View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12055_low_55 (Length: 267)
Name: NF12055_low_55
Description: NF12055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12055_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 38351138 - 38351378
Alignment:
| Q |
12 |
atgaagtgcatggttaactaaaattcccggtagatgatctcaagattatcaactattttaatttgacctacgggatctattacagtagagtacttttgtg |
111 |
Q |
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| T |
38351138 |
atgaagtgcatggttaactaaaattccgggtagatgatctcaagattatcaactattttaatttgacctacgggatctattacagtagagtacttttgtg |
38351237 |
T |
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| Q |
112 |
aaattaaatcactctaaatttgnnnnnnnaacggtaaatattgaatatattaataatggataaaagtacaagtaatactaaacctaaaatatgagagtaa |
211 |
Q |
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|||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
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| T |
38351238 |
aaattacatcactctaaattcgtttttttcacggtaaatattgaatatattaataatggataaaagtagaagtaatactaaacctaaaatatgagtgtaa |
38351337 |
T |
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| Q |
212 |
gtataagtgacactacatccattgtctggttagcaacgaag |
252 |
Q |
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| T |
38351338 |
gtataagtgacactacatccattgtctggttagcaacgaag |
38351378 |
T |
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