View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12055_high_32 (Length: 360)

Name: NF12055_high_32
Description: NF12055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12055_high_32
NF12055_high_32
[»] chr1 (32 HSPs)
chr1 (14-360)||(9385660-9386014)
chr1 (95-220)||(28455875-28456002)
chr1 (95-220)||(32007075-32007202)
chr1 (95-220)||(45813011-45813138)
chr1 (97-220)||(778578-778702)
chr1 (95-220)||(5055788-5055915)
chr1 (95-220)||(29994383-29994510)
chr1 (95-220)||(41808203-41808330)
chr1 (95-220)||(20749-20876)
chr1 (95-220)||(48660023-48660150)
chr1 (127-220)||(7059501-7059595)
chr1 (95-220)||(5943682-5943809)
chr1 (95-220)||(41761411-41761538)
chr1 (95-219)||(35945798-35945924)
chr1 (150-220)||(41039303-41039373)
chr1 (101-220)||(39276357-39276478)
chr1 (95-217)||(2088908-2089032)
chr1 (95-220)||(49783708-49783835)
chr1 (95-216)||(50106200-50106323)
chr1 (150-220)||(4066019-4066089)
chr1 (167-217)||(13183179-13183229)
chr1 (97-185)||(29587255-29587345)
chr1 (167-220)||(13109845-13109898)
chr1 (140-220)||(26032848-26032929)
chr1 (95-220)||(192416-192543)
chr1 (274-360)||(9232619-9232705)
chr1 (150-220)||(35110099-35110169)
chr1 (167-220)||(13097379-13097432)
chr1 (95-220)||(46447373-46447504)
chr1 (152-216)||(39228492-39228554)
chr1 (95-217)||(7275682-7275806)
chr1 (167-219)||(26264537-26264589)
[»] chr7 (34 HSPs)
chr7 (95-220)||(47557782-47557909)
chr7 (95-220)||(25112247-25112374)
chr7 (95-220)||(25546275-25546402)
chr7 (95-220)||(2146637-2146764)
chr7 (95-220)||(4106739-4106866)
chr7 (95-220)||(23358186-23358313)
chr7 (95-220)||(31770532-31770659)
chr7 (95-220)||(40058239-40058366)
chr7 (98-219)||(43753754-43753878)
chr7 (95-217)||(44083941-44084065)
chr7 (95-220)||(27915580-27915708)
chr7 (107-220)||(4107322-4107437)
chr7 (127-220)||(48146787-48146881)
chr7 (100-210)||(27229487-27229600)
chr7 (93-220)||(47250251-47250380)
chr7 (95-220)||(32606330-32606457)
chr7 (95-196)||(47960979-47961082)
chr7 (150-220)||(38781208-38781278)
chr7 (150-220)||(47570718-47570788)
chr7 (97-220)||(8439081-8439206)
chr7 (155-220)||(11355886-11355951)
chr7 (101-220)||(29484755-29484876)
chr7 (95-220)||(7162790-7162915)
chr7 (95-220)||(25872764-25872891)
chr7 (95-216)||(38033730-38033853)
chr7 (150-220)||(42081619-42081686)
chr7 (95-207)||(25049971-25050085)
chr7 (140-220)||(48444152-48444233)
chr7 (163-211)||(34763513-34763561)
chr7 (95-220)||(5772819-5772946)
chr7 (97-205)||(13887174-13887282)
chr7 (110-220)||(41183831-41183943)
chr7 (150-220)||(5587338-5587408)
chr7 (150-220)||(5592299-5592369)
[»] scaffold0032 (1 HSPs)
scaffold0032 (95-220)||(56482-56609)
[»] chr2 (28 HSPs)
chr2 (98-220)||(11816550-11816675)
chr2 (95-220)||(10639606-10639733)
chr2 (95-220)||(11459716-11459843)
chr2 (95-220)||(33083554-33083681)
chr2 (95-220)||(23839860-23839987)
chr2 (95-220)||(26605625-26605752)
chr2 (95-220)||(39535534-39535661)
chr2 (95-217)||(11708679-11708803)
chr2 (95-220)||(19537308-19537435)
chr2 (112-220)||(37197610-37197720)
chr2 (95-220)||(19048755-19048882)
chr2 (141-220)||(33001751-33001830)
chr2 (95-220)||(34460370-34460497)
chr2 (95-220)||(45125165-45125292)
chr2 (95-220)||(27137918-27138044)
chr2 (95-220)||(39831444-39831570)
chr2 (97-217)||(16654366-16654488)
chr2 (140-220)||(4851367-4851448)
chr2 (95-220)||(7275886-7276014)
chr2 (94-220)||(34239820-34239948)
chr2 (150-220)||(29659218-29659288)
chr2 (167-220)||(42578243-42578296)
chr2 (95-220)||(19816221-19816348)
chr2 (97-218)||(20497592-20497715)
chr2 (140-217)||(4800923-4801001)
chr2 (163-220)||(44181887-44181944)
chr2 (95-220)||(34234531-34234656)
chr2 (95-189)||(45201903-45201999)
[»] scaffold1348 (1 HSPs)
scaffold1348 (95-220)||(862-989)
[»] chr8 (33 HSPs)
chr8 (95-220)||(70523-70650)
chr8 (95-220)||(6602518-6602645)
chr8 (95-220)||(6677971-6678098)
chr8 (95-220)||(32333115-32333242)
chr8 (95-220)||(45264640-45264766)
chr8 (95-220)||(1078648-1078775)
chr8 (95-220)||(28817257-28817384)
chr8 (95-220)||(31969720-31969847)
chr8 (95-220)||(35779497-35779624)
chr8 (95-220)||(42192639-42192766)
chr8 (95-220)||(10963242-10963367)
chr8 (95-220)||(1340-1467)
chr8 (95-220)||(4530982-4531109)
chr8 (95-220)||(7792662-7792789)
chr8 (95-219)||(40911222-40911347)
chr8 (112-220)||(42885192-42885302)
chr8 (95-217)||(7813323-7813447)
chr8 (95-220)||(3822397-3822524)
chr8 (140-210)||(5385385-5385456)
chr8 (98-220)||(39303313-39303438)
chr8 (95-220)||(12534720-12534845)
chr8 (99-219)||(41849233-41849354)
chr8 (164-217)||(31532128-31532181)
chr8 (133-219)||(18752381-18752468)
chr8 (95-220)||(39435283-39435410)
chr8 (151-220)||(13891149-13891218)
chr8 (132-220)||(2907054-2907142)
chr8 (133-219)||(7403696-7403782)
chr8 (170-220)||(42364702-42364752)
chr8 (95-190)||(18386709-18386806)
chr8 (163-220)||(29425422-29425479)
chr8 (155-220)||(31695269-31695334)
chr8 (152-220)||(9775042-9775110)
[»] chr6 (17 HSPs)
chr6 (95-220)||(33621495-33621622)
chr6 (95-220)||(33704217-33704344)
chr6 (95-220)||(21000693-21000820)
chr6 (95-220)||(28322933-28323060)
chr6 (119-220)||(4464152-4464255)
chr6 (95-220)||(21037292-21037418)
chr6 (151-220)||(361070-361139)
chr6 (127-220)||(19145505-19145598)
chr6 (155-220)||(29009650-29009715)
chr6 (163-220)||(35218640-35218697)
chr6 (95-220)||(2959150-2959277)
chr6 (133-190)||(11572048-11572106)
chr6 (169-210)||(10999418-10999459)
chr6 (127-220)||(16518457-16518549)
chr6 (166-220)||(28592128-28592182)
chr6 (155-220)||(32289408-32289473)
chr6 (141-220)||(24619079-24619159)
[»] chr5 (19 HSPs)
chr5 (95-220)||(13203958-13204085)
chr5 (95-210)||(27721432-27721549)
chr5 (95-220)||(35317697-35317824)
chr5 (95-220)||(21018224-21018351)
chr5 (95-220)||(29265876-29266003)
chr5 (127-220)||(31909385-31909479)
chr5 (93-220)||(4824939-4825068)
chr5 (95-217)||(1191543-1191667)
chr5 (95-220)||(2970985-2971112)
chr5 (95-220)||(12257357-12257484)
chr5 (95-196)||(9576985-9577088)
chr5 (97-217)||(6020995-6021117)
chr5 (98-220)||(8734000-8734125)
chr5 (155-220)||(35545996-35546061)
chr5 (163-220)||(32143414-32143471)
chr5 (95-220)||(11124653-11124780)
chr5 (95-217)||(40177625-40177749)
chr5 (95-220)||(2786272-2786398)
chr5 (151-217)||(17984745-17984811)
[»] chr4 (39 HSPs)
chr4 (95-220)||(1173952-1174079)
chr4 (95-220)||(34739281-34739408)
chr4 (95-220)||(53457825-53457952)
chr4 (89-220)||(55400223-55400356)
chr4 (95-220)||(19849503-19849630)
chr4 (95-220)||(26424858-26424984)
chr4 (95-220)||(28798388-28798515)
chr4 (95-220)||(43139906-43140033)
chr4 (90-219)||(55214648-55214779)
chr4 (95-220)||(18257330-18257457)
chr4 (95-220)||(45874056-45874183)
chr4 (115-210)||(39807865-39807962)
chr4 (95-220)||(54768432-54768559)
chr4 (133-220)||(12735471-12735559)
chr4 (95-220)||(238458-238585)
chr4 (95-220)||(12867842-12867969)
chr4 (152-220)||(2075565-2075633)
chr4 (102-220)||(23417483-23417603)
chr4 (153-220)||(1966611-1966678)
chr4 (95-216)||(23710337-23710460)
chr4 (95-220)||(11277983-11278106)
chr4 (96-220)||(19225261-19225387)
chr4 (127-220)||(22608019-22608113)
chr4 (127-220)||(29581044-29581137)
chr4 (95-210)||(37134049-37134166)
chr4 (95-220)||(19673929-19674056)
chr4 (163-210)||(23532118-23532165)
chr4 (95-179)||(32441125-32441211)
chr4 (150-220)||(50033440-50033510)
chr4 (167-220)||(31015057-31015110)
chr4 (133-220)||(51287641-51287730)
chr4 (167-220)||(52171990-52172043)
chr4 (152-220)||(33770628-33770696)
chr4 (95-196)||(12767088-12767191)
chr4 (127-207)||(32778159-32778238)
chr4 (167-220)||(16555382-16555435)
chr4 (140-216)||(19814152-19814229)
chr4 (95-217)||(2864751-2864875)
chr4 (152-220)||(37620677-37620745)
[»] chr3 (29 HSPs)
chr3 (95-220)||(7824454-7824581)
chr3 (95-220)||(29689482-29689609)
chr3 (95-220)||(54158267-54158394)
chr3 (112-217)||(9349679-9349786)
chr3 (95-220)||(42392805-42392932)
chr3 (95-220)||(43247650-43247777)
chr3 (95-220)||(51665925-51666052)
chr3 (95-220)||(54151681-54151808)
chr3 (95-210)||(55018044-55018161)
chr3 (95-220)||(4601426-4601553)
chr3 (127-220)||(475281-475374)
chr3 (112-220)||(36228994-36229104)
chr3 (112-220)||(3112995-3113105)
chr3 (127-219)||(38257304-38257397)
chr3 (95-219)||(40756728-40756855)
chr3 (95-220)||(43775224-43775351)
chr3 (95-220)||(50729525-50729652)
chr3 (95-220)||(50783197-50783324)
chr3 (95-195)||(35461504-35461606)
chr3 (95-220)||(28844505-28844633)
chr3 (95-220)||(32001424-32001551)
chr3 (95-220)||(33334609-33334736)
chr3 (95-220)||(52500839-52500966)
chr3 (95-220)||(28458664-28458790)
chr3 (150-217)||(7958627-7958694)
chr3 (95-220)||(47635005-47635132)
chr3 (170-220)||(27230744-27230794)
chr3 (165-210)||(448885-448930)
chr3 (95-218)||(1778852-1778977)
[»] scaffold0119 (2 HSPs)
scaffold0119 (95-220)||(13951-14078)
scaffold0119 (95-220)||(19631-19758)
[»] scaffold0044 (1 HSPs)
scaffold0044 (95-220)||(9973-10100)
[»] scaffold0038 (1 HSPs)
scaffold0038 (95-220)||(114253-114380)
[»] scaffold0067 (1 HSPs)
scaffold0067 (98-220)||(34822-34947)
[»] scaffold0053 (1 HSPs)
scaffold0053 (140-220)||(22210-22291)
[»] scaffold0352 (1 HSPs)
scaffold0352 (151-220)||(8943-9012)


Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 360
Target Start/End: Original strand, 9385660 - 9386014
Alignment:
Q  14 cataggtacagaggatcatcccggagggtcatccgagaggatgcgccgcnnnnnnnnnn-gtatatatcaacaaaatattaatctagaagtcctaactta 112  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||           |||||||||||||||||||||||||| |||||||||||||    
T  9385660 cataggtacagaggatcatcccggagggtcatccgaaaggatgcgccgcaaaaaaaaaaagtatatatcaacaaaatattaatctaaaagtcctaactta 9385759  T
Q  113 actggtaaatgccgaattacaaggtcagacgtcgtgaccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaa-------ttac 205  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||       ||||    
T  9385760 actggcaaatgccgaattacaaggtcggacgtcgtgaccgggttcaaacgcgggacctcacagttgtatgtcggtttaattttagtgaattaccaattac 9385859  T
Q  206 cactttatctaagacnnnnnnnnnnnnnnnnnnnnnnntactcatcacatctgtaaactgaggcaattatacgtaccacacttttcggttgtttggtata 305  Q
    |||||||| ||||||                       |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9385860 cactttatataagacaaaaaaaataaaaaataaacaaatactcatcacatctgtaaactgaggcaattatacgtaccacatttttcggttgtttggtata 9385959  T
Q  306 cataatgacagaatcgcttatcacattgaacttctccactatcttcatcaacaac 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9385960 cataatgacagaatcgcttatcacattgaacttctccactatcttcatcaacaac 9386014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 28455875 - 28456002
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  28455875 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 28455974  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  28455975 ttcagtggattaccacttcatctaagac 28456002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 32007075 - 32007202
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  32007075 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 32007174  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  32007175 ttcagtggattaccacttcatctaagac 32007202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 45813138 - 45813011
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||  |||||||||| || ||||||| ||| |||||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  45813138 tctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 45813039  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  45813038 ttcagtggattaccacttcatctaagac 45813011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 778578 - 778702
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccgaattacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaatttc 195  Q
    ||||||| ||| || |||||| ||||||||||||||||||||  |||||||||| | |||||||||   |||||| |||||||| |||| ||||||||||    
T  778578 tagaagttctagctcaactggaaaatgccgaattacaaggtcgaacgtcgtgactcaggttcgaacctaggacctgacagttgtgtgtgagtttaatttc 778677  T
Q  196 agtgaattaccactttatctaagac 220  Q
    |||||||||||| || |||||||||    
T  778678 agtgaattaccaattcatctaagac 778702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 5055915 - 5055788
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || | |||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  5055915 tctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 5055816  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  5055815 ttcagtggattaccacttcatctaagac 5055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 29994510 - 29994383
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| |||||||| ||| |||||||||||| || ||||||||| |||| |||| |||||||    
T  29994510 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagtttaat 29994411  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  29994410 ttcagtggtttaccacttcatctaagac 29994383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 41808203 - 41808330
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||| ||||||||||||| |||| ||||| |    
T  41808203 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 41808302  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  41808303 ttcagtggattaccacttcatctaagac 41808330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 20749 - 20876
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||||| |||||||||| || |||||   |||| ||||||| || ||||||| ||||||||||||||||| |||| ||||| |    
T  20749 tctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttatt 20848  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    || |||| |||||||||| |||||||||    
T  20849 tttagtggattaccacttcatctaagac 20876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 48660023 - 48660150
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||  ||||| |||||||||| ||||| ||||||||||| |||| ||||| |    
T  48660023 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttatt 48660122  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  48660123 ttcagtggattaccacttcatctaagac 48660150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 7059501 - 7059595
Alignment:
Q  127 aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| |||||||||||||||||||| |||||||||   | |||||||||||||| |||| ||||||||| |||| ||||||||||||||||||||    
T  7059501 aattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtttaatttaagtggattaccactttatctaagac 7059595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 5943682 - 5943809
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||| ||||| || |||||  |||||||||| || ||||| | |||||||||||| |||||||||| | ||||||||||||||| |||| |||||||    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtttaat 5943781  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||| || |||| ||||| |||||||||    
T  5943782 ttcaatggattatcacttcatctaagac 5943809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 41761538 - 41761411
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||  | |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| | ||||||||||||||| |||| ||||| |    
T  41761538 tctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttatt 41761439  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| ||| |||||    
T  41761438 ttcagtggattaccacttcatccaagac 41761411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 35945798 - 35945924
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || ||||||||||||||||| ||  ||||   ||||| |||||| |||||||||| ||| ||||||||||||| ||||  |||| |    
T  35945798 tctagaagtcctagctcaactggtaaatgccgaaattgtaaggctggacgttgtgacctgggttcgaacccggaacctcacagttgtgtgtgaatttatt 35945897  T
Q  193 ttcagtgaattaccactttatctaaga 219  Q
    ||||||| |||||||||| ||||||||    
T  35945898 ttcagtggattaccacttcatctaaga 35945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 41039373 - 41039303
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| ||||||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  41039373 ccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 41039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 39276357 - 39276478
Alignment:
Q  101 agtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagt 198  Q
    ||||||| || |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| ||||||||||||||| | |||| ||||| |||||||    
T  39276357 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagt 39276456  T
Q  199 gaattaccactttatctaagac 220  Q
    | |||||||||| || ||||||    
T  39276457 ggattaccacttcatttaagac 39276478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 2089032 - 2088908
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||  |||| ||  |||||||||| ||||||| ||||||||||| | | |||||||| ||||||||| ||| |||    
T  2089032 tctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgactcgggttcgaactcagaacctcacaattgtatgtgagttcaat 2088933  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    ||||||| |||||||||| ||||||    
T  2088932 ttcagtggattaccacttcatctaa 2088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 49783708 - 49783835
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||| ||||||||||| || ||| ||||| |||| || |||||||  ||||| |||  ||||||||||| ||| ||||||||||||||||||  ||||||    
T  49783708 tctataagtcctaactcaattggcaaatgtcgaaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtgaatttaat 49783807  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  49783808 ttcagtggtttaccacttcatctaagac 49783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 50106323 - 50106200
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccga-attacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||| ||||||||||||||  || ||| ||||| |  |||| |||| |||||||||||| ||||||||||||||| | |||| ||||| |    
T  50106323 tctagaagtcctaatttaactggtaaatgttgagattgcaaggccgaacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttatt 50106224  T
Q  193 ttcagtgaattaccactttatcta 216  Q
    ||||||| ||| ||| || |||||    
T  50106223 ttcagtggattgccatttcatcta 50106200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 4066019 - 4066089
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||   | ||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  4066019 ccgggttcgaatctgagaccttacaattgtatgtgagtttaatttcagtgaattaccacttcatctaagac 4066089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 13183229 - 13183179
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaa 217  Q
    |||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  13183229 accttacagttgtatgtgagtttaatttcagtgaattaccacttcatctaa 13183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 29587255 - 29587345
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgg 185  Q
    ||||||||||| || |||||| |||||||||| || ||||| | |||||||||||| |||||||||| |||||||||||| |||| |||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtgg 29587345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 13109845 - 13109898
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||| |||| |||||||||||||| |||||||||| |||||||||    
T  13109845 acctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagac 13109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 26032848 - 26032929
Alignment:
Q  140 gacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| ||||||||||  || ||||||||||| | |||| |||||||||||||| |||||| ||| |||||||||    
T  26032848 gacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgagtttaatttcagtggattaccgcttcatctaagac 26032929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 192416 - 192543
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||  ||||||  || || ||||| | ||||| |||| ||| |||||||| | ||||||||||||||| |||| ||||| |    
T  192416 tctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagtttatt 192515  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||| | |||||||||| |||||||||    
T  192516 ttcagcggattaccacttcatctaagac 192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 9232705 - 9232619
Alignment:
Q  274 atacgtaccacacttttcggttgtttggtatacataatgacagaatcgcttatcacattgaacttctccactatcttcatcaacaac 360  Q
    |||| |||| ||||| || |||||||||||  |||||||||| ||  |||||| |||||||||||||||  | ||||||||||||||    
T  9232705 atacataccgcacttatcagttgtttggtaagcataatgacataactgcttattacattgaacttctcctttttcttcatcaacaac 9232619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 35110169 - 35110099
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| | |||||| |||||||| |||| ||||||||| || | |||||||||| |||||||||    
T  35110169 ccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaagac 35110099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 13097379 - 13097432
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||||||||| ||||||||| | || |||||||||| |||||||||    
T  13097379 acctcacagttgtatgtgagtttaattttattggattaccacttcatctaagac 13097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 46447504 - 46447373
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaa- 191  Q
    ||||||||| |||  | |||||| |||||||||| || |||||   |||||||| ||| |||||||||| ||||||||||||||| | |||| ||||||     
T  46447504 tctagaagttctagttcaactggcaaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacagttatgtgtgagtttaat 46447405  T
Q  192 ---tttcagtgaattaccactttatctaagac 220  Q
       |||||||| |||||||| | |||||||||    
T  46447404 tattttcagtggattaccacatcatctaagac 46447373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 39228492 - 39228554
Alignment:
Q  152 gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatcta 216  Q
    |||||||||||||| || |||||||||  |||| ||||||||| | | |||||||||||||||||    
T  39228492 gggttcgaacacggaacatcacagttg--tgtgagtttaattttaataaattaccactttatcta 39228554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 7275682 - 7275806
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||| || ||||| |||||| ||||| |||| ||  |||||| |||||  |||| ||| ||||||| ||| || |||||||||| | || |||||||    
T  7275682 tctagaaatcttaactcaactggcaaatgtcgaaattgtaaggtcggacgttatgactcggattcgaacccggaacttcacagttgtgtatgagtttaat 7275781  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    |||||||  ||||||||| ||||||    
T  7275782 ttcagtggtttaccacttcatctaa 7275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 26264589 - 26264537
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaaga 219  Q
    ||||||||||||| |||| ||||||||||| || |||| ||||| ||||||||    
T  26264589 acctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaaga 26264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 47557782 - 47557909
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||  ||||| ||||| |||||||||| ||| |||||||||||||||||| |||||||    
T  47557782 tctagaagtcctaactcaactggtaaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacagttgtatgtgagtttaat 47557881  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  47557882 ttcagtggtttaccacttcatctaagac 47557909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 25112374 - 25112247
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||| ||||| || ||||||| |||||| ||||| |||||||||| ||||||||||||||||| |||||||||| |    
T  25112374 tctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgggtttatt 25112275  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  25112274 ttcagtggattaccacttcatctaagac 25112247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 25546402 - 25546275
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || ||||||||||||||||| || ||||| | |||||| ||||| |||||||||  ||||||||||||||||| |||| |||||||    
T  25546402 tctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttaat 25546303  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  25546302 ttcagtggtttaccacttcatctaagac 25546275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 2146637 - 2146764
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| |  |||||||||||||| |||||||||| |    
T  2146637 tctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtgggtttatt 2146736  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  2146737 ttcagtggattaccacttcatctaagac 2146764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 4106739 - 4106866
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| |  |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  4106739 tctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 4106838  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  4106839 ttcagtggattaccacttcatctaagac 4106866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 23358186 - 23358313
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||| ||||| || ||||| | |||||||| ||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  23358186 tctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 23358285  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  23358286 ttcagtggattaccacttcatctaagac 23358313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 31770659 - 31770532
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | || ||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  31770659 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 31770560  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  31770559 ttcagtggattaccacttcatctaagac 31770532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 40058239 - 40058366
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||||| ||||||| || || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| | || ||||| |    
T  40058239 tctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagtttatt 40058338  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  40058339 ttcagtggattaccacttcatctaagac 40058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 43753878 - 43753754
Alignment:
Q  98 agaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtg-ggtttaattt 194  Q
    ||||||||||  | |||||| |||||||||| || ||||| | |||||||||||| |||||||||| ||| |||||||||||||||||| | ||||||||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 43753779  T
Q  195 cagtgaattaccactttatctaaga 219  Q
    ||||| |||||||||| ||||||||    
T  43753778 cagtggattaccacttcatctaaga 43753754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 44083941 - 44084065
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||||| || || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  44083941 tctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 44084040  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    ||||||| |||||||||| ||||||    
T  44084041 ttcagtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 27915708 - 27915580
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtgacc--gggttcgaacacgggacctcacagttgtatgtgggtttaa 191  Q
    |||||||||||||||| ||||||||||||| | |||| ||||||| ||||||||||||  | ||||||||    || ||||||||||| | || ||||||    
T  27915708 tctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgaccttgagttcgaacctaagatctcacagttgtgtatgagtttaa 27915609  T
Q  192 tttcagtgaattaccactttatctaagac 220  Q
    ||||| ||||||||||||| |||||||||    
T  27915608 tttcaatgaattaccacttcatctaagac 27915580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 4107322 - 4107437
Alignment:
Q  107 aacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaatta 204  Q
    |||| |||||| |||||||||| || ||||| | ||||||  |||| |||||||||| ||||||||||||||||| |||| ||||| |||||||| ||||    
T  4107322 aactcaactggcaaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggatta 4107421  T
Q  205 ccactttatctaagac 220  Q
    |||||| |||||||||    
T  4107422 ccacttcatctaagac 4107437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 48146787 - 48146881
Alignment:
Q  127 aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| |||||||||| ||||||||| |||||||||| ||||||||||||||||| |||| ||| | ||||| || |||||||||| |||||||||    
T  48146787 aattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttaattttcattggattaccacttcatctaagac 48146881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 27229600 - 27229487
Alignment:
Q  100 aagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtg-ggtttaatttca 196  Q
    ||||||||||| |||||  ||||| |||| || ||||| | |||||||||||| |||||||||| ||||||||||||||||| |||| | ||||||||||    
T  27229600 aagtcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttca 27229501  T
Q  197 gtgaattaccactt 210  Q
    ||| ||||||||||    
T  27229500 gtggattaccactt 27229487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 47250380 - 47250251
Alignment:
Q  93 aatctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttta 190  Q
    ||||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| ||||||||||  |||| |||  |||||| |||| |||||    
T  47250380 aatctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagttta 47250281  T
Q  191 atttcagtgaattaccactttatctaagac 220  Q
     |||||||| |||||||||| |||||||||    
T  47250280 ttttcagtggattaccacttcatctaagac 47250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 32606457 - 32606330
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| |||||| |||||  |||| ||||| || ||||| | ||||||||||||  ||||||||| || ||||| |||||| ||||||  ||||||    
T  32606457 tctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagttttatgtgaatttaat 32606358  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||||| || |||||||||    
T  32606357 ttcagtgaattaccaattcatctaagac 32606330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 47961082 - 47960979
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||| ||||| |||| | ||||||| || ||||||||||||||||| ||| |||||||||||| |||||||||  |||||| |||| |||||||    
T  47961082 tctagaagtcttaactcaacttgcaaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagtttaat 47960983  T
Q  193 ttca 196  Q
    ||||    
T  47960982 ttca 47960979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 38781278 - 38781208
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||||| ||||||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  38781278 ccggattcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 38781208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 47570788 - 47570718
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| ||||| ||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  47570788 ccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 47570718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 220
Target Start/End: Original strand, 8439081 - 8439206
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaattt 194  Q
    |||||||||||  | |||||| ||||||| || || ||||||| ||||| |||||| || ||||||| | ||||||||||||||| ||||  |||| |||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtgaatttatttt 8439180  T
Q  195 cagtgaattaccactttatctaagac 220  Q
    ||||| |||||||||| |||||||||    
T  8439181 cagtggattaccacttcatctaagac 8439206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 11355886 - 11355951
Alignment:
Q  155 ttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||| ||||| ||||||||||| |||| |||||||||||||| |||||||||| |||||||||    
T  11355886 ttcgaacccgggatctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaagac 11355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 29484876 - 29484755
Alignment:
Q  101 agtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagt 198  Q
    ||||||| || |||||| |||||||||| || ||||| | |||||| ||| | ||||| |||| |||||||||||| ||||||||| |||||||||||||    
T  29484876 agtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagt 29484777  T
Q  199 gaattaccactttatctaagac 220  Q
    | |||| ||||| || ||||||    
T  29484776 ggattatcacttcatataagac 29484755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 7162915 - 7162790
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||| |||||||| || |||||| |||||||||| ||  |||| | ||||| |||||| |||||||||| |||||||||||| |||  |||| ||||| |    
T  7162915 tctaaaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaattg--tgtgagtttatt 7162818  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  7162817 ttcagtggattaccacttcatctaagac 7162790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 25872764 - 25872891
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccga-attacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| || ||| ||||||||| ||||||||||| |||||||||| || |||||||||    ||||| ||| |||| | || ||||| |    
T  25872764 tctagaagtcctaactcaattggcaaatgccgatattacaaggtcggacgtcgtgatccaggttcgaacctatgaccttacaattgtgtatgagtttatt 25872863  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||| |||| ||||||||| |||||||||    
T  25872864 ttctgtgatttaccacttcatctaagac 25872891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 38033730 - 38033853
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| |||||| |||||| |||||||||| ||  |||||| ||| | |||| |||||||| ||  ||||||||||||||||| |||| ||||| |    
T  38033730 tctagaagttctaactcaactggcaaatgccgaaattgtaaggtcggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtttatt 38033829  T
Q  193 ttcagtgaattaccactttatcta 216  Q
    ||||||| | |||||||| |||||    
T  38033830 ttcagtggagtaccacttcatcta 38033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 42081686 - 42081619
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| | |||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  42081686 ccgggttcgaac-ctggacctcacagttgt--gtgagtttattttcagtgaattaccactttatctaagac 42081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 25050085 - 25049971
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| |||||| |||| | |||||||||| ||  ||||||||||||||||||| || || |||| |  || |||||||||||||||| |||||||    
T  25050085 tctagaagttctaactcaactagaaaatgccgaaattgaaaggtcagacgtcgtgacctggatttgaactcatgatctcacagttgtatgtgagtttaat 25049986  T
Q  193 ttcagtgaattacca 207  Q
    || |||| |||||||    
T  25049985 ttaagtggattacca 25049971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 48444233 - 48444152
Alignment:
Q  140 gacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| | |||||||||| | | || |||||||||| |||  ||||||||||||||||||||||||| |||||||||    
T  48444233 gacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagtttaatttcagtgaattaccacttcatctaagac 48444152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 34763513 - 34763561
Alignment:
Q  163 cgggacctcacagttgtatgtgggtttaatttcagtgaattaccacttt 211  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  34763513 cgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttt 34763561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 5772946 - 5772819
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||| || || ||| || |||||||||| || ||||||| |||   |||||| |||||||||| ||  ||||||||||||| |||| |||||||    
T  5772946 tctagaagtcttagctcaacgggcaaatgccgaaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaat 5772847  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| || ||||||    
T  5772846 ttcagtggtttaccacttcatttaagac 5772819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 13887174 - 13887282
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaattt 194  Q
    |||||||| ||||| |||||| |||||||||| || ||||  | ||||||||||||  ||||||||| ||| ||||||||||||||  || |||||||||    
T  13887174 tagaagtcttaactcaactggcaaatgccgaacttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagttgta--tgagtttaattt 13887271  T
Q  195 cagtgaattac 205  Q
    ||||| |||||    
T  13887272 cagtggattac 13887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 41183831 - 41183943
Alignment:
Q  110 ttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattacca 207  Q
    |||||||| |||||||||| || ||||| | |||||| ||||| |||||||||| |   ||||||||||| | |||| ||||| |||||||| |||| ||    
T  41183831 ttaactggcaaatgccgaaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatca 41183930  T
Q  208 ctttatctaagac 220  Q
    ||| |||||||||    
T  41183931 cttcatctaagac 41183943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 5587338 - 5587408
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| | |||||||||| ||   |||| ||||||||| |||| |||||||||| |||||||||    
T  5587338 ccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaagac 5587408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 5592299 - 5592369
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| | |||||||||| ||   |||| ||||||||| |||| |||||||||| |||||||||    
T  5592299 ccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaagac 5592369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 56482 - 56609
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||||| ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  56482 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 56581  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  56582 ttcagtggattaccacttcatctaagac 56609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 11816675 - 11816550
Alignment:
Q  98 agaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttt-aattt 194  Q
    |||||||||| || |||||| |||||||||| || ||||||| |||||||||||| |||||||||| ||| |||||||||||||||||| |||| |||||    
T  11816675 agaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 11816576  T
Q  195 cagtgaattaccactttatctaagac 220  Q
    ||||| |||||||||| |||||||||    
T  11816575 cagtggattaccacttcatctaagac 11816550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 10639733 - 10639606
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  10639733 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 10639634  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  10639633 ttcagtggattaccacttcatctaagac 10639606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 11459716 - 11459843
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||||| |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  11459716 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgtgtttatt 11459815  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||| || |||||||||| |||||||||    
T  11459816 ttcaatggattaccacttcatctaagac 11459843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 33083681 - 33083554
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  33083681 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 33083582  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  33083581 ttcagtggattaccacttcatctaagac 33083554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 23839860 - 23839987
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||||| ||||||| || || ||||| | ||||| |||||| ||||||||||  |||||||||||||||| |||| ||||| |    
T  23839860 tctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagtttatt 23839959  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  23839960 ttcagtggattaccacttcatctaagac 23839987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 26605625 - 26605752
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| ||||  |||| |    
T  26605625 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgaatttatt 26605724  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  26605725 ttcagtggattaccacttcatctaagac 26605752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 39535661 - 39535534
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||| | ||||| |||| || ||||| | |||||||||||| |||||||||| ||||||||||||||| |||||| |||||||    
T  39535661 tctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagtttaat 39535562  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    || || | |||||||||| |||||||||    
T  39535561 ttgagcggattaccacttcatctaagac 39535534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 11708679 - 11708803
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| ||  |||| | ||||| |||||| |||||||||| | ||||||||||||||| |||||||||| |    
T  11708679 tctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgggtttatt 11708778  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    ||||||| |||||||||| ||||||    
T  11708779 ttcagtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 19537308 - 19537435
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||  | |||||| |||||||||| || ||||| | ||||| |||| |||||||||||| ||| ||||||||||||| |||| ||||| |    
T  19537308 tctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgtttatt 19537407  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  19537408 ttcagtggattaccacttcatctaagac 19537435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 37197720 - 37197610
Alignment:
Q  112 aactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccact 209  Q
    |||||| |||||||||| || |||||   |||||||||||| |||||||||| ||||||||||||||||| |||| ||||| |||||||| |||||||||    
T  37197720 aactggcaaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccact 37197621  T
Q  210 ttatctaagac 220  Q
    | |||||||||    
T  37197620 tcatctaagac 37197610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 19048755 - 19048882
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| ||  |||| | |||||| ||| |||||||||||| |||||||||||| |||| |||| ||||| |    
T  19048755 tctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttagt 19048854  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  19048855 ttcagtggtttaccacttcatctaagac 19048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 33001751 - 33001830
Alignment:
Q  141 acgtcgtgaccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||| |||||||||||| ||||||||||||| |||||| |||||||||||||| ||||||| || |||||||||    
T  33001751 acgttgtgactgggttcgaacacaggacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaagac 33001830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 34460370 - 34460497
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||  |||||||||| || ||||| | ||||| |||||| |||||||||| | | ||||||||||||| |||| ||||| |    
T  34460370 tctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtttatt 34460469  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  34460470 ttcagtggattaccacttcatctaagac 34460497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 45125292 - 45125165
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| ||  |||| | ||||| |||||  |||||||||| ||| ||||||||||||| |||| ||||| |    
T  45125292 tctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagtttatt 45125193  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  45125192 ttcagtggattaccacttcatctaagac 45125165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 27138044 - 27137918
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatt 193  Q
    ||||||||||||| || |||||  |||||| ||| |  |||| |  || |||||||| |||||||||| |||||||| |||||| |||||| ||||||||    
T  27138044 tctagaagtcctagctcaactgacaaatgctgaaattgaaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagtttaatt 27137945  T
Q  194 tcagtgaattaccactttatctaagac 220  Q
    |||||| |||||||||| |||||||||    
T  27137944 tcagtggattaccacttcatctaagac 27137918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 39831570 - 39831444
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||| |||||||| || |||||| |||| ||||| || ||||| | |||||| ||| |||||||||||| |||||||||||| |||| |||| |||||||    
T  39831570 tctataagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaac-cgggacctcacaattgtgtgtgagtttaat 39831472  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  39831471 ttcagtggtttaccacttcatctaagac 39831444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 16654366 - 16654488
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaattt 194  Q
    |||||||||||||| ||||| ||||||||||| || ||||| | |||| ||||| ||| |||||||| ||| ||||||||||||| |||| ||||| |||    
T  16654366 tagaagtcctaactcaactgataaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagtttatttt 16654465  T
Q  195 cagtgaattaccactttatctaa 217  Q
     |||||||| || ||| ||||||    
T  16654466 tagtgaattgccccttcatctaa 16654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 4851367 - 4851448
Alignment:
Q  140 gacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| |||||||| ||| ||||||||||||||||| |||| ||||||||| |||| |||||||||| ||| |||||    
T  4851367 gacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtttaattttagtggattaccacttcatccaagac 4851448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 7276014 - 7275886
Alignment:
Q  95 tctagaagtcctaacttaactggtaaa-tgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaa 191  Q
    |||||||||||||||| |||||  ||| ||||||| || ||||||| || |||||| || |||||||||| ||||||||||||||||| |||   |||||    
T  7276014 tctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtggcccgggttcgaacccgggacctcacagttgtgtgtaaatttaa 7275915  T
Q  192 tttcagtgaattaccactttatctaagac 220  Q
    ||| | || |||||||||| |||||||||    
T  7275914 ttttaatggattaccacttcatctaagac 7275886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 34239948 - 34239820
Alignment:
Q  94 atctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaa 191  Q
    |||||||||||||||||  ||| | |||||||||| ||  |||||||||||||||||| || |||||||| | | |||| |||||||| | || ||||||    
T  34239948 atctagaagtcctaactctactagcaaatgccgaaattgtaaggtcagacgtcgtgactcgagttcgaactcagaaccttacagttgtgtatgagtttaa 34239849  T
Q  192 tttcagtgaattaccactttatctaagac 220  Q
    ||||| | ||||||||||| || ||||||    
T  34239848 tttcaataaattaccacttcatttaagac 34239820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 29659288 - 29659218
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| |  |||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  29659288 ccgggttcgaacccatgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 29659218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 42578243 - 42578296
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  42578243 acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 42578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 19816221 - 19816348
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||| ||| |||| ||||| | ||||| |||| ||||||| |||| ||| ||||| ||||||| | || ||||| |    
T  19816221 tctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagtttatt 19816320  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||  ||||| |||| |||||||||    
T  19816321 ttcagtagattacaacttcatctaagac 19816348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 20497715 - 20497592
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaattt 194  Q
    |||||||||||||| |||| | ||||| || ||||| |||||   |||||||||  | ||||| ||| ||| |||||||| ||||||||| |||| ||||    
T  20497715 tagaagtcctaactcaactagaaaatgtcgaaattataaggttgaacgtcgtgattcaggttcaaacccggaacctcacaattgtatgtgagttttattt 20497616  T
Q  195 cagtgaattaccactttatctaag 218  Q
    |||||  ||||||||| |||||||    
T  20497615 cagtggtttaccacttcatctaag 20497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 4800923 - 4801001
Alignment:
Q  140 gacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaa 217  Q
    |||||||||||| | |||||||| ||| ||||| | ||| | |||| |||||||| |||||||||||||||| ||||||    
T  4800923 gacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattccagtgaattaccacttcatctaa 4801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 44181944 - 44181887
Alignment:
Q  163 cgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||| ||||||||||| |||| ||||| |||||||| |||| ||||| |||||||||    
T  44181944 cgggatctcacagttgtgtgtgagtttattttcagtggattatcacttaatctaagac 44181887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 34234531 - 34234656
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||| |||| ||||||| || || |||| | | ||| |||| || ||||||| |||||  |||| |||||||    
T  34234531 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggatgttgtgatctgagtttgaacccgagacctcatagttg--tgtgagtttaat 34234628  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||  || ||||||| |||||||||    
T  34234629 ttcagtagatcaccacttcatctaagac 34234656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 45201999 - 45201903
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggttt 189  Q
    |||||||||||||||| || ||| ||||| |||| ||  |||||| | |||||||| ||| |||||||| ||| ||||||||||||| |||| ||||    
T  45201999 tctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtgatccgagttcgaactcggaacctcacagttgtgtgtgagttt 45201903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 989 - 862
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  989 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 890  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  889 ttcagtggattaccacttcatctaagac 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 70650 - 70523
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||||| |||||| ||||| ||||| |||| ||||||||||||||||| |||| ||||| |    
T  70650 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtttatt 70551  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  70550 ttcagtggattaccacttcatctaagac 70523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 6602645 - 6602518
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  6602645 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 6602546  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  6602545 ttcagtggattaccacttcatctaagac 6602518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 6678098 - 6677971
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  6678098 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 6677999  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  6677998 ttcagtggattaccacttcatctaagac 6677971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 32333115 - 32333242
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  32333115 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 32333214  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  32333215 ttcagtggattaccacttcatctaagac 32333242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 45264766 - 45264640
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaattacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaatt 193  Q
    |||||||||||||||| |||||| |||||||||| |   |||||  |||||||||| ||||||||||| ||||||||||||||| | |||| ||||||||    
T  45264766 tctagaagtcctaactcaactggcaaatgccgaaattgcaggtcgaacgtcgtgactcgggttcgaacccgggacctcacagttttgtgtgagtttaatt 45264667  T
Q  194 tcagtgaattaccactttatctaagac 220  Q
    |||||| ||||||||||  ||||||||    
T  45264666 tcagtggattaccacttcctctaagac 45264640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 1078775 - 1078648
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||| || || ||||||||||||||||| || ||||| | |||||| |||||  ||||||||| ||||||||||||||||| |||| ||||| |    
T  1078775 tctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagtttatt 1078676  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  1078675 ttcagtggattaccacttcatctaagac 1078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 28817257 - 28817384
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | ||||| |||||| |||||||||| ||||| ||||||||||| |||| ||||| |    
T  28817257 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagtttatt 28817356  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  28817357 ttcagtggattaccacttcatctaagac 28817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 31969847 - 31969720
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||| || ||||| ||| |||||||||| || ||||| |||||||| ||| ||||||||||||||||||||||| |||||| ||||  ||||||    
T  31969847 tctagaagtcatagcttaattggcaaatgccgaaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtgaatttaat 31969748  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  31969747 ttcagtggtttaccacttcatctaagac 31969720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 35779624 - 35779497
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||||| || || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  35779624 tctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 35779525  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  35779524 ttcagtggattaccacttcatctaagac 35779497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 42192766 - 42192639
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| | |||||||| ||||| ||||||||||| |||| ||||| |    
T  42192766 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagtttatt 42192667  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  42192666 ttcagtggattaccacttcatctaagac 42192639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 10963367 - 10963242
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| |||||||| |  |||| |||| || ||||||||| ||||||||||||||||  |||| ||||| |    
T  10963367 tctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttg--tgtgagtttatt 10963270  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  10963269 ttcagtggattaccacttcatctaagac 10963242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 1467 - 1340
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||| ||||||| || || ||||| | ||||| ||||||  ||||||||| ||||||||||||||||| |||| ||||| |    
T  1467 tctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagtttatt 1368  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  1367 ttcagtggattaccacttcatctaagac 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 4531109 - 4530982
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || || ||| |||||||||| || |||||   |||||| ||||| |||||||||| ||||||||||||| ||| |||| |||||||    
T  4531109 tctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagtttaat 4531010  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  4531009 ttcagtggtttaccacttcatctaagac 4530982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 7792662 - 7792789
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || |||||   ||||| ||||| ||||||||||| ||||| ||||||||||| |||| ||||| |    
T  7792662 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtttatt 7792761  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| ||||| |||| |||||||||    
T  7792762 ttcagtggattactacttcatctaagac 7792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 40911222 - 40911347
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||| |||||||||| || ||||| | |||||||||||| |||||||||| ||||||||||||  ||| |||| |||||||    
T  40911222 tctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaac-cgggacctcacaactgtgtgtgagtttaat 40911320  T
Q  193 ttcagtgaattaccactttatctaaga 219  Q
    |||||||  ||||||||| ||||||||    
T  40911321 ttcagtggcttaccacttcatctaaga 40911347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 42885192 - 42885302
Alignment:
Q  112 aactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccact 209  Q
    |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||| ||||||||||| |||| ||||| |||||||| |||||||||    
T  42885192 aactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccact 42885291  T
Q  210 ttatctaagac 220  Q
    | |||||||||    
T  42885292 tcatctaagac 42885302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 7813323 - 7813447
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || ||| || |||||| ||| || ||||| | || || ||||| ||||||||||| ||||||||||||||||| |||| ||||| |    
T  7813323 tctagaagtcctagctcaaccggcaaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtttatt 7813422  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    ||||||| |||||||||| ||||||    
T  7813423 ttcagtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 3822397 - 3822524
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| |||  | |||||| |||||||||| ||  |||||| ||||| |||||| |||||||||| | ||| ||||||||||| |||| |||||||    
T  3822397 tctagaagttctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgacccgggttcgaacccaggatctcacagttgtgtgtgagtttaat 3822496  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    || |||||||||||||||  ||||||||    
T  3822497 tttagtgaattaccacttcttctaagac 3822524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 5385385 - 5385456
Alignment:
Q  140 gacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactt 210  Q
    ||||||||||||  ||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  5385385 gacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgatttaccactt 5385456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 39303313 - 39303438
Alignment:
Q  98 agaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttt-aattt 194  Q
    |||||||||| || |||||| |||||||||| || ||||| | |||||| ||||  ||||| |||| || |||||||||||||| |||| |||| |||||    
T  39303313 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagttttaattt 39303412  T
Q  195 cagtgaattaccactttatctaagac 220  Q
    ||||| |||||||||| |||||||||    
T  39303413 cagtggattaccacttcatctaagac 39303438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 12534845 - 12534720
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||| |||| ||||| | |||||||||| |||||||||||| | ||| ||||||||||   ||| ||||| |    
T  12534845 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagttg--cgtgagtttatt 12534748  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||  |||||||||| |||||||||    
T  12534747 ttcagtagattaccacttcatctaagac 12534720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 41849354 - 41849233
Alignment:
Q  99 gaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttca 196  Q
    |||||| ||| | |||||| |||||||||| || ||||||| |||||||||| | |||||||||  ||| ||||||| ||||| |||| |||||||||||    
T  41849354 gaagtcttaattcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaatttca 41849255  T
Q  197 gtgaattaccactttatctaaga 219  Q
    ||| ||||||| || ||||||||    
T  41849254 gtg-attaccatttcatctaaga 41849233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 31532181 - 31532128
Alignment:
Q  164 gggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaa 217  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||| ||||||    
T  31532181 gggacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa 31532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 18752381 - 18752468
Alignment:
Q  133 aaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaaga 219  Q
    |||||| |||||||||| |||| ||||||| ||| |||| |||||||| ||||||||||||||||||| |||  ||||| || |||||    
T  18752381 aaggtcggacgtcgtgatcggggttcgaacccggaaccttacagttgtgtgtgggtttaatttcagtggattgacacttcatntaaga 18752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 39435283 - 39435410
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||| ||||| | || || ||||||| |||||| ||| | |||||||||| || |||||||||||||| |||| |||||||    
T  39435283 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttcgaacccgagacctcacagttgtgtgtgagtttaat 39435382  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||  ||| ||||| |||| |||||||||    
T  39435383 ttatgtggattacgacttcatctaagac 39435410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 13891149 - 13891218
Alignment:
Q  151 cgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||   ||||||||||||||| |||| ||||| ||||||||  ||||||||| |||||||||    
T  13891149 cgggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaagac 13891218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 2907054 - 2907142
Alignment:
Q  132 caaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttc-agtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| ||||||| |||| ||||||||||||||  |||| | |||||||||| |||| ||||||||||  ||||||||    
T  2907054 caaggtcggacgtcgtgatccgggtttgaacccgggacctcacagt--tatgggagtttaatttcaagtggattaccacttcgtctaagac 2907142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 7403782 - 7403696
Alignment:
Q  133 aaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaaga 219  Q
    |||||| ||||||||||| || |||||||  || ||| |||||||||| |||| | |||||||||||| |||||||||| ||||||||    
T  7403782 aaggtcggacgtcgtgactcgagttcgaatccgagacatcacagttgtttgtgagcttaatttcagtg-attaccacttcatctaaga 7403696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 42364752 - 42364702
Alignment:
Q  170 tcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| |||| |||||||||||||   |||||||||||||||||||    
T  42364752 tcacagttgtgtgtgagtttaatttcagtagtttaccactttatctaagac 42364702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 18386709 - 18386806
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggttta 190  Q
    ||||||||| ||| || |||||  |||||| ||| || ||||||| || ||| |||| ||||||||||| ||||||||||||||||| |||| |||||    
T  18386709 tctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagttta 18386806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 29425422 - 29425479
Alignment:
Q  163 cgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||| ||| || |||| |||| |||||||||||||| |||||||||| |||||||||    
T  29425422 cgggatctcgcaattgtgtgtgagtttaatttcagtggattaccacttcatctaagac 29425479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 31695334 - 31695269
Alignment:
Q  155 ttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||||| |||| |||| ||||||||||| ||  ||||||||| |||||||||    
T  31695334 ttcgaacctgggacctcacaattgtgtgtgagtttaatttcaatggtttaccacttcatctaagac 31695269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 9775110 - 9775042
Alignment:
Q  152 gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| ||| ||||||||||| | |||| ||||||||| | || ||||| |||| |||||||||    
T  9775110 gggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaagac 9775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 33621495 - 33621622
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| |||||||    
T  33621495 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaat 33621594  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  33621595 ttcagtggtttaccacttcatctaagac 33621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 33704217 - 33704344
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  33704217 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 33704316  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| || ||||||    
T  33704317 ttcagtggattaccacttcatttaagac 33704344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 21000693 - 21000820
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| |  ||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||    
T  21000693 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtgggtttaat 21000792  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||| ||||    
T  21000793 ttcagtggtttaccacttcatctgagac 21000820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 28322933 - 28323060
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| ||  |||| | |||||| ||| |||||||||||| |||||||||||| |||| |||| ||||| |    
T  28322933 tctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttagt 28323032  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  28323033 ttcagtggtttaccacttcatctaagac 28323060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 4464152 - 4464255
Alignment:
Q  119 aaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatcta 216  Q
    |||||||||| || ||||| | |||||| ||| ||||||||||||  |||||||||||||||| |||| ||||||||||||||  ||||||||| |||||    
T  4464152 aaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatcta 4464251  T
Q  217 agac 220  Q
    ||||    
T  4464252 agac 4464255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 21037292 - 21037418
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgac-cgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||| |||||| ||| || ||||| | ||||| ||||| ||||||||||  ||| ||||||||||||| |||| ||||| |    
T  21037292 tctagaagttctagctcaactggcaaatgctgaaattgcaaggccggacgttgtgactcgggttcgaatccgg-acctcacagttgtgtgtgagtttatt 21037390  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||||||||||||| |||||||||    
T  21037391 ttcagtgaattaccacttcatctaagac 21037418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 361070 - 361139
Alignment:
Q  151 cgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||| ||| ||||||||||| |||||| |||||||||||||| |||| ||||| |||||||||    
T  361070 cgggttcgaacccggaacctcacagttatatgtgagtttaatttcagtggattaacacttcatctaagac 361139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 19145505 - 19145598
Alignment:
Q  127 aattacaaggtcagacgtcgtgaccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||| | |||||||||||| | || |||| |||||||||||| |||| ||||  ||||||||||||| |||||||||| |||||||||    
T  19145505 aattgcaaggccggacgtcgtgacccgttttgaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatctaagac 19145598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 29009715 - 29009650
Alignment:
Q  155 ttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||  |||||||||||||||| |||| ||||| ||| ||||||||||||||| |||||||||    
T  29009715 ttcgaacctgggacctcacagttgtgtgtgagtttatttttagtgaattaccacttcatctaagac 29009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 35218697 - 35218640
Alignment:
Q  163 cgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  35218697 cgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 35218640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 2959150 - 2959277
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||| | |||||||||| || ||||| | ||  |||||||   ||||||||| || |||||||||||||| |||| |||||||    
T  2959150 tctagaagtcctaactcaactagcaaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagtttaat 2959249  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||| ||| | |||||||| |||| ||||    
T  2959250 ttccgtggaataccacttcatcttagac 2959277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 11572048 - 11572106
Alignment:
Q  133 aaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttta 190  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||| |||| |||||    
T  11572048 aaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 11572106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 10999459 - 10999418
Alignment:
Q  169 ctcacagttgtatgtgggtttaatttcagtgaattaccactt 210  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  10999459 ctcacagttgtatgtgagtttaatttcagtggattaccactt 10999418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 16518457 - 16518549
Alignment:
Q  127 aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||||| ||||| |||||| |||||||||| | ||| ||||||||||  |||| ||||| |||||||| ||||||| || |||||||||    
T  16518457 aattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagttg--tgtgagtttattttcagtggattaccatttcatctaagac 16518549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 28592182 - 28592128
Alignment:
Q  166 gacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||||| |||| ||||| ||||| || ||||||| ||||||||||||    
T  28592182 gacctcacagttgtgtgtgagtttattttcaatggattaccaatttatctaagac 28592128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 32289408 - 32289473
Alignment:
Q  155 ttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||| || |||||||||||||| |||  ||||| | ||||||||||||||||| ||| |||||    
T  32289408 ttcgaactcgagacctcacagttgtgtgtaagtttattatcagtgaattaccacttcatcaaagac 32289473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 24619159 - 24619079
Alignment:
Q  141 acgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||| | |||||| | || ||||||| | |||| |||| |||||||||||||  |||||||||| |||||||||    
T  24619159 acgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagtttaatttcagtcgattaccacttcatctaagac 24619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 13203958 - 13204085
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||||||||| |||||||||| ||||||||||||||| | |||| ||||| |    
T  13203958 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttatt 13204057  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  13204058 ttcagtggattaccacttcatctaagac 13204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 27721432 - 27721549
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||| ||| |||||||||||| ||||| |||| ||||||||||||||||||||||  ||||||    
T  27721432 tctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtgaatttaat 27721531  T
Q  193 ttcagtgaattaccactt 210  Q
    ||||||| ||||||||||    
T  27721532 ttcagtggattaccactt 27721549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 35317824 - 35317697
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||||| |||||  ||||| ||| |||||| ||||||||||||||||| |||| ||||| |    
T  35317824 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagtttatt 35317725  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  35317724 ttcagtggattaccacttcatctaagac 35317697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 21018224 - 21018351
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||||| || || | ||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  21018224 tctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 21018323  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  21018324 ttcagtggattaccacttcatctaagac 21018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 29265876 - 29266003
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||| | ||||| |||| ||||||||||  | || |||||| || ||||||| ||||||||||||||||| |||| ||||| |    
T  29265876 tctagaagtcctaactcaactagaaaatgtcgaaattacaaggtcgaatgttgtgacccggattcgaacccgggacctcacagttgtgtgtgagtttatt 29265975  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  29265976 ttcagtggattaccacttcatctaagac 29266003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 31909479 - 31909385
Alignment:
Q  127 aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||| |||||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  31909479 aattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 31909385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 4825068 - 4824939
Alignment:
Q  93 aatctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggttta 190  Q
    ||||||||||||||| || |||||| |||||||||| || ||||| | ||||| ||||||  ||||| ||| ||||||||||||||||| |||| |||||    
T  4825068 aatctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagttta 4824969  T
Q  191 atttcagtgaattaccactttatctaagac 220  Q
     ||||| || |||||||||| |||||||||    
T  4824968 ttttcaatggattaccacttcatctaagac 4824939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 1191667 - 1191543
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||| |||| || ||||| | |||||||||| |||||||||||| |||||||||||| |||| |||| |||||||    
T  1191667 tctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtttaat 1191568  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    |||||||  |||| |||| ||||||    
T  1191567 ttcagtggcttacaacttcatctaa 1191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 2970985 - 2971112
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || ||||| |||||| |||| ||  |||||||||||| |||||| ||||||||||  | |||||||||||||| |||| ||||| |    
T  2970985 tctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacagttgtgtgtgagtttatt 2971084  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||| ||| |||||||||| |||||||||    
T  2971085 ttcggtggattaccacttcatctaagac 2971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 12257357 - 12257484
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||| ||||  |||| ||||||| |||||| |||||||||| | |||||||| | |||| |||| ||||| |    
T  12257357 tctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagtttatt 12257456  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  12257457 ttcagtggattaccacttcatctaagac 12257484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 9577088 - 9576985
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||| ||| || ||||| |||||||| ||||| |||||||||| | | |||||||||||||||||| |||||||    
T  9577088 tctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagtttaat 9576989  T
Q  193 ttca 196  Q
    ||||    
T  9576988 ttca 9576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 217
Target Start/End: Original strand, 6020995 - 6021117
Alignment:
Q  97 tagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaattt 194  Q
    |||||||||||||| || ||| ||||| | || || ||||| | ||||| |||||| || ||||||| ||||||||| ||||||| |||| ||||| |||    
T  6020995 tagaagtcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtttatttt 6021094  T
Q  195 cagtgaattaccactttatctaa 217  Q
    ||||| |||||||||||||||||    
T  6021095 cagtggattaccactttatctaa 6021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 8734000 - 8734125
Alignment:
Q  98 agaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtg-ggtttaattt 194  Q
    |||||||||| || |||||| |||||| ||| || ||||| | ||||||||||||  ||||||||| ||| |||||||||||||| ||| | ||||| ||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagttttaactt 8734099  T
Q  195 cagtgaattaccactttatctaagac 220  Q
    ||||| |||||||||| |||||||||    
T  8734100 cagtggattaccacttcatctaagac 8734125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 35545996 - 35546061
Alignment:
Q  155 ttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||||||||||||||||||||||||| |||| |||| ||||| |||||||||    
T  35545996 ttcgaacctgggacctcacagttgtatgtgggtttaatttaagtggattatcacttcatctaagac 35546061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 32143471 - 32143414
Alignment:
Q  163 cgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  32143471 cgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 32143414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 11124653 - 11124780
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||| | || || ||||| | ||||||||||||  | ||||||| | | |||||| | || ||||||||||||||    
T  11124653 tctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaacccagaacctcataattttatgtgggtttaat 11124752  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    || |||| |||||||||| |||||||||    
T  11124753 ttgagtggattaccacttcatctaagac 11124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 40177625 - 40177749
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| ||||||||  ||||| || |||| ||||| | ||||| |||||| || ||| ||| ||| || |||| ||||| |||| ||||| |    
T  40177625 tctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtttatt 40177724  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    ||||||| |||||||||| ||||||    
T  40177725 ttcagtggattaccacttcatctaa 40177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 2786272 - 2786398
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||| | || ||| |||||||| ||||  |||||| |||| ||||| |||  ||| |||  |||||||||||||||| | || ||||||     
T  2786272 tctagaagtcctaattcaattggcaaatgccgaaattgtaaggtcggacgccgtgatccgaattcaaacctgggacctcacagttgtgtatgagtttaa- 2786370  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  2786371 ttcagtggattaccacttcatctaagac 2786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 17984811 - 17984745
Alignment:
Q  151 cgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaa 217  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||  ||| ||||| ||||||    
T  17984811 cgggttcgaacccggaacctcacagttgtgtgtgagtttaattttagtggcttatcacttcatctaa 17984745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 1173952 - 1174079
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  1173952 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttatt 1174051  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  1174052 ttcagtggattaccacttcatctaagac 1174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 34739281 - 34739408
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  34739281 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 34739380  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  34739381 ttcagtggattaccacttcatctaagac 34739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 53457825 - 53457952
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||||| |||||| ||||| |||||||||  ||||||||||||||||| |||| ||||| |    
T  53457825 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttatt 53457924  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  53457925 ttcagtggattaccacttcatctaagac 53457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 55400223 - 55400356
Alignment:
Q  89 tattaatctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtggg 186  Q
    ||||| ||||||| |||||||| ||||||||||||||||| || ||||| | |||||| ||| |||| ||||||| ||| |||||| ||||||||||| |    
T  55400223 tattagtctagaaatcctaactcaactggtaaatgccgaaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgag 55400322  T
Q  187 tttaatttcagtgaattaccactttatctaagac 220  Q
    |||| |||||||| |||||||||| |||||||||    
T  55400323 tttattttcagtggattaccacttcatctaagac 55400356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 19849630 - 19849503
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||||||| |||||||||||| ||||||||||||||||| |||| ||||| |    
T  19849630 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 19849531  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||| ||  ||||||||| |||||||||    
T  19849530 ttcaatggtttaccacttcatctaagac 19849503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 26424984 - 26424858
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  26424984 tctagaagtcctagctcaactggcaaatgccgaaattgcaagg-cggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 26424886  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  26424885 ttcagtggattaccacttcatctaagac 26424858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 28798515 - 28798388
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||  | |||||| |||||||||| || ||||| | |||||||||||| |||||||||| |||||||| |||||||| |||| ||||| |    
T  28798515 tctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttatt 28798416  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  28798415 ttcagtggattaccacttcatctaagac 28798388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 43140033 - 43139906
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  43140033 tctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 43139934  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  43139933 ttcagtggattaccacttcatctaagac 43139906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 55214648 - 55214779
Alignment:
Q  90 attaatctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggt 187  Q
    |||| |||||||||| ||||| |||||  ||||||| || || ||||| | |||||||||||| |||||||||| ||||||||||||||||| | || ||    
T  55214648 attagtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagt 55214747  T
Q  188 ttaatttcagtgaattaccactttatctaaga 219  Q
    ||| |||||||| |||||||||||||||||||    
T  55214748 ttattttcagtggattaccactttatctaaga 55214779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 18257330 - 18257457
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||| |||||||||| | |||||||||||||||||  ||| ||||| |    
T  18257330 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtttatt 18257429  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  18257430 ttcagtggattaccacttcatctaagac 18257457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 45874056 - 45874183
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||  ||||||| || || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  45874056 tctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 45874155  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  45874156 ttcagtggattaccacttcatctaagac 45874183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 39807865 - 39807962
Alignment:
Q  115 tggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactt 210  Q
    |||||||||||||| || ||||| ||||| |||||||| | |||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  39807865 tggtaaatgccgaaattgcaaggccagacatcgtgacccgagttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccactt 39807962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 54768559 - 54768432
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| | ||||||||||||||| || | ||||  |    
T  54768559 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagtttttt 54768460  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  54768459 ttcagtggattaccacttcatctaagac 54768432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 12735471 - 12735559
Alignment:
Q  133 aaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||||| |||||| |||||||||| | ||||||||||||||| |||| ||||| |||||||| |||||||||| |||||||||    
T  12735471 aaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 12735559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 238585 - 238458
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||  |||||||||| || |||||   |||| | ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  238585 tctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttatt 238486  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| ||| |||||    
T  238485 ttcagtggattaccacttcatcgaagac 238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 12867842 - 12867969
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||  |||||||||| || ||||||| |||||||||||| | ||||||||  |||| |||||||||||  ||| ||||| |    
T  12867842 tctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtttatt 12867941  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  12867942 ttcagtggattaccacttcatctaagac 12867969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 2075565 - 2075633
Alignment:
Q  152 gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| ||||||||||||||| | |||| ||||||||||| ||| ||| |||||||||||||||    
T  2075565 gggttcgaacccgggacctcacagttatgtgtgagtttaatttcaatgatttatcactttatctaagac 2075633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 23417603 - 23417483
Alignment:
Q  102 gtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtg 199  Q
    |||||| || |||||| ||||||| || || ||||| | ||||| |||||| |||||||||| |||||| | |||||||| |||| ||||| ||||||||    
T  23417603 gtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtg 23417504  T
Q  200 aattaccactttatctaagac 220  Q
     |||||||||| |||||||||    
T  23417503 gattaccacttcatctaagac 23417483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 1966611 - 1966678
Alignment:
Q  153 ggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||  ||||||||||||||||| |||| |||||||||||||| ||||| |||| |||||||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaagac 1966678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 23710460 - 23710337
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||| || || |||||||||||| |||| || ||||| | |||||||||||| || |||||||  || |||||||||||   |||| |||||||    
T  23710460 tctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtttaat 23710361  T
Q  193 ttcagtgaattaccactttatcta 216  Q
    ||||||| |||||||||| |||||    
T  23710360 ttcagtggattaccacttcatcta 23710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 11277983 - 11278106
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | ||| || ||||| |||||| ||| |||||||||||||||||    | |||||||    
T  11277983 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagttgt----gagtttaat 11278078  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  11278079 ttcagtggtttaccacttcatctaagac 11278106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 220
Target Start/End: Original strand, 19225261 - 19225387
Alignment:
Q  96 ctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatt 193  Q
    |||||||||||| || |||||| |||||||||| ||  || | | |||||| ||| |||||||||||| |||||||||||| ||||  ||| ||||| ||    
T  19225261 ctagaagtcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtttagtt 19225360  T
Q  194 tcagtgaattaccactttatctaagac 220  Q
    ||||||  ||||||||| |||||||||    
T  19225361 tcagtggtttaccacttcatctaagac 19225387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 22608019 - 22608113
Alignment:
Q  127 aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||| | |||||||||||| |||||||||| ||||||||||||||||| | || ||||||||||| || ||||| |||| |||| ||||    
T  22608019 aattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagtttaatttcaatggattactacttcatctgagac 22608113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 29581137 - 29581044
Alignment:
Q  127 aattacaaggtcagacgtcgtgaccg-ggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||| | ||||||||||||  ||||||||| || |||||||||||||| |||| ||||||||| |||| |||||||||| |||||||||    
T  29581137 aattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagttgtgtgtgagtttaattt-agtggattaccacttcatctaagac 29581044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 37134049 - 37134166
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||  | |||||| |||||| ||| |||||||||| || ||| ||| |||||||||||| ||  || |||||||||| |||| |||||||    
T  37134049 tctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagtttaat 37134148  T
Q  193 ttcagtgaattaccactt 210  Q
    |||||||  |||||||||    
T  37134149 ttcagtggtttaccactt 37134166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 19674056 - 19673929
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||| || || ||||||||||||  ||| || ||||| |  |||| |||||| |||||||||| |||||||||||| || | || | |||||||    
T  19674056 tctagaagtcttagctcaactggtaaatgtagaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgagtttaat 19673957  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| || ||||||    
T  19673956 ttcagtggattaccacttcatttaagac 19673929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 23532118 - 23532165
Alignment:
Q  163 cgggacctcacagttgtatgtgggtttaatttcagtgaattaccactt 210  Q
    |||||| |||||||||| |||| |||||||||||||||||||||||||    
T  23532118 cgggacttcacagttgtgtgtgagtttaatttcagtgaattaccactt 23532165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 32441211 - 32441125
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgt 179  Q
    ||||||||||||| || |||||| ||||| |||| || ||||| ||||| || ||||| |||||||||| |||||||||||||||||    
T  32441211 tctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgt 32441125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 50033440 - 50033510
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||| | ||| |||||||||| |||  ||||||||||| ||||||||||||| || ||||||    
T  50033440 ccgggttcgaacatgagacatcacagttgtgtgtaagtttaatttcaatgaattaccacttcatataagac 50033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 31015057 - 31015110
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||| |||||||||    
T  31015057 acctcacagttgtgtgtgagtttaatttcagtgctttaccacttcatctaagac 31015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 51287641 - 51287730
Alignment:
Q  133 aaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttt-aatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||||||| | |||||  ||| ||  ||||||||||||| |||| |||| |||||||||||||||||| || |||||||||    
T  51287641 aaggtcagacgtcgtgatctgggtttaaacccgaaacctcacagttgtgtgtgagttttaatttcagtgaattaccatttcatctaagac 51287730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 52172043 - 52171990
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||| |||| |||| |||||||||||||| ||||||||||||| ||||||    
T  52172043 acctcacaattgtgtgtgagtttaatttcagtggattaccactttatttaagac 52171990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 33770628 - 33770696
Alignment:
Q  152 gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| |||||| ||| |||||| |||| ||||||||||||||  ||||| ||| |||||||||    
T  33770628 gggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatctaagac 33770696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 12767088 - 12767191
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || ||||||||||||||||| ||  ||| || |||||| ||| | |||||||||  ||  ||||||||||||| |||| |||||||    
T  12767088 tctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagtttaat 12767187  T
Q  193 ttca 196  Q
    ||||    
T  12767188 ttca 12767191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 32778159 - 32778238
Alignment:
Q  127 aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattacca 207  Q
    |||| ||||||| |||||||||| ||||||||||||||| ||||||||| |||  |||| ||||| ||| |||| |||||||    
T  32778159 aattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaattg--tgtgagtttatttttagtggattacca 32778238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 16555382 - 16555435
Alignment:
Q  167 acctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    ||||||||||||| ||||  |||||||| | ||||||||||||| |||||||||    
T  16555382 acctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaagac 16555435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 19814152 - 19814229
Alignment:
Q  140 gacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatcta 216  Q
    |||||||||||| |||||| |||  ||||||||||| || | |||| |||||||||||||  |||||||||| |||||    
T  19814152 gacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgagtttaatttcagttgattaccacttcatcta 19814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 2864875 - 2864751
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgcc-gaattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||||| |||||||  |||| |||||   |||||||||| ||||||||||||   | |||||| |||||| |||| | |||||    
T  2864875 tctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgagcttaat 2864776  T
Q  193 ttcagtgaattaccactttatctaa 217  Q
    ||||  |  ||||||||| ||||||    
T  2864775 ttcaaaggtttaccacttcatctaa 2864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 37620677 - 37620745
Alignment:
Q  152 gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| |||||  |||||| | | |||| |||||||||||||| |||||||||| ||| |||||    
T  37620677 gggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatcaaagac 37620745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 7824581 - 7824454
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  7824581 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 7824482  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  7824481 ttcagtggattaccacttcatctaagac 7824454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 29689609 - 29689482
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  29689609 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 29689510  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  29689509 ttcagtggattaccacttcatctaagac 29689482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 54158267 - 54158394
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||| |||||||||||| ||||||||||||||||| |||| ||||| |    
T  54158267 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 54158366  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  54158367 ttcagtggattaccacttcatctaagac 54158394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 9349786 - 9349679
Alignment:
Q  112 aactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccact 209  Q
    |||||| |||||||||| || ||||||| |||||||||| |||||||||||| ||||||||||||||||| |||| ||||| |||||||| |||||||||    
T  9349786 aactggcaaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccact 9349687  T
Q  210 ttatctaa 217  Q
    | ||||||    
T  9349686 tcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 42392932 - 42392805
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||||| |||||| ||| ||||| |||||| |||||||||||| |||| |||| |||||||    
T  42392932 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagtttaat 42392833  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  42392832 ttcagtggtttaccacttcatctaagac 42392805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 43247777 - 43247650
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||||| || || ||||| | ||||| |||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  43247777 tctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgagtttatt 43247678  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  43247677 ttcagtggattaccacttcatctaagac 43247650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 51666052 - 51665925
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||| |||| ||||| | |||||| ||||| |||||||||| |||||||| |||||||| |||| ||||| |    
T  51666052 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtttatt 51665953  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  51665952 ttcagtggattaccacttcatctaagac 51665925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 54151808 - 54151681
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||||||||||||||||| | || ||||| |    
T  54151808 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagtttatt 54151709  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  54151708 ttcagtggattaccacttcatctaagac 54151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 55018161 - 55018044
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||||| |||||| ||||| | || || ||||| | |||||||||||| |||||||||| ||||||||||||||||| |||| ||||| |    
T  55018161 tctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 55018062  T
Q  193 ttcagtgaattaccactt 210  Q
    ||||||| ||||||||||    
T  55018061 ttcagtggattaccactt 55018044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 4601426 - 4601553
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||| ||||| |||||||||| ||| ||||||||||||| |||| ||||| |    
T  4601426 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 4601525  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| ||||||| || |||||||||    
T  4601526 ttcagtggattaccagttcatctaagac 4601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 475374 - 475281
Alignment:
Q  127 aattacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||| ||||||| |||||| ||| |||||||||||| ||| ||||||||||||| |||| |||||| |||||||||||||||||| |||||||||    
T  475374 aattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagtttaa-ttcagtgaattaccacttcatctaagac 475281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 36229104 - 36228994
Alignment:
Q  112 aactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccact 209  Q
    |||||| |||||||||| || ||||| | |||||| ||| |||||||||||| ||||||||||||||||| |||| ||||| ||||| || |||||||||    
T  36229104 aactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggattaccact 36229005  T
Q  210 ttatctaagac 220  Q
    | |||||||||    
T  36229004 tcatctaagac 36228994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 3113105 - 3112995
Alignment:
Q  112 aactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccact 209  Q
    |||||| |||||||||| || ||||| | |||||||| ||| | |||||||| ||||| ||||||||||| |||| ||||| |||||||| |||||||||    
T  3113105 aactggcaaatgccgaaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccact 3113006  T
Q  210 ttatctaagac 220  Q
    | |||||||||    
T  3113005 tcatctaagac 3112995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 38257397 - 38257304
Alignment:
Q  127 aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaaga 219  Q
    |||| ||||||| |||||||||||| |||||||||| | | |||||||| |||| |||| |||||||||||| | |||||||||| ||||||||    
T  38257397 aattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagcggattaccacttcatctaaga 38257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 219
Target Start/End: Complemental strand, 40756855 - 40756728
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacg-tcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaa 191  Q
    |||||||||||||||| |||||  ||||||| || || |||||||||||| || ||| |||| ||||||| || |||||||||||||  |||| ||||||    
T  40756855 tctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacgatcatgatccggattcgaacccgagacctcacagttgcgtgtgagtttaa 40756756  T
Q  192 tttcagtgaattaccactttatctaaga 219  Q
    |||||||   ||||||||| ||||||||    
T  40756755 tttcagtagtttaccacttcatctaaga 40756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 43775224 - 43775351
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||| |||| |||||| |||||| |||||||||| ||  |||||| ||||| |||||  | |||||||  ||| | ||||||||||||| || |||||||    
T  43775224 tctaaaagttctaactcaactggcaaatgccgaaattgtaaggtcggacgttgtgacttgcgttcgaatccggaatctcacagttgtatttgagtttaat 43775323  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  43775324 ttcagtggattaccacttcatctaagac 43775351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 50729525 - 50729652
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||  |||||||||| ||  ||||||||||||||||| | || |||||||| | |||||| ||||| |||||| |||||||    
T  50729525 tctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtttaat 50729624  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||| |  |||||||||| |||||||||    
T  50729625 ttcaatagattaccacttcatctaagac 50729652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 50783324 - 50783197
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccggg-ttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||  |||||||||| ||  ||||||||||||||||| | || |||||||| | |||||| ||||| |||||| |||||||    
T  50783324 tctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagtttaat 50783225  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||| |  |||||||||| |||||||||    
T  50783224 ttcaatagattaccacttcatctaagac 50783197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 195
Target Start/End: Complemental strand, 35461606 - 35461504
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||| ||| || |||||| |||||||||| || ||||||| ||||| |||| |||||||||||| ||| ||||||||||||| |||| ||||| |    
T  35461606 tctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagtttatt 35461507  T
Q  193 ttc 195  Q
    |||    
T  35461506 ttc 35461504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 28844505 - 28844633
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttta-a 191  Q
    ||||||||| ||| || |||||  |||||||||| || ||||| | ||||| |||||| ||||||||||  || ||||||||||||| |||| |||||      
T  28844505 tctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtttatt 28844604  T
Q  192 tttcagtgaattaccactttatctaagac 220  Q
    |||||||| |||||||||| |||||||||    
T  28844605 tttcagtggattaccacttcatctaagac 28844633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 32001551 - 32001424
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || ||||||||||||||||| ||  |||| |  || || ||| || ||||||||| || || ||||||||||| |||| ||||| |    
T  32001551 tctagaagtcctacctcaactggtaaatgccgaaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagtttatt 32001452  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||| ||||||||| || ||||||    
T  32001451 ttcagtgatttaccacttcatataagac 32001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 33334609 - 33334736
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgg-gttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||| | |||||||||| || ||| | | ||||| |||||| | |||||||  ||||||||||||||||| |||| |||||||    
T  33334609 tctagaagtcctagctcaacttgcaaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagtttaat 33334708  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||  |||| ||||| || ||||||    
T  33334709 ttcagtagattatcacttcatataagac 33334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 52500839 - 52500966
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| ||||| |||| ||  |||| | |||||| ||| ||||||||||||  |  ||||||||||||| |||| ||||| |    
T  52500839 tctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagtttatt 52500938  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||  |||||||||| |||||||||    
T  52500939 ttcagtagattaccacttcatctaagac 52500966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 28458664 - 28458790
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgaccgggttcgaacacgggacctcacagttgtatgtgggtttaatt 193  Q
    |||||||||||||||| |||||  ||||| |||| || ||||| |||| ||||||| | |||| |||| | | ||||||||||||  |||  |||||| |    
T  28458664 tctagaagtcctaactcaactgacaaatgtcgaaattgcaaggccagatgtcgtgatccggtttgaacccagaacctcacagttgcgtgtaagtttaact 28458763  T
Q  194 tcagtgaattaccactttatctaagac 220  Q
    ||| | ||||||||||| |||||||||    
T  28458764 tcaataaattaccacttcatctaagac 28458790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 7958627 - 7958694
Alignment:
Q  150 ccgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaa 217  Q
    |||||||||||| ||||||||||||||| | |||  ||||| ||| |||| |||||||||| ||||||    
T  7958627 ccgggttcgaacccgggacctcacagttatgtgtaagtttatttttagtggattaccacttcatctaa 7958694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 47635132 - 47635005
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccg-aattacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    |||||||||||||| | |||||||||||   | |||| ||||||| ||| | |||||| |||||||||  | ||||||| ||||| | |||  |||||||    
T  47635132 tctagaagtcctaattcaactggtaaattttggaattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatgtgtaagtttaat 47635033  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||  |||||||||| |||||||||    
T  47635032 ttcagttgattaccacttcatctaagac 47635005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 27230744 - 27230794
Alignment:
Q  170 tcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||| ||||  |||||||||||||||||||||||| |||| ||||    
T  27230744 tcacagttgtgtgtgaatttaatttcagtgaattaccacttcatctcagac 27230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 448930 - 448885
Alignment:
Q  165 ggacctcacagttgtatgtgggtttaatttcagtgaattaccactt 210  Q
    ||||||||||||||| |||| ||||||||| |||| ||||||||||    
T  448930 ggacctcacagttgtttgtgagtttaattttagtggattaccactt 448885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 1778852 - 1778977
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||  |||||||||| || ||||| | ||| | |||||| |||||||||| ||| |||||||| |||| | ||  |||| |    
T  1778852 tctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgtttgaatttatt 1778951  T
Q  193 ttcagtgaattaccactttatctaag 218  Q
    |||| || |||||||||| |||||||    
T  1778952 ttcaatggattaccacttcatctaag 1778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 14078 - 13951
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||| ||||| || ||||| | ||||| |||| |||||||||||| ||||||||||||||||| |||| ||||| |    
T  14078 tctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 13979  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  13978 ttcagtggattaccacttcatctaagac 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 19758 - 19631
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||| ||||| || ||||| | ||||| |||| |||||||||||| ||||||||||||||||| |||| ||||| |    
T  19758 tctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttatt 19659  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  19658 ttcagtggattaccacttcatctaagac 19631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 10100 - 9973
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| || ||||| | |||||||| ||| |||||||||| |||||||||| |||||| |||| ||||| |    
T  10100 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtttatt 10001  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    ||||||| |||||||||| |||||||||    
T  10000 ttcagtggattaccacttcatctaagac 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 114253 - 114380
Alignment:
Q  95 tctagaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtga-ccgggttcgaacacgggacctcacagttgtatgtgggtttaat 192  Q
    ||||||||||||| || |||||| |||||||||| ||  |||| | |||||| ||| |||||||||||| |||||||||||| |||| |||| ||||| |    
T  114253 tctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagtttagt 114352  T
Q  193 ttcagtgaattaccactttatctaagac 220  Q
    |||||||  ||||||||| |||||||||    
T  114353 ttcagtggtttaccacttcatctaagac 114380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 34822 - 34947
Alignment:
Q  98 agaagtcctaacttaactggtaaatgccgaa-ttacaaggtcagacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggttt-aattt 194  Q
    |||||||||| || |||||| |||||||||| || ||||| | |||||||||||  |||||||||  | ||||||| |||||||||||| |||| |||||    
T  34822 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagttttaattt 34921  T
Q  195 cagtgaattaccactttatctaagac 220  Q
    ||||| |||||||||| |||||||||    
T  34922 cagtggattaccacttcatctaagac 34947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 22210 - 22291
Alignment:
Q  140 gacgtcgtgacc-gggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||| |||||||| | ||||||||||||||||  |||| |||||||||||||| |||||||||| |||||||||    
T  22210 gacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggattaccacttcatctaagac 22291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 9012 - 8943
Alignment:
Q  151 cgggttcgaacacgggacctcacagttgtatgtgggtttaatttcagtgaattaccactttatctaagac 220  Q
    |||||||||||   ||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||    
T  9012 cgggttcgaacctaggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcatctaagac 8943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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