View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12054_high_8 (Length: 269)
Name: NF12054_high_8
Description: NF12054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12054_high_8 |
 | |
|
| [»] scaffold0499 (1 HSPs) |
| | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0356 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 45121356 - 45121099
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45121356 |
tgtgcctttttagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatggtgcatagatttcgtaataagtacaataaacaataccc |
45121257 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
45121256 |
ggaatattcagatgcttcctacgttcaaataagacatcatcggacagtaactgccatgtcgcatcccatactacatcagggctcttcattgtgctagtgg |
45121157 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45121156 |
ttaagagatgctcaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
45121099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 8997824 - 8997568
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8997824 |
tgtgcctttttagctagagaagaaaaaatgcaaaaattaaatcgtaaacaaa-caaataatggtgcatagatttcgtgataagtacaataaacaataccc |
8997726 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8997725 |
ggaatatttagacgcttcctacgttcaaataagataccatcggagagtaactgccatgtcgcatcacatactacatcagggctcgtcattgtgctagtgg |
8997626 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8997625 |
ttaagagatgcacaaacaaccaacgcaattgatcgcccgaacctaactcagcattttc |
8997568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 12779705 - 12779449
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
12779705 |
tgtgcctttttagacagagaa-aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattaccc |
12779607 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
12779606 |
agaatattcagacgcttcctacgttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtgg |
12779507 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
12779506 |
ttaagagatgcacaaacaaccaacacaattgatggcccgaacctaactcaccattttc |
12779449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 7038380 - 7038636
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
7038380 |
tgtgcctttttagacagagaa-aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttagtaataagtacaataaacattaccc |
7038478 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||| |||||||||| ||||||| ||| ||| |
|
|
| T |
7038479 |
aaaatattcagacgcttcctacgttcaaataagatatcattggacagtaactgccatgccgcatcccatactatatcagggctcgtcattgtcctaatgg |
7038578 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
7038579 |
ttaagagatgcacaaacaaccaacacaattgatggcccgaacctaactcaccattttc |
7038636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 12784542 - 12784307
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| || || |||| |||| | | ||||| |
|
|
| T |
12784542 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatagtgcatagattttgtaataagtacaataaacattatccagaatgttcaaacgtttccttt |
12784443 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12784442 |
gttcaaataagatatcatcggacagtaactgccatgccgcatcccatactatatcagggcccgtcattgtcctagtggttaagagatgcacaaacaacca |
12784343 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
12784342 |
acacaattgatggcccgaacctaactcaccattttc |
12784307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0499 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0499
Description:
Target: scaffold0499; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 11377 - 11634
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11377 |
tgtgcctttttagatagaaaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatggtgcatagatttcgtaataagtacaataaacaataccc |
11476 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
11477 |
ggaatattcagatgcttcctacgttcaaataagaaaacatcggacagtaactgacatgtcgcatcccatactacatcagggctcttcattgtgctagtgg |
11576 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11577 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
11634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 27882745 - 27883001
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27882745 |
tgtgcctttttagacagagaa-aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacct |
27882843 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
27882844 |
agaatattcagacgcttcctacgttcaaataagatatcatcggacagtaactgccatgccgcatcccatactatatcagggctcgtcattgtcctagtgg |
27882943 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27882944 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcaccattttc |
27883001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 37374562 - 37374818
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37374562 |
tgtgcctttttagacagagaa-aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattaccc |
37374660 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||| ||||| ||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
37374661 |
agaatattcagacgcttcctacgttcaaataagatatcatcgggcagtaactgccatgcagcatcccatactatatcagggctcgtcattgtcctagtgg |
37374760 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
37374761 |
ttaagagatgcacaaacaaccaacgcaattgattgcccgaacctaactcaccattttc |
37374818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 8427123 - 8426888
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
8427123 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgcttcctac |
8427024 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| |||||||||||| ||| |||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8427023 |
gttcaaataagatatcatcggacagtagctgtcatgccgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
8426924 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
8426923 |
acacaattgatggcccgaacctaactcaccattttc |
8426888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 21812881 - 21812748
Alignment:
| Q |
105 |
tattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaa |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21812881 |
tattcagacgcttcctacgttcaaataagatactatcggacaataactgccatgtcgcatcccatactacatcagggctcgtcattgtgctagtggttaa |
21812782 |
T |
|
| Q |
205 |
gagatgcacaaacaaccaacgcaattgatggccc |
238 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
21812781 |
gagatgcacaaacaaccaacacaattgatggccc |
21812748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 23 - 258
Target Start/End: Original strand, 34437 - 34672
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
34437 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagatgcttcctac |
34536 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
| |||||||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34537 |
gatcaaataagatatcatcggacagtaactgccatgccgcatctcatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
34636 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
34637 |
acgcaattgatggcccgaacgtaactcaccattttc |
34672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 41762261 - 41762028
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |
|
|
| T |
41762261 |
aaaaaatgcaaaaattagatcgtaaacaaaacgaa-aatggtgcatagatttcgtaataagtacaataaacattactcggaatattcagacgcttcctac |
41762163 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41762162 |
gttcaa-taagataccatcggccagtaactgccatgtcgcatcccatactatatcagggctcgtcattgtgctagtggttaagagatgcacaaacaacca |
41762064 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
41762063 |
acgtaattgattgcccgaacctaactcaccattttc |
41762028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 41918728 - 41918493
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
41918728 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgcttcctac |
41918629 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
41918628 |
gttcaaataagatatcatcggacagtagctgccatgtcgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
41918529 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
41918528 |
acacaattgatggcccgaacctaactcaccattttc |
41918493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 21396752 - 21396960
Alignment:
| Q |
50 |
aaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctacgttcaaataagataccatcggacagta |
149 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21396752 |
aaaacaaataatggtgcttagatttcgtaataagtacaataaacaatacctggaatattcaaacgcttcctacgttcaaataagataccatcggacagta |
21396851 |
T |
|
| Q |
150 |
actgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactc |
249 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21396852 |
actgccatgtcgcatcccatactacatcagggctcgtcattgtgctagtggttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactc |
21396951 |
T |
|
| Q |
250 |
agcattttc |
258 |
Q |
| |
|
||||||||| |
|
|
| T |
21396952 |
agcattttc |
21396960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 28664757 - 28664522
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
28664757 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgcttcctac |
28664658 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
28664657 |
gttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
28664558 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
28664557 |
acacaattgatggcccgaacctaactcaccattttc |
28664522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 37823591 - 37823356
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
37823591 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgcttcctac |
37823492 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
37823491 |
gttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
37823392 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
37823391 |
acacaattgatggcccgaacctaactcaccattttc |
37823356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 25217122 - 25216866
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25217122 |
tgtgcctttttagacagagaa-aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattaccc |
25217024 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
25217023 |
agaatattcagacgcttcctacgttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtgg |
25216924 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
25216923 |
ttaagagatgcacaaacaaccaacacaattgatggcccgaacctaactcaccattttc |
25216866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 7823506 - 7823746
Alignment:
| Q |
18 |
agaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgctt |
117 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
7823506 |
agaaaaaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgctt |
7823605 |
T |
|
| Q |
118 |
cctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaac |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||| |||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
7823606 |
cctacgttcaaataagatatcatcggacagtaactgccatgccacatcccatactatatcagggctcgtcattgttctaatggttaagagatgcacaaac |
7823705 |
T |
|
| Q |
218 |
aaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
7823706 |
aaccaacgcaattgatggcccgaacctaactcaccattttc |
7823746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 23 - 258
Target Start/End: Original strand, 30327146 - 30327381
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||| |
|
|
| T |
30327146 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattaccgagaagattcagacgcttcctac |
30327245 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||| ||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30327246 |
gttcaaataagatatcatcggacagtaactgccatgccgcatcccattctatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
30327345 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30327346 |
acgcaattgatggcccgaacctaactcgccattttc |
30327381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 33860279 - 33860046
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |
|
|
| T |
33860279 |
aaaaaatgcaaaaattagatcgtaaacaaaacgaa-aatggtgcatagatttcgtaataagtacaataaacattactcggaatattcagacgcttcctac |
33860181 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33860180 |
gttcaa-taagataccatcggccagtaactgccatgtcgcatcccatactatatcagggctcgtcattgtgctagtggttaagagatgcacaaacaacca |
33860082 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
33860081 |
acgtaattgattgcccgaacctaactcaccattttc |
33860046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 25207593 - 25207358
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| || || ||||||||||| ||||| ||| |
|
|
| T |
25207593 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcgtagatttcgtaataagtacaataaacattatccagaatattcagacgcttcttac |
25207494 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| ||||||||||||| || |||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25207493 |
gttcaaataagatatcatcggacagtaagtgtcatgccgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
25207394 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
25207393 |
acacaattgatggcccgaacctaactcaccattttc |
25207358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 35752274 - 35752512
Alignment:
| Q |
18 |
agaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgctt |
117 |
Q |
| |
|
|||| ||||||||||||||| ||||| || ||||||||| || || ||||||||||| ||||||| ||||||| | ||||||||||||| |||||| | |
|
|
| T |
35752274 |
agaaaaaaaaatgcaaaaatcagatcttacccaaaacaaa--atggtacatagatttcgaaataagtgcaataaatattacccggaatatttagatgcct |
35752371 |
T |
|
| Q |
118 |
cctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaac |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35752372 |
cctacgttcaaataagataccatcggacagcaactgccatgtcgcatcccatacaatattagggctcatcattgtgctagtggttaagagatgcacaaac |
35752471 |
T |
|
| Q |
218 |
aaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||| ||||| || |||||||| |||||| ||||||| |
|
|
| T |
35752472 |
aaccaacgtaattgttgacccgaaccaaactcaccattttc |
35752512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 35857569 - 35857825
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35857569 |
tgtgcctttttagacagagaa-aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattaccc |
35857667 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||| |
|
|
| T |
35857668 |
agaatattcagacgcttcctacgttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtgg |
35857767 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
35857768 |
ttaagagatgcacaaacaaccaacacaattgatggcccgaacctaactcaccattttc |
35857825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 49785413 - 49785178
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
49785413 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgcttcctac |
49785314 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
49785313 |
gttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
49785214 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
49785213 |
acacaattgatggcccgaacctaactcaccattttc |
49785178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 23 - 258
Target Start/End: Original strand, 31922789 - 31923022
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| |
|
|
| T |
31922789 |
aaaaaatgcaaaaattagatcgtaaacaaaacgaa-aatggtgcatagatttcgtaataagtacaataaacattactcggaatattcagacgcttcctac |
31922887 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31922888 |
gttcaa-taagataccatcggccagtaactgccatgtcgcatcccatactatatcagggctcgtcattgtgctagtggttaagagatgcacaaacaacca |
31922986 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
31922987 |
acgtaattgattgcccgaacctaactcaccattttc |
31923022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 13345617 - 13345693
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacc |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13345617 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacc |
13345693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 23 - 258
Target Start/End: Complemental strand, 47521 - 47286
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
47521 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattacccagaatattcagacgcttcctac |
47422 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||| |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
47421 |
gttcaaataagatatcatcggacagtagctgccatgccgcatcccatactatatcagggctcgtcattgtcctagtggttaagagatgcacaaacaacca |
47322 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttc |
258 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
47321 |
acacaattgatggcccgaacctaactcaccattttc |
47286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 6309556 - 6309307
Alignment:
| Q |
1 |
tgtgcctttatagctagagaagaaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaataccc |
100 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6309556 |
tgtgcctttttagacagagaaaaaaaaatgcaaaaattagatcgtaaacaaaacaaaaaatggtgcatagatttcgtaataagtacaataaacattaccc |
6309457 |
T |
|
| Q |
101 |
ggaatattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtgg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||| |||| ||||||| ||||||| |
|
|
| T |
6309456 |
agaatattcagacgcttcctacgttcaaataagatatcatcggacagtaactgccatgccgcatcccatactatatcaaggcttgtcattgtcctagtgg |
6309357 |
T |
|
| Q |
201 |
ttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactca |
250 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6309356 |
ttaagagatgcacaaacaaccaacacaattgatggcccgaacctaactca |
6309307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 2342193 - 2342246
Alignment:
| Q |
197 |
gtggttaagagatgcacaaacaaccaacgcaattgatggcccgaacctaactca |
250 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
2342193 |
gtggttaagagatgcacaaacaacaaacgcaattgatggcccgaacataactca |
2342246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0356 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0356
Description:
Target: scaffold0356; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 23 - 262
Target Start/End: Complemental strand, 14193 - 13956
Alignment:
| Q |
23 |
aaaaaatgcaaaaattagatcgtaaacaaaacaaataatagtgcatagatttcgtaataagtacaataaacaatacccggaatattcagatgcttcctac |
122 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
14193 |
aaaaaatgcaaaaattagattgtaaacaaaacgaa-aatggtgcatagatttcgtaataagtacaataaacattacccggaatattcagacacttcctac |
14095 |
T |
|
| Q |
123 |
gttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaagagatgcacaaacaacca |
222 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14094 |
gttcaa-taagataccatcggacagtaactgccatgtcgcatcccatactatatcagggctcgtcattgtgctagtggttaagagatgcacaaacaacca |
13996 |
T |
|
| Q |
223 |
acgcaattgatggcccgaacctaactcagcattttctgtg |
262 |
Q |
| |
|
||| ||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
13995 |
acgtaattgattgcccaaacctaactcacaattttctgtg |
13956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 16490029 - 16490162
Alignment:
| Q |
105 |
tattcagatgcttcctacgttcaaataagataccatcggacagtaactgccatgtcgcatcacatactacatcagggctcttcattgtgctagtggttaa |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16490029 |
tattcagacgcttcctacgttcaaataagatactatcggacaataactgccatgtcgcatcccatactacatcagggctcgtcattgtgctagtggttaa |
16490128 |
T |
|
| Q |
205 |
gagatgcacaaacaaccaacgcaattgatggccc |
238 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
16490129 |
gagatgcacaaacaaccaacacaattgatggccc |
16490162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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