View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12055_low_74 (Length: 229)

Name: NF12055_low_74
Description: NF12055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12055_low_74
NF12055_low_74
[»] chr4 (37 HSPs)
chr4 (10-194)||(9908751-9908935)
chr4 (30-169)||(50543505-50543646)
chr4 (30-164)||(22231248-22231382)
chr4 (29-166)||(40717380-40717517)
chr4 (38-194)||(7926308-7926464)
chr4 (32-166)||(6218212-6218346)
chr4 (32-169)||(35788664-35788802)
chr4 (30-166)||(35819068-35819204)
chr4 (30-169)||(34357970-34358109)
chr4 (31-173)||(32002323-32002465)
chr4 (30-164)||(12869203-12869337)
chr4 (32-169)||(11036688-11036825)
chr4 (37-103)||(13555424-13555490)
chr4 (30-95)||(28245701-28245766)
chr4 (30-166)||(9685406-9685542)
chr4 (31-103)||(30530103-30530175)
chr4 (30-166)||(35796917-35797053)
chr4 (30-166)||(53814869-53815005)
chr4 (30-168)||(22822356-22822495)
chr4 (30-95)||(4905676-4905741)
chr4 (29-81)||(27634255-27634307)
chr4 (29-101)||(31944996-31945067)
chr4 (122-169)||(400597-400644)
chr4 (107-194)||(12005486-12005573)
chr4 (97-172)||(21646272-21646347)
chr4 (47-137)||(22445489-22445579)
chr4 (32-93)||(26549504-26549566)
chr4 (122-172)||(35609522-35609572)
chr4 (87-169)||(36685872-36685954)
chr4 (30-95)||(40716560-40716626)
chr4 (47-180)||(6666592-6666725)
chr4 (40-93)||(21646451-21646504)
chr4 (112-169)||(28246107-28246164)
chr4 (40-113)||(43743050-43743123)
chr4 (89-169)||(22845446-22845526)
chr4 (30-74)||(25324209-25324253)
chr4 (31-95)||(49190120-49190184)
[»] chr2 (27 HSPs)
chr2 (30-168)||(15124723-15124861)
chr2 (29-169)||(2029774-2029914)
chr2 (31-139)||(16419302-16419410)
chr2 (38-169)||(17719405-17719536)
chr2 (38-168)||(40379392-40379522)
chr2 (30-169)||(14466350-14466489)
chr2 (30-169)||(36352099-36352238)
chr2 (32-197)||(33606231-33606397)
chr2 (30-169)||(5711614-5711754)
chr2 (30-130)||(93294-93394)
chr2 (37-81)||(44404109-44404153)
chr2 (30-166)||(2324248-2324384)
chr2 (30-81)||(18607184-18607235)
chr2 (122-188)||(15988199-15988265)
chr2 (30-130)||(93567-93667)
chr2 (30-166)||(5509087-5509223)
chr2 (29-93)||(34893506-34893570)
chr2 (122-168)||(94052-94098)
chr2 (107-169)||(16533552-16533614)
chr2 (40-154)||(24395883-24395997)
chr2 (30-76)||(37812443-37812489)
chr2 (29-103)||(40149175-40149249)
chr2 (38-166)||(13210534-13210663)
chr2 (30-95)||(17525274-17525338)
chr2 (40-85)||(30701208-30701253)
chr2 (31-79)||(13764492-13764540)
chr2 (89-169)||(16419507-16419587)
[»] chr7 (26 HSPs)
chr7 (32-169)||(26239857-26239995)
chr7 (37-169)||(25620141-25620273)
chr7 (29-169)||(36277165-36277305)
chr7 (30-169)||(1596599-1596737)
chr7 (30-169)||(21861299-21861438)
chr7 (32-139)||(28080699-28080806)
chr7 (30-169)||(29469610-29469749)
chr7 (40-169)||(31485609-31485738)
chr7 (29-103)||(22574672-22574746)
chr7 (37-169)||(33996261-33996390)
chr7 (29-166)||(10903093-10903230)
chr7 (38-103)||(44874526-44874591)
chr7 (30-166)||(34027401-34027537)
chr7 (37-169)||(48661502-48661634)
chr7 (32-95)||(31892231-31892294)
chr7 (37-103)||(9689047-9689113)
chr7 (39-156)||(4886347-4886464)
chr7 (40-128)||(33834237-33834325)
chr7 (32-169)||(4506937-4507074)
chr7 (65-169)||(3038059-3038163)
chr7 (32-166)||(26562015-26562149)
chr7 (30-88)||(32279011-32279069)
chr7 (122-166)||(2544479-2544523)
chr7 (123-191)||(5871988-5872055)
chr7 (73-173)||(21213025-21213124)
chr7 (122-166)||(23839109-23839153)
[»] chr3 (28 HSPs)
chr3 (37-169)||(54567897-54568029)
chr3 (30-167)||(4155331-4155468)
chr3 (31-174)||(45828019-45828162)
chr3 (28-169)||(49629610-49629751)
chr3 (30-166)||(1723016-1723152)
chr3 (31-194)||(13574861-13575025)
chr3 (31-169)||(16239596-16239735)
chr3 (30-169)||(35038368-35038507)
chr3 (30-166)||(20327789-20327925)
chr3 (53-169)||(54368521-54368637)
chr3 (33-166)||(11589793-11589926)
chr3 (37-93)||(34992687-34992743)
chr3 (122-193)||(50052571-50052643)
chr3 (42-169)||(16926901-16927028)
chr3 (32-169)||(12930069-12930207)
chr3 (38-139)||(20303333-20303434)
chr3 (89-169)||(35038193-35038273)
chr3 (122-194)||(45828226-45828298)
chr3 (29-103)||(11659620-11659695)
chr3 (122-169)||(50083113-50083160)
chr3 (33-146)||(33640073-33640187)
chr3 (89-155)||(34610580-34610646)
chr3 (107-169)||(45138819-45138881)
chr3 (30-92)||(46139344-46139406)
chr3 (29-62)||(27670332-27670365)
chr3 (48-103)||(2806126-2806182)
chr3 (33-81)||(24866136-24866184)
chr3 (29-89)||(39269159-39269219)
[»] chr5 (25 HSPs)
chr5 (30-169)||(41666932-41667072)
chr5 (29-166)||(25258240-25258377)
chr5 (29-166)||(25322030-25322167)
chr5 (30-169)||(24346676-24346816)
chr5 (30-135)||(32908892-32908997)
chr5 (37-169)||(9368600-9368732)
chr5 (37-169)||(15480327-15480459)
chr5 (30-169)||(24270045-24270184)
chr5 (39-169)||(2063683-2063812)
chr5 (47-169)||(24528545-24528667)
chr5 (31-169)||(24531604-24531742)
chr5 (37-95)||(95448-95506)
chr5 (29-95)||(43117726-43117792)
chr5 (30-169)||(18333639-18333779)
chr5 (89-173)||(60088-60172)
chr5 (30-166)||(21209861-21209997)
chr5 (83-167)||(15480564-15480650)
chr5 (30-93)||(17150408-17150471)
chr5 (37-103)||(7133957-7134023)
chr5 (107-180)||(37405083-37405156)
chr5 (122-194)||(170583-170655)
chr5 (30-154)||(8098337-8098461)
chr5 (89-169)||(18333464-18333544)
chr5 (32-164)||(29909663-29909795)
chr5 (89-169)||(41666756-41666836)
[»] chr1 (30 HSPs)
chr1 (29-157)||(25145659-25145787)
chr1 (32-95)||(38733230-38733293)
chr1 (31-100)||(4112716-4112785)
chr1 (30-167)||(51460382-51460519)
chr1 (37-169)||(4112953-4113085)
chr1 (29-169)||(26176913-26177053)
chr1 (30-149)||(27413372-27413491)
chr1 (30-169)||(4098343-4098481)
chr1 (30-128)||(16162979-16163077)
chr1 (38-180)||(30369829-30369971)
chr1 (29-95)||(31496310-31496376)
chr1 (39-95)||(32783230-32783286)
chr1 (43-103)||(51460003-51460063)
chr1 (29-167)||(39348291-39348429)
chr1 (33-143)||(49868516-49868627)
chr1 (30-131)||(33156776-33156878)
chr1 (88-169)||(25145483-25145564)
chr1 (37-169)||(7307726-7307858)
chr1 (45-169)||(8870865-8870989)
chr1 (30-166)||(51589000-51589136)
chr1 (122-194)||(52907364-52907436)
chr1 (30-81)||(25713251-25713302)
chr1 (30-149)||(35772054-35772173)
chr1 (30-169)||(38668130-38668269)
chr1 (30-81)||(52961440-52961491)
chr1 (123-173)||(12376470-12376520)
chr1 (29-95)||(26173395-26173461)
chr1 (40-169)||(26346919-26347047)
chr1 (78-195)||(40316038-40316155)
chr1 (89-169)||(40079157-40079237)
[»] chr6 (31 HSPs)
chr6 (30-169)||(13353206-13353345)
chr6 (30-169)||(33796331-33796470)
chr6 (30-169)||(4868752-4868892)
chr6 (30-169)||(9705025-9705165)
chr6 (37-169)||(12330126-12330258)
chr6 (29-169)||(2736340-2736481)
chr6 (30-169)||(6542883-6543022)
chr6 (31-166)||(11085589-11085724)
chr6 (29-95)||(6237646-6237712)
chr6 (37-169)||(30849349-30849481)
chr6 (38-166)||(33494547-33494675)
chr6 (32-95)||(7638790-7638853)
chr6 (29-149)||(34345423-34345542)
chr6 (30-169)||(3680017-3680156)
chr6 (107-169)||(6400637-6400699)
chr6 (37-166)||(8001496-8001626)
chr6 (39-89)||(31961028-31961078)
chr6 (32-169)||(3713347-3713484)
chr6 (30-167)||(28648888-28649025)
chr6 (89-169)||(9705259-9705339)
chr6 (33-166)||(19712722-19712857)
chr6 (32-164)||(24554127-24554258)
chr6 (122-166)||(27653225-27653269)
chr6 (91-166)||(27656466-27656541)
chr6 (30-93)||(33631745-33631808)
chr6 (123-169)||(2737203-2737249)
chr6 (89-166)||(13740924-13741001)
chr6 (89-166)||(13746424-13746501)
chr6 (89-169)||(4868576-4868656)
chr6 (30-62)||(15082082-15082114)
chr6 (37-81)||(20660966-20661010)
[»] scaffold0519 (1 HSPs)
scaffold0519 (31-169)||(1921-2059)
[»] scaffold0092 (1 HSPs)
scaffold0092 (31-169)||(5660-5798)
[»] chr8 (35 HSPs)
chr8 (31-169)||(11232370-11232508)
chr8 (39-169)||(12688077-12688207)
chr8 (32-169)||(39052871-39053008)
chr8 (29-169)||(20301266-20301406)
chr8 (29-169)||(21087898-21088038)
chr8 (30-169)||(5932124-5932263)
chr8 (30-169)||(24532361-24532500)
chr8 (31-169)||(41790664-41790801)
chr8 (40-169)||(8084132-8084261)
chr8 (29-169)||(36917378-36917518)
chr8 (30-155)||(3157499-3157624)
chr8 (54-169)||(11232158-11232273)
chr8 (30-93)||(18004269-18004332)
chr8 (29-95)||(31197693-31197759)
chr8 (30-167)||(37001233-37001373)
chr8 (40-173)||(10614889-10615022)
chr8 (30-95)||(10615473-10615538)
chr8 (37-194)||(37868530-37868687)
chr8 (30-166)||(4828076-4828212)
chr8 (32-169)||(15042826-15042965)
chr8 (30-166)||(19256760-19256896)
chr8 (31-173)||(10615631-10615774)
chr8 (87-194)||(42049684-42049791)
chr8 (40-166)||(20094745-20094870)
chr8 (29-169)||(12317051-12317191)
chr8 (40-166)||(26208198-26208325)
chr8 (122-173)||(40014659-40014710)
chr8 (33-139)||(4873634-4873740)
chr8 (30-63)||(3157184-3157217)
chr8 (30-75)||(35682956-35683001)
chr8 (29-93)||(7669500-7669564)
chr8 (44-120)||(8860797-8860873)
chr8 (40-100)||(9397824-9397884)
chr8 (30-166)||(16050037-16050173)
chr8 (32-76)||(39052714-39052758)
[»] scaffold0692 (1 HSPs)
scaffold0692 (29-169)||(5693-5833)
[»] scaffold0047 (1 HSPs)
scaffold0047 (29-169)||(12652-12792)
[»] scaffold0048 (1 HSPs)
scaffold0048 (38-137)||(81879-81978)
[»] scaffold0459 (1 HSPs)
scaffold0459 (37-81)||(13190-13234)
[»] scaffold0366 (2 HSPs)
scaffold0366 (37-81)||(10831-10875)
scaffold0366 (37-81)||(14497-14541)
[»] scaffold0129 (1 HSPs)
scaffold0129 (30-169)||(14308-14447)
[»] scaffold0400 (1 HSPs)
scaffold0400 (30-155)||(3864-3989)
[»] scaffold0365 (1 HSPs)
scaffold0365 (30-155)||(4508-4633)
[»] scaffold0003 (1 HSPs)
scaffold0003 (38-102)||(102325-102389)
[»] scaffold0045 (1 HSPs)
scaffold0045 (31-95)||(41147-41211)


Alignment Details
Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 9908751 - 9908935
Alignment:
Q  10 aacactattgggcggtgactccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggt 109  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| || |||  |||||    
T  9908751 aacactattggacggtgaccccgataacggaaatctgatagcaggtggtccaatagatcttggagagactctgataccatcttagatatcgtgattaggt 9908850  T
Q  110 ctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9908851 ctaatacaaccacacagaaccgacttgtgatgtggggatttcccccacatataaacacatgtttggaccatattttgtccaatgt 9908935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 50543505 - 50543646
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaata--gatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaa 127  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||||| || |||| | || |||| |||||  ||||||    
T  50543505 ccgataacggaaacctgatagcaggtggtcaaatatggatcttggagaggctctgatatcatcttagaaatcgtggttgggcctaacacaactccacaaa 50543604  T
Q  128 accgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||| ||||||| ||| ||||| ||||||| |||| ||||||    
T  50543605 accggcttgtgaggtgaggattgcccccacttatacacacat 50543646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 22231248 - 22231382
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||||| ||| |||||||| |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  22231248 ccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaac 22231347  T
Q  130 cgacttgtgatgtggggatttcccccacatataaa 164  Q
    || ||||||| ||| ||||| ||||||| ||||||    
T  22231348 cggcttgtgaggtgaggattgcccccacttataaa 22231382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 40717380 - 40717517
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| |||||||||||| |||||||| ||||| ||| |||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  40717380 tccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40717479  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||||| ||| ||| ||||| ||||||| ||||||||    
T  40717480 ccgacttttgaggtgaggattgcccccacttataaaca 40717517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 7926464 - 7926308
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||||||||||| ||||| |||||||||||| |||| ||| |||||| || ||  ||| | || |||| ||| |  |||||||||| |||||    
T  7926464 ggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaacacagccccacaaaaccggcttgt 7926365  T
Q  138 gatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    | |||| ||| | ||||||| ||||||||||||||| | |||| |||||||| ||||    
T  7926364 gttgtgaggaatgcccccacttataaacacatgttcaggccatcttttgtccgatgt 7926308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 166
Target Start/End: Complemental strand, 6218346 - 6218212
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| |||||||||||||| ||||| |||||| |||||||||||| |||| ||| ||||||||| || |||| |  |||||| |||||  ||||||||||    
T  6218346 gatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccatcttagaaatcgtggttgtgtctaacacaactccacaaaaccg 6218247  T
Q  132 acttgtgatgtggggatttcccccacatataaaca 166  Q
     ||||||| |||  |||| ||||||| ||||||||    
T  6218246 tcttgtgaggtgaagattgcccccacttataaaca 6218212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 35788802 - 35788664
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    |||||||||||||||||||||||||| ||||  ||||||||| ||| |||| ||| ||||||||| || |||| | || |||| |||||  || ||||||    
T  35788802 gataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccataaaacc 35788703  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||||| ||| ||||| ||||||| |||||||||||    
T  35788702 ggcttgtgaggtgaggattgcccccacttataaacacat 35788664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 35819068 - 35819204
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||||| |||||| |||||||||| ||  ||||||| | || |||| | || |||| |||||  ||||||||    
T  35819068 ccgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcgtggttgggcctaacacaacctcacaaaac 35819167  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
     | ||||||| | | ||||| ||||||||||||||||    
T  35819168 tggcttgtgaggcgaggattgcccccacatataaaca 35819204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 34357970 - 34358109
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| || |||| ||||||||||||| |||| |||| ||||||||||||| || |||  |  | |||| |||||  ||||||||    
T  34357970 ccgatagcggaaacctgataacaagtggcccaatagatcttgtagaggctctgatatcatcttagaaatcgtgtttgagcctaacacaaccccacaaaac 34358069  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||| ||||||| ||||| ||||||  |||||||||||    
T  34358070 cggcttctgatgtgaggattgcccccatttataaacacat 34358109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 32002465 - 32002323
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| ||||||||||||||||| ||  ||||||||||||||||||  ||| ||| ||||||| | ||||||  | |||||||||||||  |||||||||    
T  32002465 cgatagcggaaacctgatagcagatga-ccaatagatcttggagaggttctgataccatcttaaaaattgtgtttgggtctaatacaacctcacaaaacc 32002367  T
Q  131 gacttgtgatgtggggatttcccccac-atataaacacatgttc 173  Q
    || |||| | |||  |||| |||||||  |||||||||||||||    
T  32002366 gatttgtaaggtgaagattgcccccactttataaacacatgttc 32002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 12869203 - 12869337
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| |||| | ||| || ||||||||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  12869203 ccgataacggaaacctgataacaggtgggccaaaaaatcgtgaagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaac 12869302  T
Q  130 cgacttgtgatgtggggatttcccccacatataaa 164  Q
    || ||| ||| ||| |||||  |||||| ||||||    
T  12869303 cgtcttatgaggtgaggattgtccccacttataaa 12869337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 11036688 - 11036825
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| ||||||||| |||| |||||| ||||| |||||| ||| | |||| ||| ||||||| | ||||||| |||| |||| |||||  |||| || ||    
T  11036688 gatagcggaaacctaatagtaggtggcccaatggatcttagagtggctctgataccatcttaaaaattgtggttaggcctaacacaaccccacacaatcg 11036787  T
Q  132 acttgtgatgtggggatttcccccacatataaacacat 169  Q
     ||||||| ||| ||||| ||||||| |||||||||||    
T  11036788 gcttgtgaggtgaggattgcccccacttataaacacat 11036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 13555424 - 13555490
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||| ||| | ||| |||||||    
T  13555424 cggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatatcagaaattgtgg 13555490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 28245701 - 28245766
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||| |||| ||| ||| |||||    
T  28245701 ccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattaga 28245766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 9685542 - 9685406
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||  || |||| |||| ||| ||| ||||| || |||| | || |||| |||||  ||||||||    
T  9685542 ccgataacggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaac 9685443  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |||||||||| ||| |||||  |||||| ||||||||    
T  9685442 cgacttgtgaggtgaggattggccccacttataaaca 9685406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 30530103 - 30530175
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||| |||||| |||||||||||||| | ||| |||||||||||| |||| ||| ||||||||| |||||||    
T  30530103 cgatagcggaaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaattgtgg 30530175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 35796917 - 35797053
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||| ||||||| ||||| | |||| |||| ||| ||||||||| || || | | ||  ||| |||||  ||||||||    
T  35796917 ccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatggtagttgggcttaacacaaccccacaaaac 35797016  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
     |  |||||| ||| ||||| ||||||| ||||||||    
T  35797017 tggtttgtgaggtgaggattgcccccacttataaaca 35797053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 53814869 - 53815005
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||| ||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||||| || |||| | ||  ||| |||||  ||||||||    
T  53814869 ccgataacagaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaac 53814968  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |||||||||| ||| ||||| ||||||| ||||||||    
T  53814969 cgacttgtgaggtgaggattgcccccacttataaaca 53815005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 22822495 - 22822356
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||| ||||||||||||||||||| | ||||    ||||| || || |||| |||  ||||||||  |||||| | |  |||||||||| ||||||||    
T  22822495 ccgatagcggaaacctgatagcaggtagcccaacgagtcttgtaggaggctctgatacaatcttagaatttgtggttggacctaatacaaccgcacaaaa 22822396  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacaca 168  Q
    ||| ||||||  ||| ||||||||||||| ||||||||||    
T  22822395 ccggcttgtgtggtgaggatttcccccacttataaacaca 22822356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 4905676 - 4905741
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||||| | ||||||| ||||||||||| ||||| || ||||||||| |||| |||||||||||||    
T  4905676 ccgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttaga 4905741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 27634255 - 27634307
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||| | |||||||||||||| |||||||||| |||||||||||| ||||    
T  27634255 tccgatagcagaaacctgatagcaagtggtccaatggatcttggagaggctct 27634307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 31945067 - 31944996
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgt 101  Q
    ||||||| | ||||||| |||||| |||||| ||||||||||||||||||||| || |||| ||||| |||||    
T  31945067 tccgatagcagaaacctaatagcatgtggtc-aatagatcttggagagactctgatgtcattttagaaattgt 31944996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 400597 - 400644
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||||||||    
T  400597 cacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat 400644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 12005486 - 12005573
Alignment:
Q  107 ggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    ||||||| |||||  |||||||||| ||||||| ||| ||||| ||||||| ||| |||| ||||||   ||||||||||||| ||||    
T  12005486 ggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttattaacaaatgttcatgccatattttgtccgatgt 12005573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 21646272 - 21646347
Alignment:
Q  97 attgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgtt 172  Q
    ||||||| ||||||||| |||||| |||||||| | ||||| | ||| ||||| ||||||  ||||||||||||||    
T  21646272 attgtggttaggtctaacacaacatcacaaaactggcttgtaaggtgaggattgcccccatttataaacacatgtt 21646347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 22445579 - 22445489
Alignment:
Q  47 atagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||| ||||||  |||| ||||||| |||| |||| ||| |||||||||  |||||| | ||||||| |||||  ||||||||||||||||    
T  22445579 atagtaggtggctcaatggatcttgaagaggctctgataccatcttagaatttgtggttgggtctaacacaaccccacaaaaccgacttgt 22445489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 26549566 - 26549504
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatctta 93  Q
    |||||| ||||||||||||||||||  |||| ||||||| || |||||||| |||||||||||    
T  26549566 gataacagaaacctgatagcaggtgacccaacagatcttagaggagactctgatatcatctta 26549504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 35609522 - 35609572
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgtt 172  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||||||| ||||    
T  35609522 cacaaaaccgacttgtgaggtgaggattgcccccacttataaacacttgtt 35609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 36685872 - 36685954
Alignment:
Q  87 catcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||||| || |||| | |||||||||||||  |||||||| ||||||||| ||| ||||  ||||||  |||||||||||    
T  36685872 catcttagaaatcgtggttgggtctaatacaaccccacaaaactgacttgtgaggtgaggataacccccatttataaacacat 36685954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 40716560 - 40716626
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttaga 95  Q
    |||||||||||||||||||||||||||| ||||  |||| |||| ||| |||| ||| |||||||||    
T  40716560 ccgataacggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttaga 40716626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 6666592 - 6666725
Alignment:
Q  47 atagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtgggg 146  Q
    ||||||||||| |||| |||||||| ||||  ||||||| ||||||||| || |||| | || |||| ||||   ||||||||||  |||||| ||  ||    
T  6666592 atagcaggtggcccaacagatcttgtagaggttctaataccatcttagaaatcgtggttgggcctaaaacaatcccacaaaaccggtttgtgaggtaagg 6666691  T
Q  147 atttcccccacatataaacacatgttcggaccat 180  Q
    ||| ||||||| |  |||||| ||||| ||||||    
T  6666692 attgcccccacttgaaaacacttgttcagaccat 6666725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 21646451 - 21646504
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    |||| ||||||||||||  |||||  |||||||||||||||||||| |||||||    
T  21646451 aaacatgatagcaggtgacccaatgaatcttggagagactctaataccatctta 21646504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 28246107 - 28246164
Alignment:
Q  112 aatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  28246107 aatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 28246164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 43743123 - 43743050
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaa 113  Q
    |||||||||||||||||||| ||| |||||| ||||| |||| |||  |||||| | || |||| |||||||||    
T  43743123 aaacctgatagcaggtggtcaaatggatctttgagaggctctgatactatcttataaatcgtggttaggtctaa 43743050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 22845446 - 22845526
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  22845446 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat 22845526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 25324209 - 25324253
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggag 74  Q
    |||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  25324209 ccgatagcggaaacttgatagcaggtggcccaatggatcttggag 25324253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 49190120 - 49190184
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||| ||||||||| | ||||||||||||||  ||||||||| || |||| ||| |||||||||    
T  49190120 cgatagcggaaacctaaaagcaggtggtccaacggatcttggataggctctgataccatcttaga 49190184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 15124723 - 15124861
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| || |||| | ||||||| |||||  ||||||||    
T  15124723 ccgataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaac 15124822  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacaca 168  Q
    ||| |||||| |||  |||| ||| ||| ||||||||||    
T  15124823 cgaattgtgaagtgaagattgccctcacttataaacaca 15124861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 2029914 - 2029774
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| ||||||||| ||||||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  2029914 tccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaaacaaccccacaaaa 2029815  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||||||| ||| ||||| || |||| |||||||||||    
T  2029814 ccggcttgtgaggtgaggattgcctccacttataaacacat 2029774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 16419410 - 16419302
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || ||||||||||  |||||||||    
T  16419410 cgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaatacaaccccacaaaacc 16419311  T
Q  131 gacttgtga 139  Q
    | |||||||    
T  16419310 ggcttgtga 16419302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 17719536 - 17719405
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||||||||||| | ||| ||||||||||||||| | ||| ||||||||| ||||||| | || | || |||||   ||||||||| |||||    
T  17719536 ggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattgtggttgggccgaacacaacccgacaaaaccggcttgt 17719437  T
Q  138 gatgtggggatttcccccacatataaacacat 169  Q
    || ||| ||||| ||||||| |||||||||||    
T  17719436 gaggtgaggattgcccccacttataaacacat 17719405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 40379392 - 40379522
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||||||||||| | ||| ||||||||| || |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||| |||||    
T  40379392 ggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgt 40379491  T
Q  138 gatgtggggatttcccccacatataaacaca 168  Q
    || ||| ||||| ||||||| ||||||||||    
T  40379492 gaggtgaggattgcccccacttataaacaca 40379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 14466350 - 14466489
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| || |||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  14466350 ccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaac 14466449  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||| | ||| ||||| | ||||| |||||||||||    
T  14466450 cggcttgtaaggtgaggattgctcccacttataaacacat 14466489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 36352099 - 36352238
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| || || ||||||| ||||||||||||| ||||||| | ||||||| |    |||| |||||  ||||||||    
T  36352099 ccgataacggaaacctgataacaggtggcccgatggatcttgaagagactctaataccatcttaaaaattgtggttgaacctaacacaaccccacaaaac 36352198  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||| ||| |||  |||| ||||||| |||||||||||    
T  36352199 cggcttttgaggtgatgattgcccccacttataaacacat 36352238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 197
Target Start/End: Original strand, 33606231 - 33606397
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| |||||||||||||||| |||  ||||||||||||| ||||||| | ||||||||||||| || |||| |  | |||| | |||  |||||||| |    
T  33606231 gatagcggaaacctgatagcaagtgacccaatagatcttgaagagactttgatatcatcttagaaatcgtggttgtgcctaacataacgccacaaaactg 33606330  T
Q  132 acttgtgatgtggggatttcccccacatataaacaca-tgttcggaccatattttgtccaatgtaag 197  Q
     ||||||| ||| ||||| ||||||| |||||||||| | |||||||||  | || |||||||||||    
T  33606331 gcttgtgaggtgaggattacccccacttataaacacatttttcggaccacctcttatccaatgtaag 33606397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 5711614 - 5711754
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||| |||| |||  |||||||| || |||| | || |||| |||||  |||||||    
T  5711614 ccgataacggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatactatcttagaaatggtggttgggcctaacacaaccccacaaaa 5711713  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| | | |||  |||| ||||||| |||||||||||    
T  5711714 ccggcttttaaggtgatgattgcccccacttataaacacat 5711754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 93294 - 93394
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||| |||| ||| ||||||| | || |||| | || |||| |||||  ||||||||    
T  93294 ccgataacggaaagctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggttgggcctaacacaaccccacaaaac 93393  T
Q  130 c 130  Q
    |    
T  93394 c 93394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 44404109 - 44404153
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  44404109 cggaaacctgatagcaggtggtccaatggatcttggagagactct 44404153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 2324384 - 2324248
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||| | || |||| | || |||| |||||  ||||||||    
T  2324384 ccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaac 2324285  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| ||||| ||||||| ||||||||    
T  2324284 cggcttgtgaggtgaggattgcccccacttataaaca 2324248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 18607184 - 18607235
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||| ||||    
T  18607184 ccgataacggaaacctgatagcatgtggcccaatggatcttggagaggctct 18607235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 15988265 - 15988199
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtc 188  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||| |||||| | | ||||||||||||    
T  15988265 cacaaaaccggcttgtgaggtgaggatttcccccacttataaaaacatgtacaggccatattttgtc 15988199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 93567 - 93667
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||||||||||||||||| |||||  ||||| ||||||||| ||  ||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  93567 ccgataacggaaacctgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaac 93666  T
Q  130 c 130  Q
    |    
T  93667 c 93667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 5509223 - 5509087
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||||| ||  ||| | || |||| |||||  ||||||||    
T  5509223 ccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcatggttgggcctaacacaaccccacaaaac 5509124  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |  ||||||| ||| ||||| ||||||| ||||||||    
T  5509123 cagcttgtgaggtgaggattacccccacttataaaca 5509087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 34893570 - 34893506
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    ||||||| || ||||||||||| |||||| ||||| |||||||||||| |||| ||| |||||||    
T  34893570 tccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 94052 - 94098
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacaca 168  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||||||||    
T  94052 cacaaaaccgacttgtgaggtgaggattgcccccacttataaacaca 94098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 16533614 - 16533552
Alignment:
Q  107 ggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  16533614 ggtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacat 16533552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 24395997 - 24395883
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtga 139  Q
    |||| ||| ||||||||||||||| ||||||| |||| |||| ||| | ||||||| || |||| | || |||| |||||  ||||||| ||| ||||||    
T  24395997 aaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcgtggtttggcctaacacaaccccacaaaatcgatttgtga 24395898  T
Q  140 tgtggggatttcccc 154  Q
     ||| ||||| ||||    
T  24395897 ggtgaggattgcccc 24395883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 37812443 - 37812489
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagag 76  Q
    |||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  37812443 ccgatagcagaaacctgatagcaggtggcccaatggatcttggagag 37812489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 40149175 - 40149249
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||||| | |||| |||||||||||||  ||||| ||||||| |||| |||| ||| ||||||||| |||||||    
T  40149175 tccgatagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgataccatcttagaaattgtgg 40149249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 13210663 - 13210534
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||| ||||||||| |||| ||||| |||||||||| || |||| ||| |||||||||  |||||| | || |||| || ||  |||||||||||| ||    
T  13210663 ggaaatctgatagcatgtggcccaatggatcttggaggagtctctgataccatcttagaatttgtggttgggcctaacacgaccccacaaaaccgacctg 13210564  T
Q  137 tgatgtggggatttcccccacatataaaca 166  Q
    ||| ||| ||||| ||| | | ||||||||    
T  13210563 tgaggtgaggattgccctctcttataaaca 13210534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 17525274 - 17525338
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||||| |||| |||||||||||||||| ||||| ||| ||| |||| |||| |||||||||||||    
T  17525274 ccgatagcggatacctgatagcaggtggcccaatggat-ttgaagaggctcttatatcatcttaga 17525338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 30701208 - 30701253
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaata 85  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||||    
T  30701208 aaacctgatagtaggtggcccaatggatcttgaagagactctaata 30701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 13764492 - 13764540
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagact 79  Q
    ||||||| |||||||| ||||||||||||||||  ||||| ||||||||    
T  13764492 cgataacagaaacctggtagcaggtggtccaatgaatcttagagagact 13764540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 16419587 - 16419507
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  16419587 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 16419507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 26239857 - 26239995
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    |||||||||||||||||||||||||| ||||  |||||||||| || |||| ||| ||||||||| ||||||| | ||||||| |||||  ||||| |||    
T  26239857 gataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaaccccacaatacc 26239956  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||||| ||| ||||| ||||||| |||||||||||    
T  26239957 gacttgtgaggtgaggattgcccccacttataaacacat 26239995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 25620273 - 25620141
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||| ||||    
T  25620273 cggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttg 25620174  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| ||||| ||||||| |||||||||||    
T  25620173 tgaggtgaggattgcccccacttataaacacat 25620141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 36277165 - 36277305
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| |||||||||||||| |||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  36277165 tccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcgtggttgggactaacacaaccccacaaaa 36277264  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
     |||||||||| ||| ||||| ||||||| |||||||||||    
T  36277265 tcgacttgtgaggtgaggattgcccccacttataaacacat 36277305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 1596737 - 1596599
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| || |||| ||||| |||||||||||| |||| ||| ||||||||| ||||||| |||| |||| |||||  ||| ||||    
T  1596737 ccgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaattgtggttaggcctaacacaaccccac-aaac 1596639  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||| | ||| ||||| ||||||| ||| |||||||    
T  1596638 cggcttgtaaggtgaggattgcccccacttattaacacat 1596599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 21861438 - 21861299
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| ||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| ||||   ||||||||    
T  21861438 ccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaatcccacaaaac 21861339  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||| | ||| ||||| ||| ||| |||||||||||    
T  21861338 cggcttgtaaggtgaggattgccctcacttataaacacat 21861299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 28080806 - 28080699
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| ||||||| ||||||||||||| ||||||||||||| |||| |||| ||||||||||||| || |||| | | ||||| | |||  ||||||||||    
T  28080806 gatagcggaaacttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgtggttggatctaacataaccccacaaaaccg 28080707  T
Q  132 acttgtga 139  Q
    ||||||||    
T  28080706 acttgtga 28080699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 29469749 - 29469610
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||| ||||||| ||||||| ||||| |||||||||||| |||| ||| ||| ||||| || |||| | || |||| |||||  ||||||||    
T  29469749 ccgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaac 29469650  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||| | ||| ||||| ||||||| |||||||||||    
T  29469649 cggcttgtaaggtgaggattgcccccacttataaacacat 29469610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 31485609 - 31485738
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtga 139  Q
    ||||||||||| |||||| ||||| ||||||| || | |||| ||| ||||||||| ||||||| |||| |||| |||||  |||||||||| ||||| |    
T  31485609 aaacctgatagtaggtggcccaatggatcttgtagcggctcttataccatcttagaaattgtggttaggcctaacacaacttcacaaaaccggcttgtca 31485708  T
Q  140 tgtggggatttcccccacatataaacacat 169  Q
     ||| ||||| ||||||| |||||| ||||    
T  31485709 ggtgaggattgcccccacttataaaaacat 31485738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 22574746 - 22574672
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||||| | ||||||||||||||||||| ||||| ||||||||||||||||| ||| |||| |||| |||||||    
T  22574746 tccgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccatcatagaaattgtgg 22574672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 33996261 - 33996390
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||||||||||||||| ||||| |||   |||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||||||||    
T  33996261 cggaaacctgatagcaggtggcccaatggat---ggagaggctctgataccatcttagaaatcgtggttgggcctaacacaactccacaaaaccgacttg 33996357  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| |||  |||| ||||||| |||||| ||||    
T  33996358 tgaggtgaagattgcccccacttataaatacat 33996390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 10903230 - 10903093
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| ||||||| ||||| ||||||| ||||| |||||||||||  |||| ||||||| ||||  || |||| | || |||| |||||  |||||||    
T  10903230 tccgatagcggaaacatgataacaggtggcccaatggatcttggagaagctctgatatcattttagtaatcgtggttggggctaacacaactccacaaaa 10903131  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||| ||||||| ||| ||||| |||| || ||||||||    
T  10903130 ccggcttgtgaggtgaggattacccctacttataaaca 10903093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 44874526 - 44874591
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    |||||||||||||||||||  ||||| ||||||| ||||||||| ||| |||||||||||||||||    
T  44874526 ggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatcttagacattgtgg 44874591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 34027537 - 34027401
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||| |||||||||||| ||||||| ||||   ||| || |||| |||||||| ||| ||||| || |||| | || |||| |||||  ||||||||    
T  34027537 ccgataatggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcctaacacaaccccacaaaac 34027438  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| ||||| ||||||| ||||||||    
T  34027437 cggcttgtgaggtgaggattgcccccacttataaaca 34027401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 48661502 - 48661634
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    |||||||||||||||||||||  |||| | ||||  |||| |||| ||||||| ||||| || |||| | ||||||| ||||   |||||||||| ||||    
T  48661502 cggaaacctgatagcaggtggctcaatggttcttaaagaggctctgatatcatattagaaatcgtggttgggtctaacacaatctcacaaaaccggcttg 48661601  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| ||||| ||||||| |||||| ||||    
T  48661602 tgaggtgaggattgcccccacctataaatacat 48661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 31892294 - 31892231
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||| ||  |||||||||    
T  31892294 gataacggaaacctgatagcaggtggcccaataggtcttggagaggctctgattccatcttaga 31892231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 9689047 - 9689113
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||| ||| | ||| |||||||    
T  9689047 cggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatatcagaaattgtgg 9689113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 4886464 - 4886347
Alignment:
Q  39 gaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtg 138  Q
    ||||| ||||||||||||| ||||| |||||||||||||| || ||| ||||||||| || |||| | || |||| |||||  | | |||||| ||||||    
T  4886464 gaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaatcgtggttgggcctaacacaacctcgccaaaccggcttgtg 4886365  T
Q  139 atgtggggatttccccca 156  Q
    | ||| ||||| ||||||    
T  4886364 aggtgaggattgccccca 4886347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 33834325 - 33834237
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  33834325 aaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 4507074 - 4506937
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    ||||||||||| |||||||||||||  ||||| ||||||| | || |||| |||  |||||||| || || | | ||||||| |||||  || |||||||    
T  4507074 gataacggaaatctgatagcaggtgacccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaaccccataaaaccg 4506975  T
Q  132 acttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||||||| ||| ||||| |  | || |||||||||||    
T  4506974 acttgtgaggtgaggattgctgcaacgtataaacacat 4506937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 3038059 - 3038163
Alignment:
Q  65 gatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaa 164  Q
    ||||||| |||| |||| |||| |||||||| ||  ||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| ||||||    
T  3038059 gatcttgaagaggctctgatattatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaa 3038158  T
Q  165 cacat 169  Q
    |||||    
T  3038159 cacat 3038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 26562015 - 26562149
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||||||||||||||||| ||||||| ||||   ||| || ||||||||| ||| ||| ||||| || |||| |  | |||| | |||  ||||||||||    
T  26562015 gataacggaaacctgataacaggtggcccaaagaatcgtgaagagactctgataccatattagaaatggtggttgagcctaacataaccccacaaaaccg 26562114  T
Q  132 acttgtgatgtggggatttcccccacatataaaca 166  Q
     ||||||| |||  |||| ||||||| ||||||||    
T  26562115 gcttgtgaggtgaagattgcccccacttataaaca 26562149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 32279011 - 32279069
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatca 88  Q
    |||||| || |||||||||||||||||| |||||| || |||||||| |||| ||||||    
T  32279011 ccgatagcgaaaacctgatagcaggtggcccaataaattttggagaggctctgatatca 32279069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 2544479 - 2544523
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||||||    
T  2544479 cacaaaaccgacttgtgaggtgaggattgcccccacttataaaca 2544523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 5871988 - 5872055
Alignment:
Q  123 acaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaa 191  Q
    |||||| || ||||||| ||||||||| |||| || || |||||||| ||| |||||||||||||||||    
T  5871988 acaaaatcggcttgtgaagtggggattgcccc-acttaaaaacacatcttcagaccatattttgtccaa 5872055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 21213025 - 21213124
Alignment:
Q  73 agagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgtt 172  Q
    ||||||||| ||| ||||||||| ||||||  |||  |||| |||||  ||||||||| |||||||| |||  |||| | ||||| ||||||||||||||    
T  21213025 agagactctgataccatcttagaaattgtgaatagc-ctaacacaactccacaaaaccaacttgtgaggtgatgattactcccacttataaacacatgtt 21213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 23839109 - 23839153
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |||||||||| ||||||| ||| ||||||||||||| ||||||||    
T  23839109 cacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 23839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 54568029 - 54567897
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    |||||||||||||||||||||  |||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||| ||||    
T  54568029 cggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttg 54567930  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| ||||||||||||| |||||||||||    
T  54567929 tgaggtgaggatttcccccacttataaacacat 54567897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 4155468 - 4155331
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  4155468 ccgatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaac 4155369  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacac 167  Q
    || ||| ||| ||| ||||| ||||||| |||||||||    
T  4155368 cggcttttgaggtgaggattgcccccacttataaacac 4155331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 45828162 - 45828019
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| |||||||||| ||||||||||  |||| |||||||||||| |||| ||| ||||||||| |||||||   || |||| |||||  |||||||||    
T  45828162 cgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagggcctaacacaacctcacaaaacc 45828063  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacatgttcg 174  Q
    | ||||||| ||| ||||| |||| || |||||||| |||||||    
T  45828062 ggcttgtgaggtgaggattgccccaacttataaacatatgttcg 45828019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 49629751 - 49629610
Alignment:
Q  28 ctccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaa 127  Q
    |||||||| | ||||||||||||||||||||||||| ||||||| |||| |||||||| ||| ||| | || ||   | ||||||| |||||  ||||||    
T  49629751 ctccgatagcagaaacctgatagcaggtggtccaatggatcttgaagaggctctaataccattttaaaaatggtaattgggtctaacacaaccccacaaa 49629652  T
Q  128 accgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||  |||||| ||||||||| || |||| |||||||||||    
T  49629651 accggtttgtgaggtggggattgccgccacttataaacacat 49629610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 1723016 - 1723152
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  1723016 ccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaac 1723115  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| ||||| ||||||| ||||||||    
T  1723116 cggcttgtgaggtgaggattgcccccacttataaaca 1723152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 13574861 - 13575025
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||| ||||||||||||||||||||| ||||| ||||||    ||| || | ||| ||| ||||| ||||||| | || |||| |||||  ||||||||    
T  13574861 cgatagcggaaacctgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttgggcctaacacaaccccacaaaac 13574960  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
     | ||||||| ||| ||||||||||||| ||||||||||||| |   ||||||||||||| ||||    
T  13574961 tggcttgtgaggtgaggatttcccccacttataaacacatgtccatgccatattttgtccgatgt 13575025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 16239735 - 16239596
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||||||||||||||||||||||| | ||  ||||||||| ||| |||| ||| ||||||||| || |||| | || |||| ||||   ||||||||    
T  16239735 cgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaac 16239636  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||||| ||| || || ||||||| |||||||||||    
T  16239635 cggcttgtgaggtgaggtttgcccccacttataaacacat 16239596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 35038368 - 35038507
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| |||||||||||| |||||||| ||||| |||||||||||| | || ||| |||||||||  | |||| | || |||| |||||  ||||||||    
T  35038368 ccgatagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaac 35038467  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |  ||||| | ||| ||||| ||||||| |||||||||||    
T  35038468 cagcttgtcaggtgaggattgcccccacttataaacacat 35038507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 20327789 - 20327925
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||||| ||| || ||||| | || ||| ||| ||||| ||  ||| | || |||| |||||  ||||||||    
T  20327789 ccgatagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccatattagaaatcatggttgggcctaacacaaccccacaaaac 20327888  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| ||||| ||||||| ||||||||    
T  20327889 cggcttgtgaggtgaggattgcccccacttataaaca 20327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 169
Target Start/End: Complemental strand, 54368637 - 54368521
Alignment:
Q  53 ggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcc 152  Q
    ||||| ||||| ||||||| |||| |||| ||| ||||||||| || |||| | ||||||| |||||  || ||||||| ||||||| ||| ||||| ||    
T  54368637 ggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcc 54368538  T
Q  153 cccacatataaacacat 169  Q
    ||||| |||||||||||    
T  54368537 cccacttataaacacat 54368521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 11589926 - 11589793
Alignment:
Q  33 ataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccga 132  Q
    ||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||||| || |||| | || |||| |||||  ||||||||||     
T  11589926 ataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaaccgg 11589827  T
Q  133 cttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||||| ||| ||||| ||||||| ||||||||    
T  11589826 cttgtgaggtgaggattgcccccacttataaaca 11589793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 34992743 - 34992687
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    ||||||||||||||||||||| ||||| || |||||||||||||| ||| |||||||    
T  34992743 cggaaacctgatagcaggtggcccaatggaccttggagagactctgataccatctta 34992687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 50052571 - 50052643
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttccccc-acatataaacacatgttcggaccatattttgtccaatg 193  Q
    |||||||||| ||||||| ||| ||||| ||||| || |||||||||||| |||| |||||||||||||||||    
T  50052571 cacaaaaccggcttgtgaagtgaggattgccccccacttataaacacatggtcgggccatattttgtccaatg 50052643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 16926901 - 16927028
Alignment:
Q  42 acctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatg 141  Q
    |||||||| ||||||  ||||| ||||||| ||||||||| ||| ||||||||| || |||| |  |  ||| |||||  |||||||||| |||||||      
T  16926901 acctgataacaggtgacccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaacacaaccccacaaaaccggcttgtgaga 16927000  T
Q  142 tggggatttcccccacatataaacacat 169  Q
    || ||||| ||||||| |||||||||||    
T  16927001 tgaggattacccccacttataaacacat 16927028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 12930069 - 12930207
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    |||||| ||||||||||||||||||| ||||  |||| |||| ||| || | ||| ||||||||| || |||| | || |||| |||||  |||||||||    
T  12930069 gataacagaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttagaaatggtggttgggcctaacacaaccccacaaaacc 12930168  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||||| ||| | |||  |||||||||| |||||||    
T  12930169 ggcttgtgaagtgagaattgtccccacatatgaacacat 12930207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 20303333 - 20303434
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||||||||||| ||||| ||| || ||||| |||| ||| ||| ||||| ||||||| | |  |||| |||||  |||||||||| |||||    
T  20303333 ggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaattgtggttggacctaacacaaccccacaaaaccggcttgt 20303432  T
Q  138 ga 139  Q
    ||    
T  20303433 ga 20303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 35038193 - 35038273
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | || |||| |||||  |||||||||| ||||||| ||| ||||||||||||| |||||||||||    
T  35038193 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat 35038273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 45828298 - 45828226
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    |||||||||  ||||||| |||| |||| ||||||| ||||||||||||||| | |||| |||||||| ||||    
T  45828298 cacaaaacctgcttgtgaggtggagattgcccccacttataaacacatgttcaggccatcttttgtccgatgt 45828226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 11659620 - 11659695
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtgg 103  Q
    ||||||| || |||||||||||||||| ||||||  ||||||||| ||| ||||||||  ||||||||||| ||||    
T  11659620 tccgatagcgaaaacctgatagcaggttgtccaacggatcttggaggaggctctaatacgatcttagacatcgtgg 11659695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 50083113 - 50083160
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||||||||    
T  50083113 cacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat 50083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 33640187 - 33640073
Alignment:
Q  33 ataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    ||||||||||  ||||| ||||||||||||  ||| ||||| ||| |||| ||||||||||||| ||||||  | || |||| ||||   ||||||||||    
T  33640187 ataacggaaatatgataacaggtggtccaacggattttggaggaggctctgatatcatcttagaaattgtgattgggcctaacacaatcccacaaaaccg 33640088  T
Q  132 acttgtgatgtgggg 146  Q
     ||||||| ||||||    
T  33640087 gcttgtgaggtgggg 33640073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 34610646 - 34610580
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttccccc 155  Q
    ||||||| ||||||| | ||||||| |||||  |||||||||||||||||| ||| ||||| |||||    
T  34610646 tcttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccccc 34610580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 45138819 - 45138881
Alignment:
Q  107 ggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||| |||||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  45138819 ggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 45138881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 46139406 - 46139344
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctt 92  Q
    |||||| | ||||||||||||||||||  ||||| ||||||||||||  ||||||| ||||||    
T  46139406 ccgatagcagaaacctgatagcaggtgacccaatggatcttggagaggatctaataccatctt 46139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 27670332 - 27670365
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaa 62  Q
    ||||||||||||||||||||| ||||||||||||    
T  27670332 tccgataacggaaacctgataacaggtggtccaa 27670365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 2806126 - 2806182
Alignment:
Q  48 tagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtgg 103  Q
    |||||||||| |||||| |||||| || | ||||||||||||||||||| |||||||    
T  2806126 tagcaggtggcccaataaatcttgcaggaaactctaatatcatcttagaaattgtgg 2806182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 24866184 - 24866136
Alignment:
Q  33 ataacggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||||||||||||||||||||| |||||  |||||| |||| ||||    
T  24866184 ataacggaaacctgatagcaggtggcccaatgaatcttgaagaggctct 24866136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 39269219 - 39269159
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcat 89  Q
    |||||||||||  |||||||||||||||| ||||| |||| ||||||| | || |||||||    
T  39269219 tccgataacggccacctgatagcaggtggcccaatggatcatggagaggccctgatatcat 39269159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 41666932 - 41667072
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||||||||||||| ||||  ||||||||| ||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  41666932 ccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 41667031  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||||||| ||| ||||| ||||||| |||||||||||    
T  41667032 ccggcttgtgaggtgaggattgcccccacttataaacacat 41667072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 25258240 - 25258377
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||  |||| ||| ||||||||| || |||| |  || ||| |||||  |||||||    
T  25258240 tccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaa 25258339  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||||||||| ||| ||||| |||||||  |||||||    
T  25258340 ccgacttgtgaggtgaggattgcccccactgataaaca 25258377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 25322030 - 25322167
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||  |||| ||| ||||||||| || |||| |  || ||| |||||  |||||||    
T  25322030 tccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaa 25322129  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||||||||| ||| ||||| |||||||  |||||||    
T  25322130 ccgacttgtgaggtgaggattgcccccactgataaaca 25322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 24346676 - 24346816
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||| |||| ||| ||||||| | || |||| | ||||||| |||||  |||||||    
T  24346676 ccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttgggtctaacacaaccccacaaaa 24346775  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||||||| ||| | ||| ||||||| |||||| ||||    
T  24346776 ccggcttgtgaggtgagtattacccccacttataaatacat 24346816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 32908892 - 32908997
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| | ||||||||||||||| ||| ||||| ||||||| |||| |||||||||||||||||| ||||||| |  |||||| |||||  ||||||||    
T  32908892 ccgatagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatcttagaaattgtggttgagtctaacacaaccccacaaaac 32908991  T
Q  130 cgactt 135  Q
    ||||||    
T  32908992 cgactt 32908997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 9368732 - 9368600
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||||||||||||||| ||||| ||||||| |||| |||| ||| || |||||| ||| ||| | || |||| |||||  |||||||||| ||||    
T  9368732 cggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaccttagaaattatggttgggcctaacacaaccccacaaaaccggcttg 9368633  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| ||||| || |||| |||||||||||    
T  9368632 tgaggtgaggattgcctccacttataaacacat 9368600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 15480459 - 15480327
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||||||||||||||| ||||| ||||||| |||| |||| ||| ||||||||| || |||| | || |||| | |||  |||||||||  ||||    
T  15480459 cggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttg 15480360  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| ||||| ||||||| |||||||||||    
T  15480359 tgaggtgaggattgcccccacttataaacacat 15480327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 24270045 - 24270184
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||| |||| ||| ||||||| | || |||| | ||||||| |||||  |||||||    
T  24270045 ccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtgg-ttggtctaacacaaccccacaaaa 24270143  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||||||| ||| | ||| ||||||| |||||| ||||    
T  24270144 ccggcttgtgaggtgagtattacccccacttataaatacat 24270184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 2063683 - 2063812
Alignment:
Q  39 gaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtg 138  Q
    ||||||||||| || ||| |||||| ||||||| |||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||||||||||    
T  2063683 gaaacctgataacatgtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgtg 2063782  T
Q  139 atgtggggatttcccccacatataaacacat 169  Q
    | ||| ||||| ||||||| |||||||||||    
T  2063783 a-gtgaggattgcccccacttataaacacat 2063812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 24528667 - 24528545
Alignment:
Q  47 atagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtgggg 146  Q
    ||||||||||||||||| |||| ||||||| |||| ||| ||||||||| ||  ||| | || |||| |||||  |||||||||| ||||||| ||| ||    
T  24528667 atagcaggtggtccaatggatcatggagaggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgagg 24528568  T
Q  147 atttcccccacatataaacacat 169  Q
    ||| ||||||| |||||||||||    
T  24528567 attgcccccacttataaacacat 24528545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 24531742 - 24531604
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||||| |||| |||||||||||||| ||||| |||| | ||||| |||| ||| ||||||||| || |||| | ||  ||| |||||  ||||||| |    
T  24531742 cgataacagaaaactgatagcaggtggcccaatggatcatagagaggctctgataccatcttagaaatcgtggttgggcataacacaaccccacaaaatc 24531643  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||||| ||| ||||| ||||||| |||||||||||    
T  24531642 ggcttgtgaggtgaggattgcccccacttataaacacat 24531604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 95448 - 95506
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| ||| |||||||||    
T  95448 cggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaga 95506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 43117792 - 43117726
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| || |||| |||  ||||||||    
T  43117792 tccgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatcttaga 43117726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 18333639 - 18333779
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| || |||||||||||||||||| || || ||||||| |||| |||| ||| |||||||||  | |||| | || |||| |||||  ||||||||    
T  18333639 ccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcgtggttgggcctaacacaaccccacaaaac 18333738  T
Q  130 cgacttgtgatgtggggatt-tcccccacatataaacacat 169  Q
    || ||||||| |||  ||||  ||||||| |||||||||||    
T  18333739 cggcttgtgaggtgacgattaccccccacttataaacacat 18333779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 60172 - 60088
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttc 173  Q
    ||||||| ||||||  | ||||||| | |||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||||||    
T  60172 tcttagaaattgtgattgggtctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatgttc 60088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 21209861 - 21209997
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||||||| ||| ||||| || |||| | ||  ||| |||||  ||||||||    
T  21209861 ccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcttaacacaaccccacaaaac 21209960  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| | |||  |||||| ||||||||    
T  21209961 cggcttgtgaggtgagaattgtccccacttataaaca 21209997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 15480650 - 15480564
Alignment:
Q  83 atatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatt--tcccccacatataaacac 167  Q
    ||||||||||||| ||||||| | || |||| |||||  |||||||||| ||||||| ||| |||||  |||||||| |||||||||    
T  15480650 atatcatcttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgatcccccacttataaacac 15480564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 17150408 - 17150471
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    |||||| |||||||||||||| |||||| ||||| ||||||| |||| |||| ||| |||||||    
T  17150408 ccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatctta 17150471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 7133957 - 7134023
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||||| |||||||||||| ||   |||||||||||||| |||| ||||||| ||||| |||||||    
T  7133957 cggaaacttgatagcaggtgatctggtagatcttggagaggctctgatatcatattagaaattgtgg 7134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 37405156 - 37405083
Alignment:
Q  107 ggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccat 180  Q
    |||||||||||||  |||||||||| ||| ||| ||||||||| ||||||| || |||||| | ||| ||||||    
T  37405156 ggtctaatacaaccccacaaaaccggcttttgaggtggggattgcccccacttacaaacactttttcagaccat 37405083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 170583 - 170655
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    |||||||||| ||||||| ||| ||| | ||||||| |||||||||||| |  |||||| |||||||| ||||    
T  170583 cacaaaaccggcttgtgaggtgaggactgcccccacttataaacacatgcttagaccatcttttgtccgatgt 170655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 154
Target Start/End: Complemental strand, 8098461 - 8098337
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||||| || |||| | ||  ||| |||||  ||||||||    
T  8098461 ccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcttaacacaaccccacaaaac 8098362  T
Q  130 cgacttgtgatgtggggatttcccc 154  Q
    || ||||||| ||| ||||| ||||    
T  8098361 cggcttgtgaggtgaggattgcccc 8098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 18333464 - 18333544
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||||||  |||||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  18333464 tcttagaatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat 18333544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 29909663 - 29909795
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||||||||||||||||| |||||||  |||   ||| || |||| |||| || |||| ||||| || |||| | || |||| |||||  ||||||||||    
T  29909663 gataacggaaacctgataacaggtggctcaaagaatcgtgaagaggctctgatgtcatattagaaatggtggttgggcctaacacaactccacaaaaccg 29909762  T
Q  132 acttgtgatgtggggatttcccccacatataaa 164  Q
     ||||||| ||| ||||| || |||| ||||||    
T  29909763 gcttgtgaggtgaggattgcctccacttataaa 29909795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 41666756 - 41666836
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  41666756 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 41666836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 25145659 - 25145787
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||| ||||||||||||| ||  ||| | || |||| |||||  ||||||     
T  25145659 tccgataacggaaacctgatagcaggtgggtcaatagatcttggagaggctctgatatcatcttagaaatcatggttgggcctaacacaaccccacaaat 25145758  T
Q  129 ccgacttgtgatgtggggatttcccccac 157  Q
    ||| ||||||| ||| ||||| |||||||    
T  25145759 ccggcttgtgaggtgaggattgcccccac 25145787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 38733293 - 38733230
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  38733293 gatagcggaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttaga 38733230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 4112716 - 4112785
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattg 100  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||| ||||    
T  4112716 cgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatcttagaaattg 4112785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 51460382 - 51460519
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||| |||| ||||||| ||||| ||| ||| | || |||| |||||  ||||||||    
T  51460382 ccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcattttagaaattatggttgggcctaacacaaccccacaaaac 51460481  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacac 167  Q
     | ||||| | |||  |||| || |||| |||||||||    
T  51460482 tggcttgtaaagtgaagattaccaccacttataaacac 51460519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 4112953 - 4113085
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||||||||  |||||  |||| |||||||||||| |||  ||| ||||||||| || |||| | || |||| |||||  |||||||||| ||||    
T  4112953 cggaaacctgatagatggtggctcaatggatcttggagaggctccgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttg 4113052  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| ||||| ||||||| |||||||||||    
T  4113053 tgaggtgaggattgcccccacttataaacacat 4113085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 26177053 - 26176913
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| |||||| |||||||||||||| ||||| |||||||||||| |||| ||||||||||||| || | || | || |||| |||||  |||||||    
T  26177053 tccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcgcggttgggcctaacacaaccccacaaaa 26176954  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||  || ||| ||| ||||| ||| ||| ||||| |||||    
T  26176953 ccggtttttgaggtgaggattgccctcacttataagcacat 26176913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 27413491 - 27413372
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| |||||| |||||| ||||||||| |||||||||||||||| |||| ||||||||||||| || |||| | |  |||| |||||  |||||||     
T  27413491 ccgatagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcatcttagaaatcgtggttggacctaacacaacctcacaaaat 27413392  T
Q  130 cgacttgtgatgtggggatt 149  Q
    || ||||||| ||| |||||    
T  27413391 cggcttgtgaggtgaggatt 27413372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 4098343 - 4098481
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| | |||||||||| |||||||| ||||| ||||||| |||| |||| ||| || |||||| || |||| | || |||| |||||  ||||||||    
T  4098343 ccgatagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaacttagaaatcgtggttgggcctaacacaacc-cacaaaac 4098441  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | |||||| | ||| ||||| ||||||| |||||||||||    
T  4098442 caacttgtaaggtgaggattgcccccacttataaacacat 4098481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 16163077 - 16162979
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||| ||||||||||||||||||||| ||| | |||||||||||| || | ||||||||||| | ||||||| |  |||||| |||||  |||||||    
T  16163077 ccgatagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaaaattgtggttgagtctaacacaaccccacaaaa 16162979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 30369971 - 30369829
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||||||||||  ||||| |||||||||||| |||| |||  |||||||| || |||| | || |||| |||||  ||||||||   |||||    
T  30369971 ggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgtggttgggcctaacacaaccccacaaaactatcttgt 30369872  T
Q  138 gatgtggggatttcccccacatataaacacatgttcggaccat 180  Q
    || ||| ||||| |||| || |||||||| ||  |||||||||    
T  30369871 gaggtgaggattgcccctacttataaacatattgtcggaccat 30369829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 31496310 - 31496376
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||  |||||||||||||  ||||||||    
T  31496310 tccgatagcgggaacctgatagcaggtggtccaatggatcttaaagagactctaatactatcttaga 31496376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 32783230 - 32783286
Alignment:
Q  39 gaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||||||||||||||||||| |||| ||||||| ||||||||| ||| |||||||||    
T  32783230 gaaacctgatagcaggtggtacaatggatcttgaagagactctgataccatcttaga 32783286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 51460003 - 51460063
Alignment:
Q  43 cctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtgg 103  Q
    ||||||||||||||| ||||| |||||||||||| | |||||| ||||||||| |||||||    
T  51460003 cctgatagcaggtggcccaatggatcttggagaggcgctaataccatcttagaaattgtgg 51460063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 167
Target Start/End: Original strand, 39348291 - 39348429
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaa 127  Q
    |||||||  |||||||||||||||||||| ||||| || |||||| ||| |||| ||| ||||||||| || || | | || |||| |||||  ||||||    
T  39348291 tccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatcgt-gttgggcctaacacaaccccacaaa 39348389  T
Q  128 accgacttgtgatgtggggatttcccccacatataaacac 167  Q
    ||||  |||||| ||| ||||| ||||||| |||||||||    
T  39348390 accggtttgtgaggtgaggattgcccccacttataaacac 39348429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 49868627 - 49868516
Alignment:
Q  33 ataacggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    ||||| ||||| |||||| || || || ||||||| |||||| ||||||||||||||||||||| ||||||| |  |||| | ||||||| ||||||| |    
T  49868627 ataacagaaacttgatagtagatgatcaaatagatattggagcagactctaatatcatcttagaaattgtggttgtgtcttagacaacagtacaaaactg 49868528  T
Q  132 acttgtgatgtg 143  Q
     ||||| |||||    
T  49868527 gcttgtaatgtg 49868516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 33156878 - 33156776
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||| ||||||||||||||||||||  ||||  |||||||||| || |||||||| ||||||||| || |||| | || |||| |||||  |||||||    
T  33156878 ccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 33156779  T
Q  129 ccg 131  Q
    |||    
T  33156778 ccg 33156776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 25145483 - 25145564
Alignment:
Q  88 atcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||||||| || |||| | ||||||| |||||  |||||||||||||||||| ||| ||||| |||||||  ||||||||||    
T  25145483 atcttagaaatcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgcccccactaataaacacat 25145564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 7307858 - 7307726
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    |||||||||||||||||  |  ||||| ||||||| || |||| | ||||||||||||| ||| ||| |||| |||| | ||    ||||||||||||||    
T  7307858 cggaaacctgatagcagacgacccaatggatcttgaagtgactatgatatcatcttagaaattatggttaggcctaacataatccaacaaaaccgacttg 7307759  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| | ||| || |||| |||||||||||    
T  7307758 tgaggtgagaattgcctccacttataaacacat 7307726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 8870865 - 8870989
Alignment:
Q  45 tgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtgg 144  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||| ||||||||| || |||| | |  |||| |||||  ||||||| || ||| ||| |||     
T  8870865 tgatagcaggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaacacaaccccacaaaaacggcttatgaggtga 8870964  T
Q  145 ggatttcccccacatataaacacat 169  Q
    | ||| |||| || |||||||||||    
T  8870965 gaattgccccaacttataaacacat 8870989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 51589136 - 51589000
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| || | ||| ||| ||||| || |||| | || |||| |||||  ||||||||    
T  51589136 ccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctttgataccatattagaaatggtggttgggcctaacacaaccccacaaaac 51589037  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| ||||| ||| ||| ||||||||    
T  51589036 cggcttgtgaggtgaggattgccctcacttataaaca 51589000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 194
Target Start/End: Complemental strand, 52907436 - 52907364
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    |||||||||  ||||||| ||| ||||| ||||||| |||||||||||||||  |||||||||| ||| ||||    
T  52907436 cacaaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttcaaaccatattttatccgatgt 52907364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 25713302 - 25713251
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    |||||| ||||||| ||||||||||||| ||||| |||||||||||| ||||    
T  25713302 ccgatagcggaaacttgatagcaggtggcccaatggatcttggagaggctct 25713251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 35772173 - 35772054
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||| ||| ||||| |||||||   || |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  35772173 ccgatagcggaaacctgatagcagatggcccaatggatcttgagaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaac 35772074  T
Q  130 cgacttgtgatgtggggatt 149  Q
    || |||| || ||| |||||    
T  35772073 cggcttgcgaggtgaggatt 35772054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 38668269 - 38668130
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| | ||||||||||| ||||||  ||||| |||| ||||||| |||| ||| ||||||||| ||||||  | || |||| |||||  |||||||     
T  38668269 ccgatagcagaaacctgataacaggtgacccaatggatcatggagaggctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaat 38668170  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
     | |||||||  ||  |||| ||||||| |||||||||||    
T  38668169 tggcttgtgagatgatgattgcccccacttataaacacat 38668130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 52961491 - 52961440
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    |||||| ||||||||||||||||||||| ||||| ||||||| |||| ||||    
T  52961491 ccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctct 52961440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 12376470 - 12376520
Alignment:
Q  123 acaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttc 173  Q
    ||||||||||||||||| |||  |||| ||||||| |||||||||||||||    
T  12376470 acaaaaccgacttgtgaagtgaagattgcccccacttataaacacatgttc 12376520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 26173395 - 26173461
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||||| |||||||||||||||||||||||| || ||| | | |||| |||| ||||||| |||||    
T  26173395 tccgatagcggaaacctgatagcaggtggtccgatggatatcgaagaggctctgatatcattttaga 26173461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 26346919 - 26347047
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtga 139  Q
    |||||| ||||||||||||||||  ||| |||  ||| |||| ||||||||||||| || ||||  ||| |||| |||||  |||||||| | |||||||    
T  26346919 aaacctaatagcaggtggtccaacggattttgaggaggctctgatatcatcttagaaatcgtggtgagg-ctaacacaaccccacaaaacgggcttgtga 26347017  T
Q  140 tgtggggatttcccccacatataaacacat 169  Q
     ||| |||||  | |||| |||||||||||    
T  26347018 ggtgaggattgtctccacttataaacacat 26347047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 195
Target Start/End: Original strand, 40316038 - 40316155
Alignment:
Q  78 ctctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggac 177  Q
    |||||||| ||| ||||| || |||| | | ||||| |||||  |||||||||| ||| ||| ||| |||||  |||||| ||||||||||||||  ||     
T  40316038 ctctaataccatgttagaaatcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattgaccccacttataaacacatgtttagaa 40316137  T
Q  178 catattttgtccaatgta 195  Q
    ||| |||||||| |||||    
T  40316138 catcttttgtccgatgta 40316155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 40079237 - 40079157
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  40079237 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 40079157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 13353345 - 13353206
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| ||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  13353345 ccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaac 13353246  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||| | ||| ||||| ||||||| |||||||||||    
T  13353245 cggcttgtaaggtgaggattgcccccacttataaacacat 13353206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 33796470 - 33796331
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| ||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||    
T  33796470 ccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaac 33796371  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||| | ||| ||||| ||||||| |||||||||||    
T  33796370 cggcttgtaaggtgaggattgcccccacttataaacacat 33796331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 4868752 - 4868892
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    |||||||||||||||||||||||||||| |||   |||||||||| || |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  4868752 ccgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4868851  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||||||| ||| ||||| ||||||| |||||||||||    
T  4868852 ccggcttgtgaggtgaggattgcccccacttataaacacat 4868892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 9705165 - 9705025
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| |||||||||||||||||||| |||| | ||||||||| || |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  9705165 ccgataatggaaacctgatagcaggtggcccaacaaatcttggaggaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 9705066  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||||||| |||  |||| ||||||| |||||||||||    
T  9705065 ccgacttgtgaggtgatgattgcccccacttataaacacat 9705025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 12330126 - 12330258
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| ||| ||| ||||| || |||| | || |||| |||||  |||||||||| ||||    
T  12330126 cggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaaccggcttg 12330225  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
    ||| ||| || || ||||||| |||||||||||    
T  12330226 tgaggtgagggttgcccccacttataaacacat 12330258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 2736340 - 2736481
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaa 127  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |  || |||| ||||||| ||||| || |||| ||||  ||| ||||    |||||    
T  2736340 tccgataacggaaacctaatagcaggtggcccaatagatcttgaatcaggctctgatatcattttagaaatcgtggttaggcttaacacaatccaacaaa 2736439  T
Q  128 accgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    |||||||||||||||| | ||| ||||||| |||||||||||    
T  2736440 accgacttgtgatgtgagaattgcccccacttataaacacat 2736481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 6542883 - 6543022
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||||||||||||||||||| |||  ||||| ||||||| |||| |||| ||| |||||| || || |||| | ||||||| |||||  ||||||||    
T  6542883 ccgataacggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcgtggttgggtctaacacaaccccacaaaac 6542982  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||| ||| |||  |||| ||||||| |||||||||||    
T  6542983 cggcttctgaggtgatgattgcccccacttataaacacat 6543022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 11085724 - 11085589
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| ||||||||||||||||||||| ||||   ||||||||||| |||||| | ||||||||| || |||  | |  |||| ||||| ||||||||||    
T  11085724 cgatagcggaaacctgatagcaggtggcccaacgtatcttggagaggctctaaaaccatcttagaaatcgtgattggacctaacacaaccgcacaaaacc 11085625  T
Q  131 gacttgtgatgtggggatttcccccacatataaaca 166  Q
    | ||||||| ||| | ||| ||||||| ||||||||    
T  11085624 ggcttgtgaagtgagaattgcccccacttataaaca 11085589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 6237646 - 6237712
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||||| |||||||||| ||||| |||||||||| ||||||| ||||||||||||| |||||||||    
T  6237646 tccgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatcttaga 6237712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 30849349 - 30849481
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||||| ||||||||||||||||| ||||||  || |||| | ||||||||||||| || ||   ||||||||  |||||  |||||||||| ||||    
T  30849349 cggaaacctaatagcaggtggtccaatggatcttaaagggactttgatatcatcttagaaatcgtaattaggtctagcacaaccccacaaaaccggcttg 30849448  T
Q  137 tgatgtggggatttcccccacatataaacacat 169  Q
     |||||| ||||| | ||||| ||||| |||||    
T  30849449 cgatgtgaggattgctcccacttataagcacat 30849481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 33494675 - 33494547
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||||||||||  ||||| ||||| | ||||  ||| ||| ||||||||| || |||| | || |||| |||||  |||||||||| |||||    
T  33494675 ggaaacctgatagcaggtgacccaatggatctcgaagaggttctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgt 33494576  T
Q  138 gatgtggggatttcccccacatataaaca 166  Q
    || ||| ||||| ||||||| ||||||||    
T  33494575 gaggtgaggattgcccccacttataaaca 33494547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 7638790 - 7638853
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||| |||||||||||||||||||| ||||||||||||||||||  |||| ||||| |||||||    
T  7638790 gatagcggaaacctgatagcaggtgatccaatagatcttggagaagctctgatatcttcttaga 7638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 34345542 - 34345423
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||||| |||||||||||||||||||  |||||||| ||  |||| |||| |||| |||||||| || |||||| |  |||| |||||  |||||||    
T  34345542 tccgataactgaaacctgatagcaggtggctcaatagat-ttaaagaggctctgatattatcttagaaatcgtggctggagctaaaacaacttcacaaaa 34345444  T
Q  129 ccgacttgtgatgtggggatt 149  Q
    |||||| |||| |||| ||||    
T  34345443 ccgactagtgaagtggtgatt 34345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 3680156 - 3680017
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||| ||||||||||  || || ||| ||||||||  ||| ||| ||||||||| ||||||| | || |||| |||||  |||||||     
T  3680156 ccgatagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaat 3680057  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||||||   | ||||| ||||||  |||||||||||    
T  3680056 cgacttgtgagaggaggattgcccccagttataaacacat 3680017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 6400637 - 6400699
Alignment:
Q  107 ggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| |||||  |||||||||||||||||||||| ||||| || |||| |||||||||||    
T  6400637 ggtctaacacaaccccacaaaaccgacttgtgatgtgaggattgcctccacttataaacacat 6400699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 8001496 - 8001626
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttgga-gagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgactt 135  Q
    ||||||||||||||||||||| ||||  ||||||  | |||||||| ||| ||||||||| ||||||| | || |||| |||||   |||||| ||||||    
T  8001496 cggaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaacacaacccaacaaaatcgactt 8001595  T
Q  136 gtgatgtggggatttcccccacatataaaca 166  Q
     ||| |||  |||| ||||||| ||||||||    
T  8001596 atgaggtgaagattgcccccacttataaaca 8001626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 31961078 - 31961028
Alignment:
Q  39 gaaacctgatagcaggtggtccaatagatcttggagagactctaatatcat 89  Q
    ||||||||||||||||||| ||||| |||||||||||| |||| |||||||    
T  31961078 gaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcat 31961028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 3713484 - 3713347
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| ||||||| ||||| |||||||||||||   |||||||||| ||||  |||||||||||| ||||||| |  | |||| |||||   |||||| ||    
T  3713484 gatagcggaaacttgataccaggtggtccaatgtgtcttggagaggctctcgtatcatcttagaaattgtggttgtgcctaacacaaccttacaaaatcg 3713385  T
Q  132 acttgtgatgtggggatttcccccacatataaacacat 169  Q
     ||| ||||||| ||||| || | || |||||||||||    
T  3713384 gcttttgatgtgaggattgcctcaacttataaacacat 3713347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 28648888 - 28649025
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||| |||||||||||| ||  |||| ||||| ||||||| |||||| ||||||| |||| | | |  | || |||||  ||||||||    
T  28648888 ccgatagcggaaacctaatagcaggtggttcagcagatattggatagactctgatatcaacttagactttgtcgttggaccaaaaacaacctcacaaaac 28648987  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacac 167  Q
    | | |||||| ||| ||| | ||||||| |||||||||    
T  28648988 caatttgtgaagtgaggactgcccccacttataaacac 28649025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 9705339 - 9705259
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | ||||||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  9705339 tcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 9705259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 19712857 - 19712722
Alignment:
Q  33 ataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtcta--atacaacagcacaaaacc 130  Q
    ||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||||||||| || |||| | || |||  | |||||  |||||||||    
T  19712857 ataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatggtggttgggcctaacacacaaccccacaaaacc 19712758  T
Q  131 gacttgtgatgtggggatttcccccacatataaaca 166  Q
    | ||||||| ||| ||||| ||||||| ||||||||    
T  19712757 ggcttgtgaggtgaggattgcccccacttataaaca 19712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 164
Target Start/End: Complemental strand, 24554258 - 24554127
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| ||| ||||||||||||||||| ||||| ||||||| ||| ||||| ||| ||| ||||| ||| ||| |  | |||| |||||  ||||||||||    
T  24554258 gatagcggtaacctgatagcaggtgg-ccaatggatcttgaagacactctgataccatgttagaaattatggttgagactaacacaactccacaaaaccg 24554160  T
Q  132 acttgtgatgtggggatttcccccacatataaa 164  Q
     ||||||| |||  |||| ||||||| ||||||    
T  24554159 gcttgtgaggtgaagattgcccccacttataaa 24554127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 27653269 - 27653225
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||    
T  27653269 cacaaaaccgacttgtgaggtgaggatttcccccacttataaaca 27653225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 27656541 - 27656466
Alignment:
Q  91 ttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||| ||||||| | || |||| |||||  |||||||||| ||||||| ||| ||||||||||||| ||||||||    
T  27656541 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 27656466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 33631745 - 33631808
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    |||||| | ||||||||||| ||||||  |||||||||||||||||  |||| |||||||||||    
T  33631745 ccgatagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatcatctta 33631808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 2737203 - 2737249
Alignment:
Q  123 acaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||||||||||||||||| | ||| ||||||| |||||||||||    
T  2737203 acaaaaccgacttgtgatgtgagaattgcccccacttataaacacat 2737249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 13741001 - 13740924
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||||| ||||||| | || |||| |||||  |||||||||||||||||| ||| ||||| | ||||| ||||||||    
T  13741001 tcttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataaaca 13740924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 13746501 - 13746424
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaaca 166  Q
    ||||||| ||||||| | || |||| |||||  |||||||||||||||||| ||| ||||| | ||||| ||||||||    
T  13746501 tcttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtgaagtgaggattgctcccacttataaaca 13746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 4868576 - 4868656
Alignment:
Q  89 tcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||||||| || |||| | || |||| |||||  |||||||||| ||||||| ||| ||||| ||||||| |||||||||||    
T  4868576 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat 4868656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 15082082 - 15082114
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaa 62  Q
    ||||||| |||||||||||||||||||||||||    
T  15082082 ccgataatggaaacctgatagcaggtggtccaa 15082114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 20661010 - 20660966
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    |||| ||||||||| ||||| ||||||||||||||||||| ||||    
T  20661010 cggatacctgatagtaggtgatccaatagatcttggagaggctct 20660966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 2059 - 1921
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| ||||||||||||| ||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||    
T  2059 cgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaacc 1960  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||| | ||| ||||| ||||||| |||||||||||    
T  1959 ggcttgtaaggtgaggattgcccccacttataaacacat 1921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 5798 - 5660
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||||||||||||||||||||||||| ||||| ||| ||| |||| |||| ||| ||||||||| || |||| | ||||||| |||||  |||||||||    
T  5798 cgataacggaaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaacc 5699  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||| |  || ||||| ||||||| |||||||||||    
T  5698 ggcttgtaagatgaggattacccccacttataaacacat 5660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 11232370 - 11232508
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| ||||||||||||| ||||||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||    
T  11232370 cgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaacc 11232469  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||| | ||| ||||| ||||||| |||||||||||    
T  11232470 ggcttgtaaggtgaggattgcccccacttataaacacat 11232508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 169
Target Start/End: Complemental strand, 12688207 - 12688077
Alignment:
Q  39 gaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtg 138  Q
    ||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||| || |||  |  |||||| | |||  |||||||||| ||||||    
T  12688207 gaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaatcgtgtttgagtctaacataactccacaaaaccggcttgtg 12688108  T
Q  139 atgtggggatttcccccacatataaacacat 169  Q
    | ||||||||| ||| ||| |||||||||||    
T  12688107 aggtggggattgccctcacttataaacacat 12688077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 39052871 - 39053008
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccg 131  Q
    |||| |||||||||||||||||| || | ||| |||||||||||| |||||||| ||||||||| || || | | || |||| |||||  ||||||||||    
T  39052871 gatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccatcttagaaatcgttgttgggcctaacacaaccccacaaaaccg 39052970  T
Q  132 acttgtgatgtggggatttcccccacatataaacacat 169  Q
     ||||||| ||| ||||| ||||||| |||||||||||    
T  39052971 gcttgtgaggtgaggattgcccccacttataaacacat 39053008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 20301406 - 20301266
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| |||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  20301406 tccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaa 20301307  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | | ||||||| ||  ||||| ||||||| |||||||||||    
T  20301306 cgggcttgtgaggttaggattgcccccacttataaacacat 20301266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 21088038 - 21087898
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||| |||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||    
T  21088038 tccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacctcacaaaa 21087939  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | | ||||||| ||  ||||| ||||||| |||||||||||    
T  21087938 cgggcttgtgaggttaggattgcccccacttataaacacat 21087898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 5932124 - 5932263
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||| |||| ||| ||||||| | || |||| | || |||| |||||  ||||||||    
T  5932124 ccgataacggaaacgtgatagtaggtggtccaatggatcttggagaggctctgataccatcttaaaaatggtggttgggcctaacacaaccccacaaaac 5932223  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
     | ||||||| ||| || || ||||||| |||||||||||    
T  5932224 aggcttgtgaggtgaggcttgcccccacttataaacacat 5932263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 24532361 - 24532500
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||||| ||||||| || | |||| ||| ||||||||| ||  ||| | || |||| |||||  ||||||||    
T  24532361 ccgatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaac 24532460  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||||| |||  |||| ||||||| |||||||||||    
T  24532461 cggcttgtgaggtgatgattgcccccacttataaacacat 24532500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 41790801 - 41790664
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaacc 130  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| |||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||    
T  41790801 cgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaac-ccacaaaacc 41790703  T
Q  131 gacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||| ||| ||| |||||  |||||| |||||||||||    
T  41790702 ggcttatgaggtgaggattgtccccacttataaacacat 41790664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 8084261 - 8084132
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtga 139  Q
    ||||||||||||| |||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | ||||||| |||||  | |||||||  |||||||    
T  8084261 aaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggtctaacacaactccgcaaaaccagcttgtga 8084162  T
Q  140 tgtggggatttcccccacatataaacacat 169  Q
     ||| ||||| ||||||| |||||| ||||    
T  8084161 ggtgaggattgcccccacttataaatacat 8084132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 36917378 - 36917518
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||||||||||||| ||||  |||| | |||| |||||||||||| |||| ||| ||||||||| || |||| |  |  ||| |||||  |||||||    
T  36917378 tccgataacggaaacctaatagtgggtgattcaatggatcttggagaggctctgataccatcttagaaatggtggttgtgcttaacacaaccccacaaaa 36917477  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    | ||||||||||||| ||||| ||||||| |||||| ||||    
T  36917478 ctgacttgtgatgtgaggattacccccacttataaatacat 36917518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 155
Target Start/End: Original strand, 3157499 - 3157624
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| || |||||||||||||||||||||||| ||| |||||||| |||| ||||||||||| | || |||| |  | |||| |||||  ||||||||    
T  3157499 ccgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaatggtggttgagcctaacacaaccccacaaaac 3157598  T
Q  130 cgacttgtgatgtggggatttccccc 155  Q
     | ||||||| ||| ||||| |||||    
T  3157599 tggcttgtgaggtgaggattgccccc 3157624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 11232158 - 11232273
Alignment:
Q  54 gtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttccc 153  Q
    |||| ||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  |||||||||| ||||| | ||| ||||| |||    
T  11232158 gtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgccc 11232257  T
Q  154 ccacatataaacacat 169  Q
    |||| |||||||||||    
T  11232258 ccacttataaacacat 11232273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 18004269 - 18004332
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||| |||| ||| |||||||    
T  18004269 ccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 31197759 - 31197693
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||||| ||||||||||||||||||||| ||||| ||||| |||||| |||| ||| |||||||||    
T  31197759 tccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatcttaga 31197693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 37001373 - 37001233
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatct---tggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaa 126  Q
    |||||| ||||||||||| ||||||||| ||||| |||||   || |||| |||| ||| |||||| || || |||| | || |||| |||||  |||||    
T  37001373 ccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggttgggcctaacacaactccacaa 37001274  T
Q  127 aaccgacttgtgatgtggggatttcccccacatataaacac 167  Q
    ||||| ||||||| ||| ||||| ||||||| |||||||||    
T  37001273 aaccggcttgtgaggtgaggattgcccccacctataaacac 37001233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 10614889 - 10615022
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtga 139  Q
    |||| |||| |||||||||||||| |||||||||||| || | ||||||||||| | || |||| |  | ||||||||||  ||||||| || |||||||    
T  10614889 aaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatcttataaatcgtggttgagcctaatacaaccccacaaaatcggcttgtga 10614988  T
Q  140 tgtggggatttcccccacatataaacacatgttc 173  Q
     |||  |||| ||||||  | |||||||||||||    
T  10614989 ggtgaagattacccccatttgtaaacacatgttc 10615022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 10615538 - 10615473
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    |||||| ||||||||||||| |||||||| |||| |||||||||||| |||| ||| |||||||||    
T  10615538 ccgatagcggaaacctgatatcaggtggtacaatggatcttggagaggctctgataccatcttaga 10615473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 37868530 - 37868687
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttg 136  Q
    ||||||| ||||||| ||||| ||||| |||||||||||| || | ||| ||||||| | || |||| |||| |||| ||||   |||||||||  ||||    
T  37868530 cggaaacttgatagcgggtggcccaatggatcttggagaggctatgataccatcttaaaaatcgtggttaggcctaacacaattccacaaaaccagcttg 37868629  T
Q  137 tgatgtggggatttcccccacatataaacacatgttcggaccatattttgtccaatgt 194  Q
    ||| ||| ||||| ||||||   |||||||||||||| | ||||  ||||||| ||||    
T  37868630 tgaggtgaggattgcccccattaataaacacatgttcaggccatcatttgtccgatgt 37868687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 4828212 - 4828076
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||||| || |||| | || |||| |||||  ||||||||    
T  4828212 ccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagagatcgtggttgggcctaacacaaccccacaaaac 4828113  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    || ||||||| ||| |||||  |||||| ||||||||    
T  4828112 cggcttgtgaggtgaggattgtccccacttataaaca 4828076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 15042826 - 15042965
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagaga--ctctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||  || | ||| ||||||||| || |||| |||| |||| |||||  ||||||||    
T  15042826 gatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaatcgtggttaggcctaacacaaccccacaaaac 15042925  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||  ||  || ||  ||||| ||||||| |||||||||||    
T  15042926 cggtttacgaggtaaggattgcccccacttataaacacat 15042965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 19256760 - 19256896
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||| ||||| || |||| | || |||| |||||  ||||||||    
T  19256760 ccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaac 19256859  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
    |  ||||||| ||| ||||| ||||||| ||||||||    
T  19256860 ctgcttgtgaggtgaggattgcccccacttataaaca 19256896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 173
Target Start/End: Complemental strand, 10615774 - 10615631
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaa-cagcacaaaac 129  Q
    ||||| || |||| ||||||||||||||  ||| |||||| |||||  ||||||||||||||||| |  |||| |  | ||||||||| |  ||||||||    
T  10615774 cgatagcgaaaacgtgatagcaggtggtttaatggatcttagagaggttctaatatcatcttagaaaccgtggttgagcctaatacaacccccacaaaac 10615675  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacatgttc 173  Q
    |||||||| | | | ||||| ||| ||| |||||||||||||||    
T  10615674 cgacttgtaaggagaggattaccctcacttataaacacatgttc 10615631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 42049684 - 42049791
Alignment:
Q  87 catcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttcggaccatattttg 186  Q
    ||||||||| || |||| |||| |||  |||||  |||||||||| ||||||  ||| ||||| ||||||| ||||||||||||| | | |||| |||||    
T  42049684 catcttagaaatcgtggttaggcctaccacaacctcacaaaaccggcttgtggggtgaggattgcccccacttataaacacatgtccaggccatcttttg 42049783  T
Q  187 tccaatgt 194  Q
    ||||||||    
T  42049784 tccaatgt 42049791  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 20094745 - 20094870
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtga 139  Q
    ||||||||||| |||||| ||||| ||||||| ||| ||||| ||| || |||| | || |||| | || |||| |||||  |||||||||| ||||| |    
T  20094745 aaacctgataggaggtggcccaatggatcttgaagaaactctgataccaacttataaatcgtggttgggcctaa-acaaccccacaaaaccggcttgtaa 20094843  T
Q  140 tgtggggatttcccccacatataaaca 166  Q
     ||| ||||| ||||||||||||||||    
T  20094844 ggtgaggattgcccccacatataaaca 20094870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 12317191 - 12317051
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||||||||||||||||| ||||||| ||||   ||| || |||| |||| ||| ||||||||| || |||| | || |||| ||||   |||||||    
T  12317191 tccgataacggaaacctgataacaggtggcccaaagaatcgtgaagagtctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaa 12317092  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
     |  ||| ||| ||| ||||| ||||||| |||||||||||    
T  12317091 tcagcttatgaggtgaggattgcccccacttataaacacat 12317051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 26208198 - 26208325
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgtg 138  Q
    |||||||||||||||||| ||||  |||||| ||| || |||| ||| ||||||||| ||||||| | |  |||| |||||  || ||||| | ||| ||    
T  26208198 aaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggacctaacacaaccccataaaactggcttatg 26208297  T
Q  139 atgtggggatttcccccacatataaaca 166  Q
    |||||| |||| ||||||| ||||||||    
T  26208298 atgtggagattgcccccacttataaaca 26208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 40014710 - 40014659
Alignment:
Q  122 cacaaaaccgacttgtgatgtggggatttcccccacatataaacacatgttc 173  Q
    |||||||||||||||||| |||  |||| ||||||| |||||||||||||||    
T  40014710 cacaaaaccgacttgtgaagtgaagattgcccccacttataaacacatgttc 40014659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 4873634 - 4873740
Alignment:
Q  33 ataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccga 132  Q
    ||||||||||||||||||||| ||| |||| | || ||||| || || | ||| ||||| ||| ||||||| | || ||||||  ||| ||||||||||     
T  4873634 ataacggaaacctgatagcagctggcccaacaaattttggaaaggctttgataacatctgagaaattgtggttgggcctaataagacaacacaaaaccgg 4873733  T
Q  133 cttgtga 139  Q
    |||||||    
T  4873734 cttgtga 4873740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 3157184 - 3157217
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaat 63  Q
    |||||| |||||||||||||||||||||||||||    
T  3157184 ccgatagcggaaacctgatagcaggtggtccaat 3157217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 35682956 - 35683001
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggaga 75  Q
    |||||| ||||||||| ||||||||||| ||||| |||||||||||    
T  35682956 ccgatagcggaaacctaatagcaggtggcccaatggatcttggaga 35683001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 7669564 - 7669500
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatctta 93  Q
    |||||||  ||||||||||||||||||||  |||| ||||||| ||||||| | ||| |||||||    
T  7669564 tccgatagtggaaacctgatagcaggtggctcaatggatcttgaagagactttgataccatctta 7669500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 8860797 - 8860873
Alignment:
Q  44 ctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaaca 120  Q
    ||||||| ||||| || ||| ||||||| ||||||||| |||| |||||||| || |||| |  |||||||||||||    
T  8860797 ctgataggaggtgatctaatggatcttgaagagactctgatattatcttagaaatcgtggtttagtctaatacaaca 8860873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 9397824 - 9397884
Alignment:
Q  40 aaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattg 100  Q
    |||||||||| ||| ||||||||  |||||| |||||||||| | ||||||||||| ||||    
T  9397824 aaacctgatatcagatggtccaacggatcttagagagactctgaaatcatcttagaaattg 9397884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 16050173 - 16050037
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    ||||||||||||| |||||| ||||||| ||||   ||| || |||| |||| ||| ||| |||||  | |||| | ||||||| |||||  ||||||||    
T  16050173 ccgataacggaaatctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaagtcgtggttgggtctaacacaaccccacaaaac 16050074  T
Q  130 cgacttgtgatgtggggatttcccccacatataaaca 166  Q
     ||||||||| ||| ||||| ||  ||| ||||||||    
T  16050073 tgacttgtgaggtgaggattgccttcacttataaaca 16050037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 39052714 - 39052758
Alignment:
Q  32 gataacggaaacctgatagcaggtggtccaatagatcttggagag 76  Q
    |||| ||||||||||||||||||||| | ||| ||||||||||||    
T  39052714 gatagcggaaacctgatagcaggtggccaaattgatcttggagag 39052758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 5693 - 5833
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| |||||||||||||||||||||  |||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  | |||||    
T  5693 tccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccgcaaaa 5792  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    ||| |||||||  || ||||| ||||||| |||||||||||    
T  5793 ccggcttgtgagatgaggattgcccccacttataaacacat 5833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 12792 - 12652
Alignment:
Q  29 tccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaa 128  Q
    ||||||| || || |||||||| |||||| |||||  ||||||||||||| |||||| ||||||| | ||||||| | || |||| |||||  |||||||    
T  12792 tccgatagcgaaatcctgatagtaggtggcccaatttatcttggagagacgctaataccatcttaaaaattgtggttgggcctaacacaaccacacaaaa 12693  T
Q  129 ccgacttgtgatgtggggatttcccccacatataaacacat 169  Q
     |||||||||| ||| ||||| |||||||||||||| ||||    
T  12692 tcgacttgtgaggtgaggattgcccccacatataaatacat 12652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 81978 - 81879
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaaccgacttgt 137  Q
    |||||||||||| ||||| ||||||| |||||||||||| |||| ||| ||||||||| || |||| | || |||| |||||  ||||||||||||||||    
T  81978 ggaaacctgataacaggtagtccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgt 81879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 13234 - 13190
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  13234 cggaaacctgatagcaggtggtccaatggatcttggagagactct 13190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 10875 - 10831
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  10875 cggaaacctgatagcaggtggtccaatggatcttggagagactct 10831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 14541 - 14497
Alignment:
Q  37 cggaaacctgatagcaggtggtccaatagatcttggagagactct 81  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  14541 cggaaacctgatagcaggtggtccaatggatcttggagagactct 14497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 14447 - 14308
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||| ||  ||| ||||| |||||||||||| |||| ||| ||||||||| |  |||| | || |||| |||||  ||||||||    
T  14447 ccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggttgggcctaacacaaccccacaaaac 14348  T
Q  130 cgacttgtgatgtggggatttcccccacatataaacacat 169  Q
    || ||||||| |||  ||||  |||||| |||||||||||    
T  14347 cggcttgtgaggtgatgattgtccccacttataaacacat 14308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 3989 - 3864
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||| | ||||||||||||  ||| ||| ||| ||||| ||||||| |  | |||| |||||  ||||||||    
T  3989 ccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaacacaaccccacaaaac 3890  T
Q  130 cgacttgtgatgtggggatttccccc 155  Q
     | ||||||| ||| ||||| |||||    
T  3889 tggcttgtgaggtgaggattgccccc 3864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 4633 - 4508
Alignment:
Q  30 ccgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttagacattgtggctaggtctaatacaacagcacaaaac 129  Q
    |||||| ||||||||||||||||||||| ||| | ||||||||||||  ||| ||| ||| ||||| ||||||| |  | |||| |||||  ||||||||    
T  4633 ccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaacacaaccccacaaaac 4534  T
Q  130 cgacttgtgatgtggggatttccccc 155  Q
     | ||||||| ||| ||||| |||||    
T  4533 tggcttgtgaggtgaggattgccccc 4508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 102325 - 102389
Alignment:
Q  38 ggaaacctgatagcaggtggtccaatagatcttggag-agactctaatatcatcttagacattgtg 102  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||| | ||||||    
T  102325 ggaaacctgatagcaggt-gtccaatagattttggagaagactctgatatcatcttaaaaattgtg 102389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 41147 - 41211
Alignment:
Q  31 cgataacggaaacctgatagcaggtggtccaatagatcttggagagactctaatatcatcttaga 95  Q
    ||||| || |||| ||||||||||||| |||||  ||||||||||| |||| ||| |||||||||    
T  41147 cgatagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttaga 41211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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