View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12055_low_28 (Length: 374)

Name: NF12055_low_28
Description: NF12055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12055_low_28
NF12055_low_28
[»] chr6 (12 HSPs)
chr6 (1-360)||(1241104-1241462)
chr6 (54-350)||(12350277-12350573)
chr6 (52-354)||(28541584-28541886)
chr6 (64-360)||(29182586-29182882)
chr6 (43-354)||(13041973-13042282)
chr6 (55-338)||(16435796-16436075)
chr6 (55-332)||(30736442-30736719)
chr6 (92-332)||(7271115-7271356)
chr6 (55-332)||(31013495-31013772)
chr6 (92-332)||(1870556-1870794)
chr6 (86-309)||(13210390-13210610)
chr6 (86-328)||(31833622-31833838)
[»] chr3 (19 HSPs)
chr3 (54-354)||(40496774-40497074)
chr3 (55-354)||(51545663-51545962)
chr3 (48-354)||(41346048-41346354)
chr3 (55-354)||(48169725-48170024)
chr3 (55-354)||(54014238-54014537)
chr3 (52-354)||(50676476-50676776)
chr3 (83-340)||(24709025-24709282)
chr3 (57-320)||(48737561-48737824)
chr3 (55-220)||(13542792-13542957)
chr3 (216-354)||(12568169-12568307)
chr3 (216-354)||(13544633-13544771)
chr3 (72-224)||(30462801-30462951)
chr3 (248-354)||(30459807-30459913)
chr3 (71-130)||(22756168-22756227)
chr3 (90-134)||(1334733-1334777)
chr3 (84-134)||(11529022-11529072)
chr3 (90-126)||(38600758-38600794)
chr3 (90-134)||(39866505-39866549)
chr3 (48-88)||(40496766-40496806)
[»] chr4 (30 HSPs)
chr4 (55-354)||(40071449-40071748)
chr4 (55-354)||(54438157-54438456)
chr4 (55-352)||(37064753-37065050)
chr4 (55-354)||(925136-925435)
chr4 (55-354)||(39787993-39788293)
chr4 (55-354)||(17493754-17494053)
chr4 (55-340)||(47199501-47199786)
chr4 (55-354)||(34408657-34408956)
chr4 (54-354)||(20789674-20789973)
chr4 (52-326)||(33800780-33801053)
chr4 (55-354)||(21240327-21240626)
chr4 (86-330)||(32217968-32218212)
chr4 (92-302)||(52101101-52101311)
chr4 (86-332)||(3172051-3172296)
chr4 (103-320)||(53509690-53509907)
chr4 (86-332)||(28910189-28910434)
chr4 (55-332)||(46870630-46870905)
chr4 (232-360)||(51744661-51744789)
chr4 (55-195)||(51744519-51744659)
chr4 (91-332)||(41555485-41555719)
chr4 (248-354)||(10441144-10441251)
chr4 (55-171)||(10441517-10441631)
chr4 (56-224)||(28689666-28689829)
chr4 (264-350)||(28690104-28690189)
chr4 (90-134)||(48400583-48400627)
chr4 (84-134)||(8295140-8295190)
chr4 (92-134)||(35690568-35690610)
chr4 (90-128)||(39052853-39052891)
chr4 (55-117)||(40020862-40020924)
chr4 (86-126)||(35029154-35029194)
[»] chr2 (28 HSPs)
chr2 (55-354)||(43370675-43370974)
chr2 (55-354)||(2110221-2110520)
chr2 (51-354)||(45080416-45080717)
chr2 (55-354)||(29193989-29194288)
chr2 (55-353)||(28585683-28585981)
chr2 (72-354)||(4828106-4828388)
chr2 (54-330)||(8381315-8381591)
chr2 (56-318)||(1779073-1779335)
chr2 (86-350)||(42846942-42847202)
chr2 (86-243)||(9370486-9370643)
chr2 (64-320)||(39646313-39646591)
chr2 (55-272)||(43377208-43377423)
chr2 (55-224)||(31921621-31921788)
chr2 (55-159)||(30422588-30422692)
chr2 (91-216)||(16970295-16970418)
chr2 (55-170)||(25898766-25898880)
chr2 (233-319)||(16964852-16964938)
chr2 (248-338)||(31922032-31922122)
chr2 (83-140)||(27922606-27922663)
chr2 (266-354)||(25898464-25898552)
chr2 (55-135)||(9724988-9725068)
chr2 (91-128)||(18460605-18460642)
chr2 (55-114)||(20027066-20027125)
chr2 (91-134)||(24356222-24356265)
chr2 (90-126)||(7213594-7213630)
chr2 (91-135)||(7931436-7931480)
chr2 (84-128)||(32556287-32556331)
chr2 (72-112)||(41365853-41365893)
[»] chr7 (22 HSPs)
chr7 (55-354)||(4040948-4041247)
chr7 (55-354)||(40232115-40232414)
chr7 (72-354)||(29737406-29737688)
chr7 (55-354)||(27596086-27596384)
chr7 (55-338)||(6392288-6392571)
chr7 (55-354)||(41427648-41427947)
chr7 (63-354)||(31689361-31689652)
chr7 (55-353)||(25943649-25943943)
chr7 (70-354)||(24300169-24300443)
chr7 (98-354)||(38276588-38276844)
chr7 (91-354)||(21442836-21443097)
chr7 (124-332)||(48838082-48838289)
chr7 (55-224)||(22338101-22338268)
chr7 (72-224)||(22619883-22620033)
chr7 (248-354)||(22337711-22337818)
chr7 (264-354)||(22619525-22619615)
chr7 (52-134)||(45890772-45890854)
chr7 (55-122)||(7380535-7380602)
chr7 (91-134)||(30659433-30659476)
chr7 (90-135)||(1643270-1643315)
chr7 (55-88)||(41427915-41427948)
chr7 (78-134)||(25617732-25617788)
[»] chr8 (14 HSPs)
chr8 (55-354)||(27820774-27821073)
chr8 (55-350)||(17493531-17493826)
chr8 (55-354)||(18575029-18575328)
chr8 (58-354)||(38069898-38070194)
chr8 (55-354)||(11254501-11254800)
chr8 (55-350)||(39906916-39907208)
chr8 (55-352)||(12738366-12738663)
chr8 (78-354)||(17335994-17336269)
chr8 (55-354)||(9753771-9754069)
chr8 (82-327)||(13243574-13243818)
chr8 (55-224)||(11147782-11147949)
chr8 (91-134)||(29638412-29638455)
chr8 (264-354)||(11146771-11146861)
chr8 (91-135)||(5878178-5878222)
[»] scaffold0047 (1 HSPs)
scaffold0047 (55-354)||(69754-70053)
[»] chr1 (23 HSPs)
chr1 (55-354)||(46862557-46862856)
chr1 (58-354)||(39150900-39151196)
chr1 (55-354)||(1929217-1929515)
chr1 (55-354)||(32045834-32046133)
chr1 (55-354)||(28036700-28037000)
chr1 (55-338)||(50777014-50777297)
chr1 (91-354)||(38321646-38321909)
chr1 (59-354)||(46370928-46371217)
chr1 (72-354)||(8229064-8229347)
chr1 (55-354)||(1207452-1207749)
chr1 (55-332)||(40562436-40562711)
chr1 (55-328)||(9129401-9129675)
chr1 (142-328)||(38817801-38817984)
chr1 (86-134)||(36326154-36326202)
chr1 (55-134)||(42926245-42926324)
chr1 (93-130)||(20986544-20986581)
chr1 (89-134)||(50334035-50334080)
chr1 (84-134)||(6552159-6552209)
chr1 (72-134)||(14222837-14222899)
chr1 (93-135)||(47792147-47792189)
chr1 (93-134)||(5359236-5359277)
chr1 (86-134)||(9590625-9590673)
chr1 (86-134)||(27209916-27209964)
[»] chr5 (13 HSPs)
chr5 (55-354)||(14044057-14044355)
chr5 (55-354)||(36982187-36982486)
chr5 (55-322)||(42897374-42897641)
chr5 (55-354)||(2970666-2970963)
chr5 (54-220)||(36767875-36768039)
chr5 (72-221)||(33404365-33404512)
chr5 (54-171)||(5712600-5712717)
chr5 (248-354)||(33403195-33403301)
chr5 (248-354)||(36768782-36768888)
chr5 (92-126)||(4044433-4044467)
chr5 (85-134)||(4475355-4475404)
chr5 (85-134)||(4576358-4576407)
chr5 (90-134)||(11099430-11099474)
[»] scaffold0519 (1 HSPs)
scaffold0519 (55-354)||(10593-10892)
[»] scaffold0061 (1 HSPs)
scaffold0061 (55-354)||(10017-10316)
[»] scaffold0532 (1 HSPs)
scaffold0532 (55-335)||(3834-4114)
[»] scaffold0318 (1 HSPs)
scaffold0318 (58-354)||(16358-16641)
[»] scaffold0016 (2 HSPs)
scaffold0016 (55-235)||(92169-92349)
scaffold0016 (309-354)||(92374-92419)
[»] scaffold1194 (1 HSPs)
scaffold1194 (55-330)||(1004-1267)
[»] scaffold0003 (1 HSPs)
scaffold0003 (89-128)||(352414-352453)
[»] scaffold0685 (1 HSPs)
scaffold0685 (91-135)||(6353-6397)


Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-157; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 1241462 - 1241104
Alignment:
Q  1 aatataaatgtaaacaaaagaataaaaaacaagcaagtttaagaaagaatatagtactccctccgtccttaaataagtgacttatttgatcatttcacac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |  ||||| ||||||||||||    
T  1241462 aatataaatgtaaacaaaagaataaaaaacaagcaagtttaagaaagaatatagtactccctccgtccctgaataagtaatctatttcatcatttcacac 1241363  T
Q  101 agattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagtaatgattac 200  Q
    | |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  1241362 aaattaagaaaaatgtaaaaatgaaagaaagaaagtgatacttttactgagttgcccttgtcattattttgaaactttttca-ttttaagtaatgattac 1241264  T
Q  201 tttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaata 300  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  1241263 tttctttgttccactgcaaactttaatatggggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaagttcaagta 1241164  T
Q  301 ttgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagtggtatt 360  Q
    |||||||||||||||||||||||||||| |||||||||||  |||||||||||| |||||    
T  1241163 ttgtgggacaaatattttttacaaatagatcacttattcagggacggagggagtagtatt 1241104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 54 - 350
Target Start/End: Complemental strand, 12350573 - 12350277
Alignment:
Q  54 gtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagtt 153  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  12350573 gtactccctccgtccataaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatgcttttactgagtt 12350474  T
Q  154 gaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||| |||||    
T  12350473 gcccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttttactacaaactttaacatgaggaccacaaaaagtatatataa 12350374  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagg 350  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  12350373 ggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaaatattgtgggacaaatactttttacaaataggtcacttattcagagacggagg 12350277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 52 - 354
Target Start/End: Original strand, 28541584 - 28541886
Alignment:
Q  52 tagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgag 151  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  28541584 tagtactccctccgtccctaaataagtgacctatttgaccattttacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactggg 28541683  T
Q  152 ttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttat 251  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28541684 ttgcccttgtcattattttgaaactttttcacttttaagtaatgattattttttttgttccactacaaactttaacatggggaccacaaaaagtatttat 28541783  T
Q  252 aagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggaggg 351  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  28541784 aaggggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggataaatattttttacaaataagtcacttattcagagacggaggg 28541883  T
Q  352 agt 354  Q
    |||    
T  28541884 agt 28541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 64 - 360
Target Start/End: Complemental strand, 29182882 - 29182586
Alignment:
Q  64 cgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtca 163  Q
    ||||||| |||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  29182882 cgtccttgaataagtgacatatttgaccatttcacacagattaagaaaaatgtaaagatgaaagaaagagagtgatatttttactgagttgcccttgtca 29182783  T
Q  164 ttattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatc 263  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  29182782 ttattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatagggaccacaaaatgtatttataagaggtaaatc 29182683  T
Q  264 tgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagtggtatt 360  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||| |||||||| |||||    
T  29182682 tgtcaaattttgcctagaaatctgagaaggtcaagtattgtaggacaaatattttttacaaataggtcacttattcagggacagagggagtagtatt 29182586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 43 - 354
Target Start/End: Complemental strand, 13042282 - 13041973
Alignment:
Q  43 gaaagaatatagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatact 142  Q
    |||| |||||||| |||||||||||||| |||||||||  |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |    
T  13042282 gaaataatatagtcctccctccgtccttgaataagtgatctatttgattatttcacacagattaa-aaaagtgtaaagatgaaagaaagagagtgatatt 13042184  T
Q  143 tttactgagttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaa 242  Q
    |||||||||||| ||||||||||||||  ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||    
T  13042183 tttactgagttgcccttgtcattatttaaaaaatttt-cacttttaagtaatgattattttctttgttccactacaaactttaacatagggaccacaaaa 13042085  T
Q  243 agtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaa 342  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  13042084 agtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaag 13041985  T
Q  343 gacggagggagt 354  Q
    ||||||||||||    
T  13041984 gacggagggagt 13041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 55 - 338
Target Start/End: Complemental strand, 16436075 - 16435796
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||||||    
T  16436075 tactccctccgtccctgaataagtgacctatttgagcatttcacacagattaagaaaagtgtaaagatgaaagaaag----tgatacttttactgagttg 16435980  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |    
T  16435979 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatgagaaccacaaaaagtatttatatg 16435880  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttatt 338  Q
     ||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  16435879 gggtaaatctgtcaaattttccttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataagtcatttatt 16435796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 55 - 332
Target Start/End: Complemental strand, 30736719 - 30736442
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||  | ||||  |||| ||||| |  |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||    
T  30736719 tactccctccgtctctcaatacttgacctatttaactatttcacacagattaagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattg 30736620  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||  ||||||||||||||||||    
T  30736619 tccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttcctctacaaactttaacatggggattacaaaaagtatttataag 30736520  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtca 332  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  30736519 gggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattgtgggacaaatatttttttcaaataggtca 30736442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 92 - 332
Target Start/End: Original strand, 7271115 - 7271356
Alignment:
Q  92 atttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagt 191  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  7271115 atttcacacagattaagaaaagtgtaaagatgaaagaaatagaatgatatttttactgaattgcccttgtcattattttgaaactttttcacttttaagt 7271214  T
Q  192 aatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaa 291  Q
    |||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  7271215 aatgattactttctttattccactacaaactttaacatggggacaacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaa 7271314  T
Q  292 ggtcaaatattgtgggacaaata-ttttttacaaataggtca 332  Q
    |||||| |||| ||||||||||| |||||| |||||||||||    
T  7271315 ggtcaagtattatgggacaaatattttttttcaaataggtca 7271356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 55 - 332
Target Start/End: Original strand, 31013495 - 31013772
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||| ||||||| | ||||  |||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||| ||||||||| |||    
T  31013495 tactccttccgtccctcaatacttgacctatttgaccatttcatacagattaagaaaagtgtaaaaacgaaagaaagataatgatatttttactgaattg 31013594  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || ||||||||| ||||||||||    
T  31013595 cccttatcattattttgaaactttttcacttttaagtaatgattattttctttgttctactacaaactttaatatgggggccacaaaaaatatttataag 31013694  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtca 332  Q
     | |||||| |||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  31013695 ggataaatccgtcaaattctgcttagaaatctgagaagatcaagtattgtggaacaaatatttttttcaaataggtca 31013772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 92 - 332
Target Start/End: Complemental strand, 1870794 - 1870556
Alignment:
Q  92 atttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagt 191  Q
    |||| |||||||||| ||||||| |||| ||||||||||| || ||||| ||||||| | ||| |||||| ||||||||||| | ||  |||||||||||    
T  1870794 attttacacagatta-gaaaagtataaagatgaaagaaagggaatgatatttttactaaattgcccttgttattattttgaagcctt--cacttttaagt 1870698  T
Q  192 aatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaa 291  Q
    ||||||||||||||||||||||||||||||||| | |||  || ||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||    
T  1870697 aatgattactttctttgttccactacaaacttttacatggagatcacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaa 1870598  T
Q  292 ggtcaaatattgtgggacaaatatt-ttttacaaataggtca 332  Q
    |||||| |||||| | ||||||||| |||| |||||||||||    
T  1870597 ggtcaagtattgttgaacaaatatttttttccaaataggtca 1870556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 86 - 309
Target Start/End: Complemental strand, 13210610 - 13210390
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcactt 185  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||| | | |||||| || |||||||||||||  |||||    
T  13210610 ttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagaatgattattttactgaatcgcccttgttat-attttgaaacttt--cactt 13210514  T
Q  186 ttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatc 285  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||  ||||||||||| |||||||||  ||||||| ||||||||| |||||| ||||     
T  13210513 ttaagtaagaattactttctttgttccactacaaacttttacatggagaccacaaaaaatatttataatgggtaaatttgtcaaattctgcttaaaaatt 13210414  T
Q  286 tgagaaggtcaaatattgtgggac 309  Q
    |||||||||||| ||||| |||||    
T  13210413 tgagaaggtcaagtattgagggac 13210390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 86 - 328
Target Start/End: Original strand, 31833622 - 31833838
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcactt 185  Q
    |||| ||||| ||||| ||||||||||||||||| |||||||||| | | ||||| ||||||| | ||| ||||   ||||||||||||| ||  || ||    
T  31833622 ttgaccattttacacaaattaagaaaagtgtaaagatgaaagaaaaataatgatatttttactaaattgccctt---attattttgaaacctt--cattt 31833716  T
Q  186 ttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatc 285  Q
    |||||||||||||| ||||||||||||||||||                     |||||||||| |||| | ||||| ||||||||| |||||| |||||    
T  31833717 ttaagtaatgattattttctttgttccactaca---------------------aaaagtatttttaagggataaatttgtcaaattatgcttaaaaatc 31833795  T
Q  286 tgagaaggtcaaatattgtgggacaaatattttttacaaatag 328  Q
    |||||||||||| ||| |||||||||||||||||| |||||||    
T  31833796 tgagaaggtcaagtatcgtgggacaaatatttttttcaaatag 31833838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 253; Significance: 1e-140; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 54 - 354
Target Start/End: Complemental strand, 40497074 - 40496774
Alignment:
Q  54 gtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagtt 153  Q
    ||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40497074 gtactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagtt 40496975  T
Q  154 gaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  40496974 gcccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataa 40496875  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
    | |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40496874 ggggtaaatctgtcaaattttgtttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaggacggagggag 40496775  T
Q  354 t 354  Q
    |    
T  40496774 t 40496774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 51545962 - 51545663
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    ||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51545962 tactctctccgtccctgaataagtgacctatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 51545863  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  51545862 cccttgtcattattttgaaactttttcacttttaagtaatgattactttttttgttccactacaaactttaacatggggaccacaaaaagtatttataag 51545763  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  51545762 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaggaacggagggagt 51545663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 48 - 354
Target Start/End: Complemental strand, 41346354 - 41346048
Alignment:
Q  48 aatatagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttac 147  Q
    ||||||||||||||||||||| | |||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  41346354 aatatagtactccctccgtccctgaataagtgacatatttgactatttcacacagattaagaaaagtgtaaagatgaaagaaagtaagtgatacttttac 41346255  T
Q  148 tgagttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtat 247  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  41346254 tgagttgcccttgtcattattttaaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtat 41346155  T
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacgg 347  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||    
T  41346154 ttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacgg 41346055  T
Q  348 agggagt 354  Q
    |||||||    
T  41346054 agggagt 41346048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 48170024 - 48169725
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| ||    
T  48170024 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatactattactgagctg 48169925  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  48169924 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 48169825  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     | |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48169824 ggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtcacttattcagagacggagggagt 48169725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 54014537 - 54014238
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    ||||||||| |||| | ||||||| || ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  54014537 tactccctctgtcccttaataagtaacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 54014438  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  54014437 cccttatcattattttgaaactttttcacttttaagtaataattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 54014338  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  54014337 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 54014238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 52 - 354
Target Start/End: Complemental strand, 50676776 - 50676476
Alignment:
Q  52 tagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgag 151  Q
    ||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  50676776 tagtactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatatttttactgag 50676677  T
Q  152 ttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttat 251  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  50676676 ttg-ccttgtcattattttaaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatg-ggaccacaaaaagtatttat 50676579  T
Q  252 aagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggaggg 351  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  50676578 aaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggaggg 50676479  T
Q  352 agt 354  Q
    |||    
T  50676478 agt 50676476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 83 - 340
Target Start/End: Complemental strand, 24709282 - 24709025
Alignment:
Q  83 tatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttca 182  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24709282 tatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaattttttca 24709183  T
Q  183 cttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||||||||||| ||    
T  24709182 cttttaagtaatgattactttctttgtttcactacaaactttaacatgaggaccacaaaaagtatttataaaggataaatctgtcaaattttgcttataa 24709083  T
Q  283 atctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattca 340  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24709082 atctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattca 24709025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 57 - 320
Target Start/End: Complemental strand, 48737824 - 48737561
Alignment:
Q  57 ctccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgac 156  Q
    |||||||||||||| ||||  |||| || ||||  |||||||||||||||||||||||||| | |||||||||||| | ||||| ||||||||| ||| |    
T  48737824 ctccctccgtccttcaatacttgacctacttgacaatttcacacagattaagaaaagtgtagagatgaaagaaagaaaatgatatttttactgaattgcc 48737725  T
Q  157 cttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagag 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||  |    
T  48737724 cttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataaagg 48737625  T
Q  257 gtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatatttttt 320  Q
    |||||| ||||||||| |||||| |||||||| ||| |||| |||| |  ||||||||||||||    
T  48737624 gtaaatttgtcaaattctgcttaaaaatctgaaaagatcaagtattataagacaaatatttttt 48737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 55 - 220
Target Start/End: Original strand, 13542792 - 13542957
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||| ||||||| | |||||||||| ||||||| ||||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  13542792 tactccatccgtccctgaataagtgacctatttgaccatttcatatagattaagaaaagtgtaaagatgaaagaaagagattgatacttttactgagttg 13542891  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaa 220  Q
     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  13542892 cccttgtcattattttaaaactttttcacttttaagtaatgattactttctttgtttcgctacaaa 13542957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 216 - 354
Target Start/End: Original strand, 12568169 - 12568307
Alignment:
Q  216 acaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatat 315  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  12568169 acaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatat 12568268  T
Q  316 tttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||| ||||||||||||  ||||||||||||    
T  12568269 tttttacaaatatgtcacttattcagggacggagggagt 12568307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 216 - 354
Target Start/End: Original strand, 13544633 - 13544771
Alignment:
Q  216 acaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatat 315  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  13544633 acaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatat 13544732  T
Q  316 tttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||| ||||||||||||  ||||||||||||    
T  13544733 tttttacaaatatgtcacttattcagggacggagggagt 13544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 224
Target Start/End: Complemental strand, 30462951 - 30462801
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttg 171  Q
    |||||||||  || |||| |||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||| ||| |||| | ||||||||     
T  30462951 aataagtgatctacttgaccatttcacacagattaagaaaagtataaagatgaaagaaatagagtgatatttttactgaattgcccttattattattttt 30462852  T
Q  172 aaactttttcacttttaagtaatgattactttctttgttccactacaaacttt 224  Q
    ||||   ||||||||||| |||| ||||||||  |||||||||||||||||||    
T  30462851 aaac--cttcacttttaaataataattactttaattgttccactacaaacttt 30462801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 30459913 - 30459807
Alignment:
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacgg 347  Q
    ||||||| ||||||  |||||||||||||||  |||| |||||||||||| ||||  ||||||| | ||||||||||||||||||||||||||  |||||    
T  30459913 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtatttagggacaatttttttttacaaataggtcacttattcagggacgg 30459814  T
Q  348 agggagt 354  Q
    |||||||    
T  30459813 agggagt 30459807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 22756168 - 22756227
Alignment:
Q  71 aaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaa 130  Q
    |||||||||| | |||||||||||||||||| |||||| ||| |||| ||||||||||||    
T  22756168 aaataagtgagtcatttgatcatttcacacatattaaggaaattgtataaatgaaagaaa 22756227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 1334733 - 1334777
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||    
T  1334733 tcatttcacacagattaagaaaagcgtataaatgaaagagagaga 1334777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 11529022 - 11529072
Alignment:
Q  84 atttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||| |||||||||||| |||||||||| | || ||||||||||||||||    
T  11529022 atttgctcatttcacacatattaagaaaaatatataaatgaaagaaagaga 11529072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 38600758 - 38600794
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaa 126  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  38600758 tcatttcgcacagattaagaaaagtgtataaatgaaa 38600794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 39866505 - 39866549
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||||| |||||||||| |||| ||||||| ||||||||    
T  39866505 tcatttcacacatattaagaaaaatgtataaatgaaggaaagaga 39866549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 40496766 - 40496806
Alignment:
Q  48 aatatagtactccctccgtccttaaataagtgacttatttg 88  Q
    ||||| ||||||||||||||||| |||||||||| ||||||    
T  40496766 aatattgtactccctccgtccttgaataagtgacctatttg 40496806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 40071449 - 40071748
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40071449 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 40071548  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  40071549 cccttgtcattattttgaaactttttcacttttaagcaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 40071648  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  40071649 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 40071748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 54438157 - 54438456
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54438157 tactccctccgtccctaaataagtgacctatttgaccatttcacaccgattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 54438256  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  54438257 cccttgtcattattttaaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 54438356  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  54438357 gggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 54438456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 55 - 352
Target Start/End: Original strand, 37064753 - 37065050
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||| ||||||| | |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37064753 tactccatccgtccctgaataagtgacctatttgatcatttcacatagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 37064852  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37064853 cccttgtcatttttttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatgaggaccacaaaaagtatttataag 37064952  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggaggga 352  Q
     ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  37064953 gggtaaatatgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataagtcacttattcagggacggaggga 37065050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 925136 - 925435
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||||    
T  925136 tactccctccgtcccttaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaagataaaagaaataaagtgatacttttactgagttg 925235  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  925236 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 925335  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||  ||||| ||||||    
T  925336 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtaggataaatattttttacaaataggtcacttattcagggacggtgggagt 925435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 39788293 - 39787993
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||| ||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39788293 tactcccttcgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 39788194  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  39788193 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 39788094  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatatt-ttttacaaataggtcacttattcaaagacggagggag 353  Q
     ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||| | ||||||||||||    
T  39788093 gggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtggaacaaatatttttttacaaataggtcacttatttagagacggagggag 39787994  T
Q  354 t 354  Q
    |    
T  39787993 t 39787993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 17494053 - 17493754
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  17494053 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttattgagttg 17493954  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  17493953 cccttgtcattattttgaaactttttcacttttaagtaataattattttctttgttccactacaaactttaacatggggaccacaaaaagtttttataag 17493854  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17493853 gggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattgtgagacaaatattttttacaaataggtcacttattcagggacggagggagt 17493754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 55 - 340
Target Start/End: Complemental strand, 47199786 - 47199501
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||| | | |||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  47199786 tactccctccgtacctgaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttattgagttg 47199687  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |    
T  47199686 cccttgtcattattttaaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttatatg 47199587  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattca 340  Q
     ||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47199586 gggtaaatctgttaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattca 47199501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 34408657 - 34408956
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||  ||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  34408657 tactccctccgtccctgaataagtgacctatttggccatttcacacatattaggaaaagtgtaaagatgaaagaaagagaatgatacttttattgagttg 34408756  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||| |||||||||||||||||||||||    
T  34408757 cccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttatactacaaactttaacatgtggaccacaaaaagtatttataag 34408856  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  34408857 gggtaaatctgtcaaattttacctagaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtcacttattcagggacggagggagt 34408956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 54 - 354
Target Start/End: Complemental strand, 20789973 - 20789674
Alignment:
Q  54 gtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagtt 153  Q
    ||||||||||||| | | |||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  20789973 gtactccctccgttcctgaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagct 20789874  T
Q  154 gaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20789873 g-ccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataa 20789775  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
    | | ||||||||||||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||| |||||||  ||||||| |||    
T  20789774 gggataaatctgtcaaattttacttagaaatctgagaagatcaagtattatgggacaaatattttttacaaatagatcatttattcagggacggagagag 20789675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 52 - 326
Target Start/End: Original strand, 33800780 - 33801053
Alignment:
Q  52 tagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgag 151  Q
    ||||| ||||||||||| | |||||||||| ||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  33800780 tagtagtccctccgtccctgaataagtgacctatttgaccatttcacacagattcagaaaagtgtaaagatggaagaaagagagtgatacttttactgag 33800879  T
Q  152 ttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttat 251  Q
    ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  33800880 ttgcccttgtcatcattttgaaactttttcacttttaaataatgattactttctttgttccactacaaactttaatatggggaccac-aaaagtatttat 33800978  T
Q  252 aagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaat 326  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| | | |||||||||||||||||||    
T  33800979 aagaggtaaatctgtcaaattttacttagaaatctgagaaggtcaagtattatagaacaaatattttttacaaat 33801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 21240626 - 21240327
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| |  |||  |||| || |||| ||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||| |||    
T  21240626 tactccctccgtccctcgatacttgacctacttgaccatttcacacagattaagaaaagtgtagagatgaaagaaagagaatgatatttttactgaattg 21240527  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
    || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |    
T  21240526 acattgtcactattttgaaactttttcatttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttatatg 21240427  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||| | ||||||| |||||||||||||| |||| ||||||||||||||||| |||||||||||  |||| |  ||||||||||||    
T  21240426 gggtaaatctgtcaaattctacttagaagtctgagaaggtcaagtattatgggacaaatatttttttcaaataggtcaagtattgagggacggagggagt 21240327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 86 - 330
Target Start/End: Original strand, 32217968 - 32218212
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcactt 185  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||| | ||| ||||||||| | | ||||||||||||||||||||||||||||||    
T  32217968 ttgaccatttcacacagattaagaagagtgtaaagatgaaagaaagagaattatatttttactgaatagtccttgtcattattttgaaactttttcactt 32218067  T
Q  186 ttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatc 285  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  32218068 ttaagtaatgattactttctttgttccactacaaactttaacatgggaaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttaaaaatc 32218167  T
Q  286 tgagaaggtcaaatattgtgggacaaatattttttacaaataggt 330  Q
    ||||||  |||| |||| | ||||||||||||||| |||||||||    
T  32218168 tgagaaaatcaagtattataggacaaatatttttttcaaataggt 32218212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 92 - 302
Target Start/End: Complemental strand, 52101311 - 52101101
Alignment:
Q  92 atttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagt 191  Q
    |||||||||||||||||||||||||||| |||||||||| | | ||||| ||||||||| |||  |||||||||||||||||| ||||||||||||||||    
T  52101311 atttcacacagattaagaaaagtgtaaagatgaaagaaatataatgatatttttactgaattgcacttgtcattattttgaaattttttcacttttaagt 52101212  T
Q  192 aatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaa 291  Q
    |||| ||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  52101211 aatggttattttctttgttccactacaaactttaacatgggaaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttataaatctgagaa 52101112  T
Q  292 ggtcaaatatt 302  Q
    |||| ||||||    
T  52101111 ggtcgaatatt 52101101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 86 - 332
Target Start/End: Original strand, 3172051 - 3172296
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtca-ttattttgaaactttttcact 184  Q
    |||| |||||||||||||||||||||| |||||| |||||| ||||| | ||||| ||||||||| ||| |||||| | |||||||||||| ||  ||||    
T  3172051 ttgaccatttcacacagattaagaaaaatgtaaagatgaaaaaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt--cact 3172148  T
Q  185 tttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaat 284  Q
    |||||||||||||||||||||||||||||||||||||||| | ||   ||||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  3172149 tttaagtaatgattactttctttgttccactacaaacttttacattgagaccacaaaaagtatttataaaaggtaaatttgtcaaattctgcttagaaat 3172248  T
Q  285 ctgagaaggtcaaatattgtgggacaaatattttttacaaataggtca 332  Q
     |||||| ||||| |||||||||||||||||||||| |||||||||||    
T  3172249 ttgagaaagtcaagtattgtgggacaaatatttttttcaaataggtca 3172296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 103 - 320
Target Start/End: Original strand, 53509690 - 53509907
Alignment:
Q  103 attaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagtaatgattactt 202  Q
    |||| |||||||||||| |||||||||| ||| ||||| | ||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||| ||    
T  53509690 attatgaaaagtgtaaagatgaaagaaaaagaatgatattgttactgaattgtcattgtcattattttgaaactttttcacttttaaataatgattattt 53509789  T
Q  203 tctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatatt 302  Q
    |||||||||||||||||| ||||| ||| ||| |||||||||||||||||||   ||||| ||||||||| | ||||||||||||| |||||||||||||    
T  53509790 tctttgttccactacaaattttaacatggggatcacaaaaagtatttataaggaataaatatgtcaaattctccttagaaatctgataaggtcaaatatt 53509889  T
Q  303 gtgggacaaatatttttt 320  Q
    |||| |||||||||||||    
T  53509890 gtggaacaaatatttttt 53509907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 86 - 332
Target Start/End: Original strand, 28910189 - 28910434
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcactt 185  Q
    ||||| |||||||| |||||||||||| || ||| |||||||||||||| ||||| ||||||||| ||| |||||| ||||||||||||| ||  |||||    
T  28910189 ttgattatttcacatagattaagaaaaatgcaaagatgaaagaaagagaatgatatttttactgaattgtccttgttattattttgaaacctt--cactt 28910286  T
Q  186 ttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatc 285  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||   ||||||||||||||||||||| ||||||| ||||||||| |||||| |||||    
T  28910287 ttaagtaatgattactttctttgttccactagaaacttttacatggaaaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatc 28910386  T
Q  286 tgagaaggtcaaatattgtgggacaaata-ttttttacaaataggtca 332  Q
    ||||||||| ||||| ||| | ||||||| |||||| |||||||||||    
T  28910387 tgagaaggttaaatactgtagaacaaatattttttttcaaataggtca 28910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 55 - 332
Target Start/End: Complemental strand, 46870905 - 46870630
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||| ||||||||| | ||||  |||| || ||||  |||||||||| | ||| ||||||| ||  |||||||||||||| ||||| ||||||||| | |    
T  46870905 tacttcctccgtccgtcaatacttgacctacttgacaatttcacacatagtaaaaaaagtgcaaggatgaaagaaagagaatgatatttttactgaatag 46870806  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||| ||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  46870805 tccttgttattattttgaaacctt--cacttttaagtaatgatgactttctttgttccactacaaacttttacatggggaccacaaaaagtatttataag 46870708  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtca 332  Q
     | ||||| ||||||||| | |||| ||||||||| ||||||| ||||||||||||||||||||||  ||||||||||    
T  46870707 ggataaatttgtcaaattgtacttaaaaatctgagcaggtcaagtattgtgggacaaatattttttctaaataggtca 46870630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 51744661 - 51744789
Alignment:
Q  232 ggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtc 331  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  51744661 ggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtc 51744760  T
Q  332 acttattcaaagacggagggagtggtatt 360  Q
    ||||||| |  |||||||||||| |||||    
T  51744761 acttatttagggacggagggagtagtatt 51744789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 195
Target Start/End: Original strand, 51744519 - 51744659
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    ||||| |||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  51744519 tactctctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgtgagaaagagagtgatacttttactaagttg 51744618  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatg 195  Q
     |||||||||||||||||||||| |||||||||||||||||    
T  51744619 cccttgtcattattttgaaacttgttcacttttaagtaatg 51744659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 332
Target Start/End: Complemental strand, 41555719 - 41555485
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaag 190  Q
    ||||||||||||||||||||||||||||| ||||||||    || ||||| ||||||||| ||| | ||   |||||||| |||| ||  |  |||||||    
T  41555719 catttcacacagattaagaaaagtgtaaagatgaaaga----gaatgatatttttactgaattgtcatt---attatttttaaaccttcacttttttaag 41555627  T
Q  191 taatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgaga 290  Q
    |||||||||||||||||||| ||||||||||||| | ||   ||||||||||||||  |||||| ||||||  |||||||||  ||||| |||| |||||    
T  41555626 taatgattactttctttgtttcactacaaacttttacatagagaccacaaaaagtaactataaggggtaaacttgtcaaattaagcttaaaaatttgaga 41555527  T
Q  291 aggtcaaatattgtgggacaaatattttttacaaataggtca 332  Q
    ||||||| ||||| ||||||||| |||||| |||||||||||    
T  41555526 aggtcaattattgcgggacaaattttttttccaaataggtca 41555485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 10441251 - 10441144
Alignment:
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaa-tattttttacaaataggtcacttattcaaagacg 346  Q
    ||||||||||||||  |||||||||||||||  |||| |||||||||||| |||| ||||||||| | ||||||||||||||||||||||||||  ||||    
T  10441251 ttataagaggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaaatttttttttacaaataggtcacttattcagggacg 10441152  T
Q  347 gagggagt 354  Q
    ||||||||    
T  10441151 gagggagt 10441144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 10441631 - 10441517
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| || |||| ||||||||||||||||||| ||||||||| || ||||||  ||||||||| ||||||||| |||    
T  10441631 tactccctccgtccctgaataagtgacctacttgaccatttcacacagattaagataagtgtaaagataaaagaa--agagtgatatttttactgaattg 10441534  T
Q  155 accttgtcattattttg 171  Q
     |||| | |||||||||    
T  10441533 cccttattattattttg 10441517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 28689666 - 28689829
Alignment:
Q  56 actccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttga 155  Q
    |||||||| |||| | |||||||||  |||||||  ||||||||||||||||||||| |||||| |||||  ||| | ||  ||| ||||||||| |||     
T  28689666 actccctctgtccctgaataagtgatctatttgactatttcacacagattaagaaaaatgtaaagatgaagaaaaaaaag--atatttttactgaattgc 28689763  T
Q  156 ccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaacttt 224  Q
    |||| | |||||||| |||| ||  || |||||| |||| ||||||||  |||||||||||||||||||    
T  28689764 ccttattattatttttaaacctt--ca-ttttaaataataattactttaattgttccactacaaacttt 28689829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 28690104 - 28690189
Alignment:
Q  264 tgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagg 350  Q
    |||||||||||||||  |||| ||||||||||||||||| || ||| ||| ||||||||||||| |||| |||||||  ||||||||    
T  28690104 tgtcaaattttgctttaaaatttgagaaggtcaaatattttgcgac-aattttttttacaaatatgtcagttattcagggacggagg 28690189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 48400583 - 48400627
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||    
T  48400583 tcatttcacacagattaagaaaaatgtataaatgaaagagagaga 48400627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 8295190 - 8295140
Alignment:
Q  84 atttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||| |||||||||||| |||||||||| |||| |||||||||| |||||    
T  8295190 atttgctcatttcacacaaattaagaaaaatgtataaatgaaagagagaga 8295140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 35690610 - 35690568
Alignment:
Q  92 atttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||||||||||||||||   ||||||||||||||||||    
T  35690610 atttcacacagattaagaaaagaagaaaaatgaaagaaagaga 35690568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 39052853 - 39052891
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaaga 128  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  39052853 tcatttcacacagattaagaaaaatgtataaatgaaaga 39052891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 40020862 - 40020924
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgta 117  Q
    |||||||||| |||| || ||||||||  ||||| |||||||||||| |||||||||| ||||    
T  40020862 tactccctccttcctaaattaagtgacccatttggtcatttcacacatattaagaaaaatgta 40020924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 35029194 - 35029154
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaa 126  Q
    |||| ||||||||| ||||||||||||||||| ||||||||    
T  35029194 ttgaccatttcacatagattaagaaaagtgtataaatgaaa 35029154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 43370974 - 43370675
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43370974 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttg 43370875  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43370874 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 43370775  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  43370774 gggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 43370675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 2110520 - 2110221
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||| ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2110520 tactccttccgtccctgaataagtgacatatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 2110421  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2110420 cccttgtcattattttgaaactttttcacttttaagtaatgattactttttttgttccactacaaactttaacatggggaccacaaaaagtatttataag 2110321  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  2110320 gggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 2110221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 51 - 354
Target Start/End: Original strand, 45080416 - 45080717
Alignment:
Q  51 atagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactga 150  Q
    |||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  45080416 atagtactccctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagag--tgatacttttactga 45080513  T
Q  151 gttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtattta 250  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  45080514 gttgcccttatcattatgttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtattta 45080613  T
Q  251 taagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagg 350  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  45080614 taaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagg 45080713  T
Q  351 gagt 354  Q
    ||||    
T  45080714 gagt 45080717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 29194288 - 29193989
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29194288 tactccctccgtccctgaataagtgacctatttgaccatttcacacaaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 29194189  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  29194188 cccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatcgggaccacaaaaagtatttataag 29194089  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||  ||||||||||||    
T  29194088 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacacattttttttacaaataggtcacttattcagggacggagggagt 29193989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 55 - 353
Target Start/End: Original strand, 28585683 - 28585981
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||| ||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  28585683 tactccatccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 28585782  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  28585783 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataaa 28585882  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
     ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  28585883 gggtaaatctgtcaaattttgcttagaaatctgagaaggttaagtattgtgggataaatattttttacaaataggtcacttattcagggacggagggag 28585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 72 - 354
Target Start/End: Original strand, 4828106 - 4828388
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttg 171  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  4828106 aataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaaaagagtgatacttttactgagttgcccttgtcattattttg 4828205  T
Q  172 aaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||    
T  4828206 aaactttttcacttttaagtaatgattactttctttgttccactataaactttaacatggggaccacaaaaagtatttataaggggtaaatttgtcaaat 4828305  T
Q  272 tttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||    
T  4828306 tttgcttagaaatttgagaaggtcaaatattgtgggacaaatattttttacaaatatgtcacttattgagggacggagggagt 4828388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 54 - 330
Target Start/End: Original strand, 8381315 - 8381591
Alignment:
Q  54 gtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagtt 153  Q
    ||||||||||||||| | |||||||||  ||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  8381315 gtactccctccgtccctgaataagtgatctatttgaccatttcacacagattaagaaaaatgtaaagatgaaagaaatagagtgatacttttactgagtt 8381414  T
Q  154 gaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  8381415 gcccttgtcattattttgaaactttttcatttttaagtaatgattactttctttgttccactacaaattttaacatgaagaccacaaaaagtatttataa 8381514  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggt 330  Q
    | |||||||||||||||||||  |||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  8381515 ggggtaaatctgtcaaattttatttagaaatttgagaaggtcaagtatcgtgggacaaatattttttacaaataggt 8381591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 56 - 318
Target Start/End: Original strand, 1779073 - 1779335
Alignment:
Q  56 actccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttga 155  Q
    ||||| ||||||| | ||||  ||||||| |||| ||||||||| ||||||||||||||||||| |||||||||||| | ||||| ||||||||| |||     
T  1779073 actccttccgtccctcaatacttgacttacttgaccatttcacatagattaagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattgt 1779172  T
Q  156 ccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataaga 255  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||      
T  1779173 ctttgtcattattttgaaactttttcacttttaagtaatgattactttctttattccactacaaactttaacatggggaccacaaaaagtatttataaag 1779272  T
Q  256 ggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatatttt 318  Q
    ||||||||||| ||||| ||||||||||||||||||| |||   |||||||||||||||||||    
T  1779273 ggtaaatctgttaaattctgcttagaaatctgagaagatcaggcattgtgggacaaatatttt 1779335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 86 - 350
Target Start/End: Original strand, 42846942 - 42847202
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcactt 185  Q
    |||| |||||||||||||||| |||| ||| ||||||||||||  |||| ||||| ||||||| | ||| |||||| ||||||||||||  | |||||||    
T  42846942 ttgaccatttcacacagattatgaaaggtgcaaaaatgaaaga--gagaatgatatttttactaaattgtccttgttattattttgaaa--tcttcactt 42847037  T
Q  186 ttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatc 285  Q
    |||||||||||||| ||||||||||||| |||||||||| | |||  || ||||||||||||||||||| ||||||| ||||||||| |||||| |||||    
T  42847038 ttaagtaatgattattttctttgttccattacaaacttttacatggagaacacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatc 42847137  T
Q  286 tgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagg 350  Q
    ||| |||||||| |||| ||||||||||||||||| |||||||||||  |||| || ||||||||    
T  42847138 tgaaaaggtcaagtattatgggacaaatatttttttcaaataggtcaaatattaaaggacggagg 42847202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 9370643 - 9370486
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcactt 185  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||  ||||||||| ||| ||||||||||||||||||||||||||||||    
T  9370643 ttgaccatttcacacagattaagaaaagtgtaaagatgaaaaaaagaaaatgatttttttactgaattgtccttgtcattattttgaaactttttcactt 9370544  T
Q  186 ttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaa 243  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  9370543 ttaagtaatgattactttctttgtttcactacaaactttaatatggggatcacaaaaa 9370486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 64 - 320
Target Start/End: Original strand, 39646313 - 39646591
Alignment:
Q  64 cgtccttaaataagtgacttatttgatcatttcacacagattaagaaaag--tgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgt 161  Q
    ||||||| ||||  |||| ||||||| ||||||| ||||||||||||||   ||||||||||||||||||||| ||||| ||||||||| ||| ||||||    
T  39646313 cgtcctttaatacttgacatatttgaccatttcatacagattaagaaaaaaatgtaaaaatgaaagaaagagaatgatatttttactgaattgcccttgt 39646412  T
Q  162 cattattttgaaacttt---------------------ttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaa 240  Q
     ||||||||||||| ||                     ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  39646413 tattattttgaaaccttcacttttattattttgaaaccttcacttttaagtaatgattacttt-tttgttccactacaaacttttacatgaggaccacaa 39646511  T
Q  241 aaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatatttttt 320  Q
    |||||||||||||| ||||||| ||||||||| |  ||||||||||||||| ||||||||||||||||||||||||||||    
T  39646512 aaagtatttataaggggtaaatttgtcaaattctatttagaaatctgagaatgtcaaatattgtgggacaaatatttttt 39646591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 55 - 272
Target Start/End: Original strand, 43377208 - 43377423
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||||| ||||  |||| ||  | | ||||||| ||| ||||||||||||||||| |||||||||||| | ||||||||||||||| |||    
T  43377208 tactccctccgtccttcaatacttgacctacataaccatttcaaacaaattaagaaaagtgtaaagatgaaagaaagaaaatgatacttttactgaattg 43377307  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
      ||||| |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |  ||  ||| ||||||||||||||||||    
T  43377308 tacttgttattattttgaaac--cttcacttttaagtaatgattactttctttgttccactacaaacttttacttggagactacaaaaagtatttataag 43377405  T
Q  255 aggtaaatctgtcaaatt 272  Q
    || ||||| |||||||||    
T  43377406 agataaatttgtcaaatt 43377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 31921621 - 31921788
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | |||    
T  31921621 tactccctccgtccctgaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttactaaattg 31921720  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaacttt 224  Q
     |||| | |||||||| ||||   ||||||||||| |||| ||||||||  |||||||||||||| ||||    
T  31921721 cccttattattatttttaaac--cttcacttttaaataataattactttaattgttccactacaagcttt 31921788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 30422692 - 30422588
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||  | |||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  30422692 tactccctccgtcgctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaacgatgaaagaaagagagtgatacttttactgagttg 30422593  T
Q  155 acctt 159  Q
     ||||    
T  30422592 ccctt 30422588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 216
Target Start/End: Complemental strand, 16970418 - 16970295
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaag 190  Q
    ||||||||||| ||||||||||||||||| || ||||||||| | ||||| ||||||||| ||| |||| | |||||||| ||||   ||||||||||||    
T  16970418 catttcacacatattaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgcccttattattatttttaaac--cttcacttttaag 16970321  T
Q  191 taatgattactttctttgttccacta 216  Q
    |||||||||||||||||||| |||||    
T  16970320 taatgattactttctttgtttcacta 16970295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 25898880 - 25898766
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||| | | ||||||||||| | |||| |||||||||||||||||||| |||||||| |||||||||| | ||||||| ||||||||| |||    
T  25898880 tactccctccgttcctgaataagtgact-acttgaccatttcacacagattaagaagagtgtaaagatgaaagaaaaaaagtgatatttttactgaattg 25898782  T
Q  155 accttgtcattatttt 170  Q
     |||| | ||||||||    
T  25898781 cccttattattatttt 25898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 16964938 - 16964852
Alignment:
Q  233 gaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttt 319  Q
    |||||||||||||||||||||| ||||||  ||||||||||| |||| |||| |||||||||||| ||||||||||| ||| |||||    
T  16964938 gaccacaaaaagtatttataaggggtaaacttgtcaaattttacttaaaaatttgagaaggtcaagtattgtgggacgaattttttt 16964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 31922032 - 31922122
Alignment:
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttatt 338  Q
    ||||||| ||||||  |||||||||||||||  |||| |||||||||||| |||| |||||||| | ||||||||||||| ||||||||||    
T  31922032 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaatttttttttacaaatatgtcacttatt 31922122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 27922606 - 27922663
Alignment:
Q  83 tatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgata 140  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  27922606 tatttgatcatttcacacatattaagaaaagtgtaaagatgaaagaaagagaatgata 27922663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 25898552 - 25898464
Alignment:
Q  266 tcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||||  |||| |||||||||| | |||| ||||| || | ||||||||||||||||||||||||||  ||||||||||||    
T  25898552 tcaaattttgctttaaaatttgagaaggtcgagtattttgggataatttttttttacaaataggtcacttattcagggacggagggagt 25898464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 9725068 - 9724988
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagag 135  Q
    ||||||||||||||| |  ||| ||| | ||||  |||||||||||| ||||||||||||||| |||||||||| ||||||    
T  9725068 tactccctccgtcctaatttaattgagtcattttctcatttcacacatattaagaaaagtgtataaatgaaagagagagag 9724988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 18460642 - 18460605
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaaga 128  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  18460642 catttcacacagattaagaaaagtgtataaatgaaaga 18460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 20027066 - 20027125
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagt 114  Q
    |||||||||||||||  | ||||||| ||||||| |||||||| ||| ||||||||||||    
T  20027066 tactccctccgtcctagattaagtgagttatttgctcatttcagacatattaagaaaagt 20027125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 24356265 - 24356222
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||    
T  24356265 catttcacacagattaagaaaagtgtataaaggaaagagagaga 24356222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 7213630 - 7213594
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaa 126  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  7213630 tcatttcacacagattaagaaaaatgtataaatgaaa 7213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 7931436 - 7931480
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagag 135  Q
    ||||||||||||||||||||||||||| ||| |||| | ||||||    
T  7931436 catttcacacagattaagaaaagtgtataaaggaaatagagagag 7931480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 32556331 - 32556287
Alignment:
Q  84 atttgatcatttcacacagattaagaaaagtgtaaaaatgaaaga 128  Q
    ||||| |||||||||||| ||||||||||||||| || |||||||    
T  32556331 atttgttcatttcacacatattaagaaaagtgtataagtgaaaga 32556287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 41365893 - 41365853
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaa 112  Q
    ||||||||| ||||||| |||||||||||| ||||||||||    
T  41365893 aataagtgagttatttgttcatttcacacatattaagaaaa 41365853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 4041247 - 4040948
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  4041247 tactccctccgtcccttaataagtgacatatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagggagtgatacttttactgagttg 4041148  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  4041147 tccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaacaagtatttataag 4041048  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4041047 gggtaaatccgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagagacggagggagt 4040948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 40232115 - 40232414
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  40232115 tactccctccgtcccttaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 40232214  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  40232215 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 40232314  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40232315 gggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaggacggagggagt 40232414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 72 - 354
Target Start/End: Complemental strand, 29737688 - 29737406
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttg 171  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29737688 aataagtgacttatttgaccatttcacacagattaagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttgcccttgtcattattttg 29737589  T
Q  172 aaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaat 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  29737588 aaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaaat 29737489  T
Q  272 tttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  29737488 tttgcttagaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 27596086 - 27596384
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27596086 tactccctccgtccctaaataagtgacttatttgaccattttacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgggttg 27596185  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||||||     
T  27596186 cccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgtttcactacaaactttaacatg-ggaccacaaaaagtatttataaa 27596284  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  27596285 gggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 27596384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 55 - 338
Target Start/End: Complemental strand, 6392571 - 6392288
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||||| |||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  6392571 tactccctccgtccttgaataagtgacatattttaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttg 6392472  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  6392471 cccttgtcattattttgaaactttttcacttttaagtaatgattaatttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 6392372  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttatt 338  Q
     ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||    
T  6392371 gggtaaatctgtcaaattttgcttagaaatctgagaaggtaaagtattgtgggacaaatattttttacaaatagatcacttatt 6392288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 41427648 - 41427947
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||  ||||||| ||   ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||| |||    
T  41427648 tactccctccgtctctaaataaatggtctatttgatcatttcacacagattaaaaaaagtgtaaagatgaaagaaagagagtaatacttttattgaattg 41427747  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    
T  41427748 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgtttcactacaaactttaacatggggaccacaaaaagtatttataag 41427847  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  41427848 gggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattgtgggacaaatattttttacaaataggtcacttatttaaggacggagggagt 41427947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 63 - 354
Target Start/End: Original strand, 31689361 - 31689652
Alignment:
Q  63 ccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtc 162  Q
    |||||| |||||||||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  31689361 ccgtccctaaataagtgacatatttcaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtc 31689460  T
Q  163 attattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaat 262  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |||||| |||||||    
T  31689461 attattttgaaactttttcacttttaaaaaatgattactttctttgtttcactataaactttaacatgaggaccacaaaaagtatatataaggggtaaat 31689560  T
Q  263 ctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||| |||||||    
T  31689561 ctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacagatattttttacaaataggtcacttattcagggacgaagggagt 31689652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 55 - 353
Target Start/End: Original strand, 25943649 - 25943943
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| |||||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||||||| |||    
T  25943649 tactccctccgtccctgaataagtgacctatttgatcatttcaca--gattaagaaaattgtaaagatgaaagaaagagagtgatacttttactgaattg 25943746  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||    
T  25943747 ccattgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggac--cataaagtatttataag 25943844  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  25943845 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggag 25943943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 70 - 354
Target Start/End: Original strand, 24300169 - 24300443
Alignment:
Q  70 taaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattt 169  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||            
T  24300169 taaataagtgacatatttgaccatttcacacagattaagaaaagtgtgaagatgaaagaaagagagtgatacttttactgagttgcccttgt-------- 24300260  T
Q  170 tgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaa 269  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  24300261 --aaactttttcacttttaagtaatgattactttctttgtttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatctgtcaa 24300358  T
Q  270 attttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24300359 attttgcttagaaatttgataaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 24300443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 98 - 354
Target Start/End: Original strand, 38276588 - 38276844
Alignment:
Q  98 cacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagtaatgat 197  Q
    |||||||||||||||| ||||| |||||||||||||| ||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38276588 cacagattaagaaaagagtaaagatgaaagaaagagaatgatgtttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatgat 38276687  T
Q  198 tactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaa 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||    
T  38276688 tactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatatgaaaaggtcaa 38276787  T
Q  298 atattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||| |||||||||||  |||| |  ||||||||||||    
T  38276788 gtattgtgggacaaatatttttttcaaataggtcaagtattgagggacggagggagt 38276844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 91 - 354
Target Start/End: Original strand, 21442836 - 21443097
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaag 190  Q
    ||||||| ||||||||||||||||||||| |||||| ||| ||| ||||| ||||||| | ||| |||||| ||||||||||||||||  ||||||||||    
T  21442836 catttcatacagattaagaaaagtgtaaagatgaaaaaaatagaatgatatttttactaaattgcccttgttattattttgaaacttt--cacttttaag 21442933  T
Q  191 taatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgaga 290  Q
    ||||| ||||||||||| ||||||| |||||||| | |||  |||||||||||||||||||||| | ||||| ||||||||| | |||| ||||||||||    
T  21442934 taatggttactttctttattccactgcaaacttttacatggagaccacaaaaagtatttataagggataaatttgtcaaattctacttaaaaatctgaga 21443033  T
Q  291 aggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||| |||||||||||||||||||||| |||||||||||  |||| |  ||||||||||||    
T  21443034 aggtcaagtattgtgggacaaatatttttttcaaataggtcaagtattgagggacggagggagt 21443097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 124 - 332
Target Start/End: Complemental strand, 48838289 - 48838082
Alignment:
Q  124 aaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactt 223  Q
    ||||||||| | ||||| ||||||| | ||| |||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  48838289 aaagaaagaaaatgatatttttactaaattgtccttgttattattttaaaacttt--cacttttaagtaatgattactttctttgttccactacacactt 48838192  T
Q  224 taatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatatt-ttttac 322  Q
    | | |||  |||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| |||||||||||||||||| |||| |    
T  48838191 ttacatggagaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaagtcaagtattgtgggacaaatattttttttc 48838092  T
Q  323 aaataggtca 332  Q
    ||||||||||    
T  48838091 aaataggtca 48838082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 22338268 - 22338101
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| |||||||||||| || || | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||    
T  22338268 tactccctccgtccctaaataagtgacctacttaaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttactgaattg 22338169  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaacttt 224  Q
     |||| | |||||||| ||||   ||||||||||| |||| ||||||||   | ||||||||||||||||    
T  22338168 cccttattattatttttaaac--cttcacttttaaataataattactttaaatattccactacaaacttt 22338101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 72 - 224
Target Start/End: Complemental strand, 22620033 - 22619883
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttg 171  Q
    |||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||| | || | ||||||||     
T  22620033 aataagtgacctacttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttattgaattgcctttattattattttt 22619934  T
Q  172 aaactttttcacttttaagtaatgattactttctttgttccactacaaacttt 224  Q
    ||||   ||||||||||| |||| ||||||||  |||||||||||||||||||    
T  22619933 aaac--cttcacttttaaataataattactttaattgttccactacaaacttt 22619883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 22337818 - 22337711
Alignment:
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatatttttt-acaaataggtcacttattcaaagacg 346  Q
    ||||||| ||||||  |||||| ||||||||  |||| |||||||||||| |||| |||||||| | |||||| ||||||||||||||||||||  ||||    
T  22337818 ttataaggggtaaaattgtcaatttttgctttaaaatttgagaaggtcaagtattttgggacaattttttttttacaaataggtcacttattcagggacg 22337719  T
Q  347 gagggagt 354  Q
    ||||||||    
T  22337718 gagggagt 22337711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 22619615 - 22619525
Alignment:
Q  264 tgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||||||  |||| ||||||| |||| |||| ||  |||| | | ||||||||||||||||||||||||   |||||||||||    
T  22619615 tgtcaaattttgctttaaaatttgagaagatcaagtattttgaaacaattttattttacaaataggtcacttattcaggaacggagggagt 22619525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 45890772 - 45890854
Alignment:
Q  52 tagtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||||||||||| || ||| ||| ||||||| |||||||||||  |||||||||| |||| ||| ||| || |||||    
T  45890772 tagtactccctccgtcctgaattaactgagttatttgttcatttcacacgtattaagaaaaatgtataaaagaaggagagaga 45890854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 7380535 - 7380602
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaat 122  Q
    |||| |||||||| || |||||||||  || |||| ||||||||||||||||| |||||||| |||||    
T  7380535 tacttcctccgtctttgaataagtgatctacttgaccatttcacacagattaaaaaaagtgttaaaat 7380602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 30659433 - 30659476
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||    
T  30659433 catttcacacagattaagaaaagtgtacaaaggaaagagagaga 30659476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 1643270 - 1643315
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagag 135  Q
    |||||||||||| |||||||||| |||| |||||||||| ||||||    
T  1643270 tcatttcacacatattaagaaaaatgtataaatgaaagagagagag 1643315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 41427948 - 41427915
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttg 88  Q
    ||||||||||||||||||||||||||| ||||||    
T  41427948 tactccctccgtccttaaataagtgacctatttg 41427915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 25617788 - 25617732
Alignment:
Q  78 tgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||||||||||| ||||| ||||||||||   || ||||||||||| ||||    
T  25617788 tgacttatttgatcattttacacatattaagaaaaaattataaatgaaagaatgaga 25617732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 27821073 - 27820774
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  27821073 tactcccttcgtcctttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 27820974  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  27820973 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaattttaacatggggaccacaaaaagtatttataag 27820874  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  27820873 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacagagggagt 27820774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 350
Target Start/End: Complemental strand, 17493826 - 17493531
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  17493826 tactccctccgtccctgaataagtgacctatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttg 17493727  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  17493726 cccttgtcattattttgaaactttttcatttttaagtaatgattactttatttgttccactacaaactttaacatggggaccacaaaaagtatttataag 17493627  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagg 350  Q
     |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  17493626 gggtaaatctgtcaaattttgtttagaaatctgagaagatcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagg 17493531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 18575328 - 18575029
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18575328 tactccctccgtccctgaataagtgacctatttgatcatttcacacaaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 18575229  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  18575228 cccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 18575129  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    || ||||| |||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||    
T  18575128 agataaatttgtcaaattttgcttagaaatctgagaaggtcgagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagt 18575029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 58 - 354
Target Start/End: Original strand, 38069898 - 38070194
Alignment:
Q  58 tccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgacc 157  Q
    ||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  38069898 tccctccgtccttgaacaagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagatagtgatacttttactgagttgccc 38069997  T
Q  158 ttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagagg 257  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||  ||    
T  38069998 ttgtcattattttgaaactttttcatttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataatggg 38070097  T
Q  258 taaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  38070098 taaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacagagggagt 38070194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 11254800 - 11254501
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| |||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11254800 tactccctccgtccctgaataagtgacctatttgaccattccacataaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 11254701  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  11254700 cccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataaa 11254601  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||    
T  11254600 gggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagt 11254501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 55 - 350
Target Start/End: Complemental strand, 39907208 - 39906916
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39907208 tactccctccgtcccttaataagtgacttatttgaccattttacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 39907109  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  39907108 cccttatcattattttgaaattttttcacttttaagtaatgattactttctttgttccactacaaactttaacat--ggaccacaaaaagtatttataag 39907011  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagg 350  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| |||||||||||  ||||||||    
T  39907010 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaata-tttttataaatagatcacttattcagggacggagg 39906916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 55 - 352
Target Start/End: Original strand, 12738366 - 12738663
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    ||||| |||||||| | ||||  |||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| | ||||| ||||||||| |||    
T  12738366 tactctctccgtccctcaatacttgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattg 12738465  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||||||||    
T  12738466 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggatcacaaaaaatatttataag 12738565  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggaggga 352  Q
     ||||||| ||||||||| ||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||| |||  |||| | |||||||||||    
T  12738566 gggtaaatttgtcaaattctgcttagaaatctgataaggtcaagtattatgggacaaatattttttccaaatagatcaagtattgagagacggaggga 12738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 78 - 354
Target Start/End: Original strand, 17335994 - 17336269
Alignment:
Q  78 tgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactt 177  Q
    |||| |||||||  |||||||| | |||||||||| |||||| |||||||||||||| ||||| |||||||||  || ||||||||||||||||||||||    
T  17335994 tgacctatttgacaatttcacataaattaagaaaa-tgtaaagatgaaagaaagagaatgatatttttactgaactgtccttgtcattattttgaaactt 17336092  T
Q  178 tttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgct 277  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||| ||||    
T  17336093 tttcacttttaagtaatgattactttcgttgttccactagaaactttaacatgggaaccacaaaaagtatttataaggggtaaatctgtcaaattctgct 17336192  T
Q  278 tagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||| |||||||||| |||| |||||||||||||||||  ||||||||||  |||| | |||||||||||||    
T  17336193 tagaaatctaagaaggtcaagtattatgggacaaatattttttcaaaataggtcaagtattgagagacggagggagt 17336269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 9754069 - 9753771
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | ||||  |||| || |||| ||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||| |||    
T  9754069 tactccctccgtccctcaatacttgacctacttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattg 9753970  T
Q  155 accttgtca-ttattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
     |||||| | |||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||| | ||   ||||||||||| |||||||||    
T  9753969 tccttgttaattattttgaaacctt--cacttttaagtaatgattactttctttgtttcactacaaacttttacattgagaccacaaaaaatatttataa 9753872  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||  ||||||||||  |||| |  |||||||||||    
T  9753871 gaggtaaatttgtcaaattctgcttagaaatttgagaaggtcaagtattatgggacaaatattttttttaaataggtcaagtattgagggacggagggag 9753772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 327
Target Start/End: Original strand, 13243574 - 13243818
Alignment:
Q  82 ttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtca-ttattttgaaacttttt 180  Q
    |||||||| |||||||||| |||||||||||||||||| || ||||||||| | ||||| ||||||||| ||| |||||| | |||||||||||| ||      
T  13243574 ttatttgaccatttcacaccgattaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgtccttgttaattattttgaaacctt-- 13243671  T
Q  181 cacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttag 280  Q
    || |||||||||||||||| |||||||||||||||||||||||| | ||   |||||||||||||||||||||| ||| ||| ||||||||| |||||||    
T  13243672 catttttaagtaatgattattttctttgttccactacaaacttttacattgagaccacaaaaagtatttataaggggtgaatttgtcaaattctgcttag 13243771  T
Q  281 aaatctgagaaggtcaaatattgtgggacaaatattttttacaaata 327  Q
    |||| |||||||||||||||||||| |||| ||||||||| ||||||    
T  13243772 aaatttgagaaggtcaaatattgtgagacatatattttttccaaata 13243818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 55 - 224
Target Start/End: Complemental strand, 11147949 - 11147782
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||| |||    
T  11147949 tactccctccgtccctgaataagtgacctacttgatcatttcacacagattaagaaaagtgtaaagatgaaaggaagagaatgatatttttactgaattg 11147850  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaacttt 224  Q
     |||| | |||||||| ||||   ||||||||||| |||| ||||||||  |||||||||||||||||||    
T  11147849 cccttattattatttttaaac--cttcacttttaaataataattactttaattgttccactacaaacttt 11147782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 29638455 - 29638412
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  29638455 catttcacacagattaagaaaagtgtataaatgaaagaaagaga 29638412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 11146861 - 11146771
Alignment:
Q  264 tgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||| ||  |||| ||| |||||||| |||| ||  |||| | |||||||||||||| |||||||||||| |||||| |||||    
T  11146861 tgtcaaattttgttttaaaatttgataaggtcaagtattttgaaacaatttttttttacaaatagatcacttattcaaggacggaaggagt 11146771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 5878178 - 5878222
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagag 135  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  5878178 catttcacatagattaagaaaagtgtataaatgaaagagagagag 5878222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 70053 - 69754
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  70053 tactccctccgtccctaaataagtgacttatttgaccatttgatacagattaagaaaagtgtaaagatgaaagaaagagagtgataattttactgagttg 69954  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||    
T  69953 tccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatacggggatcacaaaaagtatttataag 69854  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  69853 cggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaatatgtcacttattcagggacggagggagt 69754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 46862856 - 46862557
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  46862856 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttcctgagttg 46862757  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  46862756 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 46862657  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  46862656 gggtaaatctgtcaaattttgcttaaaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 46862557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 58 - 354
Target Start/End: Original strand, 39150900 - 39151196
Alignment:
Q  58 tccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgacc 157  Q
    ||||||||||| | |||||||||  ||||||| |||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||| ||    
T  39150900 tccctccgtcccttaataagtgatctatttgaccatttcacacagattaagaaaaatgtaaagataaaagaaagagaatgatacttttactgagttgccc 39150999  T
Q  158 ttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagagg 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  39151000 ttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatgaggaccacaaaaagtatttataagggg 39151099  T
Q  258 taaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  39151100 taaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagagagt 39151196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 1929217 - 1929515
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  1929217 tactccctccgtccctgaataagtgacatatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttg 1929316  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  1929317 cccttgtcattattttgaaactttttcacttttaagtaatgatt-ttttttttgttccactacaaactttaacatggggaccacaaaaaatatttataag 1929415  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  1929416 gggtaaatctgtcaaattttgcttagaaatatgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttatttagggacggagggagt 1929515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 32046133 - 32045834
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||| ||  | ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32046133 tactccctccatcactgaataagtgatttatttgaccatttcacacagattaagaaaagtgtaaaaatgaaagaaagaaagtgatacttttaccgagttg 32046034  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  32046033 cccttgtcgttattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 32045934  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||  ||||||||||||    
T  32045933 gggtaaatctttcaaattttgcttagaaatctgagaaggtcaagtattgtggaacaaatattttttacaaatagatcacttattcagggacggagggagt 32045834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 28036700 - 28037000
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatactttt-actgagtt 153  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||| ||||||||    
T  28036700 tactcccttcgtcccttaataagtgacttatttgaccatttcacacaaattaagaaaagtgtaaagataaaagaaagagagtgatattttttactgagtt 28036799  T
Q  154 gaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28036800 gcccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataa 28036899  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
    | | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |  |||||||||||    
T  28036900 gggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcatttattaagggacggagggag 28036999  T
Q  354 t 354  Q
    |    
T  28037000 t 28037000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 55 - 338
Target Start/End: Complemental strand, 50777297 - 50777014
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  50777297 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 50777198  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  50777197 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccccaaaaagtatttataag 50777098  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttatt 338  Q
     ||||||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  50777097 gggtaaatctgtcaaattttgcttagaaatttaagaaggtcaagtattatgggacaaatattttttacaaataagtcacttatt 50777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 91 - 354
Target Start/End: Complemental strand, 38321909 - 38321646
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttgaaactttttcacttttaag 190  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38321909 catttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaactttttcacttttaag 38321810  T
Q  191 taatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgaga 290  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||    
T  38321809 taatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataagggttaaatcttttaaattttgcttagaaatctgaga 38321710  T
Q  291 aggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  38321709 aggtcaagtattgtgggacaaatattttttacaaataggtcagttattcagggacggagggagt 38321646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 59 - 354
Target Start/End: Complemental strand, 46371217 - 46370928
Alignment:
Q  59 ccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgacct 158  Q
    |||||||||| | |||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||    
T  46371217 ccctccgtcccttaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgaattgccct 46371118  T
Q  159 tgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggt 258  Q
    ||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  46371117 tgtcattattttgaaactttttca-----aagtaatgattactttctttgttccactacaaactttaatatg-ggaccacaaaaagtatttataaggggt 46371024  T
Q  259 aaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  46371023 aaatttgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 46370928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 72 - 354
Target Start/End: Complemental strand, 8229347 - 8229064
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaaga-gagtgatacttttactgagttgaccttgtcattatttt 170  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||| | |||||||| ||||||||||||| |||||||||||||||    
T  8229347 aataagtgatttatttgaccatttcacacagattaagaaaagtgtaaagatgaaaaaaaaaagagtgatatttttactgagttgcccttgtcattatttt 8229248  T
Q  171 gaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagaggtaaatctgtcaaa 270  Q
     |||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||    
T  8229247 aaaactttttcacttttaagtaatgattactttctttatttcactacaaactttaacatggggaccacaaaaagtatttataaggggtaaatttgtcaaa 8229148  T
Q  271 ttttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||| |||||| ||||||| || ||||| || |||||||||||||| ||||||||||||||||||  ||||||||||||    
T  8229147 ttttgcttaaaaatctaagaaggttaagtattgaggaacaaatattttttataaataggtcacttattcagggacggagggagt 8229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 1207452 - 1207749
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | ||||  |||| || |||| ||||||||||||||||||||||||||| | |||||||||||| | ||||| ||||||||| |||    
T  1207452 tactccctccgtcccttaatacttgacctacttgaccatttcacacagattaagaaaagtgtagagatgaaagaaagataatgatatttttactgaattg 1207551  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatat-gaggaccacaaaaagtatttataa 253  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || | ||||  | ||||||||||||||    
T  1207552 cccttgtcattattttgaaactttttcacttttaagtaatgattactttccttgttcctctacaaactttaacataggggac--ccaaaagtatttataa 1207649  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
    | ||||||||||||||||| |||||||||||||||||||||||| |||| |  |||||||||||||| |||||||||||  |||| || |||||||||||    
T  1207650 g-ggtaaatctgtcaaattctgcttagaaatctgagaaggtcaagtattataagacaaatatttttttcaaataggtcaaatattgaaggacggagggag 1207748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 55 - 332
Target Start/End: Original strand, 40562436 - 40562711
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | ||||  |||| || |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||    
T  40562436 tactccctccgtccctcaatacttgacctacttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattg 40562535  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| | |||  ||||||||| ||||||||||||    
T  40562536 cccttgttattattttgaaactttt--acttttaagtaatgattactttctttgttctactacaaacttttacatggagaccacaaagagtatttataag 40562633  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtca 332  Q
     ||||||| | ||||||| |||||| |||| |||||| ||||| |||||||||||||||||||||| |||||||||||    
T  40562634 gggtaaatttatcaaattctgcttaaaaatatgagaatgtcaagtattgtgggacaaatatttttttcaaataggtca 40562711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 55 - 328
Target Start/End: Original strand, 9129401 - 9129675
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatact---tttactgag 151  Q
    ||||||||| |||| | |||| ||||  || ||||  |||||||| ||||||| ||||||||||| || ||||||||||| ||||| |   |||||| |     
T  9129401 tactccctcggtccctcaatacgtgatatacttgactatttcacaaagattaacaaaagtgtaaagataaaagaaagagaatgataatatttttactcaa 9129500  T
Q  152 ttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttat 251  Q
    ||| |||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||| | |||  ||||||||||| |||||||    
T  9129501 ttgtccttgttattatttttaaacttt--cacttttaagtaatgattactttctttgttccactacaaaattttacatggagaccacaaaaaatatttat 9129598  T
Q  252 aagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaatag 328  Q
    ||| ||||||| | ||||||| |||||| |||||||||||||| ||||||| || || ||||||||||| |||||||    
T  9129599 aaggggtaaatttatcaaattctgcttaaaaatctgagaaggtaaaatattatgagataaatatttttttcaaatag 9129675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 142 - 328
Target Start/End: Complemental strand, 38817984 - 38817801
Alignment:
Q  142 ttttactgagttgaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaa 241  Q
    ||||| ||| ||| |||||| ||||||||||||| ||  || ||||||||||| ||||||||||||||| ||||||||||||| | ||| ||||||||||    
T  38817984 ttttattgaattgtccttgttattattttgaaacctt--ca-ttttaagtaattattactttctttgtttcactacaaacttttacatggggaccacaaa 38817888  T
Q  242 aagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaatag 328  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| |||||||    
T  38817887 aagtatttataaggggtaaatttatcaaattttgcttagaaatttgagaaagtcaaatattatgggacaaatatttttttcaaatag 38817801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 36326154 - 36326202
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  36326154 ttgaacatttcacacagattaagaaaagtgtataaatgaaagagagaga 36326202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 42926324 - 42926245
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||||||||  | ||||||| | ||| |||||||| ||||| |||||||||| |||| ||||||| ||||||||    
T  42926324 tactccctccgtcctggattaagtgagtcattcgatcatttgacacatattaagaaaaatgtataaatgaatgaaagaga 42926245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 20986544 - 20986581
Alignment:
Q  93 tttcacacagattaagaaaagtgtaaaaatgaaagaaa 130  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  20986544 tttcacacagattaagaaaagtgtataaatgaaagaaa 20986581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 50334080 - 50334035
Alignment:
Q  89 atcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  50334080 atcatttcatacagattaagaaaagtgtataaacgaaagaaagaga 50334035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 6552159 - 6552209
Alignment:
Q  84 atttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||| |||||||||||||||||||||||   | ||||||||||||||||    
T  6552159 atttgaccatttcacacagattaagaaaagatgacaaatgaaagaaagaga 6552209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 14222899 - 14222837
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||| || ||| |||||||||||| |||||| ||||  || ||||||||||||||||    
T  14222899 aataagtgacatacttgctcatttcacacaaattaaggaaagactataaatgaaagaaagaga 14222837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Original strand, 47792147 - 47792189
Alignment:
Q  93 tttcacacagattaagaaaagtgtaaaaatgaaagaaagagag 135  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||    
T  47792147 tttcacacagattaagaaaagtgtataaatcaaagagagagag 47792189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 5359236 - 5359277
Alignment:
Q  93 tttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    ||||||||||||||||||||||||| |||| ||||| |||||    
T  5359236 tttcacacagattaagaaaagtgtataaataaaagagagaga 5359277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 9590673 - 9590625
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||| ||||||||| |||||||||||| |||| |||||||||| |||||    
T  9590673 ttgaccatttcacatagattaagaaaattgtataaatgaaagagagaga 9590625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 27209916 - 27209964
Alignment:
Q  86 ttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||| ||||| ||||| ||||||||||||||| |||||||||| |||||    
T  27209916 ttgaccattttacacatattaagaaaagtgtataaatgaaagagagaga 27209964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 14044355 - 14044057
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  14044355 tactccctccgtccctgaataagtgacctatttgatcatttcacacgtattaagaaaagtgtaaagatgaaagaaagagagtgatacttt-actaagttg 14044257  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  14044256 cccttgtcattattttgaaactttttcacttttaaataatgattactttatttgttccactacaaactttaacatggggaccacaaaaagtatttataag 14044157  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  14044156 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattatgggacaaatattttttacaaataggtcacttattcagggacggagggagt 14044057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 55 - 354
Target Start/End: Complemental strand, 36982486 - 36982187
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  36982486 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttg 36982387  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  36982386 cccttgtcattattttgaaactttttcacttttaagtaatgattattttatttgttccactacaaactttaacatggggaccacaaaaagtatttataag 36982287  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  36982286 gggtaaatctgtcaaattttgcctagaaatatgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 36982187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 55 - 322
Target Start/End: Original strand, 42897374 - 42897641
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42897374 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 42897473  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  42897474 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggaccacaaaaagtatttataag 42897573  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttac 322  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42897574 gggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttac 42897641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 2970666 - 2970963
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    ||||||||| |||| | ||||  |||| || |||| |||||||||||||||||||||| |||||| |||||||||||| | ||||| ||| ||||| |||    
T  2970666 tactccctctgtccctcaatatttgacctacttgaccatttcacacagattaagaaaaatgtaaagatgaaagaaagataatgatattttcactgaattg 2970765  T
Q  155 accttgtca-ttattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataa 253  Q
     |||||| | |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||||||||||     
T  2970766 cccttgttaattattttgaaacctt--cacttttaagtaatgattactttctttgttccactacaaactttacattgag-accacaaaaagtatttatac 2970862  T
Q  254 gaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggag 353  Q
    | ||||||| ||||||||| ||||||||||| |||||| ||||| |||||||||||||||||||||| |||||||||||  |||| |  |||||||||||    
T  2970863 ggggtaaatttgtcaaattctgcttagaaatttgagaatgtcaagtattgtgggacaaatatttttttcaaataggtcaagtattgagggacggagggag 2970962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 36767875 - 36768039
Alignment:
Q  54 gtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagtt 153  Q
    ||||||| ||| ||| | |||||||||| ||||||| || |||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||    
T  36767875 gtactccgtccctccctgaataagtgacctatttgaccacttcacacagattaaaaagagtgtaaagatgaaagaaagagagtgatatttttactgaatt 36767974  T
Q  154 gaccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaa 220  Q
    | |||| | |||||||| ||||   ||||||||||| ||||||||||||||||||||||||||||||    
T  36767975 gcccttattattatttttaaac--cttcacttttaaataatgattactttctttgttccactacaaa 36768039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 221
Target Start/End: Complemental strand, 33404512 - 33404365
Alignment:
Q  72 aataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgaccttgtcattattttg 171  Q
    |||||||||| || |||||||||| |||||||||||||||| |||||| |||||||||||||||||||| ||||||||| ||| |||| | ||||||||     
T  33404512 aataagtgacctacttgatcattttacacagattaagaaaaatgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattattttt 33404413  T
Q  172 aaactttttcacttttaagtaatgattactttctttgttccactacaaac 221  Q
    |||| |||  |||||||| |||| ||||||||  ||||||||||||||||    
T  33404412 aaaccttt--acttttaaataataattactttaattgttccactacaaac 33404365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 5712717 - 5712600
Alignment:
Q  54 gtactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagtt 153  Q
    ||||||||||||||| | ||||| |||| || |||| |||| ||||||||||||||||| |||||| |||||||||||| ||||||| |||| |||| ||    
T  5712717 gtactccctccgtccctgaataaatgacctacttgaccattccacacagattaagaaaaatgtaaagatgaaagaaagaaagtgatattttttctgaatt 5712618  T
Q  154 gaccttgtcattattttg 171  Q
    | |||| | |||||||||    
T  5712617 gcccttattattattttg 5712600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 354
Target Start/End: Complemental strand, 33403301 - 33403195
Alignment:
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacgg 347  Q
    ||||||| ||||||  |||||||||||||||  |||| |||||||||||| |||| | |||||| | |||||||||||||| |||||||||||  |||||    
T  33403301 ttataaggggtaaaattgtcaaattttgctttaaaatttgagaaggtcaagtattttaggacaatttttttttacaaatagatcacttattcagggacgg 33403202  T
Q  348 agggagt 354  Q
    |||||||    
T  33403201 agggagt 33403195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 248 - 354
Target Start/End: Original strand, 36768782 - 36768888
Alignment:
Q  248 ttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacgg 347  Q
    ||||||| ||||||  |||||||||||||||  |||| ||| |||||| | |||| |||||||| | ||||  | ||||||||||||||||||  |||||    
T  36768782 ttataaggggtaaaattgtcaaattttgctttaaaatttgataaggtcgagtattttgggacaatttttttaaaaaaataggtcacttattcagggacgg 36768881  T
Q  348 agggagt 354  Q
    |||||||    
T  36768882 agggagt 36768888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 4044433 - 4044467
Alignment:
Q  92 atttcacacagattaagaaaagtgtaaaaatgaaa 126  Q
    |||||||||||||||||||||||||| ||||||||    
T  4044433 atttcacacagattaagaaaagtgtataaatgaaa 4044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 4475404 - 4475355
Alignment:
Q  85 tttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||| ||||| |||||| ||||||||||||||| || |||||||||||||    
T  4475404 tttgttcattgcacacatattaagaaaagtgtataagtgaaagaaagaga 4475355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 4576358 - 4576407
Alignment:
Q  85 tttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||| |||||||||||| |||||||||| |||| |||||||| |||||||    
T  4576358 tttgctcatttcacacatattaagaaaaatgtataaatgaaaaaaagaga 4576407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 11099430 - 11099474
Alignment:
Q  90 tcatttcacacagattaagaaaagtgtaaaaatgaaagaaagaga 134  Q
    |||||||||||| |||||||||| |||| |||||||||| |||||    
T  11099430 tcatttcacacatattaagaaaaatgtataaatgaaagagagaga 11099474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 10593 - 10892
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | |||||||||| ||||||| |||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10593 tactccctccgtccctgaataagtgacctatttgaccattccacataaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 10692  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  10693 cccttgtcattattttgaaactttttcacttttaagtaatgattattttctttgttccactacaaactttaacatggggaccacaaaaagtatttataaa 10792  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||    
T  10793 gggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagt 10892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 10017 - 10316
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||| ||| | |||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  10017 tactccctccatcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatatttttactgagttg 10116  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  10117 cccttgttattattttgaaactttttcacttttaagtaatgattactttctttgttccactataaactttaacatggggaccacaaaaagtatttataag 10216  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
     | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||   |||||||||||    
T  10217 ggataaatctgtcaaattttgcttagaaatatgagaaggtcaagtattgtgggacaaatattttttacaaatagatcacttattcaggaacggagggagt 10316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 55 - 335
Target Start/End: Complemental strand, 4114 - 3834
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | ||||| | |  ||||||| ||||||||||||||||||||||| ||||| |||||| ||| |||| | |||||||||||||||     
T  4114 tactccctccgtccctgaataaataatctatttgaccatttcacacagattaagaaaagggtaaagatgaaaaaaaaagagcgctacttttactgagtta 4015  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  4014 cccttgtcattattttaaaactttttcacttttaagtaatgattactttctttgttccattacaaactttaacatgaggaccgcaaaaagtatttataag 3915  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcactt 335  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  3914 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtcactt 3834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 58 - 354
Target Start/End: Complemental strand, 16641 - 16358
Alignment:
Q  58 tccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttgacc 157  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||             |||| |     
T  16641 tccctccgtccctaaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtg-------------gttgcct 16555  T
Q  158 ttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataagagg 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||  ||    
T  16554 ttgtcattattttgaaactttttcacttttaagtaatgattactttctttgtttcactacaaactttaacatggggaccacaaaaagtatttataaaggg 16455  T
Q  258 taaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  16454 taaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagt 16358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 55 - 235
Target Start/End: Original strand, 92169 - 92349
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||| | | |||||||||| ||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  92169 tactccctccgttcctgaataagtgacctatgtgaccatttcacatagattaagaaaagtgtaaagatgaaagaaagagagtgacacttttactgagttg 92268  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggac 235  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  92269 cccttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaacatggggac 92349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 92374 - 92419
Alignment:
Q  309 caaatattttttacaaataggtcacttattcaaagacggagggagt 354  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  92374 caaatattttttacaaatagatcacttattcagagacggagggagt 92419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1194 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 330
Target Start/End: Complemental strand, 1267 - 1004
Alignment:
Q  55 tactccctccgtccttaaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaaaatgaaagaaagagagtgatacttttactgagttg 154  Q
    |||||||||||||| | ||||  | || || |||| ||||||||||| ||||| | ||||||||| |||||||||||||| ||||| ||||||||| |||    
T  1267 tactccctccgtccctcaatacttcacctacttgaccatttcacacaaattaa-acaagtgtaaagatgaaagaaagagaatgatatttttactgaattg 1169  T
Q  155 accttgtcattattttgaaactttttcacttttaagtaatgattactttctttgttccactacaaactttaatatgaggaccacaaaaagtatttataag 254  Q
      ||||| ||||||||||||| ||  ||||||||||||||||||         ||||||||||||||||| | |||  ||||||||||||||||||||||    
T  1168 ctcttgttattattttgaaacctt--cacttttaagtaatgatt---------gttccactacaaacttttacatggagaccacaaaaagtatttataag 1080  T
Q  255 aggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattgtgggacaaatattttttacaaataggt 330  Q
     ||||||| ||||||||  |||||| |||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  1079 gggtaaatttgtcaaatcctgcttaaaaatctgagaagctcaagtattgtgggacaaatattttttccaaataggt 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 352414 - 352453
Alignment:
Q  89 atcatttcacacagattaagaaaagtgtaaaaatgaaaga 128  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  352414 atcatttcacacagattaagaaaagtgtataaataaaaga 352453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 6353 - 6397
Alignment:
Q  91 catttcacacagattaagaaaagtgtaaaaatgaaagaaagagag 135  Q
    |||||||||||||||||||||| |||| ||| |||||| ||||||    
T  6353 catttcacacagattaagaaaaatgtataaaggaaagagagagag 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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