||(40952576-40952610)
chr4 (154-192)||(42013206-42013244)
chr4 (103-173)||(54508160-54508230)
chr4 (521-581)||(2653506-2653564)
chr4 (126-171)||(3511723-3511768)
chr4 (151-192)||(13743918-13743959)
chr4 (107-168)||(14450952-14451013)
chr4 (134-191)||(15641284-15641341)
chr4 (126-183)||(16468218-16468275)
chr4 (151-192)||(17028272-17028313)
chr4 (123-184)||(17657912-17657973)
chr4 (151-192)||(23329409-23329450)
chr4 (151-192)||(23710895-23710936)
chr4 (521-562)||(44536190-44536231)
chr4 (118-183)||(47308120-47308185)
chr4 (151-192)||(48042651-48042692)
chr4 (151-192)||(49745502-49745543)
chr4 (151-192)||(51126165-51126206)
chr4 (123-192)||(52281129-52281198)
chr4 (123-168)||(54713109-54713154)
[»] chr5 (37 HSPs)
chr5 (15-171)||(839327-839483)
chr5 (382-491)||(31614625-31614734)
chr5 (521-597)||(38508138-38508214)
chr5 (521-581)||(42922834-42922894)
chr5 (117-183)||(3100410-3100476)
chr5 (521-602)||(843523-843604)
chr5 (521-581)||(40900004-40900064)
chr5 (531-578)||(6753629-6753676)
chr5 (521-580)||(9515832-9515891)
chr5 (521-580)||(29570478-29570537)
chr5 (521-575)||(2232046-2232100)
chr5 (521-575)||(15818453-15818507)
chr5 (521-567)||(19930032-19930078)
chr5 (521-598)||(7827876-7827953)
chr5 (151-192)||(15966016-15966057)
chr5 (528-581)||(41478920-41478973)
chr5 (528-581)||(41492395-41492448)
chr5 (103-171)||(71250-71318)
chr5 (521-581)||(2588035-2588095)
chr5 (521-581)||(21060716-21060776)
chr5 (107-171)||(31691340-31691404)
chr5 (521-597)||(32440227-32440303)
chr5 (521-557)||(40530215-40530251)
chr5 (124-183)||(14153438-14153497)
chr5 (125-171)||(35032351-35032397)
chr5 (521-598)||(1248554-1248631)
chr5 (118-171)||(3100486-3100539)
chr5 (151-192)||(7336915-7336956)
chr5 (521-582)||(11796133-11796194)
chr5 (151-192)||(14274194-14274235)
chr5 (151-192)||(26168248-26168289)
chr5 (521-598)||(27542881-27542958)
chr5 (521-598)||(31655139-31655216)
chr5 (151-192)||(33545850-33545891)
chr5 (151-192)||(36346855-36346896)
chr5 (123-192)||(36897753-36897822)
chr5 (724-785)||(41272457-41272518)
[»] chr7 (57 HSPs)
chr7 (368-479)||(26331988-26332099)
chr7 (123-192)||(19688110-19688179)
chr7 (700-785)||(26331450-26331535)
chr7 (521-601)||(83478-83558)
chr7 (521-601)||(16560526-16560606)
chr7 (521-601)||(16605056-16605136)
chr7 (521-581)||(44180298-44180358)
chr7 (521-601)||(46211524-46211604)
chr7 (521-600)||(9786081-9786160)
chr7 (521-588)||(16904472-16904539)
chr7 (521-598)||(28202268-28202345)
chr7 (521-598)||(42935754-42935831)
chr7 (521-601)||(759048-759127)
chr7 (521-600)||(28103826-28103905)
chr7 (521-598)||(24516248-24516325)
chr7 (521-598)||(32018671-32018748)
chr7 (521-594)||(44424228-44424301)
chr7 (521-581)||(13962052-13962112)
chr7 (521-581)||(26974122-26974182)
chr7 (521-597)||(34100507-34100583)
chr7 (521-581)||(40076408-40076468)
chr7 (521-597)||(21390388-21390466)
chr7 (521-572)||(38391841-38391892)
chr7 (521-575)||(21759966-21760020)
chr7 (521-582)||(2459562-2459623)
chr7 (123-192)||(2943272-2943341)
chr7 (107-168)||(6455544-6455605)
chr7 (151-192)||(19532013-19532054)
chr7 (134-191)||(24934573-24934630)
chr7 (128-173)||(26385704-26385749)
chr7 (521-598)||(27904859-27904936)
chr7 (521-557)||(5524473-5524509)
chr7 (123-171)||(31813422-31813470)
chr7 (521-577)||(48608955-48609011)
chr7 (149-192)||(3498331-3498374)
chr7 (104-183)||(18113304-18113383)
chr7 (123-170)||(21886478-21886525)
chr7 (521-580)||(22738794-22738853)
chr7 (125-176)||(30138864-30138915)
chr7 (521-580)||(41506043-41506101)
chr7 (521-599)||(2850839-2850917)
chr7 (149-183)||(12171696-12171730)
chr7 (133-183)||(18534937-18534986)
chr7 (107-173)||(27554576-27554642)
chr7 (409-491)||(30394764-30394846)
chr7 (521-555)||(49101759-49101793)
chr7 (126-183)||(5689345-5689402)
chr7 (123-180)||(9555332-9555389)
chr7 (398-455)||(9606850-9606907)
chr7 (398-455)||(9834421-9834478)
chr7 (126-183)||(34275205-34275262)
chr7 (126-183)||(41872120-41872177)
chr7 (151-192)||(43067063-43067104)
chr7 (123-192)||(43813136-43813205)
chr7 (151-192)||(46221117-46221158)
chr7 (151-192)||(46477172-46477213)
chr7 (151-192)||(46578325-46578366)
[»] chr3 (40 HSPs)
chr3 (381-491)||(26966152-26966262)
chr3 (388-491)||(2057003-2057106)
chr3 (521-600)||(17652834-17652913)
chr3 (521-599)||(37497578-37497656)
chr3 (521-581)||(8679023-8679083)
chr3 (521-581)||(24569069-24569129)
chr3 (521-578)||(29023938-29023995)
chr3 (521-581)||(10366611-10366671)
chr3 (521-580)||(37312036-37312095)
chr3 (521-598)||(19823097-19823174)
chr3 (521-594)||(33491039-33491112)
chr3 (521-598)||(45710936-45711013)
chr3 (521-581)||(11905908-11905968)
chr3 (522-582)||(12736540-12736600)
chr3 (123-171)||(12744912-12744960)
chr3 (521-572)||(27471421-27471472)
chr3 (521-587)||(19609385-19609451)
chr3 (521-587)||(40462398-40462464)
chr3 (521-598)||(1778728-1778805)
chr3 (123-192)||(9170123-9170192)
chr3 (521-582)||(14194641-14194702)
chr3 (123-188)||(24596902-24596967)
chr3 (151-192)||(26770750-26770791)
chr3 (521-581)||(37695634-37695695)
chr3 (521-582)||(38795430-38795491)
chr3 (123-171)||(10872753-10872801)
chr3 (521-580)||(11632167-11632225)
chr3 (521-572)||(43253841-43253892)
chr3 (521-555)||(19611994-19612028)
chr3 (123-176)||(334741-334794)
chr3 (126-183)||(8439272-8439329)
chr3 (123-176)||(10841773-10841826)
chr3 (151-192)||(16127808-16127849)
chr3 (126-183)||(25881205-25881262)
chr3 (126-183)||(26104788-26104845)
chr3 (151-192)||(32833719-32833760)
chr3 (524-581)||(34957592-34957649)
chr3 (118-171)||(50466819-50466872)
chr3 (151-192)||(51256606-51256647)
chr3 (521-598)||(53560303-53560380)
[»] chr6 (28 HSPs)
chr6 (521-601)||(29363392-29363472)
chr6 (521-598)||(32440596-32440673)
chr6 (521-581)||(11655914-11655974)
chr6 (104-171)||(11637162-11637229)
chr6 (529-602)||(3291715-3291788)
chr6 (123-176)||(29418945-29418998)
chr6 (521-581)||(6802017-6802077)
chr6 (521-589)||(7920324-7920392)
chr6 (521-581)||(21010263-21010323)
chr6 (521-591)||(1063561-1063631)
chr6 (97-171)||(10258385-10258459)
chr6 (523-572)||(1781890-1781939)
chr6 (521-598)||(31894161-31894238)
chr6 (124-192)||(1302759-1302827)
chr6 (521-581)||(6834337-6834397)
chr6 (126-170)||(8146031-8146075)
chr6 (521-569)||(23142753-23142801)
chr6 (123-183)||(26527259-26527319)
chr6 (521-581)||(27448124-27448184)
chr6 (103-183)||(31398217-31398297)
chr6 (521-580)||(3720210-3720269)
chr6 (126-168)||(6560741-6560783)
chr6 (521-599)||(13087616-13087694)
chr6 (531-597)||(15058213-15058279)
chr6 (126-183)||(6560671-6560728)
chr6 (151-192)||(7418914-7418955)
chr6 (151-188)||(10731537-10731574)
chr6 (118-171)||(30916960-30917013)
[»] chr1 (47 HSPs)
chr1 (521-597)||(26093480-26093556)
chr1 (521-590)||(30754904-30754973)
chr1 (521-598)||(41080684-41080761)
chr1 (521-577)||(16395023-16395079)
chr1 (521-588)||(6160424-6160491)
chr1 (521-581)||(38787427-38787487)
chr1 (521-581)||(49223958-49224018)
chr1 (521-587)||(6267822-6267888)
chr1 (521-581)||(40144819-40144879)
chr1 (107-171)||(46412769-46412833)
chr1 (521-580)||(12039168-12039227)
chr1 (521-600)||(32970520-32970599)
chr1 (521-575)||(35367622-35367677)
chr1 (113-171)||(34953977-34954035)
chr1 (521-575)||(43500762-43500816)
chr1 (151-192)||(31909809-31909850)
chr1 (521-598)||(31978607-31978684)
chr1 (521-581)||(5179371-5179431)
chr1 (521-597)||(24991609-24991685)
chr1 (521-569)||(28749077-28749125)
chr1 (521-573)||(35538729-35538781)
chr1 (521-581)||(37506213-37506273)
chr1 (521-581)||(39864197-39864257)
chr1 (521-581)||(42410080-42410140)
chr1 (123-171)||(42761464-42761512)
chr1 (521-581)||(45331427-45331487)
chr1 (107-183)||(49586158-49586234)
chr1 (113-164)||(4972646-4972697)
chr1 (521-572)||(21909987-21910038)
chr1 (521-580)||(23168966-23169025)
chr1 (123-173)||(3013621-3013671)
chr1 (533-587)||(7439881-7439935)
chr1 (521-599)||(13579575-13579653)
chr1 (107-173)||(19175667-19175733)
chr1 (151-192)||(5852727-5852768)
chr1 (126-183)||(6283604-6283661)
chr1 (151-188)||(15278629-15278666)
chr1 (151-192)||(15311532-15311573)
chr1 (521-581)||(15699208-15699269)
chr1 (123-192)||(23394750-23394819)
chr1 (151-192)||(24478725-24478766)
chr1 (151-192)||(33738223-33738264)
chr1 (126-183)||(36040160-36040217)
chr1 (151-192)||(38824330-38824371)
chr1 (151-192)||(38847362-38847403)
chr1 (123-192)||(44673946-44674014)
chr1 (151-192)||(46518005-46518046)
[»] chr8 (31 HSPs)
chr8 (521-598)||(39482701-39482778)
chr8 (521-581)||(36967447-36967507)
chr8 (521-599)||(40996317-40996395)
chr8 (521-581)||(51198-51258)
chr8 (521-597)||(45425620-45425696)
chr8 (521-600)||(39405848-39405927)
chr8 (521-602)||(13335302-13335383)
chr8 (123-171)||(10117051-10117099)
chr8 (529-581)||(17719228-17719280)
chr8 (521-581)||(32678804-32678864)
chr8 (107-167)||(33385256-33385316)
chr8 (521-580)||(6611783-6611842)
chr8 (524-575)||(26626088-26626139)
chr8 (521-575)||(1875568-1875622)
chr8 (521-582)||(4428321-4428381)
chr8 (123-192)||(10934614-10934683)
chr8 (123-164)||(13290046-13290087)
chr8 (521-570)||(29226212-29226261)
chr8 (521-581)||(10097961-10098021)
chr8 (521-581)||(31271107-31271167)
chr8 (127-183)||(34326260-34326316)
chr8 (521-581)||(34393924-34393984)
chr8 (521-597)||(34948641-34948717)
chr8 (149-192)||(42631816-42631859)
chr8 (126-172)||(31810414-31810460)
chr8 (521-570)||(9300094-9300143)
chr8 (521-578)||(12559679-12559735)
chr8 (521-574)||(21216078-21216131)
chr8 (126-183)||(24053611-24053668)
chr8 (126-183)||(31505107-31505164)
chr8 (151-192)||(34194620-34194661)
[»] chr2 (45 HSPs)
chr2 (107-183)||(21488096-21488172)
chr2 (521-581)||(16463775-16463835)
chr2 (521-582)||(18853166-18853227)
chr2 (521-582)||(19937763-19937824)
chr2 (521-598)||(39785674-39785751)
chr2 (521-581)||(15359054-15359114)
chr2 (521-597)||(17695416-17695492)
chr2 (521-597)||(25637567-25637642)
chr2 (521-581)||(36794370-36794430)
chr2 (521-581)||(39691576-39691636)
chr2 (521-581)||(45235667-45235727)
chr2 (521-592)||(10005081-10005151)
chr2 (521-576)||(31448665-31448720)
chr2 (521-602)||(37322514-37322596)
chr2 (151-192)||(324835-324876)
chr2 (139-192)||(10041569-10041622)
chr2 (126-183)||(24457114-24457171)
chr2 (521-570)||(26607946-26607995)
chr2 (123-176)||(27331835-27331888)
chr2 (521-598)||(36354393-36354470)
chr2 (123-176)||(38181836-38181889)
chr2 (529-581)||(5272160-5272212)
chr2 (107-183)||(31102018-31102094)
chr2 (521-581)||(34120406-34120466)
chr2 (107-171)||(38465870-38465934)
chr2 (521-597)||(39443799-39443875)
chr2 (521-580)||(3323254-3323313)
chr2 (149-192)||(4637067-4637110)
chr2 (149-192)||(9071242-9071285)
chr2 (125-173)||(11153216-11153266)
chr2 (149-192)||(32473508-32473551)
chr2 (114-173)||(40187322-40187381)
chr2 (114-181)||(41824263-41824330)
chr2 (522-572)||(16377632-16377682)
chr2 (125-171)||(26003516-26003562)
chr2 (149-183)||(27743685-27743719)
chr2 (521-598)||(41220895-41220973)
chr2 (151-192)||(5144307-5144348)
chr2 (126-183)||(9431211-9431268)
chr2 (151-192)||(10099591-10099632)
chr2 (126-175)||(14308723-14308772)
chr2 (151-192)||(17378115-17378156)
chr2 (151-192)||(30905184-30905225)
chr2 (521-601)||(35313973-35314054)
chr2 (123-168)||(43732149-43732194)
[»] scaffold0110 (1 HSPs)
scaffold0110 (521-581)||(1790-1850)
[»] scaffold0095 (1 HSPs)
scaffold0095 (521-600)||(50290-50369)
[»] scaffold0020 (1 HSPs)
scaffold0020 (126-183)||(139365-139422)
[»] scaffold0294 (1 HSPs)
scaffold0294 (521-597)||(17121-17197)
[»] scaffold0470 (1 HSPs)
scaffold0470 (521-580)||(1071-1130)
[»] scaffold0635 (1 HSPs)
scaffold0635 (139-192)||(5448-5501)
[»] scaffold0050 (2 HSPs)
scaffold0050 (107-168)||(6208-6269)
scaffold0050 (107-173)||(6292-6358)
[»] scaffold1391 (1 HSPs)
scaffold1391 (521-581)||(1786-1846)
[»] scaffold0340 (1 HSPs)
scaffold0340 (151-191)||(14094-14134)
[»] scaffold0018 (1 HSPs)
scaffold0018 (521-597)||(135990-136066)
[»] scaffold0003 (1 HSPs)
scaffold0003 (521-581)||(39174-39234)
[»] scaffold0302 (1 HSPs)
scaffold0302 (521-580)||(16184-16243)
[»] scaffold0012 (1 HSPs)
scaffold0012 (521-571)||(105770-105820)
[»] scaffold0464 (1 HSPs)
scaffold0464 (522-575)||(6260-6313)
[»] scaffold0328 (1 HSPs)
scaffold0328 (520-581)||(7950-8011)
[»] scaffold0121 (1 HSPs)
scaffold0121 (151-192)||(17494-17535)
[»] scaffold0011 (1 HSPs)
scaffold0011 (151-192)||(239-280)


Alignment Details
Target: chr4 (Bit Score: 594; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 594; E-Value: 0
Query Start/End: Original strand, 123 - 785
Target Start/End: Original strand, 3669567 - 3670229
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccaccctctagtttataatagtgacaggagggtg 222  Q
    ||||||||||||| | ||| ||||  |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3669567 tattataagcaaatatttatattttagattcattcaattaatgacgtatgtagtttataatgtagaccaccctctggtttataatagtgacaggagggtg 3669666  T
Q  223 tannnnnnngtgcttgcaatgctaatttgcatgaagtaccaatatatatttttgaggttgatttcaatatcactaatttatgattcttattattgtagga 322  Q
    ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669667 tatttttttgtgcttgcaatgctaatttgcatgaagtaccaatatatatttttgaggttgatttcaatatcactaatttatgattcttattattgtagga 3669766  T
Q  323 aaggagagaatgaaaatgatagctattcttactccacagaagggtgtagaactcttaaggaaccaagagttgtggttcaaactacaagtgaaattgatat 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3669767 aaggagagaatgaaaatgatagctattcttactccacagaagggtgtagaactgttaaggaaccaagagttgtggttcaaactacaagtgaaattgatat 3669866  T
Q  423 tcttgatgatggatataggtggaggaaatatggacagaaagtagttaaaggaaatccaaacccaaggtatgcaaataattcaaattatggaaacaaacaa 522  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669867 tcttgatgatggatataggtggaggaaatatggacagaaagtagttaaaggaaatccaaacccaaggtatgcaaataattcaaattatggaaacaaacaa 3669966  T
Q  523 atcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatttaacttcggagttctagatattt 622  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3669967 atcaacacaattaatcatttttttaaaaatcatgcataaatcttaaacgactattattttcagacagatggagtatttaacttcggagttctagatattt 3670066  T
Q  623 gttaccaaccctatatgataataacttgttcaaaatattgtttttgcaggagctactacaaatgtgtaatccaaggttgtactgtgagaaaacatgttga 722  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3670067 gttagcaaccctatatgataataacttgttcaaaatattgtttttgcaggagctactacaaatgtgtaatccaaggttgtactgtgagaaaacatgttga 3670166  T
Q  723 gagagcagcacatgatattaaagcagtaatcacaacatatgaagggaaacataaccatgatgt 785  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3670167 gagagcagcacatgatattaaagcagtaatcacaacatatgaagggaaacataaccatgatgt 3670229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 33790766 - 33790706
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  33790766 aaatcaacacaattaatcattttcttaataatcgtgcataaaccttaaacgactattattt 33790706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 521 - 599
Target Start/End: Original strand, 2066875 - 2066953
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    |||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||  |||  |||||||||||    
T  2066875 aaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattatttaaagatggatggagtatt 2066953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 25141949 - 25141883
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagac 587  Q
    ||||||||||| |||||||||||||||||||||||   |||| ||||||||||||||||||| ||||    
T  25141949 aaatcaacacatttaatcattttcttaaaaatcgtatataaaccttaaacgactattattttaagac 25141883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 4972646 - 4972722
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    ||||||||||||||||||||||  |||| ||||||||  |||||||||||||||| |||| | |||| |||||||||    
T  4972646 aaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaacgactaatattgtgagacggatggagta 4972722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 32884887 - 32884946
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||||||||| ||||||||  ||| |||||||||||| ||||    
T  32884887 aaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactaatatt 32884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 47464400 - 47464341
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||    
T  47464400 aaatcaacacaattaatcatttccttaataatcgtgctcaaaccttaaacgactaatatt 47464341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 11907634 - 11907556
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    |||||||||||||||||||||| ||||| |||||||| | || |||||| |||||||||||  |||| || ||||||||    
T  11907634 aaatcaacacaattaatcatttccttaataatcgtgcattaaccttaaatgactattatttagagacggagggagtatt 11907556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 582
Target Start/End: Complemental strand, 49175962 - 49175908
Alignment:
Q  528 cacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||||||||||||||||| |||  ||| |||||||||||||||||||    
T  49175962 cacaattaatcattttcttaaaaatcatgcacaaaccttaaacgactattatttt 49175908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 32469983 - 32469922
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||||||||||||||||| |||||  ||| |||||||||||| | |||||||||    
T  32469983 aaatcaacacaattaatcattttctttaaaattatgcataaatcttaaacaaatattatttt 32469922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 52859834 - 52859757
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||| ||||| |||||||| |||  ||||| ||||||||||||  |||| || |||||||    
T  52859834 aaatcaacacaattaatcatttccttaataatcgtgcataagccttaagcgactattatttagagacggagggagtat 52859757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 7061699 - 7061623
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||| ||||| |||||||   ||| |||||||||||| |||| | ||||||| ||||||    
T  7061699 aaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacagagggagta 7061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 36985872 - 36985948
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||| || |||||||||    ||||||||||||| ||||||||| |||| || ||||||    
T  36985872 aaatcaacacaattaatcatttcctgaaaaatcgtataaaaatcttaaacgagtattattttgagacggagggagta 36985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 51625169 - 51625229
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| ||||||||  |||  |||||||||||| ||||    
T  51625169 aaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgactataattt 51625229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 4406383 - 4406320
Alignment:
Q  110 actctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    ||||| || ||| ||||||||||||||| ||| ||||  |||||||||||||||||||||||||    
T  4406383 actcttcagtcattattataagcaaaaatttatattttggattcattcaattaatgatgtatgt 4406320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 30192291 - 30192326
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtg 556  Q
    ||||||||||||||||||||||||||||||||||||    
T  30192291 aaatcaacacaattaatcattttcttaaaaatcgtg 30192326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 43237329 - 43237388
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||| ||||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||    
T  43237329 aaataaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactaatatt 43237388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 6609847 - 6609908
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacg-actattattt 581  Q
    |||||||||||||||||||||| ||||| |||||||| ||||  ||||||| ||||||||||    
T  6609847 aaatcaacacaattaatcatttccttaataatcgtgcataaactttaaacgaactattattt 6609908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 24275319 - 24275278
Alignment:
Q  150 attcattcaattaatgatgtatgtagtttataatgtagacca 191  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  24275319 attcattcaattaatgatgtatgtggtctataatgtagacca 24275278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 49428377 - 49428300
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||| ||||||||| ||||| ||||||||  ||| ||||||||||||| ||||  |||| || |||||||    
T  49428377 aaatcaacacaaataatcatttccttaataatcgtgcaaaaaccttaaacgactataatttagagacggagggagtat 49428300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 52247463 - 52247386
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||| ||||||||||||||||||||||| ||||||||  ||  ||||||||||||| ||||  |||| || |||||||    
T  52247463 aaattaacacaattaatcattttcttaataatcgtgcacaatccttaaacgactataatttagagacggagggagtat 52247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 53412194 - 53412255
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    ||||||| | |||||||| |||||||||||||||| | |||||| ||||| |||||||||||    
T  53412194 aaatcaataaaattaatcgttttcttaaaaatcgtacgtaaatcgtaaacaactattatttt 53412255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 462044 - 462104
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||| ||||||||||||||||||||||||  |||  ||||||||||  ||||||||||    
T  462044 aaatcaatacaattaatcattttcttaaaaattatgcacaaatcttaaattactattattt 462104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 17114526 - 17114586
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||  |||| | || ||||||||||||||||||    
T  17114526 aaatcaacacaattaatcatttccttaataactgtgcatcaaccttaaacgactattattt 17114586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 21004041 - 21004001
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagacca 191  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  21004041 ttcattcaattaatgatgtatgtggtctataatgtagacca 21004001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 38381987 - 38382047
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||||| ||||||||  |||||||| | | |||||||||||| |||||||||    
T  38381987 tattataagcaaaaatttacattttagattcattgattaaatgatgtatgtggtttataat 38382047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 38405137 - 38405077
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||| |||||||||||| ||||| ||||||||  ||| ||||||||||||| ||||    
T  38405137 aaatcaacagaattaatcatttccttaataatcgtgcacaaaccttaaacgactataattt 38405077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 50263967 - 50263907
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||| | |||||||||||||| ||||||||  ||| ||||||||||||| ||||    
T  50263967 aaatcaacacagtgaatcattttcttaataatcgtgcacaaaccttaaacgactataattt 50263907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 6643695 - 6643636
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||| ||||| ||||||||| |||  |||||| |||| ||||    
T  6643695 aaatcaacacaattaatcatttccttaataatcgtgctcaaacattaaactactaatatt 6643636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 572
Target Start/End: Complemental strand, 11288665 - 11288614
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    ||||||| |||||||||||||||||||| |||||| | |||| |||||||||    
T  11288665 aaatcaatacaattaatcattttcttaataatcgtacataaaccttaaacga 11288614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 18626705 - 18626778
Alignment:
Q  108 acactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||| ||||| ||||||||||||||| |||  |||| |||||||||| | |||||||||||| |||||||||    
T  18626705 acactctctaatcactattataagcaaaaa-ttaatttta-gattcattcattaaatgatgtatgtggtttataat 18626778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 20542840 - 20542883
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||    
T  20542840 gattcattcaattaatgatgtatgtgggttataatatagaccac 20542883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 40122889 - 40122830
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||| ||||||||||||| ||||| ||||||||  ||| |||||||||||| ||||    
T  40122889 aaatcaacgcaattaatcatttccttaataatcgtgcacaaagcttaaacgactaatatt 40122830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Complemental strand, 42517673 - 42517638
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtg 556  Q
    |||||||||||||||||||||||||||| |||||||    
T  42517673 aaatcaacacaattaatcattttcttaataatcgtg 42517638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 16411402 - 16411324
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    ||||||||| ||||||| |||||||| ||||  | ||  ||||||||||||||||| | ||| ||||||||||| ||||    
T  16411402 aaatcaacataattaattattttctttaaaactgggcacaaatcttaaacgactatcagtttgagacagatggaatatt 16411324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 40952576 - 40952610
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||||||||||||||||||| ||||||    
T  40952576 gattcattcaattaatgatgtatgtagtctataat 40952610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 42013244 - 42013206
Alignment:
Q  154 attcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  42013244 attcaattaatgatgtatgtggtttataatatagaccac 42013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 54508160 - 54508230
Alignment:
Q  103 aaactacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    ||||||||| |||| ||||  | |||||||||||| ||| ||||  |||||||||||| ||||||||||||    
T  54508160 aaactacaccctccgatcataaatataagcaaaaatttatattttagattcattcaataaatgatgtatgt 54508230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 2653506 - 2653564
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||||||  |||| |||| |||  ||||||||||| ||||||||||    
T  2653506 aaatcaacacaattaatcattt--ttaataatcatgcacaaatcttaaacaactattattt 2653564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 3511723 - 3511768
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||||||||||  ||||||||  |||||||||||||||||||||||    
T  3511723 tataagcaaaactttacattttagattcattcaattaatgatgtat 3511768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 13743959 - 13743918
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  13743959 ttcattcaattaatgatgtatgtggtttataatatggaccac 13743918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 14450952 - 14451013
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatg 168  Q
    ||||| |||| |||| |||||||||||||||  |||||||  |||||||||| |||||||||    
T  14450952 tacaccctccgatcactattataagcaaaaatctacattttagattcattcatttaatgatg 14451013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 15641341 - 15641284
Alignment:
Q  134 aaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagacca 191  Q
    ||||||||| |||  | |||||||| |||||||||||||||||| ||||| |||||||    
T  15641341 aaaaattactttttaggttcattcatttaatgatgtatgtagttcataatatagacca 15641284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 16468218 - 16468275
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||||||||||||  | |||||| | |||||||||||||| || ||||||    
T  16468218 tataagcaaaaaattacattttaggttcatttatttaatgatgtatgtggtctataat 16468275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 17028272 - 17028313
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||| ||||||||||||||| | ||||||    
T  17028272 ttcattcaattaatgatatatgtagtttataatatggaccac 17028313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 17657912 - 17657973
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatg 184  Q
    ||||||||||||||| | |||| | || |||||| ||| |||||||||||||||| ||||||    
T  17657912 tattataagcaaaaactcacatatttggttcattgaataaatgatgtatgtagttgataatg 17657973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 23329409 - 23329450
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  23329409 ttcattcaattaatgatgtatgtggtttataatatggaccac 23329450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 23710936 - 23710895
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  23710936 ttcattcaattaatgatgtatgtggtttataatatggaccac 23710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Complemental strand, 44536231 - 44536190
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaa 562  Q
    |||||||||||||||||||||| ||||| |||||||| ||||    
T  44536231 aaatcaacacaattaatcatttccttaataatcgtgcataaa 44536190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 47308120 - 47308185
Alignment:
Q  118 atcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||| |||||||||||||||   ||||||  |||||||||| |||||||||||| | |||||||||    
T  47308120 atcactattataagcaaaaatcaacattttggattcattcatttaatgatgtatatggtttataat 47308185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 48042692 - 48042651
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||||| ||| | ||||||||    
T  48042692 ttcattcaattaatgatgtatgtagttcatattatagaccac 48042651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 49745502 - 49745543
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  49745502 ttcattcaattaatgatgtatgtggtttataatatggaccac 49745543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 51126206 - 51126165
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| || |||||| ||||||||    
T  51126206 ttcattcaattaatgatgtatgtggtctataatatagaccac 51126165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 52281129 - 52281198
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||||||||||  | |||||   ||||||||||| ||||||||||||||| ||||||  |||||||    
T  52281129 tattataagcaaaaatatgcattttatattcattcaataaatgatgtatgtagtatataataaagaccac 52281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 54713109 - 54713154
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatg 168  Q
    ||||||||||||||| ||||||||  |||||||||| |||||||||    
T  54713109 tattataagcaaaaatttacattttagattcattcatttaatgatg 54713154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 3e-78; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 839483 - 839327
Alignment:
Q  15 cagagagagttaaaaaatgagatatatggttcaaactaacatgggactgggagagatcaaattacctgaccatcgataagtcttttttaaactacactct 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  839483 cagaaagagttaaaaaatgagatatatggttcaaactaacatgggactgggagagatcaaattacctgaccatcgataagttttttttaaactacactct 839384  T
Q  115 ccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  839383 ccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 839327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 491
Target Start/End: Complemental strand, 31614734 - 31614625
Alignment:
Q  382 gaaccaagagttgtggttcaaactacaagtgaaattgatattcttgatgatggatataggtggaggaaatatggacagaaagtagttaaaggaaatccaa 481  Q
    ||||| |||||||| ||||| || |||||||| |||||||| || |||||||| || || ||||||||||||||||||||||| ||||| || |||||||    
T  31614734 gaacctagagttgtagttcagacaacaagtgacattgatatcctggatgatggttacagatggaggaaatatggacagaaagttgttaagggcaatccaa 31614635  T
Q  482 acccaaggta 491  Q
    | ||||||||    
T  31614634 atccaaggta 31614625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 38508214 - 38508138
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||| |||||||||    
T  38508214 aaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaaacgactattattttgagacggatggagta 38508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 42922894 - 42922834
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| |||| |||  ||||||||||||||||| ||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgactataattt 42922834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 3100410 - 3100476
Alignment:
Q  117 aatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||| ||||||||||||||| | ||||||  |||||||||||| ||||||||||||||| ||||||    
T  3100410 aatcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctataat 3100476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 843523 - 843604
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatttaa 602  Q
    ||||||||| |||||||||||||||||| ||||||||  ||| ||||||| | ||||||| | |||| || |||||||||||    
T  843523 aaatcaacaaaattaatcattttcttaataatcgtgcacaaaccttaaacaattattattgtgagacggagggagtatttaa 843604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 40900004 - 40900064
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| || ||||| |||| |||||| |||||||||||    
T  40900004 aaatcaacacaattaatcatttccttaataaccgtgcataaaccttaaatgactattattt 40900064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 6753676 - 6753629
Alignment:
Q  531 aattaatcattttcttaaaaatcgtgcttaaatcttaaacgactatta 578  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||    
T  6753676 aattaatcattttcttaataatcgtgcataaaccttaaacgactatta 6753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 9515832 - 9515891
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||||||||||||||| |||||| ||||||||  ||| |||||||||||| ||||    
T  9515832 aaatcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacgactaatatt 9515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 29570478 - 29570537
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||||||||||||||||  |||| ||||||||  |||||||||||||||| ||||    
T  29570478 aaatcaacacaattaatcatttctttaataatcgtgcacaaatcttaaacgactaatatt 29570537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 2232100 - 2232046
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    ||||||||||||||| |||||||||||| ||||||||  ||| ||||||||||||    
T  2232100 aaatcaacacaattattcattttcttaataatcgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 15818507 - 15818453
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    |||||||||||||||| ||||| ||||| |||||||| |||| ||||||||||||    
T  15818507 aaatcaacacaattaaacatttccttaataatcgtgcataaaccttaaacgacta 15818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 567
Target Start/End: Original strand, 19930032 - 19930078
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatctta 567  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||||    
T  19930032 aaatcaacaaaattaatcattttcttaataatcgtgcataaatctta 19930078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 7827953 - 7827876
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||||||| |||||||||| |||||||   ||| ||||||||| ||||||||  |||| || |||||||    
T  7827953 aaatcaacacaattaattattttcttaataatcgtgtacaaaccttaaacgattattatttagagacggagggagtat 7827876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 15966057 - 15966016
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  15966057 ttcattcaattaatgatgtatgtggtttataatatagaccac 15966016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 41478920 - 41478973
Alignment:
Q  528 cacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||||||||||| ||  ||| |||| |||||||||||||    
T  41478920 cacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattattt 41478973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 41492395 - 41492448
Alignment:
Q  528 cacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||||||||||| ||  ||| |||| |||||||||||||    
T  41492395 cacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattattt 41492448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 71250 - 71318
Alignment:
Q  103 aaactacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||| ||||  ||| |||||||||||||||  || ||||  |||||||||||||||||||||||    
T  71250 aaactacaccctccggtcactattataagcaaaaatctatattttagattcattcaattaatgatgtat 71318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 2588095 - 2588035
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||  |||| | || ||||||||||||||||||    
T  2588095 aaatcaacacaattaatcatttccttaataactgtgcatcaaccttaaacgactattattt 2588035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 21060716 - 21060776
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||| ||||||||||||||||| | ||| || ||||| |||| ||||||||||||||||||    
T  21060716 aaataaacacaattaatcatttccctaataaccgtgcataaaccttaaacgactattattt 21060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 31691404 - 31691340
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||| |||| |||| ||||||||| ||||| ||| ||||  |||||||||||||||||||||||    
T  31691404 tacacactccgatcactattataagtaaaaatttatatttgagattcattcaattaatgatgtat 31691340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 32440227 - 32440303
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||| |||||||||||||||||  ||||||||| |||  ||| ||| ||||||||||||||| |||| || ||||||    
T  32440227 aaattaacacaattaatcatttctttaaaaatcatgcacaaacctttaacgactattattttgagacggagggagta 32440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 557
Target Start/End: Complemental strand, 40530251 - 40530215
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgc 557  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40530251 aaatcaacacaattaatcattttcttaataatcgtgc 40530215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 14153497 - 14153438
Alignment:
Q  124 attataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||||||||||||||  | |||||||| |||||||| ||||| || ||||||    
T  14153497 attataagcaaaaaattacattttaggttcattcatttaatgatatatgtggtctataat 14153438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 35032397 - 35032351
Alignment:
Q  125 ttataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||||||| ||||||||  |||||||||||||||| ||||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaattatgtat 35032351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 1248631 - 1248554
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||| ||||||| |||| ||||| || |||||  |||||||||||||||||| |||  |||| |||| |||||    
T  1248631 aaatcaacataattaataatttccttaataaccgtgcacaaatcttaaacgactattttttaaagacggatgaagtat 1248554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 3100539 - 3100486
Alignment:
Q  118 atcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||| |||||||||  |||| ||||||||  |||||||||||||||||||||||    
T  3100539 atcactattataagtgaaaatttacattttagattcattcaattaatgatgtat 3100486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 7336956 - 7336915
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  7336956 ttcattcaattaatgatgtatgtggtttataatatggaccac 7336915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 11796194 - 11796133
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||||||| ||||||||| || || ||||  ||| ||||||| |||||||||||    
T  11796194 aaatcaacacaattaaccattttctttaacattgtgcgcaaaccttaaaccactattatttt 11796133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 14274235 - 14274194
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||| |||||||||||||||||||||||| | ||||||    
T  14274235 ttcattcatttaatgatgtatgtagtttataatatggaccac 14274194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 26168289 - 26168248
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  26168289 ttcattcaattaatgatgtatgtggtttataatatggaccac 26168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 27542881 - 27542958
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||| |||||||| ||||| ||||||||  ||| |||||||||| || ||||  ||||  |||||||||    
T  27542881 aaatcaacacaatcaatcatttccttaataatcgtgcacaaaccttaaacgacaataatttagagacgaatggagtat 27542958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 31655139 - 31655216
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||||||||||||  |||| |||||| |  |||  ||||||||||| |||| | |||| ||||||||||    
T  31655139 aaatcaacacaattaatcatttctttaataatcgtacacaaactttaaacgactaatattgtgagaccgatggagtat 31655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 33545850 - 33545891
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||| |||||||||||||||||| ||||| ||||||||    
T  33545850 ttcattcatttaatgatgtatgtagttcataatatagaccac 33545891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 36346896 - 36346855
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  36346896 ttcattcaattaatgatgtatgtggtttataatatggaccac 36346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 36897753 - 36897822
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||| ||||| ||||||||   ||||||| ||| |||||||||||| |||||||||  |||||||    
T  36897753 tattataagtaaaaatttacattttaaattcattaaataaatgatgtatgtggtttataataaagaccac 36897822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 785
Target Start/End: Original strand, 41272457 - 41272518
Alignment:
Q  724 agagcagcacatgatattaaagcagtaatcacaacatatgaagggaaacataaccatgatgt 785  Q
    |||||| ||||||||   ||||| |||||||||||||||||||| ||||| || ||||||||    
T  41272457 agagcatcacatgatccgaaagctgtaatcacaacatatgaaggcaaacacaatcatgatgt 41272518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 1e-34; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 368 - 479
Target Start/End: Complemental strand, 26332099 - 26331988
Alignment:
Q  368 gtagaactcttaaggaaccaagagttgtggttcaaactacaagtgaaattgatattcttgatgatggatataggtggaggaaatatggacagaaagtagt 467  Q
    |||||||| |||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||| ||    
T  26332099 gtagaactgttaaagaacctagagttgtagttcaaactacaagtgaaattgatatccttgatgatggctttaggtggaggaaatatggacaaaaagttgt 26332000  T
Q  468 taaaggaaatcc 479  Q
    ||||||||||||    
T  26331999 taaaggaaatcc 26331988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 19688110 - 19688179
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||||||||||| |||||||  | |||||||||| ||||||||||||||||||| |||||||||||    
T  19688110 tattataagcaaaaaaatacattttaggttcattcaataaatgatgtatgtagtttattatgtagaccac 19688179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 700 - 785
Target Start/End: Complemental strand, 26331535 - 26331450
Alignment:
Q  700 tgtactgtgagaaaacatgttgagagagcagcacatgatattaaagcagtaatcacaacatatgaagggaaacataaccatgatgt 785  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||||| || |||||||| || ||||||||||| ||||| |||||    
T  26331535 tgtaatgtgagaaaacatgttgaaagagctgcacatgatatcaaagccgtgatcacaacttacgaagggaaacacaaccacgatgt 26331450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 83478 - 83558
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattta 601  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||||  |||| || ||||||||||    
T  83478 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacgactattatttagagacggagggagtattta 83558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 601
Target Start/End: Complemental strand, 16560606 - 16560526
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattta 601  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||  |||| || ||||||||||    
T  16560606 aaataaacacaattaatcatttccttaataatcgtgcataaatcttaaatgactattatttagagacggagggagtattta 16560526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 16605056 - 16605136
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattta 601  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||  |||| || ||||||||||    
T  16605056 aaataaacacaattaatcatttccttaataatcgtgcataaatcttaaatgactattatttagagacggagggagtattta 16605136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 44180298 - 44180358
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||    
T  44180298 aaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattattt 44180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 46211524 - 46211604
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattta 601  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||||  |||| || ||||||||||    
T  46211524 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtattta 46211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 9786081 - 9786160
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattt 600  Q
    |||||||||||||||||||||| ||||| ||||||||  | | ||||||||||||||||||  |||| ||||||||||||    
T  9786081 aaatcaacacaattaatcatttccttaataatcgtgcacagaccttaaacgactattatttagagacggatggagtattt 9786160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 16904472 - 16904539
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagaca 588  Q
    ||||||||||||||||||||||||||||||||  |||  ||| ||||||||||||||||||| |||||    
T  16904472 aaatcaacacaattaatcattttcttaaaaattttgcacaaaccttaaacgactattattttgagaca 16904539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 28202345 - 28202268
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||||||| |||||||||| || ||||| |||| ||||||| ||||||||||  |||| ||||||||||    
T  28202345 aaatcaacacaattaattattttcttaataaccgtgcataaaccttaaacaactattatttagagacggatggagtat 28202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 42935754 - 42935831
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||||||||| || ||||| | || ||||||||||||||||||  |||| ||| ||||||    
T  42935754 aaatcaacacaattaatcattttcttaataaccgtgcatcaaccttaaacgactattatttagagacggatagagtat 42935831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 601
Target Start/End: Complemental strand, 759127 - 759048
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattta 601  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||| |||||||||||  ||||| ||||||||||||    
T  759127 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaatgactattatttagagaca-atggagtattta 759048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 28103826 - 28103905
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattt 600  Q
    |||||||||||||||||||||||||||| ||||||||  ||| |||||||||| | |||| | |||| || |||||||||    
T  28103826 aaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagtattt 28103905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 24516325 - 24516248
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||||||||||||| |||| |||||||  |||| ||||||||||||  ||| | ||||||| |||||||    
T  24516325 aaatcaacacaattaatcattttattaataatcgtgtataaaccttaaacgactaaaattatgagacagagggagtat 24516248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 32018748 - 32018671
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||||| ||||||  ||||||||||| |  |||| ||||| |||||||||||| ||||| |||||||||    
T  32018748 aaatcaacacaattattcatttcattaaaaatcgtacaaaaattttaaatgactattattttaagacaaatggagtat 32018671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 44424228 - 44424301
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatgga 594  Q
    |||||||||||||||||||||| ||||| || ||||| | || ||||||||||||||||||  |||| ||||||    
T  44424228 aaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacgactattatttagagacggatgga 44424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 13962052 - 13962112
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| || ||||| |||| |||||| |||||||||||    
T  13962052 aaatcaacacaattaatcatttccttaataaacgtgcataaaccttaaatgactattattt 13962112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 26974122 - 26974182
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| ||||||||||||| ||||    
T  26974122 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataattt 26974182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 34100583 - 34100507
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||||||||| ||||||    ||||||||||| |||| |||| | |||| |||||||||    
T  34100583 aaatcaacacaattaatcattttcttaataatcgttgacaaatcttaaacaactaatattgtgagacggatggagta 34100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 40076408 - 40076468
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||| |||||||||||||||||  |||| |||||||| |||| ||||||||||||||||||    
T  40076408 aaattaacacaattaatcatttctttaataatcgtgcataaaccttaaacgactattattt 40076468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 21390388 - 21390466
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgac--tattattttcagacagatggagta 597  Q
    |||| ||||||||||||||||| ||||| |||||||| |||| ||||||||||  ||||||||  |||| |||||||||    
T  21390388 aaattaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactgtattatttagagacggatggagta 21390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 572
Target Start/End: Original strand, 38391841 - 38391892
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||    
T  38391841 aaatcaacacaattaatcattttcttaataattgtgcataaaccttaaacga 38391892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 21760020 - 21759966
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    |||||||||||||||||||||||||||| |||| |||  ||| ||||||||||||    
T  21760020 aaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 2459562 - 2459623
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||||||||||||| ||||| ||||||||  |||  ||||||||||| ||||||    
T  2459562 aaatcaacacaattaatcatttccttaataatcgtgcacaaacattaaacgactaatatttt 2459623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 2943341 - 2943272
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||| ||||   ||||||||||||||| ||||||||| | | || ||||||||||    
T  2943341 tattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccac 2943272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 6455544 - 6455605
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatg 168  Q
    ||||| |||| |||| ||||||||||||||| ||||||||  |||||||||| |||||||||    
T  6455544 tacaccctccgatcactattataagcaaaaatttacattttagattcattcatttaatgatg 6455605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 19532054 - 19532013
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  19532054 ttcattcaattaatgatgtatgtagtttataatatggaccac 19532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 24934573 - 24934630
Alignment:
Q  134 aaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagacca 191  Q
    |||| ||||||||  | |||||||||| |||||||||||| |||||||||||||||||    
T  24934573 aaaatttacattttaggttcattcaataaatgatgtatgtggtttataatgtagacca 24934630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 26385749 - 26385704
Alignment:
Q  128 taagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||    
T  26385749 taagcaaaaatttacatttaagattcatttaattaatgatgtatgt 26385704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 27904859 - 27904936
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||| |||| |||| ||||  ||||||||| ||| ||||||||| || ||||||||||| ||||| |||||||||    
T  27904859 aaatcaatacaagtaattatttgtttaaaaatcttgcataaatcttagacaactattattttaagacatatggagtat 27904936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 557
Target Start/End: Original strand, 5524473 - 5524509
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgc 557  Q
    |||||||||||||||||||||||||||| ||||||||    
T  5524473 aaatcaacacaattaatcattttcttaataatcgtgc 5524509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 31813422 - 31813470
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||||||| |||||| ||||||||  |||||||||||||||||||||||    
T  31813422 tattataaacaaaaatttacattttagattcattcaattaatgatgtat 31813470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 577
Target Start/End: Original strand, 48608955 - 48609011
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactatt 577  Q
    |||||||||||||||||||||| ||||| |||| ||| |||| || |||||||||||    
T  48608955 aaatcaacacaattaatcatttccttaataatcatgcataaacctcaaacgactatt 48609011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 3498331 - 3498374
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||    
T  3498331 gattcattcaattaatgatgtatgtggtttataatatggaccac 3498374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 18113383 - 18113304
Alignment:
Q  104 aactacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||| ||| | |||||| |||||||||||||||||||||  ||||||||   |||||||| ||||| || ||||||    
T  18113383 aactacaccctctagtcaataatataagcaaaaaattacattttagattcatttgtttaatgatatatgtggtctataat 18113304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 21886478 - 21886525
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgta 170  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||||||||    
T  21886478 tattataagcaaaaatttatattttagattcattcaattaatgatgta 21886525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 22738794 - 22738853
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||| ||||||||||||||||  |||| |||||||| |||| |||||||||||| ||||    
T  22738794 aaatctacacaattaatcatttctttaataatcgtgcataaaccttaaacgactaatatt 22738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 30138915 - 30138864
Alignment:
Q  125 ttataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagt 176  Q
    ||||||| ||||| ||||||||  ||||||||||||||||||||||| ||||    
T  30138915 ttataagtaaaaatttacattttagattcattcaattaatgatgtatatagt 30138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 41506101 - 41506043
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||| ||||||||||||||||| ||||| |||||||| |||| ||| |||||||||||||    
T  41506101 aaattaacacaattaatcatttccttaataatcgtgcataaacctt-aacgactattatt 41506043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 2850917 - 2850839
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    ||||||||| |||||||||||| ||||| |||| |||  ||| | ||||||||||| ||||  |||| |||||||||||    
T  2850917 aaatcaacataattaatcatttccttaataatcatgcacaaaccataaacgactataatttagagacggatggagtatt 2850839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 12171696 - 12171730
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||| ||||||||||||||||||||||||||    
T  12171696 gattcatttaattaatgatgtatgtagtttataat 12171730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 18534986 - 18534937
Alignment:
Q  133 aaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||||||| |||||||| |||||||||||||| || ||||||    
T  18534986 aaaaaattacatttatg-ttcattcatttaatgatgtatgtggtctataat 18534937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 27554642 - 27554576
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    ||||| |||| |||| || |||||||||||| |||| ||||  || |||||||||||||||||||||    
T  27554642 tacaccctccgatcactaatataagcaaaaatttacttttaaaatacattcaattaatgatgtatgt 27554576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 409 - 491
Target Start/End: Complemental strand, 30394846 - 30394764
Alignment:
Q  409 agtgaaattgatattcttgatgatggatataggtggaggaaatatggacagaaagtagttaaaggaaatccaaacccaaggta 491  Q
    ||||| |||||| | ||||||||||| ||| | ||| | || ||||||||||| || || ||||| |||||||||||||||||    
T  30394846 agtgacattgatgtacttgatgatggttatcgctggcgaaagtatggacagaaggttgtcaaagggaatccaaacccaaggta 30394764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 555
Target Start/End: Original strand, 49101759 - 49101793
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgt 555  Q
    |||| ||||||||||||||||||||||||||||||    
T  49101759 aaataaacacaattaatcattttcttaaaaatcgt 49101793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 5689402 - 5689345
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||| |||||||||| ||||  | |||||||| |||||||||||||| |||||||||    
T  5689402 tataaacaaaaaattatattttaggttcattcatttaatgatgtatgtggtttataat 5689345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 9555389 - 9555332
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttat 180  Q
    ||||||||||||||  ||||||||  |||||||||| | |||||||||||| ||||||    
T  9555389 tattataagcaaaactttacattttagattcattcattaaatgatgtatgtggtttat 9555332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 9606850 - 9606907
Alignment:
Q  398 ttcaaactacaagtgaaattgatattcttgatgatggatataggtggaggaaatatgg 455  Q
    |||||||||  ||| || ||||||| ||||||||||| ||||| ||||||||||||||    
T  9606850 ttcaaactaggagtcaagttgatatacttgatgatggttatagatggaggaaatatgg 9606907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 9834421 - 9834478
Alignment:
Q  398 ttcaaactacaagtgaaattgatattcttgatgatggatataggtggaggaaatatgg 455  Q
    |||||||||  ||| || ||||||| ||||||||||| ||||| ||||||||||||||    
T  9834421 ttcaaactaggagtcaagttgatatacttgatgatggttatagatggaggaaatatgg 9834478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 34275205 - 34275262
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  34275205 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 34275262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 41872177 - 41872120
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||  |||||||  |||||||||| |||||||||||||| || ||||||    
T  41872177 tataagcaaaaatctacattttagattcattcatttaatgatgtatgtggtctataat 41872120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 43067063 - 43067104
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||    
T  43067063 ttcattcaattaatgatgtatgtggttcataatatagaccac 43067104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 43813136 - 43813205
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||| |||  |||  |||||||||||| ||||| ||||||||| |||||| | ||||||    
T  43813136 tattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccac 43813205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 46221117 - 46221158
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  46221117 ttcattcaattaatgatgtatgtggtttataatatggaccac 46221158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 46477172 - 46477213
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  46477172 ttcattcaattaatgatgtatgtggtttataatatggaccac 46477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 46578366 - 46578325
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||||| ||||| || |||||    
T  46578366 ttcattcaattaatgatgtatgtagttcataatataaaccac 46578325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 491
Target Start/End: Complemental strand, 26966262 - 26966152
Alignment:
Q  381 ggaaccaagagttgtggttcaaactacaagtgaaattgatattcttgatgatggatataggtggaggaaatatggacagaaagtagttaaaggaaatcca 480  Q
    |||||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||| || |||||||||||||| ||||||||||| || |||||||||    
T  26966262 ggaacctagagttgttgttcaaacaacaagtgacattgatattctagatgatggatacagatggaggaaatatgggcagaaagtagtaaagggaaatcca 26966163  T
Q  481 aacccaaggta 491  Q
    || ||||||||    
T  26966162 aatccaaggta 26966152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 2057003 - 2057106
Alignment:
Q  388 agagttgtggttcaaactacaagtgaaattgatattcttgatgatggatataggtggaggaaatatggacagaaagtagttaaaggaaatccaaacccaa 487  Q
    |||||||| ||||| ||||| |||||| | ||||| || |||||||| ||| ||||| ||||||||||||||||||| || ||||||||||| |||||||    
T  2057003 agagttgttgttcagactaccagtgaagtagatatcctcgatgatggttatcggtggcggaaatatggacagaaagttgtcaaaggaaatcccaacccaa 2057102  T
Q  488 ggta 491  Q
    ||||    
T  2057103 ggta 2057106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 17652834 - 17652913
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattt 600  Q
    |||||||||||||||||||||| ||||| |||||||| |||| || |||||||||||||||  |||| ||||||||||||    
T  17652834 aaatcaacacaattaatcatttccttaataatcgtgcataaacctcaaacgactattatttagagacggatggagtattt 17652913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 521 - 599
Target Start/End: Original strand, 37497578 - 37497656
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    ||||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||  |||| |||||||||||    
T  37497578 aaatcaacacaataaatcatttccttaataatcgtgcataaatcttaaacgattattatttagagacggatggagtatt 37497656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 8679083 - 8679023
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||    
T  8679083 aaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgactataattt 8679023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 24569129 - 24569069
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| ||||    
T  24569129 aaatcaacacaattaatcattttcttaataatcgtgcataaatcttaagcgactataattt 24569069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 578
Target Start/End: Complemental strand, 29023995 - 29023938
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactatta 578  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||||||||||||    
T  29023995 aaatcaacacaattaatcatttttttaataatcgtgcataaaccttaaacgactatta 29023938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 10366671 - 10366611
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| ||||||||  ||| ||||||||||| ||||||    
T  10366671 aaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactgttattt 10366611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 37312036 - 37312095
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||| ||||| |||||||| |||| |||||||||||| ||||    
T  37312036 aaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactaatatt 37312095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 19823097 - 19823174
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| ||||||| ||||| ||||  ||||||| |||||||    
T  19823097 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacaactataatttagagacagagggagtat 19823174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 594
Target Start/End: Complemental strand, 33491112 - 33491039
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatgga 594  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| |||||||||||| |||| | |||| ||||||    
T  33491112 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatgga 33491039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 45710936 - 45711013
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||| |||||||||||||||||| || ||||| | || ||||||||||||||||||  |||| || |||||||    
T  45710936 aaatcaacataattaatcattttcttaacaaccgtgcatcaaccttaaacgactattatttagagaccgaaggagtat 45711013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 11905908 - 11905968
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||| ||||||||||||||||||||||| |||||||| ||||  |||||||| ||||||||    
T  11905908 aaattaacacaattaatcattttcttaataatcgtgcataaactttaaacgagtattattt 11905968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 12736600 - 12736540
Alignment:
Q  522 aatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    ||||||||||||||||||||| ||||||||||||||  |||  |||||| |||||||||||    
T  12736600 aatcaacacaattaatcatttccttaaaaatcgtgcacaaactttaaacaactattatttt 12736540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 12744912 - 12744960
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  12744912 tattataagcaaaaacttacattttagattcattcaattaatgatgtat 12744960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 572
Target Start/End: Original strand, 27471421 - 27471472
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||||||||    
T  27471421 aaatcaacataattaatcattttcttaataatcgtgcacaaatcttaaacga 27471472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 19609385 - 19609451
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagac 587  Q
    |||||||||||| ||||||||||||||||| || | |  ||||||||||||| ||||||||| ||||    
T  19609385 aaatcaacacaaataatcattttcttaaaattcatacacaaatcttaaacgattattattttgagac 19609451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 40462398 - 40462464
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagac 587  Q
    ||||||| |||||||||||||||||||||||||  ||| ||| ||||||| | ||||||||| ||||    
T  40462398 aaatcaaaacaattaatcattttcttaaaaatcacgctcaaaccttaaacaattattattttgagac 40462464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 1778728 - 1778805
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||| ||||| |||| |||  ||| |||||||||||| |||| | |||| || |||||||    
T  1778728 aaatcaacacaattaatcatttccttaataatcatgcacaaaccttaaacgactaatattgtgagacggagggagtat 1778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 9170123 - 9170192
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||  |||||||||  | ||||||||| || |||||||||  |||||||    
T  9170123 tattataagcaaaaaattacattttagattcattcgttaaatgatgtacgtggtttataataaagaccac 9170192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 14194641 - 14194702
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||||| |||||||  |||||||||||||  ||| ||||||||||| |||||||    
T  14194641 aaatcaacacaattgatcatttctttaaaaatcgtgcacaaaccttaaacgactgttatttt 14194702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 24596902 - 24596967
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtaga 188  Q
    ||||||||| ||||| ||||||||  |||||||||||| || |||||||||  |||||||||||||    
T  24596902 tattataagtaaaaatttacattttagattcattcaataaacgatgtatgtgatttataatgtaga 24596967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 26770750 - 26770791
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  26770750 ttcattcaattaatgatgtatgtggtttataatatagaccac 26770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 37695695 - 37695634
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgc-ttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||||||||   ||| ||||||||||||||||||    
T  37695695 aaatcaacacaattaatcatttccttaataatcgtgcacaaaaccttaaacgactattattt 37695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 38795430 - 38795491
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||| ||||||||||||||||| |||||| |||||||  |||  ||||||||||||||||||    
T  38795430 aaataaacacaattaatcatttccttaaatatcgtgcacaaacattaaacgactattatttt 38795491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 10872801 - 10872753
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||||||||    
T  10872801 tattataagcaaaaatttatattttagattcattcaattaatgatgtat 10872753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 11632167 - 11632225
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||||||||||||||||| |||| ||||||||  |||||||||| ||||| ||||    
T  11632167 aaatcaacacaattaatcatttt-ttaataatcgtgcacaaatcttaaatgactaatatt 11632225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 572
Target Start/End: Complemental strand, 43253892 - 43253841
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| |||||||||    
T  43253892 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacga 43253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 555
Target Start/End: Original strand, 19611994 - 19612028
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgt 555  Q
    ||||||||||||||||||| |||||||||||||||    
T  19611994 aaatcaacacaattaatcactttcttaaaaatcgt 19612028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 334794 - 334741
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagt 176  Q
    ||||||||| ||||  |||| |||| |||||||| |||||||||||||||||||    
T  334794 tattataagaaaaattttacctttaagattcattgaattaatgatgtatgtagt 334741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 8439272 - 8439329
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  8439272 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 8439329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 10841826 - 10841773
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagt 176  Q
    |||||||||||||||  ||||||| ||||| ||| ||| |||||||||||||||    
T  10841826 tattataagcaaaaatctacatttttgatttatttaataaatgatgtatgtagt 10841773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 16127849 - 16127808
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  16127849 ttcattcaattaatgatgtatgtggtttataatatggaccac 16127808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 25881262 - 25881205
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  25881262 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 25881205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 26104788 - 26104845
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||| ||||||||  | |||||||| |||||||||||| |||| ||||||    
T  26104788 tataagcaaaaatttacattttaggttcattcatttaatgatgtatatagtctataat 26104845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 32833719 - 32833760
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||||| ||||| | ||||||    
T  32833719 ttcattcaattaatgatgtatgtagttcataatatggaccac 32833760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 581
Target Start/End: Original strand, 34957592 - 34957649
Alignment:
Q  524 tcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||| ||||  ||| || | |||| ||||||||||||||||||    
T  34957592 tcaacacaattaatcatttccttagtaattgtccataaaccttaaacgactattattt 34957649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 50466819 - 50466872
Alignment:
Q  118 atcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||| ||||||||| ||||| ||| ||||  |||||||||||||||||||||||    
T  50466819 atcattattataagtaaaaatttatattttagattcattcaattaatgatgtat 50466872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 51256606 - 51256647
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  51256606 ttcattcaattaatgatgtatgttgtttataatatggaccac 51256647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 53560303 - 53560380
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||| |||||||||||| |||||  ||||||| | || ||||||| ||||||||||  |||| ||| ||||||    
T  53560303 aaatcaacataattaatcatttccttaatcatcgtgcatcaaccttaaacaactattatttagagacggattgagtat 53560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 29363392 - 29363472
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattta 601  Q
    |||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||  |||| || ||||||||||    
T  29363392 aaatcaacacaattaatcattttcttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtattta 29363472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 32440673 - 32440596
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||| || || || ||||| |||||||||||||||||||||||  |||| || |||||||    
T  32440673 aaatcaacacaattaatcatttcctaaataaccgtgcataaatcttaaacgactattatttagagacggagggagtat 32440596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 11655974 - 11655914
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| || ||||| |||| ||||||||||| ||||||    
T  11655974 aaatcaacacaattaatcattttcttaataaccgtgcataaaccttaaacgactcttattt 11655914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 11637162 - 11637229
Alignment:
Q  104 aactacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||||||||||||  ||| |||||||||||||| |||||||||   ||||||||||||||||||||||    
T  11637162 aactacactctccggtcactattataagcaaaacattacattttaaattcattcaattaatgatgtat 11637229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 529 - 602
Target Start/End: Complemental strand, 3291788 - 3291715
Alignment:
Q  529 acaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatttaa 602  Q
    |||||||||||||| ||||| ||||||||  ||| ||||||||||||||||||  |||| ||||||||| ||||    
T  3291788 acaattaatcatttccttaataatcgtgcaaaaaccttaaacgactattatttagagaccgatggagtaattaa 3291715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29418945 - 29418998
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagt 176  Q
    ||||||||||||||||||||||||   ||| |||||||||||||||||||||||    
T  29418945 tattataagcaaaaaattacattttacattaattcaattaatgatgtatgtagt 29418998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 6802017 - 6802077
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||| |||||||||||||||||| || | ||| | |||||||||||||||||||||    
T  6802017 aaatcaacataattaatcattttcttaataaccatgcatcaatcttaaacgactattattt 6802077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 589
Target Start/End: Original strand, 7920324 - 7920392
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacag 589  Q
    ||||||||| ||||||||||||  |||||||||||||  ||||||||||||  ||||||||| ||||||    
T  7920324 aaatcaacaaaattaatcatttctttaaaaatcgtgcacaaatcttaaacggatattattttgagacag 7920392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 21010263 - 21010323
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||| ||||||||||||||||||||||| ||| |||| |||| ||||||| ||||||||||    
T  21010263 aaattaacacaattaatcattttcttaataattgtgcataaaccttaaacaactattattt 21010323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 591
Target Start/End: Complemental strand, 1063631 - 1063561
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagat 591  Q
    ||||||||||||||||||||||||||||||||  | | ||||  ||||||||||| |||||| | ||||||    
T  1063631 aaatcaacacaattaatcattttcttaaaaattatacataaactttaaacgactactattttgatacagat 1063561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 10258459 - 10258385
Alignment:
Q  97 ttttttaaactacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||| ||||  |||| |||| ||||||||| ||||||| || |||  |||||||||||||||||||||||    
T  10258459 ttttttaaaatacatcctccgatcattattataagtaaaaaataactttttagattcattcaattaatgatgtat 10258385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 572
Target Start/End: Original strand, 1781890 - 1781939
Alignment:
Q  523 atcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    ||||||| |||||||||||||||||| |||||||| |||| |||||||||    
T  1781890 atcaacataattaatcattttcttaacaatcgtgcataaaccttaaacga 1781939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 31894238 - 31894161
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||||||||| |||| | |  ||||||||||||| || |||| | |||| || |||||||    
T  31894238 aaatcaacacaattaatcattttcttaataatcatacacaaatcttaaacgattaatattgtgagacggagggagtat 31894161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 1302759 - 1302827
Alignment:
Q  124 attataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||| ||||| ||||||||  | |||||||||| |||| ||||||| |||||| |||||||||||    
T  1302759 attataagtaaaaatttacattttagtttcattcaataaatgttgtatgtggtttatgatgtagaccac 1302827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 6834397 - 6834337
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||| |||||||||| |||||||| ||||  |||||  ||||||||||    
T  6834397 aaatcaacacaattaattattttcttaataatcgtgcataaactttaaagaactattattt 6834337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 8146075 - 8146031
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgta 170  Q
    |||||||||||||||||||||  |||||||||| |||||||||||    
T  8146075 tataagcaaaaaattacattttagattcattcatttaatgatgta 8146031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 23142753 - 23142801
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaa 569  Q
    |||||||||||||||||||||||||||| |||||||  |||| ||||||    
T  23142753 aaatcaacacaattaatcattttcttaataatcgtggataaaccttaaa 23142801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 26527319 - 26527259
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||||| | ||||||  |||||||||| | |||||||||||| |||||||||    
T  26527319 tattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtttataat 26527259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 27448184 - 27448124
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||| ||||  ||| ||||||||| ||||||||    
T  27448184 aaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacgattattattt 27448124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 31398217 - 31398297
Alignment:
Q  103 aaactacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||| ||||  ||| || ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  31398217 aaactacaccctccggtcactaatataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 31398297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 3720269 - 3720210
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||||||||||||||||  |||| ||||||||  ||| |||||||||||| ||||    
T  3720269 aaatcaacacaattaatcatttcattaataatcgtgcacaaaccttaaacgactaatatt 3720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 6560783 - 6560741
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatg 168  Q
    |||||||||||||||||||||  |||||||||| |||||||||    
T  6560783 tataagcaaaaaattacattttagattcattcatttaatgatg 6560741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 599
Target Start/End: Original strand, 13087616 - 13087694
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    ||||||||||||||||||| |||||||| ||||||   | || ||||||||||| ||||||  |||| || ||||||||    
T  13087616 aaatcaacacaattaatcactttcttaataatcgtttatgaaccttaaacgacttttatttagagacggagggagtatt 13087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 531 - 597
Target Start/End: Original strand, 15058213 - 15058279
Alignment:
Q  531 aattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||| ||||||||  ||| |||||||||||| ||||   ||||||| ||||||    
T  15058213 aattaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgcgagacagagggagta 15058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 6560671 - 6560728
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  6560671 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 6560728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 7418914 - 7418955
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||    
T  7418914 ttcattcaattaatgatgtatgtggttcataatatagaccac 7418955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 10731574 - 10731537
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtaga 188  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  10731574 ttcattcaattaatgatgtatgtggtttataatataga 10731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 30916960 - 30917013
Alignment:
Q  118 atcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||| ||||||||||||||||||||||||   ||| |||||||||||| |||||    
T  30916960 atcactattataagcaaaaaattacattttacatttattcaattaatggtgtat 30917013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 26093480 - 26093556
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||  ||| ||||||||||    
T  26093480 aaatcaacacaattaatcattttcttaataatcgtgcacaaatcttaaacgaccattatttagagagagatggagta 26093556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 521 - 590
Target Start/End: Complemental strand, 30754973 - 30754904
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacaga 590  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||  |||||||    
T  30754973 aaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgactataatttaaagacaga 30754904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 41080684 - 41080761
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    ||||||||||||||||||||||| |||||| || ||| |||| ||||| ||||||||||||| ||||| |||||||||    
T  41080684 aaatcaacacaattaatcatttttttaaaattcatgcataaaccttaatcgactattattttgagacatatggagtat 41080761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 577
Target Start/End: Complemental strand, 16395079 - 16395023
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactatt 577  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  16395079 aaatcaacacaattaatcattttcttaataatcgtgcataaaccttaaacgactatt 16395023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Complemental strand, 6160491 - 6160424
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagaca 588  Q
    ||||||||||||||||||||||||||||||||||| |  || || ||||||||||||||||| |||||    
T  6160491 aaatcaacacaattaatcattttcttaaaaatcgtacacaagtcgtaaacgactattattttgagaca 6160424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 38787427 - 38787487
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||||||||||    
T  38787427 aaatcaacacaatcaatcatttccttaataatcgtgcataaaccttaaacgactattattt 38787487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 49224018 - 49223958
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||  || ||||| | |||||||||||||||||||||    
T  49224018 aaatcaacacaattaatcattttcttagtaaccgtgcatcaatcttaaacgactattattt 49223958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 6267888 - 6267822
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagac 587  Q
    ||||||||||||||||||||||  |||||||| ||||  ||| ||||||||||||||||||| ||||    
T  6267888 aaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacgactattattttgagac 6267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 40144879 - 40144819
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| ||  |||| | |||||| ||||||||||||||    
T  40144879 aaatcaacacaattaatcattttcttaataactgtgcatcaatcttgaacgactattattt 40144819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 46412833 - 46412769
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||| |||| |||| ||||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  46412833 tacaccctccgatcactattataagtaaaaatttacattttggattcattcaattaatgatgtat 46412769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 12039168 - 12039227
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| |||||||||||| ||||    
T  12039168 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatatt 12039227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 600
Target Start/End: Complemental strand, 32970599 - 32970520
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattt 600  Q
    |||||||||||||||||||||||||||| ||||||     || ||||||||| ||||||||| ||| ||| |||||||||    
T  32970599 aaatcaacacaattaatcattttcttaataatcgtatacgaaccttaaacgaatattattttgagatagagggagtattt 32970520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 35367677 - 35367622
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaa-tcttaaacgacta 575  Q
    |||||||||||||||||||||||||||| |||||||| ||||  ||||||||||||    
T  35367677 aaatcaacacaattaatcattttcttaataatcgtgcataaacgcttaaacgacta 35367622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 34954035 - 34953977
Alignment:
Q  113 ctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||| |||| ||||||||||||||| ||| ||||  |||||||||||||||||||||||    
T  34954035 ctccgatcactattataagcaaaaatttatattttagattcattcaattaatgatgtat 34953977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 43500816 - 43500762
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    ||||||||||||||||| |||| ||||| |||||||| |||| ||||||||||||    
T  43500816 aaatcaacacaattaataatttccttaataatcgtgcataaaccttaaacgacta 43500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 31909850 - 31909809
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  31909850 ttcattcaattaatgatgtatgtggtttataatatagaccac 31909809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 31978684 - 31978607
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||| ||||||||| ||||||||  |||  |||||||||||| ||||  |||| || |||||||    
T  31978684 aaatcaacacaattaatctttttcttaataatcgtgcacaaactttaaacgactataatttagagacggagggagtat 31978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 5179431 - 5179371
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||||||| |||| |||||||   ||| ||||||||||| ||||||    
T  5179431 aaatcaacacaattaatcattttgttaagaatcgtgtacaaaccttaaacgactgttattt 5179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 24991685 - 24991609
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||| ||||| |||||||   ||| |||||||||||| |||| | |||| || ||||||    
T  24991685 aaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacggagggagta 24991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 28749077 - 28749125
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaa 569  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||    
T  28749077 aaatcaacacaattaatcatttccttaataatcgtgcacaaatcttaaa 28749125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 573
Target Start/End: Original strand, 35538729 - 35538781
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgac 573  Q
    ||||||||||||||||| |||||||||||||| ||   |||||||||||||||    
T  35538729 aaatcaacacaattaataattttcttaaaaattgtaaataaatcttaaacgac 35538781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 37506213 - 37506273
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| || ||||| | || ||||||||| ||||||||    
T  37506213 aaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacgattattattt 37506273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 39864197 - 39864257
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||||||||  |||  |||||||||||| ||||    
T  39864197 aaatcaacacaattaatcatttccttaataatcgtgcacaaactttaaacgactataattt 39864257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 42410080 - 42410140
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||||||| |||| || ||||| | || ||||||| ||||||||||    
T  42410080 aaatcaacacaattaatcatttttttaataaccgtgcatcaaccttaaacaactattattt 42410140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 42761464 - 42761512
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||||||||  ||||||||  |||||||||||||||||||||||    
T  42761464 tattataagcaaaactttacattttagattcattcaattaatgatgtat 42761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 45331427 - 45331487
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||| ||||||| |||||||||| || ||||| | || ||||||||||||||||||    
T  45331427 aaatcaacataattaattattttcttaataaccgtgcgtcaaccttaaacgactattattt 45331487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 49586234 - 49586158
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||| || ||| || ||||||||||||| ||||||   | |||||||| |||||||||||||| |||||||||    
T  49586234 tacactcttcagtcattaatataagcaaaaaactacattctaggttcattcatttaatgatgtatgtggtttataat 49586158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 4972697 - 4972646
Alignment:
Q  113 ctccaatcaatattataagcaaaaaattacatttatgattcattcaattaat 164  Q
    |||||| || ||||||||||||||||||||||||  |||| |||||||||||    
T  4972697 ctccaaacattattataagcaaaaaattacatttgggatttattcaattaat 4972646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 572
Target Start/End: Complemental strand, 21910038 - 21909987
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||||||    
T  21910038 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacga 21909987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 23169025 - 23168966
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||||||||||| |||||||||| ||||||||  |||  ||||||||||| ||||    
T  23169025 aaatcaacacaattaattattttcttaataatcgtgcacaaactttaaacgactaatatt 23168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 3013621 - 3013671
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    ||||||||||||||||||| ||||  |||| |||||||||||| |||||||    
T  3013621 tattataagcaaaaaattatattttagatttattcaattaatgttgtatgt 3013671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 587
Target Start/End: Complemental strand, 7439935 - 7439881
Alignment:
Q  533 ttaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagac 587  Q
    |||||||||||  ||||||||||||  ||| ||||||||||||||||||| ||||    
T  7439935 ttaatcatttttctaaaaatcgtgcaaaaaccttaaacgactattattttgagac 7439881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 13579653 - 13579575
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    ||||||||||||||||||||||  |||| |||| ||| |||| |||||| || ||||| ||  |||| |||||||||||    
T  13579653 aaatcaacacaattaatcatttctttaataatcatgcataaaccttaaatgattattacttagagacggatggagtatt 13579575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 19175733 - 19175667
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    ||||| ||||| ||| |||||||||||||||  ||| |||  |||||||||||| ||||||||||||    
T  19175733 tacaccctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtatgt 19175667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 5852727 - 5852768
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  5852727 ttcattcaattaatgatgtatgtggtttataatatggaccac 5852768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 6283661 - 6283604
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  6283661 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 6283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Complemental strand, 15278666 - 15278629
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtaga 188  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  15278666 ttcattcaattaatgatgtatgtggtttataatataga 15278629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 15311573 - 15311532
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||| |||||||||||||||||||||||| | ||||||    
T  15311573 ttcattcatttaatgatgtatgtagtttataatatggaccac 15311532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 15699208 - 15699269
Alignment:
Q  521 aaatcaacacaattaatca-ttttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||||| ||||||||| ||  |||| | || ||||||||||||||||||    
T  15699208 aaatcaacacaattaatcatttttcttaataactgtgcatcaaccttaaacgactattattt 15699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 23394819 - 23394750
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||  | ||||  |||||||| |||  |||||||||||  |||||||||||||||||    
T  23394819 tattataagcaaaaaaaaatattttagattcatttaatagatgatgtatgtgatttataatgtagaccac 23394750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 24478766 - 24478725
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||| |||||||||||||||| ||||||||| ||||||||    
T  24478766 ttcatttaattaatgatgtatgtggtttataatatagaccac 24478725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 33738264 - 33738223
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  33738264 ttcattcaattaatgatgtatgtggtttataatatggaccac 33738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 36040160 - 36040217
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  36040160 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 36040217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 38824330 - 38824371
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||    
T  38824330 ttcattcaattaatgatgtatgtggttcataatatagaccac 38824371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 38847403 - 38847362
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||| |||||||||||||| ||||||||| ||||||||    
T  38847403 ttcattcatttaatgatgtatgtggtttataatatagaccac 38847362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 44674014 - 44673946
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||| |||  |||  |||||||||||| |||||| |||||||||||| || ||||||||    
T  44674014 tattataagcaaaaatttaatttttagattcattcaat-aatgatatatgtagtttattatatagaccac 44673946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 46518046 - 46518005
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  46518046 ttcattcaattaatgatgtatgtggtttataatatggaccac 46518005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 8e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 39482701 - 39482778
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||| |||| | |||| || |||||||    
T  39482701 aaatcaacacaattaatcattttcttaataatcgtgcacaaatcttaaacgactaatattgtgagacggagggagtat 39482778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 36967447 - 36967507
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||    
T  36967447 aaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattattt 36967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 521 - 599
Target Start/End: Complemental strand, 40996395 - 40996317
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatt 599  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||| ||||||||  |||| |||||||||||    
T  40996395 aaatcaacacaattaatcatttccttaacaattgtgcataaaccttaaacgattattatttagagacggatggagtatt 40996317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 51198 - 51258
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| ||||||||  ||| ||||||| ||||||||||    
T  51198 aaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacaactattattt 51258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 45425696 - 45425620
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||||||||| |||| ||| |||| |||||||||||| |||| | |||| || ||||||    
T  45425696 aaatcaacacaattaatcattttcttaataatcatgcataaaacttaaacgactaatattatgagacggaaggagta 45425620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 39405848 - 39405927
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattt 600  Q
    |||| ||||||||||||||||| ||||| ||||||||  ||| |||||||||||| |||| | |||| ||||||||||||    
T  39405848 aaattaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtattt 39405927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 13335302 - 13335383
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatttaa 602  Q
    |||||||||||||||| ||||| ||||| |||||||| |||| ||||||||| ||||||||  |||   |||||||||||||    
T  13335302 aaatcaacacaattaaccatttccttaataatcgtgcataaaccttaaacgattattatttagagaagaatggagtatttaa 13335383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 10117099 - 10117051
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  10117099 tattataagcaaaaatttacattttagattcattcaattaatgatgtat 10117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 581
Target Start/End: Complemental strand, 17719280 - 17719228
Alignment:
Q  529 acaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||||||||||||    
T  17719280 acaattaatcatttttttaataatcgtgcacaaatcttaaacgactattattt 17719228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 32678804 - 32678864
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| |||||||  ||||  |||||||||||||||||    
T  32678804 aaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattattt 32678864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 33385316 - 33385256
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgat 167  Q
    |||| ||||| |||||||||||||||||||  ||||||||  |||||||||||||||||||    
T  33385316 tacattctccgatcaatattataagcaaaaccttacattttagattcattcaattaatgat 33385256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 6611783 - 6611842
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||| ||||||||||||| |||| |||||||  ||||||||||||||||| ||||    
T  6611783 aaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatatt 6611842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 26626139 - 26626088
Alignment:
Q  524 tcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    ||||||||||||||||||| ||||| |||||||| |||| ||||||||||||    
T  26626139 tcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgacta 26626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 1875622 - 1875568
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| ||||||||||||    
T  1875622 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgacta 1875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 4428381 - 4428321
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||| |||||||||||||||||||  | | |||| |||||||||||||||||||    
T  4428381 aaatcaacacaaataatcattttcttaaaaat-atacataaaccttaaacgactattatttt 4428321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 10934614 - 10934683
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||||||||||| || ||||   ||||||| ||||||||||||||||||| | || ||||||||||    
T  10934614 tattataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttattgtagaccac 10934683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 13290046 - 13290087
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaat 164  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  13290046 tattataagcaaaaaattacattttggattcattcaattaat 13290087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 570
Target Start/End: Complemental strand, 29226261 - 29226212
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaac 570  Q
    |||||||||||||||||||||||||||| |||  ||| ||||||||||||    
T  29226261 aaatcaacacaattaatcattttcttaataattatgcataaatcttaaac 29226212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 10098021 - 10097961
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||| |||||||||||||||||||| || | ||| | || ||||||||||||||||||    
T  10098021 aaatcaatacaattaatcattttcttaataaccatgcatcaaccttaaacgactattattt 10097961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 31271107 - 31271167
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||| |||||||||||||| |||||| |  ||| ||||||||||||| ||||    
T  31271107 aaatcaacacaatcaatcattttcttaataatcgtacacaaaccttaaacgactataattt 31271167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 34326260 - 34326316
Alignment:
Q  127 ataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||  || |||||  ||||||||||||||||||||||||| |||||||||    
T  34326260 ataagcaaaactttgcattttagattcattcaattaatgatgtatgttgtttataat 34326316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 34393984 - 34393924
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| || ||||| | ||  |||||||||||||||||    
T  34393984 aaatcaacacaattaatcatttccttaataaccgtgcatcaactttaaacgactattattt 34393924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 34948717 - 34948641
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||| ||||| ||| |||   ||||||||||||| |||||||   |||| |||||||||    
T  34948717 aaatcaacacaattaatcatttccttaataattgtgtacaaatcttaaacgattattattcaaagacggatggagta 34948641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 42631816 - 42631859
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||    
T  42631816 gattcattcaattaatgatgtatgtggtttataatatggaccac 42631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 31810460 - 31810414
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatg 172  Q
    ||||||||||||| |||||||  |||||||||| |||||||||||||    
T  31810460 tataagcaaaaaactacattttagattcattcatttaatgatgtatg 31810414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 570
Target Start/End: Complemental strand, 9300143 - 9300094
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaac 570  Q
    ||||||||||||  |||||||||||||| |||||||| |||| |||||||    
T  9300143 aaatcaacacaaacaatcattttcttaataatcgtgcataaaccttaaac 9300094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 578
Target Start/End: Original strand, 12559679 - 12559735
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactatta 578  Q
    ||||||||||||||||||| |||||||||||||||   ||| | ||||||||||||||    
T  12559679 aaatcaacacaattaatca-tttcttaaaaatcgtatataatttttaaacgactatta 12559735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 21216131 - 21216078
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgact 574  Q
    |||||||||||||||||||||| ||||| |||| |||  ||| |||||||||||    
T  21216131 aaatcaacacaattaatcatttccttaataatcatgcacaaaccttaaacgact 21216078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 24053611 - 24053668
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||||||| ||||  | |||||||| |||||||||||||| || ||||||    
T  24053611 tataagcaaaaaattatattttaggttcattcatttaatgatgtatgtggtctataat 24053668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 31505164 - 31505107
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||| |||||||  | |||||||| |||||||||||||| || ||||||    
T  31505164 tataagcaaaaaactacattttaggttcattcatttaatgatgtatgtggtctataat 31505107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 34194661 - 34194620
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||||| ||||| | ||||||    
T  34194661 ttcattcaattaatgatgtatgtagttcataatatggaccac 34194620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 21488172 - 21488096
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||  ||| || |||||||||||||||||||||  |||||||||| |||||||||||||| |||||||||    
T  21488172 tacactctccggtcattaatataagcaaaaaattacattttagattcattcatttaatgatgtatgtggtttataat 21488096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 16463775 - 16463835
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| || ||||| |||| ||||||||||||||||||    
T  16463775 aaatcaacacaattaatcatttccttaataaccgtgcataaaccttaaacgactattattt 16463835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 582
Target Start/End: Complemental strand, 18853227 - 18853166
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    ||||||||||||||||| |||| |||||| |||||||  |||| ||||||||||||||||||    
T  18853227 aaatcaacacaattaattatttccttaaagatcgtgcacaaattttaaacgactattatttt 18853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 582
Target Start/End: Original strand, 19937763 - 19937824
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatttt 582  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| ||||||||||||| |||||    
T  19937763 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataatttt 19937824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 39785674 - 39785751
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||||| ||||| || ||||| | || ||||||||||||||||||  |||| || |||||||    
T  39785674 aaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacgactattatttagagacggagggagtat 39785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 15359114 - 15359054
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||| ||||||| || ||||| | || ||||||||||||||||||    
T  15359114 aaatcaacacaattaatcatcttcttaataaccgtgcatcaaccttaaacgactattattt 15359054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 17695416 - 17695492
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    ||||||| |||||||||||||| ||||| ||||||||  ||| ||||||||| ||| ||||| |||| |||||||||    
T  17695416 aaatcaatacaattaatcatttccttaataatcgtgcacaaaccttaaacgattataattttgagacggatggagta 17695492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 25637567 - 25637642
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||| ||| | |||||||| |||| ||||||| ||||||||||  |||| |||||||||    
T  25637567 aaatcaacacaattaatcatttcctt-ataatcgtgcataaaccttaaacaactattatttagagacggatggagta 25637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 36794370 - 36794430
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| || | ||| | |||||||||||||||||||||    
T  36794370 aaatcaacacaattaatcatttccttaataaccatgcatcaatcttaaacgactattattt 36794430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 39691576 - 39691636
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| ||||||||  ||| ||||||||| ||| ||||    
T  39691576 aaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgattataattt 39691636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 45235667 - 45235727
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||| |||||||| ||||| ||||||||  ||| ||||||||||||||||||    
T  45235667 aaatcaacacaatcaatcatttccttaataatcgtgcacaaaccttaaacgactattattt 45235727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 592
Target Start/End: Complemental strand, 10005151 - 10005081
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatg 592  Q
    |||||||||||||| |||||||||||| |||| ||||  ||| ||||||||||| ||||||| |||||||||    
T  10005151 aaatcaacacaattgatcattttcttataaat-gtgcacaaaccttaaacgactgttattttgagacagatg 10005081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 576
Target Start/End: Complemental strand, 31448720 - 31448665
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactat 576  Q
    |||||||||||||||||||||| ||||| ||||||||  ||| |||||||||||||    
T  31448720 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactat 31448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 602
Target Start/End: Original strand, 37322514 - 37322596
Alignment:
Q  521 aaatcaacacaattaatcattttc-ttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtatttaa 602  Q
    ||||||||||||| |||||||||| |||| |||||||| |||| ||||||||||||| ||||  |||| |||| |||| ||||    
T  37322514 aaatcaacacaatcaatcattttccttaataatcgtgcataaaccttaaacgactataatttagagacggatgaagtagttaa 37322596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 324835 - 324876
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  324835 ttcattcaattaatgatgtatgtagtttataatatggaccac 324876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 10041569 - 10041622
Alignment:
Q  139 ttacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||| ||||||||    
T  10041569 ttacattttagattcatttaattaatgatgtatgtggtttataatatagaccac 10041622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 24457114 - 24457171
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||||||||||||  | |||||||| |||||||||||||| || ||||||    
T  24457114 tataagcaaaaaattacattttaggttcattcatttaatgatgtatgtggtctataat 24457171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 570
Target Start/End: Complemental strand, 26607995 - 26607946
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaac 570  Q
    |||||||||||||||||||||||||||| ||||||||  ||| |||||||    
T  26607995 aaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaac 26607946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 27331888 - 27331835
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagt 176  Q
    |||||||||||||||   ||||||  ||||||||||||||||||||||||||||    
T  27331888 tattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagt 27331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 36354470 - 36354393
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||| || |||||| ||||| |||||| | |||| |||||| |||||||||||  |||| ||||||||||    
T  36354470 aaatcaacacaactagtcatttccttaataatcgtacataaaccttaaatgactattatttagagacggatggagtat 36354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 38181889 - 38181836
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagt 176  Q
    |||||||||||||||| |||||||   |||||||||||||||||||||| ||||    
T  38181889 tattataagcaaaaaactacattttacattcattcaattaatgatgtatatagt 38181836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 581
Target Start/End: Complemental strand, 5272212 - 5272160
Alignment:
Q  529 acaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||| |||| ||||| |||||||| |||| ||||||||||||||||||    
T  5272212 acaattaattatttccttaataatcgtgcgtaaaccttaaacgactattattt 5272160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 31102094 - 31102018
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||| |||| |||| ||||||||||||||  || |||||  |||||||||| | |||||||||||| |||||||||    
T  31102094 tacaccctccgatcattattataagcaaaagtttgcattttagattcattcattaaatgatgtatgtggtttataat 31102018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 34120466 - 34120406
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||||||||| |||| ||| ||||  |||||||  ||||||||    
T  34120466 aaatcaacacaattaatcattttcttaataatcatgcataaactttaaacggttattattt 34120406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 38465934 - 38465870
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    ||||| ||||| ||| |||| ||||||||||  |||||||  |||||||||||||||||||||||    
T  38465934 tacaccctccagtcactattgtaagcaaaaatctacattttagattcattcaattaatgatgtat 38465870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 39443799 - 39443875
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    ||||||||| |||||||||||||||||| ||| ||||  ||| |||||||||||| |||| | |||  |||||||||    
T  39443799 aaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatattataagatggatggagta 39443875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Complemental strand, 3323313 - 3323254
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||||  ||| ||||||||  ||| |||||||||||| ||||    
T  3323313 aaatcaacacaattaatcatttttataataatcgtgcacaaaccttaaacgactaatatt 3323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 4637110 - 4637067
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||    
T  4637110 gattcattcaattaatgatgtatgtggtttatattatagaccac 4637067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 9071242 - 9071285
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||||||||||||||||||||||| |||||| || |||||    
T  9071242 gattcattcaattaatgatgtatgtagtctataatataaaccac 9071285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 11153216 - 11153266
Alignment:
Q  125 ttataagcaaaaaatta--catttatgattcattcaattaatgatgtatgt 173  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||||||    
T  11153216 ttataagcaaaaaattatgcattttagattcattcaattaatgatgtatgt 11153266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 32473508 - 32473551
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  32473508 gattcattcaattaatgatgtatgtggttcataatatagaccac 32473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 40187381 - 40187322
Alignment:
Q  114 tccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    |||||||| |||||||| |||||| ||||||||  |||| ||||| ||||||||||||||    
T  40187381 tccaatcattattataaacaaaaatttacattttagattgattcagttaatgatgtatgt 40187322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 41824263 - 41824330
Alignment:
Q  114 tccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttata 181  Q
    |||||||| ||||||||||||||| | |  |||  |||||||||||| ||| ||||||||||||||||    
T  41824263 tccaatcactattataagcaaaaattcattttttagattcattcaataaattatgtatgtagtttata 41824330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 572
Target Start/End: Complemental strand, 16377682 - 16377632
Alignment:
Q  522 aatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacga 572  Q
    |||||||||||||||||||||  |||| ||||||||  |||||||||||||    
T  16377682 aatcaacacaattaatcatttctttaataatcgtgcacaaatcttaaacga 16377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 26003562 - 26003516
Alignment:
Q  125 ttataagcaaaaaattacatttatgattcattcaattaatgatgtat 171  Q
    |||||||||||||  |||||||  |||||||||||||||||||||||    
T  26003562 ttataagcaaaaatctacattttagattcattcaattaatgatgtat 26003516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 183
Target Start/End: Complemental strand, 27743719 - 27743685
Alignment:
Q  149 gattcattcaattaatgatgtatgtagtttataat 183  Q
    ||||||||||||||||||||||||| |||||||||    
T  27743719 gattcattcaattaatgatgtatgtggtttataat 27743685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 41220973 - 41220895
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaa-tcttaaacgactattattttcagacagatggagtat 598  Q
    |||||||||||||||||||| || ||||||||||| | |||| | |||| ||||||||||| | |||| |||| |||||    
T  41220973 aaatcaacacaattaatcatgtttttaaaaatcgtacataaatttttaagcgactattattgtgagacggatgaagtat 41220895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 5144307 - 5144348
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  5144307 ttcattcaattaatgatgtatgtggtttataatatggaccac 5144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 9431211 - 9431268
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||| ||||||||||||||  | |||||||| |||||||||||||| || ||||||    
T  9431211 tataagtaaaaaattacattttaggttcattcatttaatgatgtatgtggtctataat 9431268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 10099591 - 10099632
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||| |||||||||||||||| ||||||||| ||||||||    
T  10099591 ttcatttaattaatgatgtatgtggtttataatatagaccac 10099632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 14308772 - 14308723
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtag 175  Q
    |||||||||||||| | ||||  |||||||||||| ||||||||||||||    
T  14308772 tataagcaaaaaatcatattttagattcattcaataaatgatgtatgtag 14308723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 17378156 - 17378115
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||    
T  17378156 ttcattcaattaatgatgtatgtggttcatattgtagaccac 17378115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 30905225 - 30905184
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  30905225 ttcattcaattaatgatgtatgtggtttataatatggaccac 30905184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 601
Target Start/End: Original strand, 35313973 - 35314054
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaat-cttaaacgactattattttcagacagatggagtattta 601  Q
    |||||||||||||||||||||| ||||| |||||||| | |||  ||||||||||| |||| | |||| |||  ||||||||    
T  35313973 aaatcaacacaattaatcatttccttaataatcgtgcatcaatatttaaacgactaatattgtgagacggataaagtattta 35314054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 43732149 - 43732194
Alignment:
Q  123 tattataagcaaaaaattacatttatgattcattcaattaatgatg 168  Q
    |||||||||||||||  |||||||  ||||||||||||||||||||    
T  43732149 tattataagcaaaaatatacattttagattcattcaattaatgatg 43732194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 1790 - 1850
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||| |||||||||||||||||| || ||||  |||||||||||||||||||||||    
T  1790 aaatcaacataattaatcattttcttaataaccgtgtataaatcttaaacgactattattt 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 521 - 600
Target Start/End: Original strand, 50290 - 50369
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagtattt 600  Q
    |||| ||||||||||||||||| ||||| ||||||||  ||| |||||||||||| |||| | |||| ||||||||||||    
T  50290 aaattaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtattt 50369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 139422 - 139365
Alignment:
Q  126 tataagcaaaaaattacatttatgattcattcaattaatgatgtatgtagtttataat 183  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||| || ||||||    
T  139422 tataagcaaaaaattacattttagattcattcatttaatgatgtatgtggtctataat 139365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 597
Target Start/End: Original strand, 17121 - 17197
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||||||||||||||||||||| |||| |||  ||| |||||||||||| |||| | |||  |||||||||    
T  17121 aaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgactaatattgttagatggatggagta 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 1071 - 1130
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    ||||||||| ||||||||||||| |||| |||||||  ||||||||||||||||| ||||    
T  1071 aaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatatt 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 5501 - 5448
Alignment:
Q  139 ttacatttatgattcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||  |||||||| |||||||||||||||| ||||||||| ||||||||    
T  5501 ttacattttagattcatttaattaatgatgtatgtggtttataatatagaccac 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 6208 - 6269
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatg 168  Q
    ||||| ||||| ||| || |||||||||||||||||||||  |||||||||| |||||||||    
T  6208 tacaccctccagtcactaatataagcaaaaaattacattttcgattcattcatttaatgatg 6269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 6358 - 6292
Alignment:
Q  107 tacactctccaatcaatattataagcaaaaaattacatttatgattcattcaattaatgatgtatgt 173  Q
    ||||| ||||| ||| || |||||| ||||||||||||||  | |||||||| ||||||||||||||    
T  6358 tacaccctccagtcattaatataagtaaaaaattacattttaggttcattcatttaatgatgtatgt 6292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Complemental strand, 1846 - 1786
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    ||||||||||||||||| |||||||||| |||||||| ||||  |||||  ||||||||||    
T  1846 aaatcaacacaattaattattttcttaataatcgtgcataaactttaaagaactattattt 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 14134 - 14094
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagacca 191  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  14134 ttcattcaattaatgatctatgtagtttataatatagacca 14094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 597
Target Start/End: Complemental strand, 136066 - 135990
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattttcagacagatggagta 597  Q
    |||||||||  |||||||||||  |||| |||||||| ||||||||||||||||| |||| | |||| || ||||||    
T  136066 aaatcaacattattaatcatttatttaataatcgtgcataaatcttaaacgactaatattgtgagacggagggagta 135990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 39174 - 39234
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||||||||||||||| ||||| ||| ||||  ||| ||||||||| ||||||||    
T  39174 aaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacgattattattt 39234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 580
Target Start/End: Original strand, 16184 - 16243
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattatt 580  Q
    |||||||||||||||||||||| ||||| |||||||   ||||||||||| |||| ||||    
T  16184 aaatcaacacaattaatcatttccttaataatcgtgaacaaatcttaaactactaatatt 16243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 571
Target Start/End: Original strand, 105770 - 105820
Alignment:
Q  521 aaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacg 571  Q
    |||| ||||||||||||||||| ||||| |||| ||| |||||||||||||    
T  105770 aaataaacacaattaatcatttacttaataatcatgcataaatcttaaacg 105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 575
Target Start/End: Complemental strand, 6313 - 6260
Alignment:
Q  522 aatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgacta 575  Q
    |||||||||||||||||||||  |||||||||||||  |||  |||||||||||    
T  6313 aatcaacacaattaatcatttcgttaaaaatcgtgcacaaactttaaacgacta 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 581
Target Start/End: Complemental strand, 8011 - 7950
Alignment:
Q  520 caaatcaacacaattaatcattttcttaaaaatcgtgcttaaatcttaaacgactattattt 581  Q
    |||||||||| |||||||||||| ||||| || ||||| | || | ||||||||||||||||    
T  8011 caaatcaacaaaattaatcatttccttaataaccgtgcatcaaccgtaaacgactattattt 7950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 17535 - 17494
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    |||||||| |||||||||||||| ||||||||| ||||||||    
T  17535 ttcattcatttaatgatgtatgtggtttataatatagaccac 17494  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 280 - 239
Alignment:
Q  151 ttcattcaattaatgatgtatgtagtttataatgtagaccac 192  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  280 ttcattcaattaatgatgtatgtggtttataatatggaccac 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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