View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12055_low_10 (Length: 751)

Name: NF12055_low_10
Description: NF12055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12055_low_10
NF12055_low_10
[»] chr8 (43 HSPs)
chr8 (1-740)||(10069527-10070261)
chr8 (145-411)||(33892036-33892294)
chr8 (149-411)||(6906264-6906527)
chr8 (147-267)||(9861568-9861688)
chr8 (169-411)||(8791732-8791963)
chr8 (147-275)||(31212313-31212441)
chr8 (143-259)||(33892032-33892148)
chr8 (141-260)||(15229610-15229729)
chr8 (145-244)||(31212443-31212542)
chr8 (145-259)||(6906262-6906375)
chr8 (141-267)||(5879869-5879994)
chr8 (144-259)||(14148393-14148507)
chr8 (134-257)||(8791853-8791976)
chr8 (261-413)||(9861566-9861710)
chr8 (144-255)||(29242429-29242539)
chr8 (307-411)||(10070011-10070115)
chr8 (150-260)||(1047259-1047369)
chr8 (147-251)||(10069851-10069955)
chr8 (307-411)||(29242432-29242535)
chr8 (322-410)||(39484723-39484810)
chr8 (172-261)||(14148828-14148916)
chr8 (317-409)||(6906435-6906527)
chr8 (322-414)||(31212310-31212402)
chr8 (322-385)||(36874336-36874399)
chr8 (317-411)||(31212446-31212540)
chr8 (314-411)||(15229616-15229713)
chr8 (317-386)||(33892198-33892267)
chr8 (307-387)||(8791734-8791814)
chr8 (307-411)||(37037256-37037358)
chr8 (319-386)||(7765976-7766042)
chr8 (317-411)||(29242834-29242927)
chr8 (173-267)||(36874336-36874430)
chr8 (145-255)||(37037252-37037360)
chr8 (335-404)||(14148403-14148472)
chr8 (172-253)||(27503640-27503721)
chr8 (307-411)||(5879875-5879978)
chr8 (142-245)||(39484714-39484816)
chr8 (167-228)||(7766359-7766420)
chr8 (317-386)||(14148848-14148916)
chr8 (146-255)||(29242820-29242928)
chr8 (146-217)||(20691273-20691343)
chr8 (322-404)||(1047263-1047345)
chr8 (341-411)||(20691274-20691343)
[»] chr1 (42 HSPs)
chr1 (145-392)||(16706354-16706596)
chr1 (147-387)||(30748951-30749172)
chr1 (147-387)||(30770402-30770623)
chr1 (145-411)||(16706333-16706594)
chr1 (152-267)||(13765561-13765676)
chr1 (145-259)||(14760018-14760131)
chr1 (146-256)||(32800271-32800381)
chr1 (208-359)||(51941930-51942072)
chr1 (145-267)||(22679335-22679457)
chr1 (140-264)||(15393294-15393417)
chr1 (144-262)||(22679467-22679585)
chr1 (144-414)||(30748948-30749199)
chr1 (144-414)||(30770399-30770650)
chr1 (147-297)||(23485670-23485822)
chr1 (307-411)||(14760026-14760129)
chr1 (317-409)||(22679488-22679580)
chr1 (147-262)||(30746773-30746887)
chr1 (147-262)||(30768224-30768338)
chr1 (147-258)||(15393145-15393256)
chr1 (202-267)||(51942004-51942069)
chr1 (318-404)||(20171396-20171480)
chr1 (314-404)||(32800283-32800373)
chr1 (171-241)||(21537616-21537686)
chr1 (318-411)||(35294333-35294426)
chr1 (317-413)||(15393317-15393412)
chr1 (144-267)||(30746897-30747019)
chr1 (144-267)||(30768348-30768470)
chr1 (351-411)||(14759953-14760012)
chr1 (329-412)||(15393144-15393227)
chr1 (317-404)||(13765563-13765650)
chr1 (317-387)||(21537616-21537686)
chr1 (203-264)||(8819331-8819391)
chr1 (322-411)||(22679337-22679426)
chr1 (149-218)||(23528233-23528302)
chr1 (144-188)||(35215030-35215074)
chr1 (146-258)||(35294332-35294444)
chr1 (341-411)||(39255614-39255684)
chr1 (350-395)||(10556039-10556084)
chr1 (150-267)||(23485808-23485925)
chr1 (347-404)||(23485864-23485921)
chr1 (322-387)||(39255475-39255539)
chr1 (145-194)||(39785218-39785267)
[»] chr5 (38 HSPs)
chr5 (140-410)||(25905959-25906220)
chr5 (149-409)||(22297764-22298016)
chr5 (151-411)||(17047859-17048110)
chr5 (146-404)||(13657556-13657806)
chr5 (149-409)||(22297764-22298016)
chr5 (143-267)||(6843078-6843202)
chr5 (148-267)||(25905959-25906078)
chr5 (191-299)||(11929390-11929496)
chr5 (140-261)||(29673284-29673404)
chr5 (142-267)||(2344600-2344725)
chr5 (146-267)||(17047991-17048111)
chr5 (322-411)||(29673291-29673379)
chr5 (313-413)||(2344622-2344722)
chr5 (142-257)||(13657544-13657659)
chr5 (146-261)||(24490693-24490807)
chr5 (317-404)||(29673700-29673787)
chr5 (142-267)||(20510431-20510556)
chr5 (146-255)||(38900222-38900330)
chr5 (175-255)||(8086685-8086765)
chr5 (319-411)||(24490694-24490785)
chr5 (146-261)||(38298693-38298808)
chr5 (331-411)||(3935965-3936045)
chr5 (307-411)||(6843082-6843186)
chr5 (171-255)||(15773715-15773799)
chr5 (147-202)||(2846573-2846628)
chr5 (147-230)||(38299117-38299200)
chr5 (363-413)||(2846571-2846621)
chr5 (143-261)||(5161045-5161161)
chr5 (317-411)||(25906120-25906213)
chr5 (148-201)||(2858411-2858464)
chr5 (150-243)||(29673698-29673791)
chr5 (307-383)||(8086689-8086765)
chr5 (363-410)||(2858411-2858458)
chr5 (136-227)||(3935954-3936045)
chr5 (168-230)||(20510358-20510420)
chr5 (334-387)||(12272526-12272579)
chr5 (318-395)||(37978617-37978694)
chr5 (322-411)||(38298694-38298783)
[»] chr2 (53 HSPs)
chr2 (150-410)||(980920-981169)
chr2 (149-411)||(12874680-12874934)
chr2 (149-299)||(16127920-16128070)
chr2 (143-299)||(4921267-4921423)
chr2 (149-299)||(16126222-16126372)
chr2 (149-299)||(16333253-16333403)
chr2 (168-386)||(35926745-35926955)
chr2 (146-267)||(37897574-37897695)
chr2 (150-257)||(27847860-27847967)
chr2 (145-258)||(18509495-18509608)
chr2 (145-413)||(32945610-32945868)
chr2 (172-257)||(40152723-40152808)
chr2 (318-411)||(18509497-18509590)
chr2 (142-255)||(32945607-32945719)
chr2 (137-414)||(980909-981175)
chr2 (136-385)||(12874669-12874910)
chr2 (142-237)||(7328464-7328558)
chr2 (147-370)||(25330560-25330769)
chr2 (174-409)||(16127920-16128146)
chr2 (146-267)||(39159231-39159350)
chr2 (190-267)||(25330690-25330767)
chr2 (318-414)||(20972385-20972481)
chr2 (141-260)||(43130286-43130404)
chr2 (172-267)||(7328357-7328453)
chr2 (307-387)||(37897599-37897679)
chr2 (148-228)||(37897727-37897807)
chr2 (151-257)||(16126366-16126471)
chr2 (145-245)||(16192570-16192671)
chr2 (318-411)||(43130306-43130398)
chr2 (307-411)||(4921315-4921419)
chr2 (171-255)||(26403030-26403114)
chr2 (330-410)||(37897727-37897807)
chr2 (172-267)||(35926860-35926955)
chr2 (151-257)||(16333154-16333259)
chr2 (141-259)||(30714117-30714233)
chr2 (147-240)||(20972385-20972478)
chr2 (320-413)||(27847855-27847948)
chr2 (331-404)||(39786493-39786565)
chr2 (350-412)||(25330559-25330621)
chr2 (146-267)||(32483645-32483766)
chr2 (321-413)||(7328464-7328555)
chr2 (185-261)||(8185259-8185335)
chr2 (317-409)||(16333311-16333403)
chr2 (322-386)||(27847999-27848063)
chr2 (317-411)||(7328333-7328427)
chr2 (172-257)||(39751274-39751358)
chr2 (170-232)||(4921192-4921254)
chr2 (322-400)||(35926736-35926813)
chr2 (326-387)||(4921193-4921254)
chr2 (220-261)||(17368841-17368882)
chr2 (160-225)||(24225551-24225616)
chr2 (142-227)||(39786311-39786396)
chr2 (150-227)||(39786493-39786569)
[»] chr6 (27 HSPs)
chr6 (139-411)||(31298724-31298988)
chr6 (142-409)||(13340445-13340704)
chr6 (142-299)||(34637528-34637685)
chr6 (149-267)||(13340445-13340563)
chr6 (148-261)||(24704308-24704421)
chr6 (146-267)||(12289979-12290100)
chr6 (147-267)||(34637425-34637544)
chr6 (307-413)||(30519679-30519784)
chr6 (148-261)||(7359562-7359674)
chr6 (324-404)||(14365097-14365176)
chr6 (171-259)||(30519704-30519792)
chr6 (145-224)||(403305-403383)
chr6 (168-258)||(24704727-24704817)
chr6 (165-264)||(2401826-2401925)
chr6 (318-404)||(24704314-24704400)
chr6 (317-411)||(31298886-31298980)
chr6 (317-411)||(34637586-34637680)
chr6 (322-411)||(12290136-12290224)
chr6 (145-267)||(31298722-31298844)
chr6 (144-267)||(10284213-10284333)
chr6 (334-411)||(403307-403383)
chr6 (329-410)||(7359593-7359674)
chr6 (322-411)||(13340610-13340699)
chr6 (143-227)||(6190565-6190648)
chr6 (141-259)||(12290113-12290230)
chr6 (322-412)||(34637424-34637513)
chr6 (342-383)||(19045077-19045118)
[»] chr4 (32 HSPs)
chr4 (139-411)||(54164458-54164722)
chr4 (147-411)||(28687461-28687716)
chr4 (140-410)||(13552662-13552917)
chr4 (145-267)||(54164602-54164724)
chr4 (146-299)||(7513526-7513679)
chr4 (148-244)||(13552821-13552917)
chr4 (172-286)||(34665095-34665209)
chr4 (318-413)||(32186630-32186724)
chr4 (171-261)||(17431102-17431192)
chr4 (147-260)||(32186611-32186722)
chr4 (307-403)||(17431112-17431208)
chr4 (149-259)||(32185283-32185391)
chr4 (172-259)||(33752327-33752412)
chr4 (317-411)||(7513527-7513621)
chr4 (334-412)||(17430712-17430790)
chr4 (171-261)||(17615621-17615710)
chr4 (317-386)||(28687623-28687692)
chr4 (317-401)||(32185291-32185373)
chr4 (148-267)||(16854763-16854882)
chr4 (172-267)||(28687486-28687581)
chr4 (145-263)||(33752675-33752791)
chr4 (170-236)||(34665003-34665069)
chr4 (317-411)||(54164466-54164560)
chr4 (142-255)||(30941471-30941583)
chr4 (147-258)||(17430713-17430824)
chr4 (325-411)||(34665148-34665234)
chr4 (319-409)||(53343707-53343796)
chr4 (318-410)||(17250463-17250556)
chr4 (172-228)||(31078953-31079008)
chr4 (174-261)||(17615971-17616058)
chr4 (202-267)||(7513663-7513726)
chr4 (350-395)||(2514310-2514355)
[»] chr7 (47 HSPs)
chr7 (150-413)||(31198302-31198555)
chr7 (144-411)||(19105256-19105513)
chr7 (173-404)||(31172202-31172424)
chr7 (140-410)||(9686285-9686540)
chr7 (142-267)||(31198434-31198558)
chr7 (143-271)||(6036544-6036672)
chr7 (192-414)||(8129876-8130089)
chr7 (149-299)||(21657401-21657553)
chr7 (144-411)||(7760608-7760856)
chr7 (147-261)||(12821179-12821292)
chr7 (147-261)||(29635235-29635348)
chr7 (146-267)||(7760607-7760728)
chr7 (148-244)||(9686444-9686540)
chr7 (318-414)||(12821176-12821272)
chr7 (142-241)||(3555360-3555458)
chr7 (145-411)||(19105254-19105510)
chr7 (145-267)||(31172311-31172433)
chr7 (143-259)||(15329853-15329970)
chr7 (147-259)||(37081239-37081349)
chr7 (316-411)||(3555365-3555459)
chr7 (317-412)||(29635234-29635328)
chr7 (149-255)||(20164989-20165095)
chr7 (307-404)||(7760749-7760846)
chr7 (313-387)||(23797202-23797276)
chr7 (148-261)||(20164620-20164733)
chr7 (142-267)||(21657292-21657417)
chr7 (146-259)||(35303853-35303966)
chr7 (307-409)||(20164993-20165095)
chr7 (149-267)||(23797180-23797298)
chr7 (170-261)||(29635645-29635736)
chr7 (317-404)||(31198306-31198392)
chr7 (318-412)||(37081257-37081350)
chr7 (334-403)||(47741036-47741105)
chr7 (313-411)||(35054445-35054543)
chr7 (317-410)||(20164620-20164713)
chr7 (317-409)||(6036550-6036642)
chr7 (322-413)||(15330014-15330105)
chr7 (168-259)||(35304194-35304285)
chr7 (141-259)||(15329991-15330109)
chr7 (143-236)||(35054441-35054534)
chr7 (322-411)||(35303854-35303943)
chr7 (162-278)||(8104649-8104765)
chr7 (317-409)||(21657461-21657553)
chr7 (317-395)||(2850646-2850724)
chr7 (142-224)||(47741036-47741118)
chr7 (145-223)||(18881110-18881190)
chr7 (318-387)||(29635666-29635735)
[»] scaffold0025 (2 HSPs)
scaffold0025 (146-299)||(63929-64082)
scaffold0025 (146-411)||(63826-64081)
[»] chr3 (42 HSPs)
chr3 (146-411)||(4304143-4304404)
chr3 (150-387)||(4475108-4475335)
chr3 (142-267)||(4304138-4304263)
chr3 (148-257)||(30173598-30173707)
chr3 (146-289)||(32618900-32619043)
chr3 (318-410)||(30430271-30430363)
chr3 (141-259)||(45405045-45405162)
chr3 (145-258)||(30172069-30172181)
chr3 (148-240)||(30430271-30430363)
chr3 (146-258)||(28725656-28725770)
chr3 (318-409)||(2928096-2928187)
chr3 (145-260)||(6931083-6931198)
chr3 (149-259)||(2928096-2928206)
chr3 (143-257)||(4475249-4475363)
chr3 (145-255)||(43907867-43907976)
chr3 (314-387)||(44094175-44094249)
chr3 (185-258)||(10821868-10821941)
chr3 (317-411)||(6931102-6931196)
chr3 (314-387)||(34502626-34502699)
chr3 (332-411)||(30172071-30172150)
chr3 (226-377)||(10821864-10822007)
chr3 (170-267)||(44094174-44094272)
chr3 (154-259)||(44094286-44094391)
chr3 (172-261)||(8896009-8896098)
chr3 (307-404)||(44094294-44094391)
chr3 (347-411)||(4304339-4304403)
chr3 (141-217)||(27614008-27614084)
chr3 (307-387)||(30173604-30173684)
chr3 (317-411)||(32618948-32619042)
chr3 (164-238)||(34502619-34502693)
chr3 (322-404)||(41993143-41993225)
chr3 (172-261)||(41993118-41993207)
chr3 (150-198)||(30430672-30430720)
chr3 (347-413)||(25799514-25799579)
chr3 (322-411)||(28725678-28725769)
chr3 (190-255)||(29491413-29491476)
chr3 (202-240)||(34396901-34396939)
chr3 (317-411)||(43907881-43907974)
chr3 (347-404)||(4475112-4475169)
chr3 (172-245)||(11096011-11096084)
chr3 (363-404)||(30430675-30430716)
chr3 (343-396)||(35547198-35547251)
[»] scaffold0328 (3 HSPs)
scaffold0328 (172-267)||(11586-11683)
scaffold0328 (146-275)||(11009-11137)
scaffold0328 (326-413)||(11623-11710)
[»] scaffold0009 (1 HSPs)
scaffold0009 (140-226)||(26994-27080)
[»] scaffold0042 (2 HSPs)
scaffold0042 (160-261)||(30700-30800)
scaffold0042 (146-258)||(30310-30421)
[»] scaffold0577 (1 HSPs)
scaffold0577 (187-258)||(1647-1718)
[»] scaffold0129 (2 HSPs)
scaffold0129 (172-230)||(6296-6354)
scaffold0129 (328-386)||(6296-6354)
[»] scaffold0063 (1 HSPs)
scaffold0063 (350-395)||(52092-52137)


Alignment Details
Target: chr8 (Bit Score: 609; Significance: 0; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 609; E-Value: 0
Query Start/End: Original strand, 1 - 740
Target Start/End: Complemental strand, 10070261 - 10069527
Alignment:
Q  1 cggtggaaacaacaaatcaatatgttagcagatgacccacaaatcttggataacctttgacctaactgaccttacaaaaccaaccggtaaggtgaagatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  10070261 cggtggaaacaacaaatcaatatgttagcagatgacccacaaattttggataacctttgacctaactaaccttacaaaaccaaccggggaggtgaagatc 10070162  T
Q  101 atactcactcataaaacaatgttgagaattaaatataaatattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcct 200  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  10070161 acactcactcataaaccaatgttgagaattaaatataaatattttagggttaaataagcaaatagttcccctaaatataccaatattttattttaatcct 10070062  T
Q  201 cctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatta 300  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10070061 cctaaaatattttttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatta 10069962  T
Q  301 attgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttac 400  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  10069961 attgaattcatagatgaaaaattttagaaggaccaaaatcctaaagaatattttagaggggttaaaattaaatgttggtacatttagtgggaacatttac 10069862  T
Q  401 ttatgtaacccaatcaatgctttctaagtttatatgaacatcaaatatatatataccaactgatgctttctaaatttatataataacatcaaaagtaaat 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10069861 ttatgtaacccaatcaatgctttctaagtttatatgaacatcaaatata--tataccaattgatgctttctaaatttatataataacatcaaaagtaaat 10069764  T
Q  501 aaatggagagagcattttattttgcatgtaaatgagcaaacaacgatttatttgtcgtgtannnnnnnactcactgacataagactatcatcacactgtc 600  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||    
T  10069763 aaatggagagagcattttattttgcatgtaaatgagcaaacaatgatttatttgtcgtgtacc------ctcactgacataagactatcatcacactgtc 10069670  T
Q  601 tacgtcatttatgctctttccctttc---tcttcttcttctaatactcacatcaacaagtaaccatagaaactctttcttaacaatgttgcatgcaacat 697  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10069669 tacgtcatttacgctctttccctttctcttcttcttcttctaatactcacatcaacaagtaaccatagaaactctttcttaacaatgttgcatgcaacat 10069570  T
Q  698 attctttacttttatgagttttaaactcttcgtctctctgctt 740  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10069569 attctttacttttatgagttttaaactcttcgtctctctgctt 10069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 145 - 411
Target Start/End: Complemental strand, 33892294 - 33892036
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| ||| | ||  | |||||||||||| |||| ||||||||||   |||||||||||||| |||||||||||||||||||||||||||    
T  33892294 tagggttaaataagtaaacaatcttcttaaatataccaacatttgattttagtccctttaaaatattctttatgtttttggtccctctaaaatttttcat 33892195  T
Q  245 ctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaa 344  Q
     ||||||||||||||||| |||||| ||||||||||||||||| || |||||||        ||||| ||| |||| ||||||| ||||||||| |||||    
T  33892194 ttatgaaattagtccctgatctagtctaatactcaatgtagagtatggactaat--------ttcatagatgaaaatttttagaaggaccaaaaacctaa 33892103  T
Q  345 gaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
      ||||||||   |||| |||||| |||||||||||||||||   | || |||||||||| ||||||    
T  33892102 agaatattttgaggggactaaaatcaaatgttggtatatttaagagaactatttacttatttaaccc 33892036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 149 - 411
Target Start/End: Complemental strand, 6906527 - 6906264
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| |||  ||||||||||||||||||| |||| |||||||||| | ||||||||| |||||| ||||| |||||| |||| |||||||| ||    
T  6906527 gttaaataagtaaacggtccccctaaatataccaacatttgattttagtccccataaaatattttttaggcttttgatccctccaaaaattttcatccat 6906428  T
Q  249 gaaattagtccctgct----------ctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaa 338  Q
     |||||||||||||||           |||||||||||||||||||||| || |||||||        ||||| ||| ||||||||| || |||||||||    
T  6906427 taaattagtccctgctgttaaaaaaaatagtgtaatactcaatgtagagtatggactaat--------ttcatggatgaaaaattttggaaggaccaaaa 6906336  T
Q  339 tcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
     |||||| |||||||||  |||| | |||| |||||||||||||||||| ||||| |||||||||| ||||||    
T  6906335 gcctaaggaatattttatggggact-aaatcaaatgttggtatatttagggggactatttacttatttaaccc 6906264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 9861568 - 9861688
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| ||||||||| |||||||||| ||| |||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||||| |    
T  9861568 gggttaaataagtaaatagtcctcctaaatatatcaacatttgattttagtccctataaaatattctttaggcttttggtccctctaaaatttttcattt 9861667  T
Q  247 atgaaattagtccctgctcta 267  Q
    |||||||||||||||||||||    
T  9861668 atgaaattagtccctgctcta 9861688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 169 - 411
Target Start/End: Original strand, 8791732 - 8791963
Alignment:
Q  169 ccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctag 268  Q
    ||||||||||| ||| |||| |||||| ||  || ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  8791732 ccctaaatatatcaacatttgattttactcaccccaaaatatttgttaggtttttggtccctctaaaatttttcatctatgaaattagtctctgctcgag 8791831  T
Q  269 tgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaat 368  Q
    ||||||||| |||||||| ||   ||||||        ||||| ||||||||| | ||||||||  |||| ||||||||||||||||   ||||||||||    
T  8791832 tgtaatactaaatgtagaaca---actaat--------ttcatagataaaaaaatgtagagggataaaaaacctaagaaatattttatgaggattaaaat 8791920  T
Q  369 taaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
     ||||||| |||||||||   | || |||||||||| ||||||    
T  8791921 caaatgttagtatatttaagagaactatttacttatttaaccc 8791963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 147 - 275
Target Start/End: Original strand, 31212313 - 31212441
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| ||||||||||| |||||||| ||| |||| |||||||||| | |||||||||||||||| |||||||||||||||||  ||  || |    
T  31212313 gggttaaataagtaaatagtccccttaaatatatcaacatttgattttagtccccataaaatattctttaggcttttggtccctctaaaaaattctattt 31212412  T
Q  247 atgaaattagtccctgctctagtgtaata 275  Q
    |||||||||||| ||||||||||||||||    
T  31212413 atgaaattagtctctgctctagtgtaata 31212441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 33892032 - 33892148
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    |||||||||||||||| ||||||| | | |||||||||||| |||| |||||||||| |  ||||||||||||||||||||||||| ||||||| |||||    
T  33892032 tttagggttaaataagtaaatagttctcttaaatataccaacatttgattttagtcccctcaaaatattctttaggtttttggtccttctaaaaattttc 33892131  T
Q  243 atctatgaaattagtcc 259  Q
    |||||||||||||||||    
T  33892132 atctatgaaattagtcc 33892148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 15229610 - 15229729
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    |||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||||||   ||||||||||||| |  ||||| |||||||||||||||    
T  15229610 attttagggttaaataagtaaatagttcccttaaatataccaacattttattttagtccctataaaatattcttttgacttttgatccctctaaaatttt 15229709  T
Q  241 tcatctatgaaattagtccc 260  Q
    | || |||||||||||||||    
T  15229710 ttatttatgaaattagtccc 15229729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 31212542 - 31212443
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||||||| ||||||||||||||| |||| |||||||||| | |||||||||||||||||||||| | |||||||||||||||||    
T  31212542 tagggttaaataagtaaatagtctccctaaatataccaacatttgattttagtccccataaaatattctttaggtttttgtttcctctaaaatttttcat 31212443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 6906262 - 6906375
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||| ||||| | |||||||||| ||||| ||||||||| || ||||||||||||    
T  6906262 tagggttaaataagtaaatagtccccctaaatataccaacatttgattt-agtccccataaaatattccttaggcttttggtccttccaaaatttttcat 6906360  T
Q  245 ctatgaaattagtcc 259  Q
    | |||||||||||||    
T  6906361 ccatgaaattagtcc 6906375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 5879869 - 5879994
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||||| ||||||||| | ||||||||||  ||| |  |||||||||||||| |||||    
T  5879869 attttagggttaaataagtaaatagtctccctaaatatactaatatttgattttagtctttctaaaatatttcttaag-ctttggtccctctaacatttt 5879967  T
Q  241 tcatctatgaaattagtccctgctcta 267  Q
    ||||| |||||||||||| || |||||    
T  5879968 tcatccatgaaattagtctctactcta 5879994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 144 - 259
Target Start/End: Original strand, 14148393 - 14148507
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    |||||||| |||||| || | ||||||||||||||| ||| |||| ||||||||||||||||||||||  |||||||||| || || |||||| ||||||    
T  14148393 ttagggtttaataagtaagtggtccccctaaatatatcaacatttgattttagtcctcctaaaatatttcttaggtttttagttcc-ctaaaaattttca 14148491  T
Q  244 tctatgaaattagtcc 259  Q
    ||||||||||||||||    
T  14148492 tctatgaaattagtcc 14148507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 8791976 - 8791853
Alignment:
Q  134 tataaatattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctcta 233  Q
    |||| |||||||||||||||||||| ||||||| | | ||||||||| || |||| |||||| ||||| |||||||||  ||||||||||  ||||||||    
T  8791976 tatatatattttagggttaaataagtaaatagttctcttaaatatactaacatttgattttaatcctcataaaatatttcttaggttttttatccctcta 8791877  T
Q  234 aaatttttcatctatgaaattagt 257  Q
     | ||||| |||||||||||||||    
T  8791876 catttttttatctatgaaattagt 8791853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 261 - 413
Target Start/End: Complemental strand, 9861710 - 9861566
Alignment:
Q  261 tgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagaggg 360  Q
    ||||||||||||||||| |||||||||||  ||||||||        ||||  || |||||||||||||||||||||| |||||  ||||||||| ||||    
T  9861710 tgctctagtgtaatacttaatgtagagcagggactaatt--------tcataaatgaaaaattttagagggaccaaaagcctaaagaatattttataggg 9861619  T
Q  361 attaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    | |||||| |||||||| |||||||||  |||| |||||||||| ||||||||    
T  9861618 actaaaatcaaatgttgatatatttaggaggactatttacttatttaacccaa 9861566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 29242429 - 29242539
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||||| || | ||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||| ||||||| ||||||||| |||| |    
T  29242429 ttagggttaaataagtaacttgtccctctaaa-ataccaacattttattttagtccctctaaaatattcattaggcttttggttcctctaaaagttttta 29242527  T
Q  244 tctatgaaatta 255  Q
    ||||||||||||    
T  29242528 tctatgaaatta 29242539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 307 - 411
Target Start/End: Original strand, 10070011 - 10070115
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||||||||  |||||||||| |||| ||||||||||||| || || |||| ||||| |    
T  10070011 ttcatagatgaaaaattttagagggaccaaaaacctaaaaaatattttaggaggattaaaataaaatattggtatatttaggggaactatttgcttattt 10070110  T
Q  407 aaccc 411  Q
    |||||    
T  10070111 aaccc 10070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 1047259 - 1047369
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatg 249  Q
    ||||||||| |||| |||  ||||||||||| |||||||||||||| ||||||||||| |||| ||||  |||||||||||| ||||  ||||||| |||    
T  1047259 ttaaataagtaaatggtcttcctaaatatactaatattttattttaatcctcctaaaacattccttagacttttggtccctcaaaaaaatttcatccatg 1047358  T
Q  250 aaattagtccc 260  Q
    ||||| |||||    
T  1047359 aaattggtccc 1047369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 10069851 - 10069955
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||| ||||| ||||  |||| |||||| |||||| |||| ||||||  ||  ||||||||||||||||| ||||||||| |||||||||||||||||    
T  10069851 gggttacataagtaaatgttcccactaaatgtaccaacatttaattttaacccctctaaaatattctttaggattttggtccttctaaaatttttcatct 10069950  T
Q  247 atgaa 251  Q
    |||||    
T  10069951 atgaa 10069955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 411
Target Start/End: Complemental strand, 29242535 - 29242432
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| |||||||| ||||||||| ||||||| |||||  ||||||||||||||| |||||| |||||||||||| ||||| ||||| | |||||||| |    
T  29242535 ttcatagataaaaacttttagaggaaccaaaagcctaatgaatattttagagggactaaaataaaatgttggtat-tttagagggacaagttacttattt 29242437  T
Q  407 aaccc 411  Q
    |||||    
T  29242436 aaccc 29242432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 39484723 - 39484810
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||  |||||||| ||||||||| || ||||||||||||| |||||    
T  39484723 ttttggagggaccaaaatcctaagaaatattttagggagattaaaa-aaaatgttgatatatttaggggaaccatttacttatttaacc 39484810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 14148916 - 14148828
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||||||||||| |||| |||||||||| ||||| ||||| |||||| ||||||| |||| |||||||||||| ||||||||||| ||||    
T  14148916 taaatataccaacatttgattttagtccccctaacatattttttaggcttttggt-cctccaaaatttttcatatatgaaattagaccct 14148828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 409
Target Start/End: Original strand, 6906435 - 6906527
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    |||| |||| |||||| ||||| ||||| ||||||||||  |||| |||||| |||||||||||||||||| |||||| ||||||||| ||||    
T  6906435 aaaatttttggagggatcaaaagcctaaaaaatattttatggggactaaaatcaaatgttggtatatttagggggaccgtttacttatttaac 6906527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 31212402 - 31212310
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaat 414  Q
    ||||||||||||||||| |||||  |||||||||  |||| |||||| |||||||| ||||||||  ||||| |||||||||| |||||||||    
T  31212402 ttttagagggaccaaaagcctaaagaatattttatggggactaaaatcaaatgttgatatatttaaggggactatttacttatttaacccaat 31212310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 36874399 - 36874336
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattt 385  Q
    ||||||||||||||||| |||||| ||||||||||||| | |||||||||||||||| ||||||    
T  36874399 ttttagagggaccaaaaacctaaggaatattttagaggaactaaaattaaatgttggcatattt 36874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 31212446 - 31212540
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||||| | ||||| |||||  |||||||||  |||| |||||| |||||||||||||||||| | ||| |||||||||| ||||||    
T  31212446 aaaaattttagaggaaacaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggagactatttacttatttaaccc 31212540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 15229713 - 15229616
Alignment:
Q  314 ataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||||||||| |||||  | ||  ||||||||| ||||| |||||| |||||||||||||||||  || || |||||||||| ||||||    
T  15229713 ataaaaaattttagagggatcaaaagtcaaaagaatattttatagggactaaaataaaatgttggtatatttaagggaactatttacttatttaaccc 15229616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 33892198 - 33892267
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattta 386  Q
    |||||||||||||||||||||| | |||  ||||||||| ||||| |||||| |||||||||||||||||    
T  33892198 aaaaattttagagggaccaaaaacataaagaatattttaaagggactaaaatcaaatgttggtatattta 33892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 8791814 - 8791734
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||| ||| |||||||||||||||||||||| ||||| ||||||||| | | || |||||| |||||||| |||||||||    
T  8791814 ttcatagatgaaaaattttagagggaccaaaaacctaacaaatattttggggtgagtaaaatcaaatgttgatatatttag 8791734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 411
Target Start/End: Original strand, 37037256 - 37037358
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| |||||||||| |||||||||||   |||| ||||||||||||||| |||||| ||||||||| ||||||||   |||||||||||||| |    
T  37037256 ttcatggatgaaaaatttta-agggaccaaaagtataaggaatattttagagggactaaaatcaaatgttggaatatttag-aagaccatttacttattt 37037353  T
Q  407 aaccc 411  Q
    |||||    
T  37037354 aaccc 37037358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 386
Target Start/End: Complemental strand, 7766042 - 7765976
Alignment:
Q  319 aaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattta 386  Q
    |||||||||||  | ||||||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  7766042 aaattttagagaaatcaaaatcctaagaaatattttag-ggggctaaaattaaatgttggtatattta 7765976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 29242834 - 29242927
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||| |||| |||||||| ||| |||||||||| ||||||||||| |||||| |||||||| ||  ||||| ||||| |||||||||| ||||||    
T  29242834 aaaatttttggagggaccgaaaacctaagaaattttttagagggactaaaatcaaatgttgataattttag-gggacaatttacttatttaaccc 29242927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 36874336 - 36874430
Alignment:
Q  173 aaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    |||||| |||| |||| |||||||| |  ||||||||||| |||||||||||||||||||||||  | | || ||||||||||||| || |||||    
T  36874336 aaatatgccaacatttaattttagttcctctaaaatattccttaggtttttggtccctctaaaaaatgttatttatgaaattagtctctactcta 36874430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 37037360 - 37037252
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||| |||  | ||||||| |||| |||| ||||||||||  ||||||||||| |||   ||||||||||| |||||||||||||    
T  37037360 tagggttaaataagtaaatggtcttc-taaatattccaacatttgattttagtccctctaaaatattccttatacttttggtccct-taaaatttttcat 37037263  T
Q  245 ctatgaaatta 255  Q
    | |||||||||    
T  37037262 ccatgaaatta 37037252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 14148472 - 14148403
Alignment:
Q  335 aaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||| |||||||||||||||||  ||| |||||| |||||||| ||||||||| ||||||| ||||||||    
T  14148472 aaaaacctaagaaatattttaggaggactaaaatcaaatgttgatatatttagggggaccacttacttat 14148403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 27503721 - 27503640
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaat 253  Q
    |||||||| |||||||| ||||||||   | ||||||||| |||||| ||||||||||||| |||||||||||  |||||||    
T  27503721 taaatatatcaatatttgattttagtttccataaaatattatttaggcttttggtccctctgaaatttttcattcatgaaat 27503640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 411
Target Start/End: Complemental strand, 5879978 - 5879875
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| |||||| ||||||||||||||  | ||||||||||||||||  || |||||| |||| || |||||||||| | ||| |||||||||| |    
T  5879978 ttcatggatgaaaaatgttagagggaccaaag-cttaagaaatattttagaaagactaaaatcaaatattagtatatttagggagactatttacttattt 5879880  T
Q  407 aaccc 411  Q
    |||||    
T  5879879 aaccc 5879875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 39484816 - 39484714
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||| ||||||||||| |||| || |||||||||||| ||| ||||| ||||| ||  |||||||||||  ||||| |||||||||||| ||||  |||    
T  39484816 ttttaaggttaaataagtaaatggttcccctaaatatatcaacatttt-ttttaatctccctaaaatatttcttaggattttggtccctccaaaaaattt 39484718  T
Q  242 catc 245  Q
    ||||    
T  39484717 catc 39484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 7766420 - 7766359
Alignment:
Q  167 ccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtcc 228  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||| |||| ||||| ||||    
T  7766420 ccccctaaatatactaacattttattttagtccccctataatattccttagattttttgtcc 7766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 14148848 - 14148916
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattta 386  Q
    ||||||||| |||| ||||||| ||||| |||||| |||| |||| |||||| |||||||||||||||||    
T  14148848 aaaaattttggagg-accaaaagcctaaaaaatatgttagggggactaaaatcaaatgttggtatattta 14148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 29242928 - 29242820
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| |||| || ||||||||  || ||| |||| ||||||||||  |||||| |||  ||||||||| |||||||| |||| |||||||     
T  29242928 agggttaaataagtaaattgt-cccctaaaattatcaacatttgattttagtccctctaaaaaatttcttaggttttcggtccctccaaaaattttcatt 29242830  T
Q  246 tatgaaatta 255  Q
     |||||||||    
T  29242829 catgaaatta 29242820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 20691273 - 20691343
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttag 217  Q
    ||||||||||||| |||| | |||| |||||||||||| |||| |||||| ||| |||||||||||| ||||    
T  20691273 agggttaaataagtaaatgg-ccccttaaatataccaaaatttgattttattccccctaaaatattccttag 20691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 404
Target Start/End: Complemental strand, 1047345 - 1047263
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||| ||||||||||||  ||||| ||| ||||||  |||||||||| |||| || ||||||||||   ||||||||||||||    
T  1047345 tttttgagggaccaaaagtctaaggaatgttttaggaggattaaaataaaatattagtatatttaggaagaccatttacttat 1047263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 20691343 - 20691274
Alignment:
Q  341 ctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||| |||||||||| |||| |||||| |||| ||||||||||||  ||| |||||||||||| ||||||    
T  20691343 ctaaggaatattttagggggaataaaatcaaattttggtatattta-aggggccatttacttatttaaccc 20691274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 9e-66; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 145 - 392
Target Start/End: Complemental strand, 16706596 - 16706354
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatatacca---atattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    |||||||||||| | |||||||||||||||||||||||   | |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  16706596 tagggttaaatatgtaaatagtccccctaaatataccaccaacatttgattttagtccccctaaaatattctttaggtttttggtccctctaaaattttc 16706497  T
Q  242 catctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcc 341  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||        ||||| ||| |||||||||||| ||||||||| ||    
T  16706496 catctatcaaattagtctctgctctagtgtaatactcaatgtagaacagagactaat--------ttcatagatgaaaaattttagaaggaccaaaagcc 16706405  T
Q  342 taagaaatattttagagggattaaaattaaatgttggtatatttagtggga 392  Q
    |||  || |||||||||||| |||||| |||||||||||||||||| ||||    
T  16706404 taaagaaaattttagagggactaaaatcaaatgttggtatatttagaggga 16706354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 147 - 387
Target Start/End: Original strand, 30748951 - 30749172
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||    
T  30748951 gggttaaataagtaaatggtcctcctaaatatacaaatatttgattttagtccccctaaaatattctttaggcttttggtcccttcaaaatttttcatct 30749050  T
Q  247 atgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaaga 346  Q
    ||||||||||||| ||           | ||||||||||||||  || ||||        || || ||| |||||||||||||| ||||||| | ||| |    
T  30749051 atgaaattagtccatg-----------ttctcaatgtagagcagggattaat--------tttatggatgaaaaattttagaggaaccaaaaacataaaa 30749131  T
Q  347 aatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||||||||||| |||||||| |||||||| |||||||||    
T  30749132 aatattttagaggaattaaaatcaaatgttgatatatttag 30749172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 147 - 387
Target Start/End: Original strand, 30770402 - 30770623
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||    
T  30770402 gggttaaataagtaaatggtcctcctaaatatacaaatatttgattttagtccccctaaaatattctttaggcttttggtcccttcaaaatttttcatct 30770501  T
Q  247 atgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaaga 346  Q
    ||||||||||||| ||           | ||||||||||||||  || ||||        || || ||| |||||||||||||| ||||||| | ||| |    
T  30770502 atgaaattagtccatg-----------ttctcaatgtagagcagggattaat--------tttatggatgaaaaattttagaggaaccaaaaacataaaa 30770582  T
Q  347 aatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||||||||||| |||||||| |||||||| |||||||||    
T  30770583 aatattttagaggaattaaaatcaaatgttgatatatttag 30770623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 145 - 411
Target Start/End: Original strand, 16706333 - 16706594
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    ||||||||||| || ||||| |||| ||||||||||||| |||| ||||||||||  ||||||| ||||||||| ||||||||| |||||||||||||||    
T  16706333 tagggttaaatgagaaaatattccctctaaatataccaacatttgattttagtccctctaaaattttctttaggcttttggtccttctaaaatttttcat 16706432  T
Q  245 ctatgaaattagtccctgctcta----gtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatc 340  Q
    |||||||||||||| ||| ||||    | ||| ||| |    ||||||| ||||||||        || || |||  ||||||||||||||||||||| |    
T  16706433 ctatgaaattagtctctgttctacattgagtattacac----tagagcagagactaat--------ttgatagatggaaaattttagagggaccaaaaac 16706520  T
Q  341 ctaagaaatattttagagggattaaaattaaatgt---tggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||  |||||||||| |||| |||||| ||||||   |||||||||||| ||||| |||||| ||| ||||||    
T  16706521 ctaaagaatattttagggggactaaaatcaaatgttggtggtatatttagggggactatttacatatttaaccc 16706594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 13765561 - 13765676
Alignment:
Q  152 aaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaa 251  Q
    ||||||| ||||| || ||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  13765561 aaataagtaaataatctccctaaatataccaacatttgattttagtccccataaaatattctttaggtttttggtccctttaatatttttcatttatgaa 13765660  T
Q  252 attagtccctgctcta 267  Q
    |||||||||| |||||    
T  13765661 attagtccctactcta 13765676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 14760131 - 14760018
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| ||||  ||||| |||||||||||| |||| |||||| ||| ||||||||||| |||||| |||||||||| ||||||||||||||    
T  14760131 tagggttaaataagtaaatgatccccttaaatataccaacatttgattttaatccccctaaaatattttttaggcttttggtccc-ctaaaatttttcat 14760033  T
Q  245 ctatgaaattagtcc 259  Q
    |||||||||||||||    
T  14760032 ctatgaaattagtcc 14760018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 146 - 256
Target Start/End: Complemental strand, 32800381 - 32800271
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||| |||||| ||||| ||||||||| | ||||||||||||||||||||||||||| ||     
T  32800381 agggtcaaataagtaaatagtcccactaaatatatcaatatttgattttaatcctcataaaatattatgtaggtttttggtccctctaaaattttttatg 32800282  T
Q  246 tatgaaattag 256  Q
    |||||||||||    
T  32800281 tatgaaattag 32800271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 208 - 359
Target Start/End: Original strand, 51941930 - 51942072
Alignment:
Q  208 tattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaat 307  Q
    |||| ||||||||||||||| |||||||||||| | | |||||||||||||||| |||||||||||||||||||||||||||  || ||||        |    
T  51941930 tattttttaggtttttggtcgctctaaaatttt-cttttatgaaattagtccctcctctagtgtaatactcaatgtagagcagggattaat--------t 51942020  T
Q  308 tcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagg 359  Q
    |||| ||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  51942021 tcatagatgaaaaattttagaggaaccaaaaacctaagaaatattttagagg 51942072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 22679335 - 22679457
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||||||||| || |||||| ||| || | |||||| ||| |||||||||| |||||||||||| ||||||| ||||  ||||||    
T  22679335 tagggttaaataagtaaatagtccctctgaatatatcaacatatgattttaatccccctaaaatatcctttaggttttttgtccctccaaaaaatttcat 22679434  T
Q  245 ctatgaaattagtccctgctcta 267  Q
    | |||||||||||||||||||||    
T  22679435 ccatgaaattagtccctgctcta 22679457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 140 - 264
Target Start/End: Complemental strand, 15393417 - 15393294
Alignment:
Q  140 tattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattt 239  Q
    |||||| || ||||||||| |||| ||||||| ||||||||||| |||| |||| ||||| ||||||||||| ||||||||||||||| || | ||||||    
T  15393417 tatttttggattaaataagtaaatggtcccccgaaatataccaacatttgatttcagtccccctaaaatatt-tttaggtttttggtctctttgaaattt 15393319  T
Q  240 ttcatctatgaaattagtccctgct 264  Q
    ||||| |||||||||||||| ||||    
T  15393318 ttcatttatgaaattagtccttgct 15393294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 262
Target Start/End: Complemental strand, 22679585 - 22679467
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    |||| |||||||||| |||   |||||||||||||||||| |||| ||||||||||  ||||||||||  |||||||||||||||||||||| |||||||    
T  22679585 ttagagttaaataagtaaacgatccccctaaatataccaacatttgattttagtccctctaaaatatttgttaggtttttggtccctctaaattttttca 22679486  T
Q  244 tctatgaaattagtccctg 262  Q
    || || ||| |||||||||    
T  22679485 tccattaaactagtccctg 22679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 414
Target Start/End: Complemental strand, 30749199 - 30748948
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||| | ||||| ||| |||||||||| ||| |||| |||||| | |  |||||||||| |||| ||||||||| ||||||||||||||||    
T  30749199 ttagggttaaatacgtaaataatcctcctaaatatatcaacatttgattttaattcctctaaaatattttttatgtttttggttcctctaaaatttttca 30749100  T
Q  244 tctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatccta 343  Q
    || || |||||| |||||||||||          || || ||| ||| |||||||        ||||| ||| |||||||||  ||||||||||| ||||    
T  30749099 tccataaaattaatccctgctcta----------cattg-agaacatggactaat--------ttcatagatgaaaaattttgaagggaccaaaagccta 30749019  T
Q  344 agaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaat 414  Q
    |  |||||||||| |||| |||||| |||| || ||||||||||  ||||||||||||||| |||||||||    
T  30749018 aagaatattttagggggactaaaatcaaatatttgtatatttaggaggaccatttacttatttaacccaat 30748948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 414
Target Start/End: Complemental strand, 30770650 - 30770399
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||| | ||||| ||| |||||||||| ||| |||| |||||| | |  |||||||||| |||| ||||||||| ||||||||||||||||    
T  30770650 ttagggttaaatacgtaaataatcctcctaaatatatcaacatttgattttaattcctctaaaatattttttatgtttttggttcctctaaaatttttca 30770551  T
Q  244 tctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatccta 343  Q
    || || |||||| |||||||||||          || || ||| ||| |||||||        ||||| ||| |||||||||  ||||||||||| ||||    
T  30770550 tccataaaattaatccctgctcta----------cattg-agaacatggactaat--------ttcatagatgaaaaattttgaagggaccaaaagccta 30770470  T
Q  344 agaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaat 414  Q
    |  |||||||||| |||| |||||| |||| || ||||||||||  ||||||||||||||| |||||||||    
T  30770469 aagaatattttagggggactaaaatcaaatatttgtatatttaggaggaccatttacttatttaacccaat 30770399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 147 - 297
Target Start/End: Original strand, 23485670 - 23485822
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    ||||| |||||| |||||||| |||||||||||  ||||||| ||||||||||   ||||||  | ||||  |||||||||||||||||||||||||| |    
T  23485670 gggttgaataagtaaatagtctccctaaatatattaatatttgattttagtccatttaaaatgctttttaaatttttggtccctctaaaatttttcattt 23485769  T
Q  247 atgaaattagtccctgctcta--gtgtaatactcaatgtagagcatagactaa 297  Q
    |||||||| ||  ||||||||  | |||||||||||||||||||  |||||||    
T  23485770 atgaaattggtttctgctctaatgcgtaatactcaatgtagagcggagactaa 23485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 411
Target Start/End: Original strand, 14760026 - 14760129
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| ||||||||||| |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||  |||| ||||||||||| |    
T  14760026 ttcatagatgaaaaattttag-gggaccaaaagcctaaaaaatattttagggggattaaaatcaaatgttggtatatttaaggggatcatttacttattt 14760124  T
Q  407 aaccc 411  Q
    |||||    
T  14760125 aaccc 14760129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 409
Target Start/End: Original strand, 22679488 - 22679580
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||| |||| | ||||||||| ||||    
T  22679488 aaaaaatttagagggaccaaaaacctaacaaatattttagagggactaaaatcaaatgttggtatatttagggggatcgtttacttatttaac 22679580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 30746773 - 30746887
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| |||||| ||||||||| ||||||| ||||||||   | ||||||||||||||||||||| |||||||  |||| |||||||     
T  30746773 gggttaaataagtaaatggtccccttaaatatactaatatttgattttagtttccttaaaatattctttaggttttttgtccctc-caaatatttcatcc 30746871  T
Q  247 atgaaattagtccctg 262  Q
    ||||||||||||||||    
T  30746872 atgaaattagtccctg 30746887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 30768224 - 30768338
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| |||||| ||||||||| ||||||| ||||||||   | ||||||||||||||||||||| |||||||  |||| |||||||     
T  30768224 gggttaaataagtaaatggtccccttaaatatactaatatttgattttagtttccttaaaatattctttaggttttttgtccctc-caaatatttcatcc 30768322  T
Q  247 atgaaattagtccctg 262  Q
    ||||||||||||||||    
T  30768323 atgaaattagtccctg 30768338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 258
Target Start/End: Original strand, 15393145 - 15393256
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| ||||||||| |  |||||||||||||||| ||||| |||| |||||||||||| ||||| |||||||||| | ||||    ||||||    
T  15393145 gggttaaataagtaaatagtcctcacaaatataccaatatttaattttcgtccccctaaaatattccttaggcttttggtcccacaaaaaaaaatcatct 15393244  T
Q  247 atgaaattagtc 258  Q
    ||||||||||||    
T  15393245 atgaaattagtc 15393256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 51942069 - 51942004
Alignment:
Q  202 ctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  51942069 ctaaaatatttcttaggtttttggttcctctaaaatttttcatctatgaaattaatccctgctcta 51942004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 20171480 - 20171396
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||||||| ||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||| || | ||||||||||||||    
T  20171480 aaaatttt-gagggaccaaaagtctaagaaatattttagagggactaaaatcaaatgttggtatattaag-gagaccatttacttat 20171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 404
Target Start/End: Original strand, 32800283 - 32800373
Alignment:
Q  314 ataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||||||||||||||||||||||| ||||   |||||||||   |||||||||| |||| ||| ||||||||||||||| ||||||||||    
T  32800283 ataaaaaattttagagggaccaaaaacctacataatattttatgaggattaaaatcaaatattgatatatttagtgggactatttacttat 32800373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 21537616 - 21537686
Alignment:
Q  171 ctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||||| |||||||| |||||| ||||| ||||||||| || | ||||||||||||||||||||||||    
T  21537616 ctaaatatatcaatatttaattttaatcctcttaaaatatttttaaagtttttggtccctctaaaattttt 21537686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 35294426 - 35294333
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||| |||||||||||| ||| ||||||||||| || ||| |||||| |||||||| ||||||||  |||| |||||| |||| ||||||    
T  35294426 aaaattttggagggaccaaaagcctcagaaatattttcgatggactaaaatcaaatgttgatatatttaaagggatcatttaattatttaaccc 35294333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 317 - 413
Target Start/End: Original strand, 15393317 - 15393412
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |||||||| | || |||||||| ||||| ||||||||||| |||| | |||| |||||||||||||||| | |||||||||||||||| ||| ||||    
T  15393317 aaaaatttcaaagagaccaaaaacctaa-aaatattttagggggactgaaatcaaatgttggtatatttcgggggaccatttacttatttaatccaa 15393412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 30747019 - 30746897
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||||| ||||| ||  | |||||||||||| |||| ||||||||||    ||||||||| |||| |||||| |  || ||||| ||||||    
T  30747019 ttagggttaaataagtaaataatcatc-taaatataccaacatttcattttagtcccttcaaaatattccttagatttttgatttctttaaaaattttca 30746921  T
Q  244 tctatgaaattagtccctgctcta 267  Q
    || ||||||||||||| |||||||    
T  30746920 tccatgaaattagtccatgctcta 30746897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 30768470 - 30768348
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||||| ||||| ||  | |||||||||||| |||| ||||||||||    ||||||||| |||| |||||| |  || ||||| ||||||    
T  30768470 ttagggttaaataagtaaataatcatc-taaatataccaacatttcattttagtcccttcaaaatattccttagatttttgatttctttaaaaattttca 30768372  T
Q  244 tctatgaaattagtccctgctcta 267  Q
    || ||||||||||||| |||||||    
T  30768371 tccatgaaattagtccatgctcta 30768348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 14760012 - 14759953
Alignment:
Q  351 ttttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||||||||||||||||||    
T  14760012 ttttagagggactaaaatcaaatgttggtatatttag-acgaccatttacttatgtaaccc 14759953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 15393227 - 15393144
Alignment:
Q  329 gggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtg-ggaccatttacttatgtaaccca 412  Q
    |||||||||| |||||| |||||||||| ||||  |||||||||| ||||||||||| ||| |||| |||||||||| |||||||    
T  15393227 gggaccaaaagcctaaggaatattttagggggacgaaaattaaatattggtatattt-gtgaggactatttacttatttaaccca 15393144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 317 - 404
Target Start/End: Complemental strand, 13765650 - 13765563
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||||| ||| ||||||||||| |||||  |||||||||  |||| |||||| |||||||||||||||||| | ||  ||||||||||    
T  13765650 aaaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggagattatttacttat 13765563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 21537686 - 21537616
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    |||||||||||||||||||||| | | | ||||||||||   ||||||||||||||| ||| |||||||||    
T  21537686 aaaaattttagagggaccaaaaactttaaaaatattttaagaggattaaaattaaatattgatatatttag 21537616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 8819391 - 8819331
Alignment:
Q  203 taaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgct 264  Q
    |||||||||| |||||||||||| ||||| ||||||||||||| || |||||||||| ||||    
T  8819391 taaaatattccttaggtttttgg-ccctccaaaatttttcatcaattaaattagtccttgct 8819331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 22679426 - 22679337
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||| ||||||| |||| |||||   ||||||||| ||||||||||| | |||||| |||||| || ||||| |||||||||| ||||||    
T  22679426 ttttggagggacaaaaaacctaaaggatattttagggggattaaaatcatatgttgatatattcagagggactatttacttatttaaccc 22679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 23528302 - 23528233
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttagg 218  Q
    |||||||||| ||||||||   ||||||||| ||| |||| ||||||||||| || ||||||||||||||    
T  23528302 gttaaataagtaaatagtctttctaaatatatcaacatttaattttagtccttctgaaatattctttagg 23528233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 35215030 - 35215074
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattt 188  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||    
T  35215030 ttagggttaaataagtaattagtccctctaaatataccaatattt 35215074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 35294332 - 35294444
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||  ||||  ||||  |||||||| ||| |||| ||||||||||  | ||||||||  | ||| |||||||||||| |||||||| |||     
T  35294332 agggttaaataattaaatgatccctttaaatatatcaacatttgattttagtccatcgaaaatatttctgaggcttttggtccctccaaaattttacatt 35294431  T
Q  246 tatgaaattagtc 258  Q
     ||||||||||||    
T  35294432 catgaaattagtc 35294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 341 - 411
Target Start/End: Original strand, 39255614 - 39255684
Alignment:
Q  341 ctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||||||||| |||||||| |||||||| || |||||   |||| ||||| |||| ||||||    
T  39255614 ctaagaaatattttagaggaattaaaatcaaatgttgataaatttaaaaggacaatttatttatttaaccc 39255684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 395
Target Start/End: Original strand, 10556039 - 10556084
Alignment:
Q  350 attttagagggattaaaattaaatgttggtatatttagtgggacca 395  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||||    
T  10556039 attttagagggattaaaatgaaaagttggtatatttatagggacca 10556084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 23485925 - 23485808
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatg 249  Q
    ||||||||| ||||  ||| |||||| ||||||| |||| |||||| | |  |||||||||||||||||| ||| ||  |||||| |  |||||| ||||    
T  23485925 ttaaataagtaaatgatcctcctaaacataccaaaatttgattttaattcctctaaaatattctttaggtatttagtttctctaacaaatttcatttatg 23485826  T
Q  250 aaattagtccctgctcta 267  Q
    || |||||| | ||||||    
T  23485825 aatttagtctccgctcta 23485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 23485864 - 23485921
Alignment:
Q  347 aatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||||||||||| |||||||| |||| ||||||| |||||  ||| |||||||||||    
T  23485864 aatattttagaggaattaaaatcaaattttggtatgtttaggaggatcatttacttat 23485921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 387
Target Start/End: Complemental strand, 39255539 - 39255475
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||||||| ||||||| | |||||||||||||| ||||| |||||| ||||||| ||||| ||||    
T  39255539 ttttagaggaaccaaaagcttaagaaatatttta-agggaataaaatcaaatgtttgtatacttag 39255475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 39785218 - 39785267
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttatttt 194  Q
    |||| ||||||||| |||||||||||||||| ||||||| |||| |||||    
T  39785218 taggattaaataagtaaatagtccccctaaaaataccaacatttaatttt 39785267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 140 - 410
Target Start/End: Complemental strand, 25906220 - 25905959
Alignment:
Q  140 tattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattt 239  Q
    ||||||||||||||||||| ||||| ||| |||||||||| ||| |||| |||||||||| ||| |||||||||||||| ||||||||||||| ||||||    
T  25906220 tattttagggttaaataagtaaataatcctcctaaatatatcaacatttgattttagtcccccttaaatattctttaggcttttggtccctct-aaattt 25906122  T
Q  240 ttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaat 339  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||||        || || ||| ||||||||||||||||||||||     
T  25906121 ttcatttatgaaattagtctctgctctagtgtaatactcaatgtagagcagggactaat--------tttatagatgaaaaattttagagggaccaaaag 25906030  T
Q  340 cctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    |||| |||||| ||||| |||| |||||| |||||||||||||| ||  |||| ||||||||||| |||||    
T  25906029 cctatgaaatactttagggggactaaaatcaaatgttggtatatataaggggatcatttacttatttaacc 25905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 149 - 409
Target Start/End: Original strand, 22297764 - 22298016
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| |||||||||| ||||||||| ||| |||| ||||||||||  |||||||||| |||||||||||||||||| |||||||| ||||||||    
T  22297764 gttaaataagtaaatagtccctctaaatatatcaacatttgattttagtccctctaaaatattttttaggtttttggtccctttaaaatttctcatctat 22297863  T
Q  249 gaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaa 348  Q
    ||||||||||||||| ||| ||||||||||||||||||||  ||||||||        |||||  || |||||||||||||||||||||| | ||| |||    
T  22297864 gaaattagtccctgcgctattgtaatactcaatgtagagctgagactaat--------ttcataaatgaaaaattttagagggaccaaaaacttaaaaaa 22297955  T
Q  349 tattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    |||||||  |||| |||||| ||||||| |||||||||| |||||||||||||||| ||||    
T  22297956 tattttaaggggactaaaatcaaatgttagtatatttagggggaccatttacttatttaac 22298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 151 - 411
Target Start/End: Original strand, 17047859 - 17048110
Alignment:
Q  151 taaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatga 250  Q
    |||||| | |||||||| | |||||||||||||||||| ||||||| |||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  17047859 taaatatgtaaatagtctctctaaatataccaatatttgattttagccctcctaaaatattctttaaacttttggtccctctaaaatttttcatttatga 17047958  T
Q  251 aattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaata 350  Q
    | |||||| |||||||| ||||||||||||||||||||| ||||||||        || || ||| |||  ||||||||| ||||||| ||||| ||||     
T  17047959 agttagtctctgctctactgtaatactcaatgtagagcagagactaat--------ttaatagatgaaattttttagaggaaccaaaagcctaaaaaatc 17048050  T
Q  351 ttttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||| |||| | |||| |||||||||||||||||  |||| |||| |||||| ||||||    
T  17048051 ttttagggggact-aaatcaaatgttggtatatttaaggggatcattcacttatttaaccc 17048110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 146 - 404
Target Start/End: Complemental strand, 13657806 - 13657556
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||||||| |  |||||||| || |||| ||||||||  |||||||||||| ||| || ||||| ||||||||||| |||||||     
T  13657806 agggttaaataagtaaatagtcctctgaaatatactaacatttgattttagttttcctaaaatattattttggcttttgttccctctaaaaattttcatg 13657707  T
Q  246 tatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaag 345  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | ||||||        ||||| ||| |||  |||||||| ||||||||  ||||     
T  13657706 tatgaaattagtccatgctctagtgtaatactcaatgtagagcaaaaactaat--------ttcatagatgaaattttttagagagaccaaaagtctaaa 13657615  T
Q  346 aaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
     ||||||||||||| | |||||| ||||||| |||||||||  ||||||||||| ||||    
T  13657614 gaatattttagaggaactaaaatcaaatgtttgtatatttaaagggaccatttatttat 13657556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 149 - 409
Target Start/End: Complemental strand, 22298016 - 22297764
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| |||| |||||||||||||||| || |||| |||||||||| | ||||||||| |||| ||||||||||||||||||||||||||| |||    
T  22298016 gttaaataagtaaatggtccccctaaatatactaacatttgattttagtccccttaaaatattttttaagtttttggtccctctaaaatttttcatttat 22297917  T
Q  249 gaaattagtccctgctcta----gtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaa 344  Q
    |||||||||| | ||||||    | ||| ||  |||  ||| |||  |||||||        ||||| ||| | |||||||| ||||||||||| |||||    
T  22297916 gaaattagtctcagctctacattgagtatta--caa--tagcgcagggactaat--------ttcatagatgagaaattttaaagggaccaaaaacctaa 22297829  T
Q  345 gaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
     |||||||||||||||| |||||| |||||||| ||||||||| ||||| |||||||||| ||||    
T  22297828 aaaatattttagagggactaaaatcaaatgttgatatatttagagggactatttacttatttaac 22297764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 6843078 - 6843202
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    |||||||||||||||  |||||||| |  ||||||||| || |||| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  6843078 tttagggttaaataaataaatagtctctttaaatatacaaacatttgattttagtcctcctagaatattccttagatttttggtccctctaaaatttttc 6843177  T
Q  243 atctatgaaattagtccctgctcta 267  Q
    ||||||||||||| |||||||||||    
T  6843178 atctatgaaattaatccctgctcta 6843202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 25905959 - 25906078
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatcta 247  Q
    ||||||||||| ||||  ||||| || ||||||||| |||| |||||||||| |||||| ||||   |||| ||||||||||||||||||||||||||||    
T  25905959 ggttaaataagtaaatgatccccttatatataccaacatttgattttagtccccctaaagtatttcataggcttttggtccctctaaaatttttcatcta 25906058  T
Q  248 tgaaattagtccctgctcta 267  Q
    | ||||||||||||||||||    
T  25906059 taaaattagtccctgctcta 25906078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 11929496 - 11929390
Alignment:
Q  191 ttttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcat 290  Q
    ||||||||| |||||||||||  |||||||||||||  |||||||||||| |||||||||||||| | ||| |||||||||||||||||||||||||||     
T  11929496 ttttagtccccctaaaatatt--ttaggtttttggtttctctaaaattttccatctatgaaattaattcctactctagtgtaatactcaatgtagagcag 11929399  T
Q  291 agactaatt 299  Q
    | |||||||    
T  11929398 aaactaatt 11929390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 140 - 261
Target Start/End: Original strand, 29673284 - 29673404
Alignment:
Q  140 tattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattt 239  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||| |||| |||||||||||||||||||||| |||||| ||||| |||||||||||  |    
T  29673284 tatttaagggttaaataagtaaatggtccccttaaatataccaacatttgattttagtcctcctaaaatatt-tttaggattttgttccctctaaaaaat 29673382  T
Q  240 ttcatctatgaaattagtccct 261  Q
    |||| | || ||||||||||||    
T  29673383 ttcaaccataaaattagtccct 29673404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 2344725 - 2344600
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    |||| |||||||||||| ||||||||| |||||||| ||||| ||||||||||||| |  |||| |||||| ||||  ||||||||||| ||||||||||    
T  2344725 tttttgggttaaataagtaaatagtcctcctaaatagaccaacattttattttagttcctctaacatattccttagtcttttggtccctttaaaattttt 2344626  T
Q  242 catctatgaaattagtccctgctcta 267  Q
     ||| || |||||| || ||||||||    
T  2344625 tatccattaaattaatctctgctcta 2344600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 146 - 267
Target Start/End: Complemental strand, 17048111 - 17047991
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    |||||||||||||  |||  ||||| |||||||||||| |||| | |||||||| ||||||| ||| |||||| ||||||| |||||||||  |||||||    
T  17048111 agggttaaataagtgaatgatccccttaaatataccaacatttga-tttagtccccctaaaagattttttaggcttttggttcctctaaaaaatttcatc 17048013  T
Q  246 tatgaaattagtccctgctcta 267  Q
    ||| ||||||||| ||||||||    
T  17048012 tattaaattagtctctgctcta 17047991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 29673379 - 29673291
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||| ||||||||||| |||||||||||  ||| |||||| |||||||||||||||||  |||||||||||||||| ||||||    
T  29673379 ttttagagggaacaaaatcctaa-aaatattttaggaggactaaaatcaaatgttggtatatttaaggggaccatttacttatttaaccc 29673291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 413
Target Start/End: Original strand, 2344622 - 2344722
Alignment:
Q  313 gataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccca 412  Q
    |||||||||||||| |||||||||||  ||||| ||||| ||||||| | |||||| |||||||||| |||||||  |||| |||||||||| |||||||    
T  2344622 gataaaaaattttaaagggaccaaaagactaaggaatatgttagaggaactaaaataaaatgttggtctatttaggaggactatttacttatttaaccca 2344721  T
Q  413 a 413  Q
    |    
T  2344722 a 2344722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 13657544 - 13657659
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||| ||||||||  |||| |||||  ||||||||| || |||| |||||||| |  ||||||||||||||||  |||||||| ||||||||  |||    
T  13657544 ttttaggattaaataaataaatggtccctttaaatatacaaacatttgattttagttcctctaaaatattctttagacttttggtctctctaaaaaattt 13657643  T
Q  242 catctatgaaattagt 257  Q
    ||||||||||||||||    
T  13657644 catctatgaaattagt 13657659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 24490693 - 24490807
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| |||| ||||  |||| |||||||| |||| |||||||||   |||||||||   ||| |||||||||||||| ||||||| |||||    
T  24490693 agggttaaataagtaaatggtccttctaa-tataccaacatttgattttagtctctctaaaatatctcttaagtttttggtccctccaaaatttctcatc 24490791  T
Q  246 tatgaaattagtccct 261  Q
    ||||||||||||||||    
T  24490792 tatgaaattagtccct 24490807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 317 - 404
Target Start/End: Original strand, 29673700 - 29673787
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||| |||| |||||||||||| | |||||||||||||||||| | |||||| ||||||| |||||||||| || |||||||||||||    
T  29673700 aaaatttttggagggaccaaaaccttaagaaatattttagaggaactaaaatcaaatgtttgtatatttaggggaaccatttacttat 29673787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 20510556 - 20510431
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||||||||| ||| ||||||||| | ||||||||  || |||| ||||||||||   ||||||||| |||||| ||||| ||||||||||   |||    
T  20510556 ttttagggttaaaaaagtaaatagtcctcataaatatataaacatttgattttagtcccattaaaatattttttaggcttttgatccctctaaacaattt 20510457  T
Q  242 catctatgaaattagtccctgctcta 267  Q
    |||  |||||||||| ||||||||||    
T  20510456 cattcatgaaattagcccctgctcta 20510431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 38900222 - 38900330
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||| || | ||||  ||||||     
T  38900222 agggttaaataagtaaattttccctctaaatataccaatattttattttagt-ctcctaaaatattttttatgcttttggttccaccaaaaaatttcatt 38900320  T
Q  246 tatgaaatta 255  Q
     |||||||||    
T  38900321 catgaaatta 38900330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 8086765 - 8086685
Alignment:
Q  175 atataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaatta 255  Q
    |||||| ||||||| |||||| ||| ||||||||||| ||||| ||||||||||||| |||| |||||||| |||||||||    
T  8086765 atatacaaatatttgattttaatccccctaaaatattttttagatttttggtccctcaaaaagttttcatccatgaaatta 8086685  T

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Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 24490785 - 24490694
Alignment:
Q  319 aaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||| |||||||||||| | ||||| ||||||||||| || |||||| ||||||||||||| ||||  ||||||||||||||| ||||||    
T  24490785 aaattttggagggaccaaaaacttaagagatattttagagagactaaaatcaaatgttggtata-ttagaaggaccatttacttatttaaccc 24490694  T

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Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 38298693 - 38298808
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||  ||   ||||||||| |||||||| |||| |||||  |||||||||||||||||||||| ||| ||||||||   ||||||    
T  38298693 agggttaaataagtaaatgatcagtctaaatatatcaatatttgatttaagtccctctaaaatattctttaggttttttgtctctctaaaaaaattcatc 38298792  T
Q  246 tatgaaattagtccct 261  Q
    ||||||| || |||||    
T  38298793 tatgaaaataatccct 38298808  T

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Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 3936045 - 3935965
Alignment:
Q  331 gaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||| | ||| |||||||||||||||||| |||| |||| ||| |||||||||  | ||||||||||||| ||||||    
T  3936045 gaccaaaaacgtaaaaaatattttagagggattgaaatcaaatattgttatatttagatgaaccatttacttatttaaccc 3935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 411
Target Start/End: Complemental strand, 6843186 - 6843082
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| ||||||||||||||||||||||  ||||| |||||| |||  ||| |||||| ||||||| |||||||||  | ||| ||||| |||| |    
T  6843186 ttcatagatgaaaaattttagagggaccaaaaatctaaggaatattctaggaggactaaaatcaaatgtttgtatatttaaagagactatttatttattt 6843087  T
Q  407 aaccc 411  Q
    |||||    
T  6843086 aaccc 6843082  T

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Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 15773799 - 15773715
Alignment:
Q  171 ctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaatta 255  Q
    |||||||||| || | || ||||||||| ||||||||||| | ||||| |||||||||||| ||||  ||||||| |||||||||    
T  15773799 ctaaatatactaacaattgattttagtcttcctaaaatatcccttaggcttttggtccctccaaaaaatttcatccatgaaatta 15773715  T

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Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 2846573 - 2846628
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcc 202  Q
    |||||||||||| |||| ||||||||||||||| ||| |||| |||||||||||||    
T  2846573 gggttaaataagtaaatggtccccctaaatatatcaacatttgattttagtcctcc 2846628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 38299200 - 38299117
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccct 230  Q
    |||||||||||| ||||| |  || ||||||||||||||||  |||||||| |  ||||||| ||||||||| |||||||||||    
T  38299200 gggttaaataagtaaatattttccttaaatataccaatattcgattttagttcctctaaaattttctttaggcttttggtccct 38299117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 413
Target Start/End: Complemental strand, 2846621 - 2846571
Alignment:
Q  363 taaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |||||| |||||||| ||||||||| |||||||||||||||| ||||||||    
T  2846621 taaaatcaaatgttgatatatttagggggaccatttacttatttaacccaa 2846571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 5161161 - 5161045
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    |||||||||||||||| ||||  |   | ||||||||  || |||| |||||| ||| ||||||||||| |||||||||||| ||| ||||||| |||||    
T  5161161 tttagggttaaataagtaaatgattttcttaaatatattaacatttgattttactcc-cctaaaatattatttaggtttttgatcc-tctaaaaattttc 5161064  T
Q  243 atctatgaaattagtccct 261  Q
    ||||||  |||||||||||    
T  5161063 atctatagaattagtccct 5161045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 25906120 - 25906213
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||| ||||||||||||| |||||  ||||||| || |||| |||||| |||||||| |||||||||  |||  |||||||||| ||||||    
T  25906120 aaaaattt-agagggaccaaaagcctaaagaatatttaagggggactaaaatcaaatgttgatatatttaggaggattatttacttatttaaccc 25906213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 2858411 - 2858464
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctc 201  Q
    ||||||||||| |||| ||||||||||||||| ||| |||| ||||||||||||    
T  2858411 ggttaaataagtaaatggtccccctaaatatatcaacatttgattttagtcctc 2858464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 29673791 - 29673698
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||| |||| || ||||||||||||| || |||| |||||||| |  ||||||||||  ||| | |||||||||||| |||| ||||||    
T  29673791 ttaaataagtaaatggttcccctaaatatacaaacatttgattttagttcctctaaaatatttcttaaggttttggtccctccaaaaattttca 29673698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 383
Target Start/End: Original strand, 8086689 - 8086765
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatat 383  Q
    ||||| ||| |||| |||| ||||||||||||  |||| ||||||||||| ||||||||||| |||| || ||||||    
T  8086689 ttcatggatgaaaactttttgagggaccaaaaatctaaaaaatattttagggggattaaaatcaaatatttgtatat 8086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 2858458 - 2858411
Alignment:
Q  363 taaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    |||||| |||||||| ||||||||| |||||||||||||||| |||||    
T  2858458 taaaatcaaatgttgatatatttagggggaccatttacttatttaacc 2858411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 3935954 - 3936045
Alignment:
Q  136 taaatattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtc 227  Q
    ||||||||  ||||||||||||| |||| || |  ||||||||| |||||||| |||| | |||  |||||||||| |||| ||||||||||    
T  3935954 taaatattaaagggttaaataagtaaatggttcatctaaatataacaatatttgatttcaatccctctaaaatattttttacgtttttggtc 3936045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 20510358 - 20510420
Alignment:
Q  168 cccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccct 230  Q
    ||||||||||||  || |||| |||||||||| |  |||||||||||||||||||| ||||||    
T  20510358 cccctaaatatattaacatttgattttagtcccctaaaaatattctttaggtttttagtccct 20510420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 12272579 - 12272526
Alignment:
Q  334 caaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||| ||||| || |||||||||| || |||||| ||||||||||||||||||    
T  12272579 caaaaacctaaaaattattttagagagactaaaatcaaatgttggtatatttag 12272526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 37978617 - 37978694
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggacca 395  Q
    ||||||||| |||||| ||||    ||||||  |||||||||||||||||  ||| ||||||||||||| ||||||||    
T  37978617 aaaattttatagggactaaaaattgaagaaaatttttagagggattaaaacgaaaagttggtatatttattgggacca 37978694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 38298783 - 38298694
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||| ||| |||| |||||  ||||||||||||||| | |||| |||| ||| |||||||||   || ||||||||||| ||||||    
T  38298783 ttttagagagacaaaaaacctaaagaatattttagagggacttaaatcaaatattgatatatttagactgatcatttacttatttaaccc 38298694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 150 - 410
Target Start/End: Complemental strand, 981169 - 980920
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatg 249  Q
    ||||||||| |||||||| | ||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  981169 ttaaataagtaaatagtctctctaaatataccaacatttgattttagtcc-cctaaaatattctttaggcttttggtccctctaaaatttttcatttatg 981071  T
Q  250 aaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaat 349  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||||        ||||| |||||||  |||||| |||||||||| ||||||||||    
T  981070 aaattagtctctgctctagtgtaatactcaatgttgagcagagactaat--------ttcatagataaaattttttag-gggaccaaaagcctaagaaat 980980  T
Q  350 attttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    |||||||| ||| |||||| |||||||| ||||||||  |||| ||||||||||| |||||    
T  980979 attttaga-ggactaaaatcaaatgttgatatatttaaagggatcatttacttatttaacc 980920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 149 - 411
Target Start/End: Complemental strand, 12874934 - 12874680
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| ||||||||  || |||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||| ||||||| |||    
T  12874934 gttaaataagtaaatagtcttcccaaatataccaatatttgattttagtccctctaaaatattatttaggtttttggtccctctaaaagttttcatttat 12874835  T
Q  249 gaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaa 348  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||        ||||| ||| |||  |||||||| ||||||||  |||||  |    
T  12874834 gaaattagtccctgctctagtgtaagactcaatgtagagcagagactaat--------ttcatagatgaaattttttagagagaccaaaagtctaaggga 12874743  T
Q  349 tattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||| |||||  ||||| |||||||||||||||||| |  ||||||||||||| ||||||    
T  12874742 tattttaaagggaccaaaatcaaatgttggtatatttagggaaaccatttacttatttaaccc 12874680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 16127920 - 16128070
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  16127920 gttaaataagtaaatagtccccttaaatataccaacatttaattttagtcctcctaaaatattatgtaggtttttggtccctctaaaatttttcatttat 16128019  T
Q  249 gaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    |||||||||| || ||||||||||| | ||||||||||||| |||||||||    
T  16128020 gaaattagtctcttctctagtgtaaaattcaatgtagagcagagactaatt 16128070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 4921423 - 4921267
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    |||||||||||||||  |||||||| | ||||||||| ||| |||| |||||| ||| | ||||||||| ||||| ||||| |||||||||||| |||||    
T  4921423 tttagggttaaataaataaatagtctctctaaatatatcaacatttgattttaatccccttaaaatattttttagattttttgtccctctaaaaattttc 4921324  T
Q  243 atctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  4921323 atctatgaaattagttcctactctagtgtaatactcaatgtagagcatggactaatt 4921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 16126222 - 16126372
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| ||| ||||||| |||||||||||| |||| ||||||||||||||||| |||| | || |||||| ||||||||||| |||||||| |||    
T  16126222 gttaaataagtaaacagtccccttaaatataccaacatttaattttagtcctcctaaattattatgtacgttttttgtccctctaaattttttcatttat 16126321  T
Q  249 gaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    |||| |||||||| ||||||||||| |  |||||||||||| | |||||||    
T  16126322 gaaactagtcccttctctagtgtaaaatccaatgtagagcacaaactaatt 16126372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 16333403 - 16333253
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| ||| ||||||| |||||||||||| |||| |||||| |||||||||| |||| | || |||||| ||||||||||| |||||||| |||    
T  16333403 gttaaataagtaaacagtccccttaaatataccaacatttaattttaatcctcctaaattattatgtacgttttttgtccctctaaattttttcatttat 16333304  T
Q  249 gaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    ||||||||||||| ||||||||||| |  |||||||||||| | |||||||    
T  16333303 gaaattagtcccttctctagtgtaaaatccaatgtagagcacaaactaatt 16333253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 168 - 386
Target Start/End: Original strand, 35926745 - 35926955
Alignment:
Q  168 cccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    |||||||||||||||| |||| |||||||||  | ||||||||| ||||||||||| || |||||||||  |||||| ||||||||||||| || |||||    
T  35926745 cccctaaatataccaacatttgattttagtctccataaaatattttttaggtttttagttcctctaaaacatttcatttatgaaattagtctctactcta 35926844  T
Q  268 gtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaa 367  Q
    || ||||| || |||||||||| ||||||||        |||||  ||||||||||||||||  | ||||| ||||| ||||||||||  | || |||||    
T  35926845 gtataatattcgatgtagagcaaagactaat--------ttcataaataaaaaattttagagaaatcaaaaacctaaaaaatattttattgagactaaaa 35926936  T
Q  368 ttaaatgttggtatattta 386  Q
    | |||||||||||||||||    
T  35926937 tcaaatgttggtatattta 35926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 37897574 - 37897695
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| |||||| || |||||||| ||||| |||| |||||| |||  ||||||||||| ||||||||| ||||||||||||| ||||||||    
T  37897574 agggttaaataaggaaatagccctcctaaatagaccaacatttgattttactccctctaaaatattccttaggttttcggtccctctaaaaattttcatc 37897673  T
Q  246 tatgaaattagtccctgctcta 267  Q
     |||||||||||| ||||||||    
T  37897674 catgaaattagtctctgctcta 37897695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 27847860 - 27847967
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatg 249  Q
    ||||||||| ||||||||||| |||||||||||| |||| |||||||||| | |||||||||| ||| ||||||||||||| ||||||| |||||||||     
T  27847860 ttaaataagtaaatagtccccataaatataccaacatttgattttagtccacttaaaatattccttaagtttttggtccctttaaaattattcatctatt 27847959  T
Q  250 aaattagt 257  Q
    ||||||||    
T  27847960 aaattagt 27847967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 18509495 - 18509608
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||  |||| ||||||||||||||||||| |||| ||||||||||  ||||||||||| || ||||||||||||||| |||||||| |||    
T  18509495 tagggttaaataattaaatggtccccctaaatataccaacatttgattttagtccctctaaaatattcctttggtttttggtccctccaaaattttccat 18509594  T
Q  245 ctatgaaattagtc 258  Q
    || | |||||||||    
T  18509595 ctgtaaaattagtc 18509608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 145 - 413
Target Start/End: Complemental strand, 32945868 - 32945610
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca- 243  Q
    |||||||||||||| ||||| | ||  |||||||||||| |||| |||||| |   | ||||||||||| |||||||||  || |||| |||||||| |     
T  32945868 tagggttaaataagtaaataattcc--taaatataccaaaatttgattttaatttccataaaatattctctaggttttttatctctctcaaattttttaa 32945771  T
Q  244 tctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatccta 343  Q
    | ||||||||||||| |||||||||| ||||||||||||||||| | ||| ||||        |||||  || |||||||||||||||| |||||  |||    
T  32945770 tttatgaaattagtctctgctctagtataatactcaatgtagagtagagattaat--------ttcataaat-aaaaattttagagggatcaaaaatcta 32945680  T
Q  344 agaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |  |||||||||  |||| |||||| |||||||||||||||| | ||||| |||||| ||| ||||||||    
T  32945679 aataatattttatggggactaaaatcaaatgttggtatattttgggggactatttacctatttaacccaa 32945610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 40152723 - 40152808
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagt 257  Q
    ||||||||| || |||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||    
T  40152723 taaatatacaaacattttattttagtcctcctaaaatattccttagattttttgtccctccaaaatttttcatctatgaaattagt 40152808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 18509590 - 18509497
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||| |||||||||||| || ||| ||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||| ||||||    
T  18509590 aaaattttggagggaccaaaaaccaaaggaatattttagagggactaaaatcaaatgttggtatatttagggggaccatttaattatttaaccc 18509497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 32945607 - 32945719
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    |||| |||||||||| | |||||||||||| ||||||||||| |||| |||||||||| | ||||||||| ||||| |||||| ||||||||||||||||    
T  32945607 tttttgggttaaataggtaaatagtcccccaaaatataccaacatttgattttagtccccataaaatattatttagatttttgatccctctaaaattttt 32945706  T
Q  242 catctatgaaatta 255  Q
     || ||||||||||    
T  32945707 -atttatgaaatta 32945719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 137 - 414
Target Start/End: Original strand, 980909 - 981175
Alignment:
Q  137 aaatattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaa 236  Q
    |||||||| | ||||||||||| ||||  ||||  |||||||| ||| |||| |||||||||||| |||||||||  ||||| |||||||||| ||||||    
T  980909 aaatatttaaaggttaaataagtaaatgatccctttaaatatatcaacatttgattttagtcctc-taaaatatttcttaggcttttggtccc-ctaaaa 981006  T
Q  237 tttttcatctatgaaattagtccctgctcta----gtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagaggga 332  Q
      ||| |||||||||||||||| |||||| |    | ||| ||| |    ||||||| |||||||||        ||||  || ||||||||||||||||    
T  981007 aattttatctatgaaattagtctctgctcaacattgagtattacac----tagagcagagactaatt--------tcataaatgaaaaattttagaggga 981094  T
Q  333 ccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaat 414  Q
    |||||| |||||  |||||||||| |||| |||||| |||||||||||||||||| | ||| |||||||||| ||| |||||    
T  981095 ccaaaagcctaaagaatattttag-gggactaaaatcaaatgttggtatatttagagagactatttacttatttaatccaat 981175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 136 - 385
Target Start/End: Original strand, 12874669 - 12874910
Alignment:
Q  136 taaatattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaa 235  Q
    |||||| || ||||||||||||| |||| ||  ||||||||||||||| |||| ||||| ||||   |||||||| | ||||  |||||||| |||||||    
T  12874669 taaataattgagggttaaataagtaaatggtttccctaaatataccaacatttgattttggtccctttaaaatatcccttagacttttggtctctctaaa 12874768  T
Q  236 atttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggacca 335  Q
    |  |||||||||||||||||||| ||||||||   | |  || |   |||||||  |||||||        |||||  || |||| ||||||||||||||    
T  12874769 aaatttcatctatgaaattagtctctgctctacattgagtcttacactagagcagggactaat--------ttcataaatgaaaacttttagagggacca 12874860  T
Q  336 aaatcctaagaaatattttagagggattaaaattaaatgttggtatattt 385  Q
    ||| |||||  ||||||||||||||| |||||| |||| |||||||||||    
T  12874861 aaaacctaaataatattttagagggactaaaatcaaatattggtatattt 12874910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 7328558 - 7328464
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaat 237  Q
    |||| |||||||||||| |||||||| |||||||||||| || |||| | |||||||| | |||||||||||||||||| ||||||||||||||||    
T  7328558 tttttgggttaaataagtaaatagtctccctaaatatactaacatttgactttagtcc-cataaaatattctttaggttattggtccctctaaaat 7328464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 147 - 370
Target Start/End: Original strand, 25330560 - 25330769
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||||||||||||||||| | ||| |||| ||||||||||  ||||||| |||||||| ||||| |||  | |||||   ||||| |    
T  25330560 gggttaaataagtaaatagtccccctaaatacatcaacatttgattttagtccctctaaaattttctttagattttttgtctttataaaaaacttcattt 25330659  T
Q  247 atgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaaga 346  Q
    |||||||||||| |      ||||||||| |||||||||||||  |||||||        |||||  || |||| ||||||| ||||||||| ||||| |    
T  25330660 atgaaattagtcac------agtgtaatattcaatgtagagcagggactaat--------ttcataaatgaaaatttttagaaggaccaaaaacctaaaa 25330745  T
Q  347 aatattttagagggattaaaatta 370  Q
    ||||||||| ||||| ||||||||    
T  25330746 aatattttaaagggactaaaatta 25330769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 174 - 409
Target Start/End: Complemental strand, 16128146 - 16127920
Alignment:
Q  174 aatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgtaa 273  Q
    |||||||||| |||| |||||| ||||  ||||||||||||||||||| |||| | ||||| ||||||||| ||||||||||||| ||||||||   | |    
T  16128146 aatataccaaaatttgattttaatcctt-taaaatattctttaggtttctggttcttctaacatttttcatttatgaaattagtctctgctctacattga 16128048  T
Q  274 tactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaat 373  Q
       | |   ||||| | |||||||||        ||||  || |||||||||||||||||||||| ||||   ||||||||||  ||| |||||||||||    
T  16128047 attttacactagagaagagactaatt--------tcataaatgaaaaattttagagggaccaaaaacctacataatattttaggaggactaaaattaaat 16127956  T
Q  374 gttggtatatttagtgggaccatttacttatgtaac 409  Q
    |||||||||||||  ||||| |||||||||| ||||    
T  16127955 gttggtatatttaaggggactatttacttatttaac 16127920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 146 - 267
Target Start/End: Complemental strand, 39159350 - 39159231
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    |||||||||||||  |||||||| | ||||||||| || |||| ||||||| | |   ||||||||||||||| |||||||||||| ||||  |||||||    
T  39159350 agggttaaataagttaatagtcctcttaaatatactaacatttgattttagccata--aaaatattctttaggattttggtccctccaaaaaatttcatc 39159253  T
Q  246 tatgaaattagtccctgctcta 267  Q
     |||||||||||||||||||||    
T  39159252 catgaaattagtccctgctcta 39159231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 25330767 - 25330690
Alignment:
Q  190 attttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    ||||||||||   ||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  25330767 attttagtccctttaaaatattttttaggtttttggtccttctaaaaattttcatttatgaaattagtccctgctcta 25330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 318 - 414
Target Start/End: Original strand, 20972385 - 20972481
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaat 414  Q
    |||||||||| |||||||||| |||||||||||||||   |||| |||||| |||||||| ||||||||  ||||||||| |||||| |||||||||    
T  20972385 aaaattttagcgggaccaaaaacctaagaaatattttttggggactaaaatcaaatgttgatatatttaaagggaccattcacttatttaacccaat 20972481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 43130404 - 43130286
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    |||||||||||||||||| |||| ||| ||||||||||||| | |||| |||| |||||  | ||||| ||| ||||| |||||||||||| ||||||||    
T  43130404 attttagggttaaataagtaaatggtctccctaaatatacc-acatttgatttcagtccctccaaaattttccttaggcttttggtccctccaaaatttt 43130306  T
Q  241 tcatctatgaaattagtccc 260  Q
     |||  ||||||||||||||    
T  43130305 ccattcatgaaattagtccc 43130286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 7328357 - 7328453
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctt-taggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    |||||||||||  |||| |||| |||||  | |||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  7328357 taaatataccatcatttgatttcagtccctccaaaatatttttgtaggtttttagtccctctaaaatttttcatttatgaaattagtccctgttcta 7328453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 37897679 - 37897599
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||| ||| |||| ||||||||||||| ||| |||||| ||||||||||||||| |||||| |||||||||| |||||||    
T  37897679 ttcatggatgaaaatttttagagggaccgaaaacctaaggaatattttagagggagtaaaatcaaatgttggtctatttag 37897599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 37897807 - 37897727
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtcc 228  Q
    ||||||||||| ||| |||| | ||||||||||||| ||||| |||||||||||||||||||||  ||||| |||||||||    
T  37897807 ggttaaataagtaaaaagtctcactaaatataccaacattttgttttagtcctcctaaaatatttcttaggcttttggtcc 37897727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 257
Target Start/End: Complemental strand, 16126471 - 16126366
Alignment:
Q  151 taaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatga 250  Q
    |||||||| ||||  ||| | |||||||||||| |||| |||||| ||  ||||||||||||||||||||| |||| | ||||| ||||||||| |||||    
T  16126471 taaataagtaaatgatcctcataaatataccaaaatttgattttaatcg-cctaaaatattctttaggtttctggttcttctaacatttttcatttatga 16126373  T
Q  251 aattagt 257  Q
    |||||||    
T  16126372 aattagt 16126366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 16192671 - 16192570
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttagg-tttttggtccctctaaaatttttca 243  Q
    |||||||||||||| ||||||||| | |||||||| ||| |||| |||||||||  |||||||||||| ||||| ||||||||| ||| ||||  |||||    
T  16192671 tagggttaaataagtaaatagtcctcttaaatatatcaacatttgattttagtctccctaaaatattccttaggctttttggtctctccaaaaaatttca 16192572  T
Q  244 tc 245  Q
    ||    
T  16192571 tc 16192570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 43130306 - 43130398
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||| |||||||||||| |||||| || ||||| |||||| | |||| ||||| |||||||||||| | |||||||||||||| ||||||    
T  43130306 aaaattttggagggaccaaaagcctaaggaaaattttggagggactgaaatcaaatg-tggtatatttagggagaccatttacttatttaaccc 43130398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 411
Target Start/End: Original strand, 4921315 - 4921419
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| |||| |||||||||||| ||||  |||| ||||||||||  ||||||||||| |||||||| ||||||||| | ||| ||||| |||| |    
T  4921315 ttcatagatgaaaatttttagagggacaaaaaatctaaaaaatattttaaggggattaaaatcaaatgttgatatatttagagagactatttatttattt 4921414  T
Q  407 aaccc 411  Q
    |||||    
T  4921415 aaccc 4921419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 26403030 - 26403114
Alignment:
Q  171 ctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaatta 255  Q
    |||||||||  || |||| |||||||||| |||||||||||||| ||| ||||||||  |||||||||||||||  |||||||||    
T  26403030 ctaaatatattaaaatttgattttagtccccctaaaatattcttcaggcttttggtctgtctaaaatttttcattaatgaaatta 26403114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 330 - 410
Target Start/End: Original strand, 37897727 - 37897807
Alignment:
Q  330 ggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    ||||||||| |||||||||||||||||  ||| |||||  |||||||||||||||||||| |||  ||||||||| |||||    
T  37897727 ggaccaaaagcctaagaaatattttaggaggactaaaacaaaatgttggtatatttagtgagactttttacttatttaacc 37897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 35926955 - 35926860
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    |||||||||||| |||| |||||||||    ||||||||| |||||||||||| |  ||||||||||||| || |||||||||||||  |||||||    
T  35926955 taaatataccaacatttgattttagtctcaataaaatattttttaggtttttgatttctctaaaattttttatttatgaaattagtctttgctcta 35926860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 16333154 - 16333259
Alignment:
Q  151 taaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatga 250  Q
    |||||||| ||||  ||| | |||||||| ||| |||| |||||| ||  ||||||||||||||||||||| |||| | ||||| ||||||||| |||||    
T  16333154 taaataagtaaatgatcctcataaatatatcaaaatttgattttaatcg-cctaaaatattctttaggtttctggttcttctaacatttttcatttatga 16333252  T
Q  251 aattagt 257  Q
    |||||||    
T  16333253 aattagt 16333259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 30714117 - 30714233
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    |||| ||||||||||| | |||| |||||| |||||||| ||| |||| ||||||||| || ||||||||| |||||  |||| || |||| ||||||||    
T  30714117 atttgagggttaaata-gtaaatggtccccttaaatatatcaacatttgattttagtcttcttaaaatattttttagcctttttgttcctc-aaaatttt 30714214  T
Q  241 tcatctatgaaattagtcc 259  Q
      |||||||||||||||||    
T  30714215 ctatctatgaaattagtcc 30714233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 20972478 - 20972385
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    ||||||||||||  ||| |||||  |||||||| ||| |||| |||||||||| |  ||||||||  |||||||||||||||| ||||||||||    
T  20972478 gggttaaataagtgaatggtccctttaaatatatcaacatttgattttagtccccaaaaaatatttcttaggtttttggtcccgctaaaatttt 20972385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 27847948 - 27847855
Alignment:
Q  320 aattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    ||||||| ||||||||||| | |||| |||||||||   ||| |||||| |||||||||||||||||  ||||| |||||||||| ||| ||||    
T  27847948 aattttaaagggaccaaaaacttaaggaatattttaagtggactaaaatcaaatgttggtatatttatggggactatttacttatttaatccaa 27847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 39786493 - 39786565
Alignment:
Q  331 gaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||| ||||||||||| || ||| ||||||||||    
T  39786493 gaccaaaattctaaaaaatattttagggggactaaaattaaatgctggtatattta-tgagactatttacttat 39786565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 25330621 - 25330559
Alignment:
Q  350 attttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccca 412  Q
    |||||||||||| |||||| |||||||| | ||||||| ||||| |||||||||| |||||||    
T  25330621 attttagagggactaaaatcaaatgttgatgtatttagggggactatttacttatttaaccca 25330559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 32483645 - 32483766
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||| | ||  |||||||||  | |||| |||||| | | | ||||||||| |||||| |||||||  |||||||| |||||||     
T  32483645 agggttaaataagtaaataattcctttaaatatactgacatttgattttaattcccataaaatattttttaggcttttggtttctctaaaaattttcatt 32483744  T
Q  246 tatgaaattagtccctgctcta 267  Q
    |||||||| |||| || |||||    
T  32483745 tatgaaatcagtctctactcta 32483766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 413
Target Start/End: Original strand, 7328464 - 7328555
Alignment:
Q  321 attttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |||||||||||||||| | |||||  |||||||||  |||| |||| | ||||||| |||||||||| | ||| |||||||||| ||||||||    
T  7328464 attttagagggaccaataacctaaagaatatttta-tgggactaaagtcaaatgttagtatatttagggagactatttacttatttaacccaa 7328555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 8185259 - 8185335
Alignment:
Q  185 attttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||| |||||||||| ||||||||||| |||||| ||||||||| |  |||||||| |||| ||||| || ||||||    
T  8185259 atttgattttagtccccctaaaatattatttaggcttttggtccattcaaaattttccatccatgaagttggtccct 8185335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 409
Target Start/End: Original strand, 16333311 - 16333403
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    ||||| ||||||||||| |||| | ||   |||| |||||  ||||||||||||||||||||||||||||  |||||  ||||||||| ||||    
T  16333311 aaaaaatttagagggacaaaaaacgtacataataatttaggaggattaaaattaaatgttggtatatttaaggggactgtttacttatttaac 16333403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 386
Target Start/End: Original strand, 27847999 - 27848063
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattta 386  Q
    |||| |||||||||||| | |||| ||||||||| || || |||||| |||||||||||||||||    
T  27847999 ttttggagggaccaaaagcttaagtaatattttaaagagactaaaatcaaatgttggtatattta 27848063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 7328427 - 7328333
Alignment:
Q  317 aaaaattttagagggaccaaaatccta-agaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||||||| |||| |||| | ||||||||| |||||| | |||| ||||| ||||||||||| | ||| | ||||||||| ||||||    
T  7328427 aaaaattttagagggactaaaaacctacaaaaatattttggagggactgaaatcaaatgatggtatattta-taggatcgtttacttatttaaccc 7328333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 39751274 - 39751358
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatatt-ctttaggtttttggtccctctaaaatttttcatctatgaaattagt 257  Q
    ||||||||||||||||| |||||||| | | ||||||||| ||| |  ||||||||||  | |||||||||||| ||||||||||||    
T  39751274 taaatataccaatatttgattttagttcccttaaaatattccttaaactttttggtcc--ccaaaatttttcatatatgaaattagt 39751358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 4921192 - 4921254
Alignment:
Q  170 cctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctct 232  Q
    ||||||||||||||||||| |||||| | | | |||||||||| ||| | |||||||||||||    
T  4921192 cctaaatataccaatatttgattttaattcccttaaaatattccttaagcttttggtccctct 4921254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 400
Target Start/End: Complemental strand, 35926813 - 35926736
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttac 400  Q
    ||||||||| || |||| ||||| ||||||||||  | || |||||| |||||||||||||||||| ||||| ||||||    
T  35926813 ttttagaggaactaaaaacctaaaaaatattttatggagactaaaatcaaatgttggtatatttag-gggactatttac 35926736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 4921254 - 4921193
Alignment:
Q  326 agagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||||||||||| | |||| |||||||||  || |||||||| |||| |||||||||||||    
T  4921254 agagggaccaaaagcttaaggaatattttaagggaattaaaatcaaatattggtatatttag 4921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 17368882 - 17368841
Alignment:
Q  220 ttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    ||||||||||||||||||||| || |||||||||| ||||||    
T  17368882 ttttggtccctctaaaattttccagctatgaaattggtccct 17368841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24225616 - 24225551
Alignment:
Q  160 aaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttgg 225  Q
    |||| ||||| | |||||||  ||||||| |||||| || || |||||||||||||||||||||||    
T  24225616 aaatggtccctcaaaatatattaatatttgattttaatcttcataaaatattctttaggtttttgg 24225551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 39786311 - 39786396
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtc 227  Q
    ||||||||||||||||| ||||| |||   |||||||||||| |||| |||||||||   ||||||| ||| ||||  ||||||||    
T  39786311 ttttagggttaaataagtaaataatcctattaaatataccaacatttgattttagtctcgctaaaattttccttagacttttggtc 39786396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 39786569 - 39786493
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtc 227  Q
    ||||||||| |||||||| |  |||||||||||  |||| |||||||||| ||||||||||| |||||  ||||||||    
T  39786569 ttaaataagtaaatagtctca-taaatataccagcatttaattttagtccccctaaaatattttttagaattttggtc 39786493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 5e-61; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 139 - 411
Target Start/End: Complemental strand, 31298988 - 31298724
Alignment:
Q  139 atattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatt 238  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||| |||||||| |  ||||||||||||||||| ||||| |||||||||| ||    
T  31298988 atattatagggttaaataagtaaatagtccctttaaatataccaatatttgattttagttcctctaaaatattctttaggcttttgctccctctaaattt 31298889  T
Q  239 tttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaa 338  Q
    ||||||||| |||||||||| |||| ||||||||||| |||  |||||||||  ||||||        |||||  || |  |||||||||||||||||||    
T  31298888 tttcatctacgaaattagtctctgcgctagtgtaatattcagcgtagagcatgcactaat--------ttcatttatgagcaattttagagggaccaaaa 31298797  T
Q  339 tcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||  | || ||||||||||| ||||||    
T  31298796 gcctaagaaatattttagagggattaaaattaaatgttggtatttttaaagagatcatttacttatttaaccc 31298724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 142 - 409
Target Start/End: Complemental strand, 13340704 - 13340445
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||||||||||| | ||||||||||| ||||||||| || |||| |||||||||| | ||||||||||||||||||||||||||||||||||  |||    
T  13340704 ttttagggttaaatatgaaaatagtccccttaaatatactaacatttgattttagtccccataaaatattctttaggtttttggtccctctaaaaaattt 13340605  T
Q  242 catctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcc 341  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||  || |||       | ||||||||| |||||||||||| ||    
T  13340604 catttatgaaattagtccctgctctagtgtaatactcaatgtagagcaggaactaatttctt-aat-------tgaaaaattttggagggaccaaaagcc 13340513  T
Q  342 taagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    |||  ||| ||||| ||||| |||||| |||||||||||||||||  ||||| |||||||||| ||||    
T  13340512 taaagaatgttttatagggactaaaatcaaatgttggtatatttaaggggactatttacttatttaac 13340445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 142 - 299
Target Start/End: Complemental strand, 34637685 - 34637528
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||||||||||||| |||||||| ||||||||||| ||| |||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  34637685 ttttagggttaaataagtaaatagtcaccctaaatatatcaacatttgattttagttcccctaaaatattcttgaggtttttggtccctctaaaattttt 34637586  T
Q  242 catctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    ||| || |||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  34637585 catttaagaaattagtccctaatttagtgtaatactcaatgtagagcatagactaatt 34637528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 149 - 267
Target Start/End: Original strand, 13340445 - 13340563
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| ||||||||||| |||||||||||| |||| ||||||||||   ||||| |||||||||| |||||||||||| |||||||||||  ||     
T  13340445 gttaaataagtaaatagtccccttaaatataccaacatttgattttagtccctataaaacattctttaggcttttggtccctccaaaatttttcaattaa 13340544  T
Q  249 gaaattagtccctgctcta 267  Q
    ||||||||| |||||||||    
T  13340545 gaaattagttcctgctcta 13340563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 24704308 - 24704421
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatcta 247  Q
    |||| |||||| |||| || || |||||||||||||||||| |||||||||  ||||||||||| |||| | ||||||||||||||||||||| || |||    
T  24704308 ggttgaataagtaaatggttcctctaaatataccaatatttgattttagtctccctaaaatattatttatgcttttggtccctctaaaattttccaacta 24704407  T
Q  248 tgaaattagtccct 261  Q
    ||||||||||||||    
T  24704408 tgaaattagtccct 24704421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 12289979 - 12290100
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| |||||||| ||||||||||||||| |||| ||||||| |  ||||||||||||  |||||||||| |||||  |||| ||||||||    
T  12289979 agggttaaataagtaaatagtctccctaaatataccaacatttgattttagcctgcctaaaatattccctaggtttttgatcccttcaaaaattttcatc 12290078  T
Q  246 tatgaaattagtccctgctcta 267  Q
     ||||||||| |||| ||||||    
T  12290079 catgaaattaatccccgctcta 12290100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 34637425 - 34637544
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||||||| || |||||||||||| |||| |||||||||| |||||||||||||| ||  ||||||||||| |||||   ||||| |    
T  34637425 gggttaaataagtaaatagtctccataaatataccaacatttgattttagtcc-cctaaaatattcttgagacttttggtccctttaaaaaaattcattt 34637523  T
Q  247 atgaaattagtccctgctcta 267  Q
    ||||||||||||  |||||||    
T  34637524 atgaaattagtctatgctcta 34637544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 307 - 413
Target Start/End: Complemental strand, 30519784 - 30519679
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| ||| |||||||||||||||||||||| | |||  ||||||||| || ||||||||| ||||||||||||||||||   |||||||||||||| |    
T  30519784 ttcatggatgaaaaattttagagggaccaaaaacttaaataatattttaaagagattaaaatcaaatgttggtatatttag-acgaccatttacttattt 30519686  T
Q  407 aacccaa 413  Q
    |||||||    
T  30519685 aacccaa 30519679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 7359674 - 7359562
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatcta 247  Q
    ||||||||||| || | ||| ||||||||||||||| |||| |||||| ||| ||||||||||| |||||| ||||| |||| | |||||||| ||||||    
T  7359674 ggttaaataagtaactcgtcgccctaaatataccaacatttgattttactccccctaaaatattatttaggcttttgatccc-ccaaaattttccatcta 7359576  T
Q  248 tgaaattagtccct 261  Q
    |||||||| |||||    
T  7359575 tgaaattaatccct 7359562  T

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Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 404
Target Start/End: Original strand, 14365097 - 14365176
Alignment:
Q  324 ttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| |||||||| |||| ||| |||||||||||||||||    
T  14365097 ttagagggaccaaaattctaagaaatattttagatggactaaaatcaaatgttgatata-ttactgggaccatttacttat 14365176  T

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Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 30519704 - 30519792
Alignment:
Q  171 ctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtcc 259  Q
    ||||||||||||| |||| |||||| ||    ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  30519704 ctaaatataccaacatttgattttaatctctttaaaatattatttaagtttttggtccctctaaaatttttcatccatgaaattagtcc 30519792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 403305 - 403383
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttg 224  Q
    |||||||||||||| |||||||||| ||||||| || ||||||| |||||| |||| |||||||||||||||||||||||    
T  403305 tagggttaaataagtaaatagtccctctaaataaactaatatttaattttaatcct-ctaaaatattctttaggtttttg 403383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 24704817 - 24704727
Alignment:
Q  168 cccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtc 258  Q
    |||||||||||| |||||||| |||||||| | ||||||||||||||||  ||||| ||||||| |||||||| || |||| |||||||||    
T  24704817 cccctaaatatatcaatatttgattttagttcccctaaaatattctttaaatttttagtccctccaaaattttccaactataaaattagtc 24704727  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 2401826 - 2401925
Alignment:
Q  165 gtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgct 264  Q
    |||||| |||||||||||||  || ||||||| || |||||||| |||| || | |||| |||||||||||||| ||||| ||||||||| |||||||||    
T  2401826 gtccccttaaatataccaattgttgattttagcccccctaaaattttctataagcttttagtccctctaaaattcttcatttatgaaattggtccctgct 2401925  T

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Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 24704400 - 24704314
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||||||||||||||||||| | |||  |||||||||| | || |||||| |||| ||||||||||||| || |||||||||||||    
T  24704400 aaaattttagagggaccaaaagcataaataatattttagggagactaaaatcaaatattggtatatttagaggaaccatttacttat 24704314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 31298886 - 31298980
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||| |||||||||| ||||| |||||  ||||||||||||| | |||||| |||| ||||||||||||  ||||| |||||||||| ||||||    
T  31298886 aaaaaatttagagggagcaaaagcctaaagaatattttagaggaactaaaatcaaatattggtatatttaaagggactatttacttatttaaccc 31298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 34637586 - 34637680
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||||||||||||| ||| |  |||||||||| || | |||||| |||||||| ||||||||| | ||| |||||||||| ||||||    
T  34637586 aaaaattttagagggaccaaaaacctcaagaatattttaggggaactaaaatcaaatgttgatatatttagggtgactatttacttatttaaccc 34637680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 12290136 - 12290224
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||| ||||||||||| |  ||||| | ||||||||| | ||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  12290136 ttttaaagggaccaaaagcgaaagaattgttttagaggaactaaaattaaatgttggtatatttag-gggatcatttacttatttaaccc 12290224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 31298722 - 31298844
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| ||||  || |  |||| ||||||| |||| |||||| |||  ||||||||||  ||||| |||||||||||||||||||  ||||    
T  31298722 tagggttaaataagtaaatgatctctttaaaaataccaacatttaattttaatccctctaaaatatttcttaggcttttggtccctctaaaattgctcat 31298821  T
Q  245 ctatgaaattagtccctgctcta 267  Q
      ||||||||||| | |||||||    
T  31298822 aaatgaaattagtgcatgctcta 31298844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 10284213 - 10284333
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |   |||||||||| || |||||||||| ||| ||| ||||| |||  ||||  |||||    
T  10284213 ttagggttaaataagaaaataatccctctaaatataccaaca---tattttagtcttcataaaatattcgttaagttattggttccttcaaaaaatttca 10284309  T
Q  244 tctatgaaattagtccctgctcta 267  Q
    |  || | ||||||||||||||||    
T  10284310 ttcataacattagtccctgctcta 10284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 403383 - 403307
Alignment:
Q  334 caaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||| |||||  ||||||||||||| ||||||||||||| || || ||||||| ||||| |||||||||| ||||||    
T  403383 caaaaacctaaagaatattttagagg-attaaaattaaatattagtttatttagagggactatttacttatttaaccc 403307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 7359593 - 7359674
Alignment:
Q  329 gggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    |||| ||||| |||||  |||||||||| |||| |||||| |||||||||||||||||| | ||| | |||||||| |||||    
T  7359593 gggatcaaaagcctaaataatattttagggggagtaaaatcaaatgttggtatatttagggcgacgagttacttatttaacc 7359674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 13340610 - 13340699
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||||||| |||||  |||||||||  |||| |||||| ||||||| |||||||||  ||||| |||| | ||| ||||||    
T  13340610 ttttagagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttagtatatttaaggggactattttcatatttaaccc 13340699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 6190565 - 6190648
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtc 227  Q
    ||||||||||| |||| ||||  || ||||||||||| ||| |||| |||||||| ||||| |||||||  ||||||||||||||    
T  6190565 tttagggttaactaagtaaatgatctccctaaatatatcaacatttgattttagt-ctccttaaatatttcttaggtttttggtc 6190648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 12290230 - 12290113
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttag-tcctcctaaaatattctttaggtttttggtccctctaaaattt 239  Q
    |||||||||||||||||| ||||  ||||| |||||||||||| |||| ||||||| |||||  |||  |||||||  | ||||||||||| |||||       
T  12290230 attttagggttaaataagtaaatgatcccc-taaatataccaacatttaattttagttcctctaaaacaattcttt-cgcttttggtccctttaaaaaaa 12290133  T
Q  240 ttcatctatgaaattagtcc 259  Q
    |||||| |||||||||||||    
T  12290132 ttcatccatgaaattagtcc 12290113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 34637513 - 34637424
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccca 412  Q
    ||||| |||||||||||  || |  |||||||||| |||| |||||| |||||||||||||||||  | ||| |||||||||| |||||||    
T  34637513 ttttaaagggaccaaaagtctcaagaatattttag-gggactaaaatcaaatgttggtatatttatggagactatttacttatttaaccca 34637424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 19045077 - 19045118
Alignment:
Q  342 taagaaatattttagagggattaaaattaaatgttggtatat 383  Q
    |||||||||||||||| ||| |||||| ||||||||||||||    
T  19045077 taagaaatattttagaaggactaaaatcaaatgttggtatat 19045118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 5e-61; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 139 - 411
Target Start/End: Original strand, 54164458 - 54164722
Alignment:
Q  139 atattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatt 238  Q
    |||||| ||||||||||||| ||||||||   ||||||||||||| |||| |||||||||||| ||||||||  |||||| ||||||||| |||||||||    
T  54164458 atatttaagggttaaataagtaaatagtcgttctaaatataccaacatttgattttagtcctcataaaatatattttaggcttttggtccatctaaaatt 54164557  T
Q  239 tttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaa 338  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||||  |||||||        |||||  || |||||||||||||||||| |||    
T  54164558 tttcatttatgaaattagtctctactctagtgtaatactcaatgtagagcagtgactaat--------ttcataaatgaaaaattttagagggaccgaaa 54164649  T
Q  339 tcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
     ||||| |||||||||| || || |||||| |||||||||||||||||| | ||| |||||||||| ||||||    
T  54164650 acctaaaaaatattttatagagactaaaatcaaatgttggtatatttagggagactatttacttatttaaccc 54164722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 147 - 411
Target Start/End: Complemental strand, 28687716 - 28687461
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| ||||||| |   |||||||| ||| |||| ||||||||    |||||||||| |||||| ||||||||||||||||||||||||||     
T  28687716 gggttaaataagtaaatagttctt-taaatatatcaacatttgattttagttactctaaaatattttttagggttttggtccctctaaaatttttcatca 28687618  T
Q  247 atgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaaga 346  Q
    || ||||||||||||||||||||||||| || |||||||||||  |||||||        ||||   || |||| ||||||| ||||||||| | ||||     
T  28687617 ataaaattagtccctgctctagtgtaatgcttaatgtagagcacggactaat--------ttcacatatgaaaatttttagatggaccaaaagcataagg 28687526  T
Q  347 aatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||| |||||||||||||||||||||||||||  |||  ||||||| ||| ||||||    
T  28687525 aatattttagagagattaaaattaaatgttggtatatttaaagggctcatttacatatttaaccc 28687461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 140 - 410
Target Start/End: Original strand, 13552662 - 13552917
Alignment:
Q  140 tattttagggttaaataagcaaatagtccccctaaatataccaatattttatttt-agtcctcctaaaatattctttaggtttttggtccctctaaaatt 238  Q
    |||||| |||||||||||| ||||| || |||||||||||| ||||||| ||||| ||||| |  |||||||| |||| | ||||||||  |||||||||    
T  13552662 tatttttgggttaaataagtaaataatctccctaaatatactaatatttgatttttagtccccaaaaaatattttttaagcttttggtcgttctaaaatt 13552761  T
Q  239 tttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaa 338  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||||                || |||||||||||| |||||||||    
T  13552762 tttcatttatgaaattagtctctgctctagtgtaatactcaatgtagagcagggactaa----------------atgaaaaattttagaaggaccaaaa 13552845  T
Q  339 tcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
     |||||  |||||||||  |||| |||||| |||| ||| |||||||||  |||| |||||||||| |||||    
T  13552846 gcctaaataatattttatggggactaaaatcaaatattgatatatttaggaggactatttacttatttaacc 13552917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 54164724 - 54164602
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||||||| ||||||||||||||| |||| |||||||||    ||||||||| |||||||||| |||||||||||||||||||||    
T  54164724 tagggttaaataagtaaatagtctccctaaatataccaacatttgattttagtctctataaaatattttttaggttttcggtccctctaaaatttttcat 54164625  T
Q  245 ctatgaaattagtccctgctcta 267  Q
     ||||||||||||| ||||||||    
T  54164624 ttatgaaattagtcactgctcta 54164602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 7513526 - 7513679
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||||  || ||||||||||||| |||| |||||| |   | ||||||||| |||||| ||||||| | |||||||||||||||     
T  7513526 agggttaaataagtaaatagctcctctaaatataccaacatttaattttaattaccttaaaatattttttaggcttttggttcatctaaaatttttcatt 7513625  T
Q  246 tatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    |||||||||||||  | ||||||||||||||| ||||||||||| |||||||||    
T  7513626 tatgaaattagtctttactctagtgtaatacttaatgtagagcagagactaatt 7513679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 13552917 - 13552821
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    ||||||||||| ||||||||| |||||||||| |||||||| |||||||||| | ||||||||| |||||| ||||||||| |||||||||||||||    
T  13552917 ggttaaataagtaaatagtcctcctaaatatatcaatatttgattttagtccccataaaatattatttaggcttttggtccttctaaaatttttcat 13552821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 172 - 286
Target Start/End: Complemental strand, 34665209 - 34665095
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgt 271  Q
    |||||||||||| |||| |||||||||  ||||||||||| |||||| ||||| ||| |||| ||  ||||||  ||||||||||||||| |||||||||    
T  34665209 taaatataccaacatttgattttagtcaccctaaaatattttttaggcttttgttccttctacaaaatttcattgatgaaattagtccctactctagtgt 34665110  T
Q  272 aatactcaatgtaga 286  Q
    |||||| ||||||||    
T  34665109 aatactaaatgtaga 34665095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 32186630 - 32186724
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |||||||||||| |||||||| |||||  ||||||||||||| | ||||||||||||||||||||||||  |||||||||| ||||| ||||||||    
T  32186630 aaaattttagagagaccaaaagcctaaagaatattttagaggaactaaaattaaatgttggtatattta-agggaccattttcttatttaacccaa 32186724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 17431192 - 17431102
Alignment:
Q  171 ctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    ||||||||| ||| |||| |||||||||| ||||||||||| |||||| |||||||||||| |||| |||||||| ||||||||| |||||    
T  17431192 ctaaatatatcaacatttgattttagtccccctaaaatattttttaggcttttggtccctccaaaaattttcatccatgaaattaatccct 17431102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 32186722 - 32186611
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| |||||  |||||||||||| |||| |||||||| |  ||||||||||||||||| |||||||| |||||||| ||||||| |    
T  32186722 gggttaaataagaaaatggtccct-taaatataccaacatttaattttagttcctctaaaatattctttaggcttttggtctctctaaaa-ttttcattt 32186625  T
Q  247 atgaaattagtccc 260  Q
    ||||||||| ||||    
T  32186624 atgaaattaatccc 32186611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 403
Target Start/End: Original strand, 17431112 - 17431208
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttactta 403  Q
    ||||| ||| |||| |||| |||||||||||| ||||| ||||||||||| |||| |||||| |||||||| |||||||||  ||||||||||||||    
T  17431112 ttcatggatgaaaatttttggagggaccaaaagcctaaaaaatattttagggggactaaaatcaaatgttgatatatttagatggaccatttactta 17431208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 32185283 - 32185391
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    ||||||| || |||||||||| ||||||||||||| |||| ||||||||||  |||||| |||| ||||||| |||||| |||||||||||||||   ||    
T  32185283 gttaaatgagtaaatagtccctctaaatataccaacatttgattttagtccctctaaaa-attc-ttaggttgttggtctctctaaaatttttcaatcat 32185380  T
Q  249 gaaattagtcc 259  Q
    |||||||||||    
T  32185381 gaaattagtcc 32185391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 33752327 - 33752412
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtcc 259  Q
    |||||||| |||||||| |||||||||| ||||||||||||||| || |||| || ||| ||||||||| ||||||||||||||||||    
T  33752327 taaatatatcaatatttgattttagtccccctaaaatattcttt-ggcttttagt-cctttaaaattttccatctatgaaattagtcc 33752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 7513621 - 7513527
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||| | ||||||| ||||| ||||||||||  |  ||||||||||||||||||||||||||| ||  | |||||||||| ||||||    
T  7513621 aaaaattttagatgaaccaaaagcctaaaaaatattttaaggtaattaaaattaaatgttggtatatttagaggagctatttacttatttaaccc 7513527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 412
Target Start/End: Complemental strand, 17430790 - 17430712
Alignment:
Q  334 caaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccca 412  Q
    ||||| |||||| ||||||||||||||| |||||| |||||||||||||||||| ||||| ||||| |||  |||||||    
T  17430790 caaaagcctaaggaatattttagagggactaaaatcaaatgttggtatatttagagggacaatttatttacttaaccca 17430712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 17615621 - 17615710
Alignment:
Q  171 ctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||||||||  ||||||| |||||||||||||||||||||   ||||| |||| ||||| | |||||||| ||||||||||||||||||||    
T  17615621 ctaaatatatgaatatttgattttagtcctcctaaaatatatcttaggcttttagtccc-ccaaaattttccatctatgaaattagtccct 17615710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 28687623 - 28687692
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattta 386  Q
    |||||||||||||||||||||| ||||| |||||||||||||  | |||||| |||||||| ||||||||    
T  28687623 aaaaattttagagggaccaaaaccctaaaaaatattttagagtaactaaaatcaaatgttgatatattta 28687692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 401
Target Start/End: Complemental strand, 32185373 - 32185291
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttact 401  Q
    ||||||||||||| |||||| | |||||||| |  |||||||||| |||||| |||||||||||||||||| ||||| |||||||    
T  32185373 aaaaattttagagagaccaacaacctaagaatt--tttagagggactaaaatcaaatgttggtatatttagagggactatttact 32185291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 16854882 - 16854763
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatcta 247  Q
    ||||||||||| ||||||||  |||||||| | ||| |||  ||||||||||  ||||||||||| |||| |||||| | ||| ||||| |||||||| |    
T  16854882 ggttaaataagtaaatagtcgtcctaaatagatcaacattaaattttagtccgtctaaaatattccttagttttttgattcctttaaaaattttcatcca 16854783  T
Q  248 tgaaattagtccctgctcta 267  Q
    | ||||||||| ||| ||||    
T  16854782 taaaattagtctctgatcta 16854763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 28687486 - 28687581
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    |||||||||||| |||| |||||| ||   ||||||||||| ||| | ||||||||| ||||||| ||||||| | |||||||||||| |||||||    
T  28687486 taaatataccaacatttaattttaatctctctaaaatattccttatgcttttggtccatctaaaaattttcatatgtgaaattagtccgtgctcta 28687581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 33752791 - 33752675
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||  ||||   |||||||| ||| |||| |||||||||  |||||||||||||||||| ||||||| || || |||||||  ||    
T  33752791 tagggttaaataagtaaacggtccttttaaatatatcaacatttgattttagtctccctaaaatattctttaggcttttggttcc-ct-aaattttctat 33752694  T
Q  245 ctatgaaattagtccctgc 263  Q
    |||| ||||||||||||||    
T  33752693 ctattaaattagtccctgc 33752675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 34665003 - 34665069
Alignment:
Q  170 cctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaa 236  Q
    ||||||||||| || |||| |||||||||| | ||||||||||||||||||||||  ||||||||||    
T  34665003 cctaaatatactaacatttgattttagtccccttaaaatattctttaggtttttgacccctctaaaa 34665069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 54164560 - 54164466
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||| ||||||||| ||||| | ||||||||   ||| |||||| ||||||||||||||||||   ||| |||||||||| ||||||    
T  54164560 aaaaattttagatggaccaaaagcctaaaatatattttatgaggactaaaatcaaatgttggtatatttagaacgactatttacttatttaaccc 54164466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 30941583 - 30941471
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    |||||| |||||||||| ||||| || | |||||||||| ||  ||| ||||||||| ||||||||||||  | |||||||  || ||||||||| ||||    
T  30941583 ttttagagttaaataagtaaataatctctctaaatatactaac-tttgattttagtcttcctaaaatatttatgaggttttatgttcctctaaaaatttt 30941485  T
Q  242 catctatgaaatta 255  Q
    ||||||| ||||||    
T  30941484 catctataaaatta 30941471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 258
Target Start/End: Original strand, 17430713 - 17430824
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    ||||||| |||  |||| ||||| ||||||||||||| |||| ||||||||||  ||||||||||| ||||| ||||| || ||  |||||||| |||      
T  17430713 gggttaagtaaataaattgtccctctaaatataccaacatttgattttagtccctctaaaatattccttaggcttttgatctcttcaaaattttccattc 17430812  T
Q  247 atgaaattagtc 258  Q
    | ||||||||||    
T  17430813 aagaaattagtc 17430824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 411
Target Start/End: Original strand, 34665148 - 34665234
Alignment:
Q  325 tagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||| ||| ||||| ||||| ||||||||||| | || |||||| ||||||||||||||||| |   ||||||||||||| ||||||    
T  34665148 tagaaggaacaaaagcctaaaaaatattttagggtgactaaaatcaaatgttggtatatttaatattaccatttacttatttaaccc 34665234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 409
Target Start/End: Complemental strand, 53343796 - 53343707
Alignment:
Q  319 aaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    ||||||||||||  |||||| ||||||||||||||||  | || |||||| ||| |||||||||||||   ||||||||||||||| ||||    
T  53343796 aaattttagaggacccaaaa-cctaagaaatattttaacgagactaaaatcaaacgttggtatatttaagaggaccatttacttatttaac 53343707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 410
Target Start/End: Complemental strand, 17250556 - 17250463
Alignment:
Q  318 aaaattttagaggga-ccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    |||||||| |||||| ||||||  |||||||||||||||  || | |||||| ||||||| |||||||| |  ||||||||||||||| |||||    
T  17250556 aaaattttcgagggaaccaaaaatctaagaaatattttaagggaaataaaatcaaatgtttgtatatttggaaggaccatttacttatttaacc 17250463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 31078953 - 31079008
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtcc 228  Q
    ||||||||||||| ||| |||||||||| |||||||||||| ||||| |||||||||    
T  31078953 taaatataccaat-tttaattttagtccccctaaaatattcattaggcttttggtcc 31079008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 17616058 - 17615971
Alignment:
Q  174 aatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||||| ||| |||| |||||||| | |||||| |||| |||||||||||| || || ||| |||||||||| | ||||| |||||||    
T  17616058 aatatatcaacatttaattttagttcccctaaattattttttaggtttttgatctctttaatatttttcatccacgaaatcagtccct 17615971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 7513726 - 7513663
Alignment:
Q  202 ctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    |||||||||||||||| |||| ||||  | |||||||||| || ||||||||||||| ||||||||    
T  7513726 ctaaaatattctttagattttgggtc--tttaaaattttttatttatgaaattagtctctgctcta 7513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 2514355 - 2514310
Alignment:
Q  350 attttagagggattaaaattaaatgttggtatatttagtgggacca 395  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||||    
T  2514355 attttagagggattaaaatgaaaagttggtatatttatagggacca 2514310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 5e-58; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 150 - 413
Target Start/End: Original strand, 31198302 - 31198555
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatg 249  Q
    ||||||||| ||||||| ||| |||||||||||| |||| ||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  31198302 ttaaataagtaaatagttccc-taaatataccaacatttgattttagtccttctaaaatattttttaggttattgatccctctaaaatttttcatttatg 31198400  T
Q  250 aaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaat 349  Q
    |||||| ||||||||||| ||||||||||||| |||||||  |||||||        ||||| ||| ||||||||||||||| |||||| ||||||||||    
T  31198401 aaattaatccctgctctaatgtaatactcaatatagagcagggactaat--------ttcatagatgaaaaattttagaggg-ccaaaagcctaagaaat 31198491  T
Q  350 attttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |||||||  | | |||||| |||||||||||||||||  ||||| |||||||||| ||||||||    
T  31198492 attttaggagaactaaaatcaaatgttggtatatttaaagggactatttacttatttaacccaa 31198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 144 - 411
Target Start/End: Complemental strand, 19105513 - 19105256
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||| | |||| ||||||||||| ||||||||||||||||| ||||||    
T  19105513 ttagggttaaataagtaaatagtccccctaaatataccaacttttgattttagtccccttaaactattctttaggcttttggtccctctaaaa-ttttca 19105415  T
Q  244 tctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatccta 343  Q
    | |||||||||||||  |||||||||||||||||||||||||||||| |||||||        |||||  || ||||||| |||||||||||||| ||||    
T  19105414 tttatgaaattagtctatgctctagtgtaatactcaatgtagagcattgactaat--------ttcataaatgaaaaattatagagggaccaaaagccta 19105323  T
Q  344 agaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |  ||||||||||| ||| ||||||  |||||| |||||||||   ||| | ||||||||| ||||||    
T  19105322 aagaatattttaga-ggactaaaatcgaatgttagtatatttatgcggatcttttacttatttaaccc 19105256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 404
Target Start/End: Original strand, 31172202 - 31172424
Alignment:
Q  173 aaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgta 272  Q
    ||||||| ||| |||| |||||| ||||  ||||||||| |||||  ||||| |||||||||| |||||||| ||||||||||||| |||||||||||||    
T  31172202 aaatatatcaacatttgattttactccta-taaaatattttttagacttttgatccctctaaagtttttcatttatgaaattagtctctgctctagtgta 31172300  T
Q  273 atactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaa 372  Q
    |||||||||||||||||  | ||||||       ||| | ||| |||| ||||||||||||||||| ||||| |||||||||||  |||||||||| |||    
T  31172301 atactcaatgtagagcaaggtctaatt-------ttc-tagatgaaaatttttagagggaccaaaaacctaaaaaatattttaggaggattaaaatcaaa 31172392  T
Q  373 tgttggtatatttagtgggaccatttacttat 404  Q
    |||| |||||||||  |||| |||||||||||    
T  31172393 tgtttgtatatttaaagggatcatttacttat 31172424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 140 - 410
Target Start/End: Original strand, 9686285 - 9686540
Alignment:
Q  140 tattttagggttaaataagcaaatagtccccctaaatataccaatattttatttt-agtcctcctaaaatattctttaggtttttggtccctctaaaatt 238  Q
    |||||| |||||||||||| ||||| || |||||||||||| ||||||| ||||| ||||| |  |||||||| |||| | ||||||||  |||||||||    
T  9686285 tatttttgggttaaataagtaaataatctccctaaatatactaatatttgatttttagtccccaaaaaatattttttaagcttttggtcgttctaaaatt 9686384  T
Q  239 tttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaa 338  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||||                || |||||||||||| |||||||||    
T  9686385 tttcatttatgaaattagtctctgctctagtgtaatactcaatgtagagcagggactaa----------------atgaaaaattttagaaggaccaaaa 9686468  T
Q  339 tcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
     |||||  |||||||||  |||| |||||| |||| ||| |||||||||  |||| |||||||||| |||||    
T  9686469 gcctaaataatattttatggggactaaaatcaaatattgatatatttaggaggactatttacttatttaacc 9686540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 31198558 - 31198434
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    |||| |||||||||||| ||||||||||  |||||||||||| |||| |||||||| |||||||||||||  ||||| |||||| |||||||||||||||    
T  31198558 tttttgggttaaataagtaaatagtccctttaaatataccaacatttgattttagttctcctaaaatatttcttaggcttttgg-ccctctaaaattttt 31198460  T
Q  242 catctatgaaattagtccctgctcta 267  Q
    ||||||||||||||||||||||||||    
T  31198459 catctatgaaattagtccctgctcta 31198434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 271
Target Start/End: Original strand, 6036544 - 6036672
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    ||||| |||||||||| ||||||| |||||||||||| ||| |||| |||||||||| | ||||||| | ||||||||||||| | ||||||||||||||    
T  6036544 tttagagttaaataagtaaatagttcccctaaatatatcaacatttgattttagtccccttaaaatagtttttaggtttttggcctctctaaaatttttc 6036643  T
Q  243 atctatgaaattagtccctgctctagtgt 271  Q
    || ||||||||||||| || |||||||||    
T  6036644 atttatgaaattagtctctactctagtgt 6036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 192 - 414
Target Start/End: Complemental strand, 8130089 - 8129876
Alignment:
Q  192 tttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcata 291  Q
    |||||||| | |||||||||  ||| |  ||||||| ||||||||||||| || |||||||||||||  ||||||||||||||| ||||||||||||| |    
T  8130089 tttagtccccataaaatatttgttatgcatttggtctctctaaaattttttatttatgaaattagtcattgctctagtgtaatattcaatgtagagcaga 8129990  T
Q  292 gactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtggg 391  Q
    ||| |||        |||||  || ||| |||||||||| |||||||  | ||||||||||||| | |||||||||| ||||||||||| |||||| | |    
T  8129989 gacgaat--------ttcataaatgaaagattttagaggaaccaaaagtcaaagaaatattttaaaaggattaaaatcaaatgttggtagatttag-gag 8129899  T
Q  392 accatttacttatgtaacccaat 414  Q
    | ||||||||||| |||||||||    
T  8129898 atcatttacttatttaacccaat 8129876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 21657553 - 21657401
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc--t 246  Q
    |||||||||| |||||||| |||||||||||| || |||| || |||| || | |||||||||| ||| | ||||| |||||||||||||||| |||  |    
T  21657553 gttaaataagtaaatagtctccctaaatatactaacatttgatattagcccccttaaaatattccttacgcttttgatccctctaaaatttttaatctat 21657454  T
Q  247 atgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    ||||||||||| || | |||| ||||||||||||||||||||| |||||||||    
T  21657453 atgaaattagtgcccgttctaatgtaatactcaatgtagagcagagactaatt 21657401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 144 - 411
Target Start/End: Complemental strand, 7760856 - 7760608
Alignment:
Q  144 ttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttca 243  Q
    ||||| ||||||||| ||||||| |||||||||||||||| |||| ||||||||||   |||||||||  ||||| |||||||||||| |||| ||||||    
T  7760856 ttaggattaaataagtaaatagttcccctaaatataccaacatttgattttagtccctataaaatatttcttaggcttttggtccctccaaaaattttca 7760757  T
Q  244 tctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatccta 343  Q
    || |||||||||||||||           || |||||||||||||| || |||||        ||||| ||| || |||||| |||||||||||| ||||    
T  7760756 tccatgaaattagtccct-----------attctcaatgtagagcagaggctaat--------ttcatggatgaacaattttggagggaccaaaagccta 7760676  T
Q  344 agaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |  |||||||||| |||| |||||| | ||| ||||||||||||  |||  |||||||||| ||||||    
T  7760675 aagaatattttagggggactaaaatcatatgctggtatatttagaaggattatttacttatttaaccc 7760608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 12821179 - 12821292
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| |||||| ||||||||||||  ||| |||||| ||| ||||||||||| |||||| ||||||| ||||||||| |||||||||    
T  12821179 gggttaaataagtaaatggtccccttaaatataccaacgtttgattttaatccccctaaaatattttttaggcttttggttcctctaaaa-ttttcatct 12821277  T
Q  247 atgaaattagtccct 261  Q
    |||||||||||||||    
T  12821278 atgaaattagtccct 12821292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 29635235 - 29635348
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| |||| ||||||||||||||| ||| |||| |||||||||| |||||||||||| ||||  |||||||||||||||||||||||||      
T  29635235 gggttaaataagtaaatggtccccctaaatatatcaacatttgattttagtcc-cctaaaatattccttagacttttggtccctctaaaatttttcatac 29635333  T
Q  247 atgaaattagtccct 261  Q
    ||| |||||||||||    
T  29635334 atgtaattagtccct 29635348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 7760607 - 7760728
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||| |||  ||||||||||||  || | |||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||    
T  7760607 agggttaaataagtaaataatccttctaaatataccagcatatgattttagtccccctaaaatattctttaggcttttggtccctccaaaattgttcatc 7760706  T
Q  246 tatgaaattagtccctgctcta 267  Q
     |||||||||| | ||||||||    
T  7760707 catgaaattagcctctgctcta 7760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 9686540 - 9686444
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    ||||||||||| ||||||||| |||||||||| |||||||| |||||||||| | ||||||||| |||||| ||||||||| |||||||||||||||    
T  9686540 ggttaaataagtaaatagtcctcctaaatatatcaatatttgattttagtccccataaaatattatttaggcttttggtccttctaaaatttttcat 9686444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 12821272 - 12821176
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaat 414  Q
    ||||||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||| |||||||||||||  |||||||||||||||| |||||||||    
T  12821272 aaaattttagaggaaccaaaagcctaaaaaatattttagggggattaaaatcaaacgttggtatatttaaggggaccatttacttatttaacccaat 12821176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 3555360 - 3555458
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||  ||||| |||||||||||| ||| |||||    
T  3555360 ttttagggttaaataagcaaatggtccccctaaatataccaacatttgattttagtccccctaaaatatttcttagg-ttttggtccctccaaatttttt 3555458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 145 - 411
Target Start/End: Original strand, 19105254 - 19105510
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||   ||| | ||||||||| || |||  |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||    
T  19105254 tagggttaaataagtaaaagatccgcataaatatactaacattcgattttagtcctc-taaaatattctttaggcttttggtccctctataatttttcat 19105352  T
Q  245 ctatgaaattagtccctgctcta----gtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatc 340  Q
     |||||||||||||  |||||||    | ||| ||| |    ||||||||||||||||        |||||  ||  ||||||||||||||||||||| |    
T  19105353 ttatgaaattagtcaatgctctacattgagtattacac----tagagcatagactaat--------ttcataaat-gaaaattttagagggaccaaaagc 19105439  T
Q  341 ctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||  |||| ||||  |||| |||||| ||| |||||||||||||| ||||| |||||||||| ||||||    
T  19105440 ctaaagaatagtttaaggggactaaaatcaaaagttggtatatttagggggactatttacttatttaaccc 19105510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 31172433 - 31172311
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||| ||||||||| ||||  ||||  ||||||||| || |||| |||||| ||||||||||||||| |||||||||||||||||||||||| |||||||    
T  31172433 taggattaaataagtaaatgatccctttaaatatacaaacatttgattttaatcctcctaaaatattttttaggtttttggtccctctaaaaattttcat 31172334  T
Q  245 ctatgaaattagtccctgctcta 267  Q
    |||  ||||||| || |||||||    
T  31172333 ctagaaaattagaccttgctcta 31172311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 15329853 - 15329970
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatatt-ctttaggtttttggtccctctaaaattttt 241  Q
    |||||||||||||| | ||||||||||| |||||||||||| |||| |||||||||| || || ||||| ||| ||||||||||||| || |||| ||||    
T  15329853 tttagggttaaatatggaaatagtccccttaaatataccaacatttgattttagtcccccaaagatattacttaaggtttttggtccatccaaaaatttt 15329952  T
Q  242 catctatgaaattagtcc 259  Q
    |||||||||||| |||||    
T  15329953 catctatgaaataagtcc 15329970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 37081349 - 37081239
Alignment:
Q  147 gggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatct 246  Q
    |||||||||||| ||||| ||||| |||||||| |||  ||| |||||||||| || ||||||||| ||||||||||||||||||||||| ||||||| |    
T  37081349 gggttaaataagtaaatattcccc-taaatatatcaacgtttgattttagtcccccaaaaatattccttaggtttttggtccctctaaaa-ttttcattt 37081252  T
Q  247 atgaaattagtcc 259  Q
    |||||||||||||    
T  37081251 atgaaattagtcc 37081239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 3555459 - 3555365
Alignment:
Q  316 aaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||| ||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||||||||||||| |||||||||| ||||| ||||||    
T  3555459 aaaaaaatttggagggaccaaaa-cctaagaaatattttagggggactaaaatcaaatgttggtatatttagggggaccatttgcttatttaaccc 3555365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 29635328 - 29635234
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccca 412  Q
    ||||||||||||||||||||||  ||||| |||||||||| |||| |||||| |||||||| ||||||||| |||||||||||||||| |||||||    
T  29635328 aaaaattttagagggaccaaaagtctaaggaatattttag-gggactaaaatcaaatgttgatatatttagggggaccatttacttatttaaccca 29635234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 20165095 - 20164989
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| |||| |||  |||||||||||||| |||| ||||||||||  ||||||||||| ||||||||||| |||||||| ||||||  ||||||    
T  20165095 gttaaataaggaaatggtcttcctaaatataccaacatttgattttagtccctctaaaatattcattaggtttttgatccctctacaattttctatctat 20164996  T
Q  249 gaaatta 255  Q
    |||||||    
T  20164995 gaaatta 20164989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 7760749 - 7760846
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||| ||| |||| |||| |||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||||| || || ||||||||||    
T  7760749 ttcatggatgaaaatttttggagggaccaaaagcctaagaaatattttatagggactaaaatcaaatgttggtatatttaggggaactatttacttat 7760846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 23797202 - 23797276
Alignment:
Q  313 gataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||| |||||| |||||||| |||||||||    
T  23797202 gataaaaagttttagagggaccaaaaatctaagaaatattttagagggactaaaatcaaatgttgatatatttag 23797276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 20164620 - 20164733
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatcta 247  Q
    ||||||||||| |||| ||||||  ||||||||||| |||| ||||||||| |  |||||| ||| ||| |||||||||||||| ||||||||||||  |    
T  20164620 ggttaaataagtaaatggtcccctaaaatataccaacatttgattttagtcattttaaaattttccttaagtttttggtccctccaaaatttttcattca 20164719  T
Q  248 tgaaattagtccct 261  Q
    |||||||| |||||    
T  20164720 tgaaattaatccct 20164733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 21657292 - 21657417
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||||||||||||| |||| |||| |||||||||| ||| |||| | |||||  | | |||||||||||||||  ||||||| | || |||| ||||    
T  21657292 ttttagggttaaataagtaaatggtcctcctaaatatatcaacatttaactttagctcccttaaaatattctttagacttttggttcttcaaaaaatttt 21657391  T
Q  242 catctatgaaattagtccctgctcta 267  Q
    ||| ||||||||||||| ||||||||    
T  21657392 catttatgaaattagtctctgctcta 21657417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 35303853 - 35303966
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||  | || ||||||| ||||||| |||||||| |||||||| | ||| ||||||| || ||||||||||||||||||||| |||  |||    
T  35303853 agggttaaataattacatggtcccccgaaatatatcaatatttaattttagttccccttaaatatttttgaggtttttggtccctctaaaactttcaatc 35303952  T
Q  246 tatgaaattagtcc 259  Q
     |||||||||||||    
T  35303953 catgaaattagtcc 35303966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 409
Target Start/End: Original strand, 20164993 - 20165095
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgt 406  Q
    ||||| |||| |||||| |||||||| ||||| |||||  ||||||||||||||| |||||| ||||||||||||||||||   |||||||| ||||| |    
T  20164993 ttcatagatagaaaattgtagagggatcaaaaacctaatgaatattttagagggactaaaatcaaatgttggtatatttaggaagaccatttccttattt 20165092  T
Q  407 aac 409  Q
    |||    
T  20165093 aac 20165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 23797298 - 23797180
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||| | |||||||  ||||||||||| ||| |||| ||||||||||  ||||||||||  |||| |||||||||||||||||| |||| ||| ||    
T  23797298 gttaaatatgtaaatagtttccctaaatatatcaacatttgattttagtccctctaaaatatttcttagatttttggtccctctaaaactttttatccat 23797199  T
Q  249 gaaattagtccctgctcta 267  Q
     ||||| ||| ||||||||    
T  23797198 taaattggtctctgctcta 23797180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 29635736 - 29635645
Alignment:
Q  170 cctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||||||||| ||| |||| |||||||| ||||||||||||| |||| | |||||||||||| ||| |||| |||| || ||||||||||||    
T  29635736 cctaaatatatcaacatttgattttagttctcctaaaatattttttaagattttggtccctccaaagttttacatccataaaattagtccct 29635645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 404
Target Start/End: Complemental strand, 31198392 - 31198306
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||||||||||||||| ||| | ||||| |||||||||||| ||| |||||| |||||||||||||||||| || || ||||||||||    
T  31198392 aaaaattttagagggatcaataacctaaaaaatattttagaaggactaaaatcaaatgttggtatatttag-ggaactatttacttat 31198306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 37081257 - 37081350
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccca 412  Q
    ||||||||||||||||||||| |||||| |||||||| | |||| |||||| ||| |||| ||||||||| ||||  |||||||||| |||||||    
T  37081257 aaaattttagagggaccaaaaacctaaggaatatttttgggggactaaaatcaaacgttgatatatttag-gggaatatttacttatttaaccca 37081350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 403
Target Start/End: Original strand, 47741036 - 47741105
Alignment:
Q  334 caaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttactta 403  Q
    ||||| ||||||||||||||| | |||| | ||||||||||||||||||||||  |||||||||||||||    
T  47741036 caaaagcctaagaaatatttttgggggactgaaattaaatgttggtatatttatggggaccatttactta 47741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 35054543 - 35054445
Alignment:
Q  313 gataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||| | ||||||||| |||||||  ||||  ||||||||| |||||| ||||||||||||| ||||||||||  | || |||||||||| ||||||    
T  35054543 gataaatatttttagaggaaccaaaagtctaaagaatattttaaagggatcaaaattaaatgttagtatatttagaagaactatttacttatttaaccc 35054445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 317 - 410
Target Start/End: Complemental strand, 20164713 - 20164620
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    ||||||||| |||||||||||| | |||| || |||||| |  || |||||| ||||||||||||||||   |||||||||||||||| |||||    
T  20164713 aaaaattttggagggaccaaaaacttaaggaaaattttaaaatgactaaaatcaaatgttggtatattttaggggaccatttacttatttaacc 20164620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 409
Target Start/End: Complemental strand, 6036642 - 6036550
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    ||||||||||||| | |||||| ||||| || |||||||  |||| |||||| |||||||| ||||||||| || || |||||||||| ||||    
T  6036642 aaaaattttagagaggccaaaaacctaaaaactattttaaggggactaaaatcaaatgttgatatatttaggggaactatttacttatttaac 6036550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 413
Target Start/End: Original strand, 15330014 - 15330105
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    |||| ||||||  |||| ||||||||||| ||||   ||||||||||||||||| | |||||||||  ||||||| ||||||| ||||||||    
T  15330014 ttttggagggataaaaagcctaagaaataatttaagaggattaaaattaaatgtggatatatttaggaggaccatatacttatttaacccaa 15330105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 35304285 - 35304194
Alignment:
Q  168 cccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtcc 259  Q
    |||||||||||||||| | || |||||||||| |||||||||||  ||||  |||||||| |||  ||||||| |||| ||||||| |||||    
T  35304285 cccctaaatataccaacaattgattttagtccgcctaaaatattagttagtcttttggtctctccgaaattttccatcaatgaaatcagtcc 35304194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 15330109 - 15329991
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    ||||| |||||||||||| | || |||| |||||||||| | | |||| |||||| ||||| |||| ||||  ||||| ||||  |||||| ||||  ||    
T  15330109 atttttgggttaaataagtatatggtcctcctaaatatatccacatttaattttaatcctcttaaattatttcttaggctttttatccctccaaaaaatt 15330010  T
Q  241 tcatctatgaaattagtcc 259  Q
    ||||| |||||||||||||    
T  15330009 tcatccatgaaattagtcc 15329991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 35054441 - 35054534
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaa 236  Q
    |||||||||||||||| ||||||| |  |||||||||| || |||| |||||  |||   |||||||||||||||  ||||||| |||||||||    
T  35054441 tttagggttaaataagtaaatagttcttctaaatatactaacatttaattttgatccctttaaaatattctttagacttttggttcctctaaaa 35054534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 35303943 - 35303854
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||||||| ||| | |||||||| || || | ||||||||||| ||| ||||||| | |||||||| || |||| ||||||    
T  35303943 ttttagagggaccaaaaacctcaaaaatatttaaggggaactaaaattaaatattgatatatttcgggggaccatgtaattatttaaccc 35303854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 8104649 - 8104765
Alignment:
Q  162 atagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    ||||| || ||||||||| ||| |||| |||| |||||   || |||||| |||||| |||| ||  |||||||||||| ||| ||| ||||||||||||    
T  8104649 atagttcctctaaatatatcaacatttgatttcagtccctttacaatattttttaggcttttagtatctctaaaattttacatttataaaattagtccct 8104748  T
Q  262 gctctagtgtaatactc 278  Q
     ||||||| || |||||    
T  8104749 actctagtatattactc 8104765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 409
Target Start/End: Original strand, 21657461 - 21657553
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    |||||||||||||||| ||||| | |||| |||||||||  |||  ||| || ||||||| |||||||||| | ||| |||||||||| ||||    
T  21657461 aaaaattttagagggatcaaaagcgtaaggaatattttaagggggctaatatcaaatgttagtatatttagggagactatttacttatttaac 21657553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 395
Target Start/End: Original strand, 2850646 - 2850724
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggacca 395  Q
    |||||||||| |||||| ||||  | ||| || ||||||||||||||||||| ||| |||| ||||||||  |||||||    
T  2850646 aaaaattttatagggactaaaaatcgaaggaaaattttagagggattaaaatgaaaagttgatatatttatagggacca 2850724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 47741118 - 47741036
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttg 224  Q
    ||||| |||||| |||| |||| |||||| |||||||||||| |||| |||| ||||| || ||||||||  ||||| |||||    
T  47741118 ttttaaggttaattaagtaaatggtccccataaatataccaacatttaatttcagtcccccaaaaatatttcttaggcttttg 47741036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 18881110 - 18881190
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatata--ccaatattttattttagtcctcctaaaatattctttaggttttt 223  Q
    |||||| |||||||  |||||||||| ||||||||  |||| |||| |||||||| |   |||||||||||||||||||||    
T  18881110 tagggtaaaataagtgaatagtccccataaatatataccaacatttgattttagttcctttaaaatattctttaggttttt 18881190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 387
Target Start/End: Original strand, 29635666 - 29635735
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    |||| ||| |||||||||||||| ||| |||||||||||  | | |||||| |||||||| |||||||||    
T  29635666 aaaactttggagggaccaaaatcttaaaaaatattttaggagaactaaaatcaaatgttgatatatttag 29635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 146 - 299
Target Start/End: Complemental strand, 64082 - 63929
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    |||||||||| || |||||||| ||||||||||||||| |||| |||||||| | ||||||||||| ||||||||||| |||||||| ||||||||||||    
T  64082 agggttaaatcagtaaatagtctccctaaatataccaacatttaattttagttcccctaaaatattatttaggtttttagtccctctcaaatttttcatc 63983  T
Q  246 tatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaatt 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  63982 tatgaaattagtccctgctctagtgtaatactcaatgtagagcagggactaatt 63929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 146 - 411
Target Start/End: Original strand, 63826 - 64081
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||| | |  |||||||||| || |||| |||||||||| | |||||| |||| ||||||||||||| || |||||||||||| |    
T  63826 agggttaaataagaaaatactacttctaaatatac-aacatttgattttagtcc-cataaaattttctataggtttttggtctctttaaaatttttcaac 63923  T
Q  246 tatgaaattagtccctgctcta----gtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcc 341  Q
    ||| ||||||||||||||||||    | ||| ||| |    |||||||  |||||||        ||||| ||| |||||||| |||||||| |||| ||    
T  63924 tataaaattagtccctgctctacattgagtattacac----tagagcagggactaat--------ttcatagatgaaaaatttgagagggactaaaaacc 64011  T
Q  342 taagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||  |||||||||| || | ||||||||||||||||||||||||| | ||| ||||||| || ||||||    
T  64012 taaataatattttaggggaactaaaattaaatgttggtatatttagggagactatttactgatttaaccc 64081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 3e-41; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 146 - 411
Target Start/End: Complemental strand, 4304404 - 4304143
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttgg---tccctctaaaatttt-t 241  Q
    ||||||||||||| ||||| || ||||||||||||||| |||| ||||||||||  ||||||||||| |||| |||||||   |||||||||||     |    
T  4304404 agggttaaataagtaaataatctccctaaatataccaacatttgattttagtccctctaaaatattcattagatttttggcggtccctctaaaaaaaaat 4304305  T
Q  242 catctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcc 341  Q
     || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||        ||||  ||  ||||||||||| ||||||||| |     
T  4304304 tatttatgaaattagtctctgctctagtgtaatactcaatgtagagcatggactaatt--------tcatatatgtaaaattttagaaggaccaaaagct 4304213  T
Q  342 taagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||||||  ||| |||||| |||||||||||||||||  ||||| ||||| |||| ||||||    
T  4304212 taagaaatattttaggaggactaaaatcaaatgttggtatatttaaggggacgatttatttatttaaccc 4304143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 150 - 387
Target Start/End: Original strand, 4475108 - 4475335
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatg 249  Q
    ||||||||| ||| ||||| |||||||||||||| |||| |||||| | | |||||||||||||||||| ||||  | ||| ||||| ||||||||||||    
T  4475108 ttaaataagtaaaaagtcctcctaaatataccaacatttgattttaattcccctaaaatattctttagggttttaat-cctttaaaaattttcatctatg 4475206  T
Q  250 aaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaattttagagggaccaaaatcctaagaaat 349  Q
    |||||||| || |||||||||||||| ||||||||||| | | ||||||        ||||| |||||||||||||||| ||| ||||| |||||  ||     
T  4475207 aaattagt-ccagctctagtgtaataatcaatgtagagaagatactaat--------ttcatagataaaaaattttagaaggatcaaaaacctaaagaaa 4475297  T
Q  350 attttagagggattaaaattaaatgttggtatatttag 387  Q
    |||||| || ||||||||| |||||||| |||||||||    
T  4475298 attttaaagtgattaaaatcaaatgttgatatatttag 4475335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 4304138 - 4304263
Alignment:
Q  142 ttttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaattttt 241  Q
    ||||||||||||||||  |||| |||||| |||||||||||| |||| ||||||||||||||||||||||  ||| | ||||||||| |||||||||||     
T  4304138 ttttagggttaaataaataaatcgtccccttaaatataccaacatttgattttagtcctcctaaaatatttcttaagcttttggtccttctaaaatttta 4304237  T
Q  242 catctatgaaattagtccctgctcta 267  Q
    ||| |||||||||||||| |||||||    
T  4304238 catatatgaaattagtccatgctcta 4304263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 30173707 - 30173598
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatcta 247  Q
    ||||||||||| |||||||  |||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||| |||||||||||||||  |||||    
T  30173707 ggttaaataagaaaatagtttccctaaatataccaatatttgattttagtccccctaaaattttctttaggcttttgatccctctaaaattttatatcta 30173608  T
Q  248 tgaaattagt 257  Q
    ||||||||||    
T  30173607 tgaaattagt 30173598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 146 - 289
Target Start/End: Complemental strand, 32619043 - 32618900
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| ||||||| |  ||||||||| ||| |||| ||||||||| | |||||||||| ||||| ||||| || |||||||||||||||||     
T  32619043 agggttaaataagtaaatagttcatctaaatatatcaacatttgattttagtctttctaaaatattttttagatttttagttcctctaaaatttttcatt 32618944  T
Q  246 tatgaaattagtccctgctctagtgtaatactcaatgtagagca 289  Q
    ||| |||||| | | | |||||||||||||||||||||||||||    
T  32618943 tataaaattaattcatactctagtgtaatactcaatgtagagca 32618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 318 - 410
Target Start/End: Complemental strand, 30430363 - 30430271
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacc 410  Q
    ||||||||||||||||||||| |||||  ||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||| |||||    
T  30430363 aaaattttagagggaccaaaagcctaaagaatattttagaggaactaaaatcaaatgttggtatatttagagggaccatttacttatttaacc 30430271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 45405162 - 45405045
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    |||||| |||||||||||  ||  |||||| ||||||||| || |||| |||||||||| |||||||||||||||||| |||| ||||||| ||||||||    
T  45405162 attttatggttaaataagttaactgtccccttaaatatactaacatttgattttagtccccctaaaatattctttaggcttttagtccctccaaaatttt 45405063  T
Q  241 tcatctatgaaattagtcc 259  Q
    | |||||||||||||||||    
T  45405062 t-atctatgaaattagtcc 45405045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 30172069 - 30172181
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| |||| ||||||||||||||| ||| |||| |||||||||| | ||||||||||||||||||||||||   |  ||||||||||||    
T  30172069 tagggttaaataagtaaatggtccccctaaatatatcaacatttgattttagtccccttaaaatattctttaggtttttggt-tttacaaaatttttcat 30172167  T
Q  245 ctatgaaattagtc 258  Q
    | ||||||||||||    
T  30172168 ccatgaaattagtc 30172181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 30430271 - 30430363
Alignment:
Q  148 ggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    ||||||||||| |||| ||||| ||||||||||||| |||| |||||||| |  ||||||||||||||||| |||||||||||||||||||||    
T  30430271 ggttaaataagtaaatggtccctctaaatataccaacatttgattttagttcctctaaaatattctttaggcttttggtccctctaaaatttt 30430363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 28725770 - 28725656
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatata---ccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    ||||||||||||| |||| |||||||||||||||   |||| |||| ||||||||| ||| ||||||||| |||||||||||||||||| ||||  ||||    
T  28725770 agggttaaataagtaaatggtccccctaaatataataccaacatttgattttagtc-tcccaaaatattcattaggtttttggtccctccaaaaaatttc 28725672  T
Q  243 atctatgaaattagtc 258  Q
    ||| ||||||||||||    
T  28725671 atccatgaaattagtc 28725656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 318 - 409
Target Start/End: Complemental strand, 2928187 - 2928096
Alignment:
Q  318 aaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaac 409  Q
    |||||||| |||||||||||| |||||| || |||||||||||| || ||| ||||||||||||||||||  ||||||||||||||| ||||    
T  2928187 aaaattttggagggaccaaaagcctaaggaaaattttagagggactagaatcaaatgttggtatatttaggaggaccatttacttatttaac 2928096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 145 - 260
Target Start/End: Complemental strand, 6931198 - 6931083
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| ||||||||| | ||||||||| || |||| ||||||||||   ||||| |||  ||||||||||| || ||||||||||||||||    
T  6931198 tagggttaaataagtaaatagtcctcttaaatatactaacatttgattttagtccctttaaaacatttcttaggtttttgatctctctaaaatttttcat 6931099  T
Q  245 ctatgaaattagtccc 260  Q
     | |||||||||||||    
T  6931098 ttttgaaattagtccc 6931083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 2928096 - 2928206
Alignment:
Q  149 gttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctat 248  Q
    |||||||||| |||| |||| |||||||||||||| |||| ||| ||||||  ||||||| ||| ||||| |||||||||||| |||||||| |||  ||    
T  2928096 gttaaataagtaaatggtcctcctaaatataccaacatttgattctagtccctctaaaattttccttaggcttttggtccctccaaaattttccattcat 2928195  T
Q  249 gaaattagtcc 259  Q
    |||||||||||    
T  2928196 gaaattagtcc 2928206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 4475363 - 4475249
Alignment:
Q  143 tttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttc 242  Q
    ||||||||||||| || ||||||| | |||||||||| ||| |||| |||||| ||    |||||| ||||||||||||||| ||| ||||||||||||     
T  4475363 tttagggttaaattagaaaatagtgctcctaaatatatcaacatttgattttaatcactttaaaattttctttaggtttttgatccttctaaaatttttt 4475264  T
Q  243 atctatgaaattagt 257  Q
    |||||||||||||||    
T  4475263 atctatgaaattagt 4475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 43907976 - 43907867
Alignment:
Q  145 tagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||| ||||  ||||  ||||||||| ||||||| |||||||||| ||||||||||| ||||||||||| || |||  ||||||||||||    
T  43907976 tagggttaaataagtaaatgatccct-taaatatactaatatttgattttagtccccctaaaatattttttaggttttttgttccttcaaaatttttcat 43907878  T
Q  245 ctatgaaatta 255  Q
    | || ||||||    
T  43907877 ccataaaatta 43907867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 44094249 - 44094175
Alignment:
Q  314 ataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatg-ttggtatatttag 387  Q
    |||||| |||||| ||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  44094249 ataaaatattttaaagggaccaaaagcctaagaaatattttagaaggattaaaatcaaatgtttggtatatttag 44094175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 10821868 - 10821941
Alignment:
Q  185 attttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtc 258  Q
    ||||||||||||||  | ||||||||| |||||| |||||||||||||||||  ||||||||||||||||||||    
T  10821868 attttattttagtcaccgtaaaatattttttaggcttttggtccctctaaaaaatttcatctatgaaattagtc 10821941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 6931102 - 6931196
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||| || ||||| |||||||||| ||||| ||||| |||||| ||||||| |||||||||   |||| |||||||||| ||||||    
T  6931102 aaaaattttagagagatcaaaaacctaagaaatgttttaaagggactaaaatcaaatgttagtatatttaagaggactatttacttatttaaccc 6931196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 34502699 - 34502626
Alignment:
Q  314 ataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||| |||||||||||||| |||| ||||| |||||||||| ||||| |||||| |||||||| |||||||||    
T  34502699 ataaacaattttagagggacgaaaagcctaaaaaatattttatagggactaaaatcaaatgttgatatatttag 34502626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 332 - 411
Target Start/End: Complemental strand, 30172150 - 30172071
Alignment:
Q  332 accaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||| |||||  |||||||||  |||| |||||| |||||||| ||||||||| |||||||||||||||| ||||||    
T  30172150 accaaaaacctaaagaatattttaaggggactaaaatcaaatgttgatatatttagggggaccatttacttatttaaccc 30172071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 377
Target Start/End: Complemental strand, 10822007 - 10821864
Alignment:
Q  226 tccctctaaaatttttcatctatgaaattagtccctgctctagtgtaatactcaatgtagagcatagactaattaattgaattcatcgataaaaaatttt 325  Q
    ||||||||||||||||||| ||||||||||||| || || ||||||||||  |||||||| | |  |||||||        ||||| ||| |||  ||||    
T  10822007 tccctctaaaatttttcatatatgaaattagtctctactgtagtgtaatatccaatgtagggaagcgactaat--------ttcatagatgaaatttttt 10821916  T
Q  326 agagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttg 377  Q
    ||||||||||||| ||||| ||||||||||  | || |||||| ||||||||    
T  10821915 agagggaccaaaagcctaaaaaatattttacggtgactaaaataaaatgttg 10821864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 44094174 - 44094272
Alignment:
Q  170 cctaaatataccaat-attttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    ||||||||||||||  |||| |||||| |||| ||||||||||  ||||| ||||||||||| |||||| ||| ||  ||||||||||||||| |||||    
T  44094174 cctaaatataccaaacatttgattttaatccttctaaaatatttcttaggcttttggtccctttaaaatattttattcatgaaattagtccctactcta 44094272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 259
Target Start/End: Complemental strand, 44094391 - 44094286
Alignment:
Q  154 ataagcaaatagtccccctaaatataccaatattttattttagtcctcct-aaaatattctttaggtttttggtccctctaaaatttttcatctatgaaa 252  Q
    |||||||||| |||||| |||||||| ||| |||| ||||||||| |||| ||||||||  ||||| |||||||||||| ||||  ||| ||| ||||||    
T  44094391 ataagcaaatggtccccttaaatatatcaacatttgattttagtc-tcctgaaaatatttcttagggttttggtccctccaaaaaattttatccatgaaa 44094293  T
Q  253 ttagtcc 259  Q
    |||||||    
T  44094292 ttagtcc 44094286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 8896098 - 8896009
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||||| ||||| |||| |||||||||  |||||||||||||||| | |||||||| || |||||  ||||||  |||||||||||||||    
T  8896098 taaatacaccaacatttaattttagtctccctaaaatattctttaagcttttggtctctttaaaaaatttcattcatgaaattagtccct 8896009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 44094294 - 44094391
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||| |||||||  |||| |||||||||||| |||||||||||||||   | || |||||| |||||||| ||||||||  |||||||||| |||||    
T  44094294 ttcatggataaaattttttggagggaccaaaaccctaagaaatattttcaggagactaaaatcaaatgttgatatatttaaggggaccatttgcttat 44094391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 347 - 411
Target Start/End: Original strand, 4304339 - 4304403
Alignment:
Q  347 aatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    ||||||||||||||| |||||| |||||||||||||||||| | ||  |||||||||| ||||||    
T  4304339 aatattttagagggactaaaatcaaatgttggtatatttagggagattatttacttatttaaccc 4304403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 27614008 - 27614084
Alignment:
Q  141 attttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttag 217  Q
    ||||| |||||||  ||| ||||||| |||||||||||||||| |||| |||||||||  | |||||||||||||||    
T  27614008 atttttgggttaatcaagtaaatagttcccctaaatataccaacatttaattttagtctccataaaatattctttag 27614084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 30173604 - 30173684
Alignment:
Q  307 ttcatcgataaaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttag 387  Q
    ||||| |||| ||||||||||||||| ||||| |||||  || ||||||| |||| |||||| |||| |||||||||||||    
T  30173604 ttcatagatataaaattttagagggatcaaaagcctaaagaaaattttagggggactaaaatcaaatattggtatatttag 30173684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 32618948 - 32619042
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||||||| || ||||  |||| ||||||||||||  || |||||| |||||||| |||||||||  | || |||||||||| ||||||    
T  32618948 aaaaattttagaggaactaaaaatctaaaaaatattttagaaagactaaaatcaaatgttgatatatttagatgaactatttacttatttaaccc 32619042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 34502619 - 34502693
Alignment:
Q  164 agtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatt 238  Q
    ||||| |||||||||| ||| |||| ||||||||||   ||||||||| |||||| |||| ||||||||||||||    
T  34502619 agtcctcctaaatatatcaacatttgattttagtccctataaaatattttttaggcttttcgtccctctaaaatt 34502693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 404
Target Start/End: Original strand, 41993143 - 41993225
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||||||||| ||||| ||||| ||||||||||| | ||||||||| |||| ||| |||||||| || || | |||||||||    
T  41993143 ttttagagggatcaaaagcctaaaaaatattttagggagattaaaatcaaatattgatatatttaatgtgatcgtttacttat 41993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 41993207 - 41993118
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtccct 261  Q
    |||||||| |||||||| |||||| ||  ||||||||||| |||||| ||||| |||||||||||   ||||| |||  |||||||||||    
T  41993207 taaatatatcaatatttgattttaatctccctaaaatattttttaggcttttgatccctctaaaaaaattcatttatagaattagtccct 41993118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 30430720 - 30430672
Alignment:
Q  150 ttaaataagcaaatagtccccctaaatataccaatattttattttagtc 198  Q
    ||||||||| |||| ||||||||||||||| |||||||| |||||||||    
T  30430720 ttaaataagtaaatggtccccctaaatatatcaatatttaattttagtc 30430672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 25799514 - 25799579
Alignment:
Q  347 aatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    ||||||||| || || ||||||||||||||||||||||||| ||   ||||||||||| ||||||||    
T  25799514 aatattttaaagagactaaaattaaatgttggtatatttag-ggagtcatttacttatttaacccaa 25799579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 28725678 - 28725769
Alignment:
Q  322 ttttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtat---atttagtgggaccatttacttatgtaaccc 411  Q
    |||| |||||||||||| |||||  |||||||| | | || |||||| ||||||||||||   |||||| |||||||||||||||| ||||||    
T  28725678 ttttggagggaccaaaaacctaatgaatattttgg-gagactaaaatcaaatgttggtattatatttagggggaccatttacttatttaaccc 28725769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 29491413 - 29491476
Alignment:
Q  190 attttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaatta 255  Q
    |||||||||| |||||||||||||||| |||||||||  | | |||||||| || |||||||||||    
T  29491413 attttagtccccctaaaatattctttatgtttttggt--caccaaaattttccagctatgaaatta 29491476  T

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Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 34396939 - 34396901
Alignment:
Q  202 ctaaaatattctttaggtttttggtccctctaaaatttt 240  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34396939 ctaaaatattttttaggtttttggtccctttaaaatttt 34396901  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 43907881 - 43907974
Alignment:
Q  317 aaaaattttagagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaaccc 411  Q
    |||||||||  ||| || |||| ||||| ||||||||||| |||| |||||| |||| || |||||||||  |||| ||||||||||| ||||||    
T  43907881 aaaaattttgaaggaacaaaaaacctaaaaaatattttagggggactaaaatcaaatattagtatattta-agggatcatttacttatttaaccc 43907974  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 4475169 - 4475112
Alignment:
Q  347 aatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    |||||||||| || |||||||| ||||||||||||||||||  ||||  |||||||||    
T  4475169 aatattttaggggaattaaaatcaaatgttggtatatttaggaggactttttacttat 4475112  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 11096011 - 11096084
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    |||||||||| |  |||| |||| |||| |||||||||||| || |  ||||||||||||||||||||| ||||    
T  11096011 taaatatacccaatttttgttttggtccccctaaaatattcctttgaattttggtccctctaaaattttccatc 11096084  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 30430675 - 30430716
Alignment:
Q  363 taaaattaaatgttggtatatttagtgggaccatttacttat 404  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  30430675 taaaattaaatattgatatatttagggggaccatttacttat 30430716  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 35547251 - 35547198
Alignment:
Q  343 aagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccat 396  Q
    ||||||| ||||||||||| |||||| ||| |||||||||||||  ||||||||    
T  35547251 aagaaattttttagagggactaaaatgaaaagttggtatatttacagggaccat 35547198  T

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Target: scaffold0328 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 11683 - 11586
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtcc--ctctaaaatttttcatctatgaaattagtccctgctcta 267  Q
    ||||||||| ||||||| |||||||||   ||||||||||  |||||||||||||||  ||||||||| |||||||||||||||||||| || |||||    
T  11683 taaatatacgaatatttgattttagtcactctaaaatatttcttaggtttttggtccctctctaaaatatttcatctatgaaattagtctcttctcta 11586  T

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Target: scaffold0328; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 275
Target Start/End: Original strand, 11009 - 11137
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatc 245  Q
    ||||||||||||| |||||||   | ||||||||| || | || |||||||| |   ||||||||||||||| ||||| ||| ||||||| ||||| ||     
T  11009 agggttaaataagtaaatagtattc-taaatatactaacagttgattttagttcctttaaaatattctttagatttttagtctctctaaatttttttatt 11107  T
Q  246 tatgaaattagtccctgctctagtgtaata 275  Q
    |||||||||||||||| ||||||| |||||    
T  11108 tatgaaattagtccctcctctagtataata 11137  T

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Target: scaffold0328; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 326 - 413
Target Start/End: Original strand, 11623 - 11710
Alignment:
Q  326 agagggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatatttagtgggaccatttacttatgtaacccaa 413  Q
    ||||||||||||| ||||||||||||||||||| || |||||| |||| || |||||||||  |  |||||||| |||| ||||||||    
T  11623 agagggaccaaaaacctaagaaatattttagagtgactaaaatcaaatattcgtatatttaaagcaaccatttatttatttaacccaa 11710  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 26994 - 27080
Alignment:
Q  140 tattttagggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcctaaaatattctttaggtttttggt 226  Q
    ||||||| | ||||||||  |||| || |||||||||||| |||  ||| |||||||||||||||||||||| |||||| |||||||    
T  26994 tattttaagcttaaataactaaatggttcccctaaatatatcaacgtttaattttagtcctcctaaaatattatttaggcttttggt 27080  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 30800 - 30700
Alignment:
Q  160 aaatagtccccctaaatataccaatattttattttagtcctcctaaaa-tattctttaggtttttggtccctctaaaatttttcatctatgaaattagtc 258  Q
    |||||||| || ||||||||  || |||| ||||||||| |||||||| |||| |||| ||||||||||| ||||||| |||||||| || |||||||||    
T  30800 aaatagtctccttaaatataataacatttgattttagtc-tcctaaaaatattatttaagtttttggtcc-tctaaaaattttcatccatcaaattagtc 30703  T
Q  259 cct 261  Q
    |||    
T  30702 cct 30700  T

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Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 30310 - 30421
Alignment:
Q  146 agggttaaataagcaaatagtccccctaaatataccaatattttattttagtcctcct-aaaatattctttaggtttttggtccctctaaaatttttcat 244  Q
    |||||||||||||  ||| |||||| ||||||||| || |||| |||||||| ||||| ||||||||  ||| | ||||||| |||||||||  ||||||    
T  30310 agggttaaataagtgaatggtccccataaatatactaacatttgattttagt-ctcctaaaaatattacttaagcttttggt-cctctaaaaaatttcat 30407  T
Q  245 ctatgaaattagtc 258  Q
    | ||||||||||||    
T  30408 caatgaaattagtc 30421  T

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Target: scaffold0577 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 1647 - 1718
Alignment:
Q  187 tttattttagtcctcctaaaatattctttaggtttttggtccctctaaaatttttcatctatgaaattagtc 258  Q
    |||||||||||||  ||||||||||  ||||| |||||||||||  |||| |||||||  ||||||||||||    
T  1647 tttattttagtccctctaaaatattaattaggcttttggtcccttcaaaaattttcattcatgaaattagtc 1718  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 6296 - 6354
Alignment:
Q  172 taaatataccaatattttattttagtcctcctaaaatattctttaggtttttggtccct 230  Q
    |||||||||||| |||| |||| | || | ||||||||||||||||| |||||||||||    
T  6296 taaatataccaacatttgatttcaatctttctaaaatattctttagggttttggtccct 6354  T

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Target: scaffold0129; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 6354 - 6296
Alignment:
Q  328 agggaccaaaatcctaagaaatattttagagggattaaaattaaatgttggtatattta 386  Q
    ||||||||||| |||||  |||||||||||  |||| |||| |||||||||||||||||    
T  6354 agggaccaaaaccctaaagaatattttagaaagattgaaatcaaatgttggtatattta 6296  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 350 - 395
Target Start/End: Original strand, 52092 - 52137
Alignment:
Q  350 attttagagggattaaaattaaatgttggtatatttagtgggacca 395  Q
    ||||||||||||||||||| ||| |||||||||||||  |||||||    
T  52092 attttagagggattaaaatgaaaagttggtatatttatagggacca 52137  T

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