View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12055_low_78 (Length: 205)

Name: NF12055_low_78
Description: NF12055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12055_low_78
NF12055_low_78
[»] chr6 (37 HSPs)
chr6 (1-190)||(32299203-32299392)
chr6 (7-111)||(32313338-32313442)
chr6 (41-119)||(30866157-30866235)
chr6 (60-130)||(7265595-7265665)
chr6 (81-130)||(9617442-9617491)
chr6 (61-113)||(43704-43756)
chr6 (82-130)||(9629392-9629440)
chr6 (15-130)||(426516-426631)
chr6 (59-113)||(19602200-19602254)
chr6 (60-118)||(31579239-31579297)
chr6 (17-130)||(7086739-7086852)
chr6 (85-130)||(7377991-7378036)
chr6 (17-106)||(8805598-8805687)
chr6 (81-130)||(9025496-9025545)
chr6 (41-106)||(34447384-34447449)
chr6 (17-113)||(1681702-1681798)
chr6 (78-122)||(2140491-2140535)
chr6 (79-119)||(13815448-13815488)
chr6 (80-132)||(15443702-15443754)
chr6 (18-106)||(21395334-21395421)
chr6 (81-124)||(5462694-5462737)
chr6 (68-119)||(7569181-7569232)
chr6 (60-131)||(9658866-9658937)
chr6 (19-106)||(17168489-17168576)
chr6 (61-112)||(33135233-33135284)
chr6 (16-130)||(9027121-9027235)
chr6 (18-108)||(10339150-10339240)
chr6 (80-130)||(11784218-11784268)
chr6 (81-119)||(19040360-19040398)
chr6 (64-130)||(33001291-33001357)
chr6 (17-130)||(7938060-7938173)
chr6 (17-130)||(9107372-9107485)
chr6 (81-130)||(20371112-20371161)
chr6 (82-127)||(26314639-26314684)
chr6 (80-113)||(29049892-29049925)
chr6 (18-130)||(16766642-16766754)
chr6 (59-119)||(26562675-26562735)
[»] chr4 (34 HSPs)
chr4 (15-130)||(33950078-33950193)
chr4 (15-119)||(903864-903968)
chr4 (41-119)||(19230322-19230400)
chr4 (81-130)||(8423720-8423769)
chr4 (15-119)||(36635266-36635370)
chr4 (54-113)||(12077809-12077868)
chr4 (79-138)||(43299965-43300024)
chr4 (79-138)||(43300622-43300681)
chr4 (53-111)||(8820388-8820446)
chr4 (17-107)||(19482612-19482702)
chr4 (17-119)||(24343451-24343553)
chr4 (58-111)||(43188597-43188650)
chr4 (82-119)||(46715487-46715524)
chr4 (77-113)||(5654610-5654646)
chr4 (81-113)||(24613720-24613752)
chr4 (83-118)||(2234260-2234295)
chr4 (78-113)||(10546153-10546188)
chr4 (16-70)||(4157101-4157155)
chr4 (81-119)||(7214535-7214573)
chr4 (79-113)||(18513260-18513294)
chr4 (41-111)||(20521870-20521940)
chr4 (59-113)||(20743297-20743351)
chr4 (81-119)||(22440613-22440651)
chr4 (68-134)||(29205439-29205505)
chr4 (64-113)||(5176975-5177024)
chr4 (81-130)||(5775360-5775409)
chr4 (81-110)||(34200293-34200322)
chr4 (81-130)||(54580025-54580074)
chr4 (20-108)||(847898-847986)
chr4 (68-108)||(9996835-9996875)
chr4 (19-119)||(14126124-14126224)
chr4 (81-113)||(14465094-14465126)
chr4 (17-113)||(34515893-34515989)
chr4 (60-119)||(35723397-35723457)
[»] chr1 (41 HSPs)
chr1 (17-130)||(2896123-2896236)
chr1 (60-119)||(6427337-6427396)
chr1 (20-130)||(9709767-9709877)
chr1 (81-134)||(1864878-1864931)
chr1 (17-120)||(34298380-34298483)
chr1 (60-115)||(40285671-40285726)
chr1 (17-119)||(398778-398880)
chr1 (60-130)||(36878448-36878518)
chr1 (51-108)||(9449032-9449089)
chr1 (21-118)||(25452162-25452259)
chr1 (17-130)||(38503264-38503377)
chr1 (17-130)||(47989442-47989554)
chr1 (79-119)||(17425106-17425146)
chr1 (60-108)||(36905984-36906032)
chr1 (79-119)||(40747786-40747826)
chr1 (65-113)||(42325552-42325600)
chr1 (54-113)||(27471585-27471644)
chr1 (83-130)||(44482240-44482287)
chr1 (80-118)||(2288181-2288219)
chr1 (81-119)||(7918224-7918262)
chr1 (79-113)||(11571591-11571625)
chr1 (81-119)||(40181879-40181917)
chr1 (72-130)||(41017406-41017464)
chr1 (17-134)||(609456-609573)
chr1 (81-110)||(1262892-1262921)
chr1 (81-130)||(1486711-1486760)
chr1 (80-113)||(3921674-3921707)
chr1 (79-163)||(11412736-11412821)
chr1 (54-119)||(19562634-19562699)
chr1 (81-130)||(38078663-38078712)
chr1 (17-106)||(41877496-41877585)
chr1 (87-128)||(46914043-46914084)
chr1 (79-111)||(351105-351137)
chr1 (65-133)||(10233245-10233313)
chr1 (81-113)||(12443479-12443511)
chr1 (60-108)||(16812530-16812578)
chr1 (83-119)||(19324572-19324608)
chr1 (83-119)||(25098568-25098604)
chr1 (83-119)||(25361896-25361932)
chr1 (81-113)||(31015051-31015083)
chr1 (79-115)||(48785281-48785317)
[»] chr8 (28 HSPs)
chr8 (17-119)||(44067460-44067562)
chr8 (80-130)||(12985399-12985449)
chr8 (81-130)||(14134707-14134756)
chr8 (81-129)||(31236580-31236628)
chr8 (18-132)||(11803204-11803318)
chr8 (81-134)||(7658471-7658524)
chr8 (81-130)||(12606831-12606880)
chr8 (17-110)||(22651920-22652013)
chr8 (18-130)||(926790-926902)
chr8 (77-113)||(3508056-3508092)
chr8 (81-113)||(29447129-29447161)
chr8 (17-108)||(29510328-29510419)
chr8 (80-119)||(34201059-34201098)
chr8 (81-119)||(3025559-3025597)
chr8 (60-130)||(13844598-13844668)
chr8 (60-130)||(33405386-33405456)
chr8 (81-119)||(34897093-34897131)
chr8 (81-130)||(4786340-4786389)
chr8 (81-130)||(11927088-11927137)
chr8 (80-113)||(14227229-14227262)
chr8 (81-130)||(20679397-20679446)
chr8 (17-106)||(22197768-22197857)
chr8 (81-134)||(26434188-26434241)
chr8 (80-113)||(37225762-37225795)
chr8 (81-134)||(38278173-38278226)
chr8 (81-113)||(29198498-29198530)
chr8 (79-115)||(34739078-34739114)
chr8 (82-130)||(40332200-40332248)
[»] chr2 (26 HSPs)
chr2 (62-132)||(18420434-18420504)
chr2 (17-134)||(31283992-31284110)
chr2 (54-118)||(21782832-21782896)
chr2 (54-119)||(35449494-35449559)
chr2 (19-119)||(21616708-21616808)
chr2 (17-129)||(23717977-23718082)
chr2 (17-129)||(24105649-24105754)
chr2 (56-130)||(37497103-37497177)
chr2 (77-118)||(4332930-4332971)
chr2 (18-118)||(18276466-18276566)
chr2 (60-128)||(30527599-30527667)
chr2 (79-130)||(31026701-31026752)
chr2 (80-131)||(44605140-44605191)
chr2 (79-113)||(18570978-18571012)
chr2 (79-113)||(30563415-30563449)
chr2 (81-131)||(39026826-39026876)
chr2 (63-133)||(39279665-39279735)
chr2 (79-113)||(40681988-40682022)
chr2 (60-113)||(896198-896251)
chr2 (81-118)||(2331802-2331839)
chr2 (81-130)||(5367200-5367249)
chr2 (80-113)||(19613632-19613665)
chr2 (60-113)||(27084249-27084302)
chr2 (17-118)||(28412294-28412395)
chr2 (81-130)||(44860328-44860377)
chr2 (60-132)||(31808064-31808136)
[»] chr7 (28 HSPs)
chr7 (62-130)||(6326686-6326754)
chr7 (54-130)||(20549772-20549848)
chr7 (15-113)||(25481844-25481942)
chr7 (17-113)||(30730981-30731077)
chr7 (60-108)||(45056925-45056973)
chr7 (68-119)||(12278830-12278881)
chr7 (79-138)||(44020981-44021040)
chr7 (78-113)||(44172909-44172944)
chr7 (79-129)||(3520345-3520395)
chr7 (77-119)||(16341500-16341542)
chr7 (81-190)||(21880160-21880269)
chr7 (17-119)||(26329395-26329497)
chr7 (79-113)||(38134425-38134459)
chr7 (41-130)||(598176-598265)
chr7 (81-118)||(2424622-2424659)
chr7 (81-130)||(7438714-7438763)
chr7 (81-118)||(11700811-11700848)
chr7 (81-130)||(19206058-19206107)
chr7 (81-130)||(19992009-19992058)
chr7 (81-130)||(24146824-24146873)
chr7 (81-118)||(29787383-29787420)
chr7 (60-113)||(32308107-32308160)
chr7 (80-132)||(15902829-15902881)
chr7 (77-113)||(21247755-21247791)
chr7 (86-130)||(22602712-22602756)
chr7 (54-130)||(25791634-25791709)
chr7 (81-113)||(35861972-35862004)
chr7 (77-113)||(41360914-41360950)
[»] chr5 (29 HSPs)
chr5 (81-128)||(30098334-30098381)
chr5 (81-130)||(22423814-22423863)
chr5 (80-113)||(9449476-9449509)
chr5 (81-134)||(23012406-23012459)
chr5 (17-113)||(24906320-24906416)
chr5 (81-130)||(28588676-28588725)
chr5 (13-113)||(39342396-39342494)
chr5 (20-163)||(30502357-30502500)
chr5 (20-163)||(30542700-30542843)
chr5 (77-117)||(32428941-32428981)
chr5 (15-119)||(6471902-6471998)
chr5 (79-113)||(11596474-11596508)
chr5 (60-134)||(17123035-17123109)
chr5 (17-131)||(17177024-17177138)
chr5 (80-130)||(17925174-17925224)
chr5 (79-113)||(18607116-18607150)
chr5 (79-113)||(28296334-28296368)
chr5 (81-130)||(3966511-3966560)
chr5 (17-118)||(6770487-6770588)
chr5 (29-130)||(16203797-16203898)
chr5 (17-106)||(19579645-19579734)
chr5 (60-113)||(31084310-31084363)
chr5 (79-132)||(38749563-38749616)
chr5 (64-113)||(43208293-43208342)
chr5 (79-119)||(5467991-5468031)
chr5 (59-119)||(7997179-7997239)
chr5 (81-129)||(17593725-17593773)
chr5 (79-111)||(19737503-19737535)
chr5 (79-119)||(32630748-32630788)
[»] chr3 (26 HSPs)
chr3 (15-130)||(25093444-25093559)
chr3 (32-110)||(13807128-13807206)
chr3 (17-119)||(24205054-24205156)
chr3 (79-165)||(15304569-15304656)
chr3 (81-119)||(9624649-9624687)
chr3 (42-119)||(25652044-25652121)
chr3 (41-117)||(11610489-11610565)
chr3 (18-113)||(4469795-4469890)
chr3 (21-108)||(11658764-11658850)
chr3 (41-119)||(4466613-4466691)
chr3 (60-130)||(39002019-39002089)
chr3 (79-113)||(52369781-52369815)
chr3 (81-130)||(7614417-7614466)
chr3 (81-130)||(7928458-7928507)
chr3 (81-130)||(8383265-8383314)
chr3 (81-118)||(11251986-11252023)
chr3 (40-105)||(12674528-12674593)
chr3 (84-113)||(12704056-12704085)
chr3 (77-130)||(20691323-20691376)
chr3 (81-134)||(24633399-24633452)
chr3 (81-130)||(38731226-38731275)
chr3 (80-113)||(46191364-46191397)
chr3 (81-130)||(47362570-47362619)
chr3 (81-113)||(5339116-5339148)
chr3 (79-111)||(9210846-9210878)
chr3 (60-132)||(17005619-17005691)
[»] scaffold0007 (1 HSPs)
scaffold0007 (17-119)||(225281-225383)
[»] scaffold0022 (2 HSPs)
scaffold0022 (54-126)||(90824-90896)
scaffold0022 (79-119)||(99899-99939)
[»] scaffold0085 (1 HSPs)
scaffold0085 (81-119)||(26401-26439)
[»] scaffold0027 (1 HSPs)
scaffold0027 (17-130)||(46626-46739)
[»] scaffold0020 (1 HSPs)
scaffold0020 (66-130)||(135314-135378)
[»] scaffold0110 (1 HSPs)
scaffold0110 (81-132)||(28858-28909)
[»] scaffold0044 (1 HSPs)
scaffold0044 (82-129)||(53189-53236)
[»] scaffold0571 (1 HSPs)
scaffold0571 (77-111)||(7694-7728)
[»] scaffold0154 (1 HSPs)
scaffold0154 (16-66)||(13394-13444)
[»] scaffold0036 (1 HSPs)
scaffold0036 (81-130)||(9749-9798)


Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 32299203 - 32299392
Alignment:
Q  1 aaagaaaatatgccatctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcac 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32299203 aaagacaatatgccatctatgaagcacggatacagacacagacaccagacataacacaaatactgacacaccaaccctgataataatttgagaaaatcac 32299302  T
Q  101 ataattcaatgtagttatacatgtcggtgttggaaaccgaccatgtcctacactaggacatgcttatttagagaaatgtccgtgcttcat 190  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  32299303 ataattcaatgtagttatacgtgtcggtgttgaaaaccgaccatgtcctacactaagacatgcttattcagagaaatgtctgtgcttcat 32299392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 32313338 - 32313442
Alignment:
Q  7 aatatgccatctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    |||||||||||||||||||| | ||||||||| | ||||||||||| | |||| ||||||||| || || |  ||||||| |||||||||| |||| |||    
T  32313338 aatatgccatctatgaagcatgaatacagacataaacaccagacatgatacaagcactgacacgccgacaccaataataagttgagaaaataacatgatt 32313437  T
Q  107 caatg 111  Q
    |||||    
T  32313438 caatg 32313442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 30866235 - 30866157
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||| ||||| ||||  |||| ||||||||||| | | ||||||||||||||||||||||||||||||||| |||||    
T  30866235 gacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattata 30866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 7265665 - 7265595
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||| ||||| | | |||||||||||||||||||||||||||| |||| |||||  |||||||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 9617442 - 9617491
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 43704 - 43756
Alignment:
Q  61 cactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||| |||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  43704 cactaacacaccaacactgctaataatttgagaaaatcacgtaattcaatgta 43756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 9629392 - 9629440
Alignment:
Q  82 aataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 426631 - 426516
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtag 114  Q
    |||||||||||| |||||||||||  || ||| ||||  ||||  |||||||||| || || | | ||||||||||| |||||||||||||| ||||||     
T  426631 atctatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaa 426532  T
Q  115 ttatacatgtcggtgt 130  Q
    ||| |  |||||||||    
T  426531 ttacaagtgtcggtgt 426516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 19602254 - 19602200
Alignment:
Q  59 aacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||| ||||||||||| ||||||||||||||||||||| | |||||||| ||||    
T  19602254 aacacggacacaccaacactgataataatttgagaaaatgatataattcagtgta 19602200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 31579297 - 31579239
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||| ||||||||| | | |||||||||||||||||||||||||||| |||| ||||    
T  31579297 acactgccacaccaacaccgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 7086739 - 7086852
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||| ||||||| ||| | | ||||||||  ||||| |||| |||||  |  | ||| |||||||||||||||||||||||||| | |||| ||    
T  7086739 ctatgaagcatggatacaaacacaaataccagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaatt 7086838  T
Q  117 atacatgtcggtgt 130  Q
    |||  |||||||||    
T  7086839 atatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 7377991 - 7378036
Alignment:
Q  85 aatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||    
T  7377991 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 8805687 - 8805598
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    |||||||||| ||||||| ||| | ||||||||||  ||||| |||| |||||  |  | ||| ||||||||||||||||||||||||||    
T  8805687 ctatgaagcatggatacatacacaaacaccagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatt 8805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 9025545 - 9025496
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||| |||| |||||  |||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 9025496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 34447449 - 34447384
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    |||||||||||||||||| ||| |||||| ||||| | | ||||||||||| ||||||| ||||||    
T  34447449 gacaccagacataacacagacaatgacacgccaacaccgttaataatttgataaaatcatataatt 34447384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 1681702 - 1681798
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||||| |||||||  |||  ||||| ||||| |||| || || |   ||||||||||| |||||||| ||||||| ||||    
T  1681702 ctatgaagcacggatacagacacagacaccgaacacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgta 1681798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 2140535 - 2140491
Alignment:
Q  78 tgataataatttgagaaaatcacataattcaatgtagttatacat 122  Q
    |||||||||||||||||||| |||||||||||||||  |||||||    
T  2140535 tgataataatttgagaaaatgacataattcaatgtaactatacat 2140491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 13815448 - 13815488
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  13815448 gataatattttgagaaaatcacataattcaatgaagttata 13815488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 15443702 - 15443754
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    |||||||||||||||||| |||||||||||| || ||||| |||| |||||||    
T  15443702 ataataatttgagaaaataacataattcaatataattatatatgttggtgttg 15443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 21395421 - 21395334
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    ||||||||||||||||||||| ||||||| || || |||   |||| ||||| ||||| | | ||||||||||||||||| ||||||||    
T  21395421 tatgaagcacggatacagacacagacaccggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatt 21395334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 5462694 - 5462737
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgt 124  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||    
T  5462694 taataatttgagaaaatcacataattcattgtaattatatatgt 5462737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 7569232 - 7569181
Alignment:
Q  68 acaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||| | ||||||||||||||||||| |||||||||| |||| |||||    
T  7569232 acaccaacacagataataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 9658866 - 9658937
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgtt 131  Q
    |||||||||| || || | | ||||||||| |||||||||||||||||| |||| |||||  ||||||||||    
T  9658866 acactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgtt 9658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 17168576 - 17168489
Alignment:
Q  19 atgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    |||||||||| ||||| |||  || | | ||||| ||| | |||||||||| ||||| ||||||||||||||||||||| | ||||||    
T  17168576 atgaagcacgaatacaaacacggaaatcggacatgacatagacactgacacgccaacactgataataatttgagaaaatgatataatt 17168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 33135233 - 33135284
Alignment:
Q  61 cactgacacaccaaccctgataataatttgagaaaatcacataattcaatgt 112  Q
    |||||||||  | ||||||||||||||||| |||||| ||||||||||||||    
T  33135233 cactgacacggcgaccctgataataatttgtgaaaataacataattcaatgt 33135284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 9027121 - 9027235
Alignment:
Q  16 tctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagt 115  Q
    |||||||||||| ||||| ||||  ||| || ||||  ||||  |||||||||| || || | | ||||||||||||| |||||||||||||  |||| |    
T  9027121 tctatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaat 9027220  T
Q  116 tatacatgtcggtgt 130  Q
    ||||  |||||||||    
T  9027221 tatatgtgtcggtgt 9027235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 10339240 - 10339150
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    |||||||||||||||||||||  |||||  ||||  |||  ||||||||||| || || | |  | |||||||||||||||||||||||||    
T  10339240 tatgaagcacggatacagacatggacacaggacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattca 10339150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 11784268 - 11784218
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||| | ||| |||| ||||| ||||||||||    
T  11784268 ataataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgt 11784218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 19040360 - 19040398
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattata 19040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 33001357 - 33001291
Alignment:
Q  64 tgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||| || || ||| ||||||||||| |||||||||||||| |||||| |||||  |||||||||    
T  33001357 tgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgt 33001291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 7938060 - 7938173
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||| ||||  |||||| ||||  |||   |||||||||| || || | | ||||||||||| ||||||| |||||| | |||| ||    
T  7938060 ctatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatt 7938159  T
Q  117 atacatgtcggtgt 130  Q
    |||  |||||||||    
T  7938160 ataagtgtcggtgt 7938173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 9107485 - 9107372
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||| ||||  |||||| ||||  ||||  ||||| |||| || || | | ||||||||||| ||||||||| |||||| |||| ||    
T  9107485 ctatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatt 9107386  T
Q  117 atacatgtcggtgt 130  Q
    | |  |||||||||    
T  9107385 acaagtgtcggtgt 9107372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 20371161 - 20371112
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||| |||||||  |||||  |||||||||    
T  20371161 taataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgt 20371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 26314684 - 26314639
Alignment:
Q  82 aataatttgagaaaatcacataattcaatgtagttatacatgtcgg 127  Q
    |||||||||| ||||||| ||||||||||||| ||||| |||||||    
T  26314684 aataatttgaaaaaatcatataattcaatgtaattatatatgtcgg 26314639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 29049892 - 29049925
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||| |||||||||||||||    
T  29049892 ataataatttgagaaaattacataattcaatgta 29049925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 16766642 - 16766754
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtta 117  Q
    ||||||||| |||||| ||||  |||||| ||||  |||   |||||||||| || || | | ||||||||||| |||||||||||||||| |||| |||    
T  16766642 tatgaagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T
Q  118 tacatgtcggtgt 130  Q
     |  |||||||||    
T  16766742 caagtgtcggtgt 16766754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 26562675 - 26562735
Alignment:
Q  59 aacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||| ||||| || || ||| ||| |||||||||||||||||||||||| |||| |||||    
T  26562675 aacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattata 26562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 33950078 - 33950193
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtag 114  Q
    ||||||||||||||| |||  |||  ||||||||||||||||| |||||||||||  |||| | | |||||||||||||||||||||||||| ||||||     
T  33950078 atctatgaagcacgggtacgaacacggacaccagacataacacgaacactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaa 33950177  T
Q  115 ttatacatgtcggtgt 130  Q
    | |||  |||||||||    
T  33950178 tcatatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 903864 - 903968
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtag 114  Q
    ||||||||||||||||||| ||||  | | |||||||||| ||  |||||||||||||  | | | |||||||||||||||||||||||||||| ||||     
T  903864 atctatgaagcacggatacggacacgggcgccagacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaa 903963  T
Q  115 ttata 119  Q
    |||||    
T  903964 ttata 903968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 19230400 - 19230322
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||| || |||||||||||||||   ||   ||||||||||||||||||| ||||||||||||||| |||||    
T  19230400 gacaccagacacaatacaaacactgacacatggacatagataataatttgagaaaataacataattcaatgtaattata 19230322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 8423769 - 8423720
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  8423769 taataatttgagaaaatcacataattcagtgtaattataaatgtcggtgt 8423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 36635266 - 36635370
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtag 114  Q
    |||||||||||| |||||  |||| ||||||| ||||  || |  |||||||||| ||||| |   |||||||||||||||||||||||||||| ||||     
T  36635266 atctatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaa 36635365  T
Q  115 ttata 119  Q
    |||||    
T  36635366 ttata 36635370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 12077809 - 12077868
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||| |||||||||||  |||  ||| |||||||||||||||||||||||||||||||||    
T  12077809 acacgaacactgacacgtcaatactgttaataatttgagaaaatcacataattcaatgta 12077868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 43300024 - 43299965
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaacc 138  Q
    ||||||||||||||||||| ||||||||||||||| | |||  || ||||||||||||||    
T  43300024 gataataatttgagaaaattacataattcaatgtaatcatatctgccggtgttggaaacc 43299965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 43300622 - 43300681
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaacc 138  Q
    ||||||||||||||||||| ||||||||||||||| | |||  ||||| |||||||||||    
T  43300622 gataataatttgagaaaattacataattcaatgtaatcatatttgtcgctgttggaaacc 43300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 8820388 - 8820446
Alignment:
Q  53 aacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatg 111  Q
    |||||||||||||||||  ||||   ||||||||||||| |||||||||||||||||||    
T  8820388 aacacaaacactgacacgtcaacatcgataataatttgataaaatcacataattcaatg 8820446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 19482612 - 19482702
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattc 107  Q
    |||||||||||||||||  ||| ||||||||||||  ||||| |||||||||| || || |   ||||||||||| || ||||||||||||    
T  19482612 ctatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattc 19482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 24343451 - 24343553
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||||||| |||||||  |||||| ||||  ||||  || | ||||| || || | ||||||||||||||||||| |||||||||| |||| ||    
T  24343451 ctatgaagcacggacacagacacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaatt 24343550  T
Q  117 ata 119  Q
    |||    
T  24343551 ata 24343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 43188597 - 43188650
Alignment:
Q  58 aaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatg 111  Q
    |||||| |||||||  || ||||||||||||||||||||| |||||||||||||    
T  43188597 aaacacagacacacagacactgataataatttgagaaaatgacataattcaatg 43188650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 46715524 - 46715487
Alignment:
Q  82 aataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||| |||||||||||||||||||||||||    
T  46715524 aataatttgagacaatcacataattcaatgtagttata 46715487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 5654646 - 5654610
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5654646 ctgataataatttgagaaaatgacataattcaatgta 5654610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 24613752 - 24613720
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||||||||||||||||    
T  24613752 taataatttgagaaaatcacataattcaatgta 24613720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 118
Target Start/End: Original strand, 2234260 - 2234295
Alignment:
Q  83 ataatttgagaaaatcacataattcaatgtagttat 118  Q
    ||||||||||||||||||||||||||||||| ||||    
T  2234260 ataatttgagaaaatcacataattcaatgtaattat 2234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 10546153 - 10546188
Alignment:
Q  78 tgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||| |||||||||||||||    
T  10546153 tgataataatttgagaaaatgacataattcaatgta 10546188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 4157101 - 4157155
Alignment:
Q  16 tctatgaagcacggatacagacagagacaccagacataacacaaacactgacaca 70  Q
    |||||||||||||||||| ||||  |||||||||||  ||||| |||||||||||    
T  4157101 tctatgaagcacggatacggacacggacaccagacacgacacagacactgacaca 4157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 7214573 - 7214535
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattata 7214535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 18513294 - 18513260
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  18513294 gataataatttgagaaaatgacataattcaatgta 18513260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 20521940 - 20521870
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatg 111  Q
    |||||||||||  ||||  |||||||||| || |  | ||||||||||||| |||||||||||||||||||    
T  20521940 gacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattcaatg 20521870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 20743351 - 20743297
Alignment:
Q  59 aacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||| || || | ||||||||||||||||||| |||||||||| ||||    
T  20743351 aacactgacacgccgacacggataataatttgagaaaatgacataattcagtgta 20743297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 22440651 - 22440613
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 29205439 - 29205505
Alignment:
Q  68 acaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    |||||||| | | ||||||||||| |||||||||||||||| |||| ||| |  |||||||||||||    
T  29205439 acaccaacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttgga 29205505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 5176975 - 5177024
Alignment:
Q  64 tgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||| |||||||  |||||||| ||||||||||| |||||||||||||||    
T  5176975 tgacgcaccaacattgataatattttgagaaaataacataattcaatgta 5177024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 5775409 - 5775360
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||| | |||| |||||  |||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 34200322 - 34200293
Alignment:
Q  81 taataatttgagaaaatcacataattcaat 110  Q
    ||||||||||||||||||||||||||||||    
T  34200322 taataatttgagaaaatcacataattcaat 34200293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 54580074 - 54580025
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| |||||||||||||||| |||| |||||  |||||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 847898 - 847986
Alignment:
Q  20 tgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    |||||||||||||| ||||  ||| || ||||  ||||| |||||||||| || |  | | ||||||||||||||||| ||||||||||    
T  847898 tgaagcacggatacggacatggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaattacataattca 847986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 9996835 - 9996875
Alignment:
Q  68 acaccaaccctgataataatttgagaaaatcacataattca 108  Q
    ||||| || |||| |||||||||||||||||||||||||||    
T  9996835 acaccgacactgacaataatttgagaaaatcacataattca 9996875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 14126224 - 14126124
Alignment:
Q  19 atgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttat 118  Q
    ||||||||  |||||||||| |||||   ||||  ||||| ||||| |||| || || ||| ||||||||||| ||| |||||||||||| |||| ||||    
T  14126224 atgaagcatagatacagacacagacagtggacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattat 14126125  T
Q  119 a 119  Q
    |    
T  14126124 a 14126124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 14465126 - 14465094
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||| |||||||||||||||||||||    
T  14465126 taataatttgaaaaaatcacataattcaatgta 14465094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 34515989 - 34515893
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||| || ||||| ||||||| | ||| |||||| ||||| |||||||||||  | || | ||||||||||  ||||||| |||||||||| ||||    
T  34515989 ctatgcagtacggacacagacacaaacatcagacacaacacgaacactgacacgtcgacacggataataattcaagaaaatgacataattcagtgta 34515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 35723457 - 35723397
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaat-cacataattcaatgtagttata 119  Q
    |||||||||| || || | | ||||||||||||||||| |||||||||||||||| |||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattata 35723397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 2896236 - 2896123
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||| |||||||||| ||  |||| | |||| |||||  |||||||||| || || | | |||||||||||||||||||||||||||| ||||| |    
T  2896236 ctatgaagaacggatacagtcacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagct 2896137  T
Q  117 atacatgtcggtgt 130  Q
    ||| ||||||||||    
T  2896136 atatatgtcggtgt 2896123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 6427337 - 6427396
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||| ||||| | | ||||||||||||||||||||||||||||||||| |||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattata 6427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 9709767 - 9709877
Alignment:
Q  20 tgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||  |||| ||||||  ||||  |||||||||  || || | | |||||||||||||||||||||||||||  |||| |||||    
T  9709767 tgaagcacggatacagacatggacatcagacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattata 9709866  T
Q  120 catgtcggtgt 130  Q
      |||||||||    
T  9709867 tgtgtcggtgt 9709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 1864931 - 1864878
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    |||||||||||||||||||||||||||| |||| |||||  |||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttgga 1864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 34298380 - 34298483
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||| ||| ||||||||||   ||||||||||  ||||  | ||||||||||| || |   |||||||||||||||||||||||||||| |||| ||    
T  34298380 ctatgaaacaccgatacagacacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatt 34298479  T
Q  117 atac 120  Q
    ||||    
T  34298480 atac 34298483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 40285726 - 40285671
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagt 115  Q
    |||||||||||||||| | | |||||||||||||||||| ||||||||| ||||||    
T  40285726 acactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagt 40285671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 398880 - 398778
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||| |||   |||||| ||||  ||||  |||||||||| || || | | ||||||||||| |||||||||||||||| |||| ||    
T  398880 ctatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T
Q  117 ata 119  Q
    |||    
T  398780 ata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 36878448 - 36878518
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||| || || | | |||||||||||||||||||||||||||| |||| |||||  |||||||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 9449089 - 9449032
Alignment:
Q  51 ataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    ||||||||||||| ||||||||||| |   ||||||||||| ||||||||||||||||    
T  9449089 ataacacaaacacagacacaccaacaccattaataatttgaaaaaatcacataattca 9449032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 25452259 - 25452162
Alignment:
Q  21 gaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||| ||||| |||||   ||||| ||| | |||| ||||  ||||| ||| |||||||||||||||||| ||||||||| |||| ||||    
T  25452259 gaagcacggatatagacacagacattggacatgacaaagacaccgacatgccaacactgctaataatttgagaaaatctcataattcagtgtaattat 25452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 38503264 - 38503377
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||| |||||||||| ||||  |||||  ||||| ||||  ||||| ||||||| || | | ||||||||||||||||||| ||| |||| |||| ||    
T  38503264 ctatgatgcacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaatt 38503363  T
Q  117 atacatgtcggtgt 130  Q
    |||  |||||||||    
T  38503364 atatgtgtcggtgt 38503377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 47989442 - 47989554
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||| |||||||||||  || ||||||||  ||||| |||||||||| || || |  |||||||||| | |||||||||||||||| |||| ||    
T  47989442 ctatgaagcatggatacagacacggataccagacacgacacagacactgacacgccgacac-aataataatttaaaaaaatcacataattcagtgtaatt 47989540  T
Q  117 atacatgtcggtgt 130  Q
    | |  |||||||||    
T  47989541 acaagtgtcggtgt 47989554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 17425146 - 17425106
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  17425146 gataataatttgataaaatcacataattcaatgtaattata 17425106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 36905984 - 36906032
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    |||||||||||||||| | | ||||||| ||||||||||||||||||||    
T  36905984 acactgacacaccaacaccgctaataatctgagaaaatcacataattca 36906032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 40747826 - 40747786
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  40747826 gataataatttgagaaaatgacataattcaatgtaattata 40747786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 42325552 - 42325600
Alignment:
Q  65 gacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||| | ||||||||||||||||||| |||||||||| ||||    
T  42325552 gacacaccaacaccgataataatttgagaaaatgacataattcagtgta 42325600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 27471644 - 27471585
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |  | | |||||||||||||||| ||||||||||| ||||    
T  27471644 acacaaacactgacacaccgataccgctaataatttgagaaaagcacataattcagtgta 27471585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 44482240 - 44482287
Alignment:
Q  83 ataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||| |||| |||||  |||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 44482287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 118
Target Start/End: Complemental strand, 2288219 - 2288181
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  2288219 ataataatttaagaaaatcacataattcaatgtaattat 2288181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 7918262 - 7918224
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattata 7918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 11571591 - 11571625
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  11571591 gataataatttgagaaaatgacataattcaatgta 11571625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 40181879 - 40181917
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattata 40181917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 41017464 - 41017406
Alignment:
Q  72 caaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||  ||||||||||||||||| |||||||| |||||| ||||| |||| |||||    
T  41017464 caaccctagtaataatttgagaaaatgacataatttaatgtaattatatatgttggtgt 41017406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 609573 - 609456
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||||| |||| |||| ||||| | ||||  |||  ||||||||||| || || |   ||||||||||||||||| |||||||||||  || |     
T  609573 ctatgaagcacgtatacggacacagacatcggacacgacatcaacactgacacgccgacaccactaataatttgagaaaattacataattcaacataatc 609474  T
Q  117 atacatgtcggtgttgga 134  Q
    ||| |||||||| |||||    
T  609473 atatatgtcggtattgga 609456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 1262892 - 1262921
Alignment:
Q  81 taataatttgagaaaatcacataattcaat 110  Q
    ||||||||||||||||||||||||||||||    
T  1262892 taataatttgagaaaatcacataattcaat 1262921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 1486760 - 1486711
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| |||||||||||||||| |||| |||||  |||||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 1486711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 3921674 - 3921707
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||| |||||||||||||||    
T  3921674 ataataatttgagaaaatgacataattcaatgta 3921707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 11412821 - 11412736
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaaccgac-catgtcctacactaggacatgc 163  Q
    ||||||||| ||||||||| ||||||||||||||  | |||  ||||||||||||| ||| ||   ||||| ||||||||||||||    
T  11412821 gataataatatgagaaaatgacataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgc 11412736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 19562699 - 19562634
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||| ||||||||||| || || ||| |||||||||||||||||| |||| |||| |||| |||||    
T  19562699 acacgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattata 19562634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 38078712 - 38078663
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| ||||||||||||||||||||| ||| |  |||||||||    
T  38078712 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgt 38078663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 41877585 - 41877496
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    ||||||||||||||||| ||||  || ||||||||  ||||| ||||||  || || || | | ||||||||||||||||| ||||||||    
T  41877585 ctatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatt 41877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 46914084 - 46914043
Alignment:
Q  87 tttgagaaaatcacataattcaatgtagttatacatgtcggt 128  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||    
T  46914084 tttgagaaaataacataattcaatgtaattataaatgtcggt 46914043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 351137 - 351105
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatg 111  Q
    ||||||||||||| |||||||||||||||||||    
T  351137 gataataatttgataaaatcacataattcaatg 351105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 10233245 - 10233313
Alignment:
Q  65 gacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgg 133  Q
    ||||||||||| |   |||||| ||||||||||||||||||||| |||| |||||  |||| |||||||    
T  10233245 gacacaccaacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttgg 10233313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 12443511 - 12443479
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||||||||||| ||||    
T  12443511 taataatttgagaaaatcacataattcagtgta 12443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 16812530 - 16812578
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    ||||||||||||| || |  |||||||||||| ||||||||||||||||    
T  16812530 acactgacacaccgacaccaataataatttgacaaaatcacataattca 16812578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 19324572 - 19324608
Alignment:
Q  83 ataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||| |||| |||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattata 19324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 25098604 - 25098568
Alignment:
Q  83 ataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||| |||| |||||    
T  25098604 ataatttgagaaaatcacataattcagtgtaattata 25098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 25361896 - 25361932
Alignment:
Q  83 ataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||| |||| |||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattata 25361932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 31015051 - 31015083
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||||||||||| ||||    
T  31015051 taataatttgagaaaatcacataattcagtgta 31015083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 48785317 - 48785281
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagt 115  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  48785317 gataataatttgagaaaataacataattcaatatagt 48785281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 44067460 - 44067562
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||||||| |||||||  |||||||||||  ||||  |||||||||| || || | ||||||||||||||||||| ||||||| || |||| ||    
T  44067460 ctatgaagcacggacacagacacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatt 44067559  T
Q  117 ata 119  Q
    |||    
T  44067560 ata 44067562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 12985399 - 12985449
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  12985399 ataataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgt 12985449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 14134707 - 14134756
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 31236628 - 31236580
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtg 129  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 11803204 - 11803318
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtta 117  Q
    |||||| |||| |||||||||   |||||| |||  |||| |||||||| ||||  || ||| ||||||||| |||||||||||||||||| |||| |||    
T  11803204 tatgaaacacgaatacagacacgaacaccaaacacgacacgaacactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaatta 11803303  T
Q  118 tacatgtcggtgttg 132  Q
    ||  ||| |||||||    
T  11803304 tatgtgttggtgttg 11803318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 7658471 - 7658524
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    ||||||||||||||||| |||||||||| |||| |||||  |||||||||||||    
T  7658471 taataatttgagaaaattacataattcagtgtaattatatttgtcggtgttgga 7658524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 12606880 - 12606831
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||||||||    
T  12606880 taataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt 12606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 22651920 - 22652013
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaat 110  Q
    |||||||| |||||||| ||||  |||||| ||||  ||||  |||||||||| || || | | ||||||||||| ||||||||||||||||||    
T  22651920 ctatgaagtacggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaat 22652013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 926902 - 926790
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtta 117  Q
    ||||||||||||||||  |||  |||||| ||||  ||||  |||||||||| ||||| ||  |||||||||||||||||| |||  |||| |||| |||    
T  926902 tatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaatta 926803  T
Q  118 tacatgtcggtgt 130  Q
    ||  |||||||||    
T  926802 taagtgtcggtgt 926790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 3508056 - 3508092
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3508056 ctgataataatttgagaaaataacataattcaatgta 3508092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 29447161 - 29447129
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||||||||||||||||    
T  29447161 taataatttgagaaaatcacataattcaatgta 29447129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 29510419 - 29510328
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    ||||||||||||||||| ||||  |||||| ||||  ||||  |||||||||| || || | | ||||||||||| ||||||||| ||||||    
T  29510419 ctatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattca 29510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 119
Target Start/End: Complemental strand, 34201098 - 34201059
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  34201098 ataataatttgagaaaatgacataattcaatgtaattata 34201059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 3025559 - 3025597
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 13844668 - 13844598
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||| ||||| || || ||| |||||||||||||||||||||||||| | |||| |||||  |||||||||    
T  13844668 acacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 33405456 - 33405386
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||   ||||| |||||||||||||||| ||||||||| | |||| |||||  |||||||||    
T  33405456 acactgacacactggccctgttaataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgt 33405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 34897093 - 34897131
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattata 34897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 4786389 - 4786340
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||| |||||||||||||||||| |||| |||||  |||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 11927137 - 11927088
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| |||||||||||||||| |||| |||||  |||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgt 11927088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 14227229 - 14227262
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||| |||||||||||||||    
T  14227229 ataataatttgagaaaataacataattcaatgta 14227262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 20679446 - 20679397
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||| |||| |||| |||||  |||||||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgt 20679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 22197857 - 22197768
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    |||||||||||||||  |||||  |||||| ||||  ||||| ||||| |||| ||||| | | ||||||||||| ||| ||||||||||    
T  22197857 ctatgaagcacggatctagacacggacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatt 22197768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 26434188 - 26434241
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    ||||| |||||||||||||||||||||||| || ||| |  |||||||||||||    
T  26434188 taatagtttgagaaaatcacataattcaatataattaaaagtgtcggtgttgga 26434241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 37225795 - 37225762
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||| |||||||||||||||    
T  37225795 ataataatttgagaaaataacataattcaatgta 37225762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 38278226 - 38278173
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    ||||||||| |||||||||||||||| ||| || |||||| | |||||||||||    
T  38278226 taataatttaagaaaatcacataatttaatataattatacgtatcggtgttgga 38278173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 29198530 - 29198498
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||| |||||||||||||||    
T  29198530 taataatttgagaaaatgacataattcaatgta 29198498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 34739114 - 34739078
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagt 115  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  34739114 gataataatatgagaaaatgacataattcaatgtagt 34739078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 40332200 - 40332248
Alignment:
Q  82 aataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||||||| |||| ||| |  |||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 18420504 - 18420434
Alignment:
Q  62 actgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||||||||| | |||||  |||||||||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttg 18420434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 31283992 - 31284110
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||| ||||| ||||  |||||| ||||||||||  ||||| |||| || || ||| ||||||||||||||||||||||||| || |||| ||    
T  31283992 ctatgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaatt 31284091  T
Q  117 a-tacatgtcggtgttgga 134  Q
    | ||  |||||||||||||    
T  31284092 attatgtgtcggtgttgga 31284110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 21782896 - 21782832
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||||||| || || ||| |||||||||||||||||||||||||||| |||| ||||    
T  21782896 acacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 35449494 - 35449559
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||  ||||| ||| ||||||||||||||||||||| |||||| |||| |||||    
T  35449494 acacaaacactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaattata 35449559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 21616708 - 21616808
Alignment:
Q  19 atgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttat 118  Q
    ||||||||||||||| |||| ||||||  ||||  ||||  |||| ||||| || || | | |||||||||||||||||||||||||||| |||| ||||    
T  21616708 atgaagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 21616807  T
Q  119 a 119  Q
    |    
T  21616808 a 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 23717977 - 23718082
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||||||||       | ||||| ||||  ||||||||||||| || | | ||||||||||||||| |||||||||||| |||| ||    
T  23717977 ctatgaagcacggatacagaca-------cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatt 23718069  T
Q  117 atacatgtcggtg 129  Q
    |||  ||||||||    
T  23718070 atatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 24105649 - 24105754
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||||||||       | ||||| ||||  ||||||||||||| || | | ||||||||||||||| |||||||||||| |||| ||    
T  24105649 ctatgaagcacggatacagaca-------cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaatt 24105741  T
Q  117 atacatgtcggtg 129  Q
    |||  ||||||||    
T  24105742 atatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 37497103 - 37497177
Alignment:
Q  56 acaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||| | || |||||||||||||||||||||  || ||||||||||| | |||  |||||||||    
T  37497103 acaaacactgacacatcgacactgataataatttgagaaaatgccacaattcaatgtaataatatctgtcggtgt 37497177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 4332930 - 4332971
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  4332930 ctgataataatttgggaaaatcacataattcaatgtaattat 4332971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 18276466 - 18276566
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtta 117  Q
    |||||||||||||||||||||  |||||| ||||  | ||| ||||||| |  || || | | |||||||||||||||||||| ||||||| |||| |||    
T  18276466 tatgaagcacggatacagacacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaatta 18276565  T
Q  118 t 118  Q
    |    
T  18276566 t 18276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 30527667 - 30527599
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggt 128  Q
    ||||||||||||| || ||| ||||||||||||||||||| |||||| | |||| |||||  |||||||    
T  30527667 acactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 31026701 - 31026752
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| ||||||| ||||||||||||||| | ||| ||||||||||    
T  31026701 gataataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgt 31026752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 44605191 - 44605140
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgtt 131  Q
    |||||||||||||||||| ||||||||||||||| ||| |  ||||||||||    
T  44605191 ataataatttgagaaaataacataattcaatgtaattacatgtgtcggtgtt 44605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 18570978 - 18571012
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  18570978 gataataatttgagaaaatgacataattcaatgta 18571012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 30563415 - 30563449
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  30563415 gataataatttgagaaaatgacataattcaatgta 30563449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 39026826 - 39026876
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgtt 131  Q
    |||||| |||||||||||||||| || |||||| ||||| |||||||||||    
T  39026826 taataacttgagaaaatcacatattttaatgtaattataaatgtcggtgtt 39026876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 39279665 - 39279735
Alignment:
Q  63 ctgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgg 133  Q
    ||||||| ||||| | | ||||||| ||||||||||| |||||||| |||| |||||  ||||||||||||    
T  39279665 ctgacacgccaacaccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttgg 39279735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 40681988 - 40682022
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  40681988 gataataatttgagaaaatgacataattcaatgta 40682022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 896198 - 896251
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||| || || ||| ||||| ||||||||||||||||| |||||||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgta 896251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 2331802 - 2331839
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  2331802 taataatttgagaaaatcacataattcagtgtatttat 2331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 5367200 - 5367249
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||| ||||||||||||||| |||| |||||  |||||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgt 5367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 19613665 - 19613632
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||| |||||||||||||||    
T  19613665 ataataatttgagaaaataacataattcaatgta 19613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 27084249 - 27084302
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||| ||||| || || ||| ||||||||||||||||||| |||||||||||||    
T  27084249 acacggacactccgacactgctaataatttgagaaaatcatataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 28412294 - 28412395
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||||| |||  ||||  |||||||||||  ||||  ||||| ||||  |||| | | ||||||||||| |||||||||||||||| |||| ||    
T  28412294 ctatgaagcacgaatatggacacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaatt 28412393  T
Q  117 at 118  Q
    ||    
T  28412394 at 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 44860328 - 44860377
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||| ||||||||| |||| |||||  |||||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgt 44860377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 31808064 - 31808136
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    ||||||||||||| || | | ||||||||| | |||||||||||||||| |||| |||||  |||| ||||||    
T  31808064 acactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttg 31808136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 6326686 - 6326754
Alignment:
Q  62 actgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||| | ||||||| |||| | |||||| ||||| ||||||||||    
T  6326686 actgacacaccaaccctgataataatttaaaaaaatcatataaataaatgtaattatatatgtcggtgt 6326754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 20549772 - 20549848
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||| ||||||||||||| || | | |||||||||||||||||||| ||||||| |||| |||||  |||||||||    
T  20549772 acacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 25481844 - 25481942
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||||||  |||| | |||| ||||   ||| |||||| || || | | ||||||||||| |||||||||||||||| ||||    
T  25481844 atctatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgta 25481942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 30730981 - 30731077
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||| ||||| ||||  |||||||||||  ||||| ||| || ||| || || | |  ||||||||||||||||||||||||||| ||||    
T  30730981 ctatgaagcacagatacggacacggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgta 30731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 45056973 - 45056925
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    |||| ||||| ||||| ||| ||||||||||||||||||||||||||||    
T  45056973 acacggacactccaacactgctaataatttgagaaaatcacataattca 45056925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 12278830 - 12278881
Alignment:
Q  68 acaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||| ||||||||||||| ||||||| |||||||||| |||| |||||    
T  12278830 acaccaacactgataataatttaagaaaatgacataattcagtgtaattata 12278881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 44020981 - 44021040
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaacc 138  Q
    ||||||||||||| ||||| |||||||||||||||   |||  |||||||||||||||||    
T  44020981 gataataatttgaaaaaattacataattcaatgtaaccatatctgtcggtgttggaaacc 44021040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 44172944 - 44172909
Alignment:
Q  78 tgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||| |||||||||||||||    
T  44172944 tgataataatttgagaaaatgacataattcaatgta 44172909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 3520395 - 3520345
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtg 129  Q
    |||||| |||||||||||||| ||||||||||||| |||||  ||||||||    
T  3520395 gataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 16341500 - 16341542
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||||| | |||| |||||    
T  16341500 ctgataataatttgagaaaatcacataattaagtgtaattata 16341542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 190
Target Start/End: Original strand, 21880160 - 21880269
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaaccgac-catgtcctacactaggacatgcttatttagagaaatgt 179  Q
    ||||||||||||||||| |||||||||| |||| ||| |  ||||||||| ||| | |||| ||||||| |||| |||||| || || |  ||||| |||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggaca-cgacacatgtccgacaccaggacacgcctaatccgagaagtgt 21880258  T
Q  180 ccgtgcttcat 190  Q
    |||||||||||    
T  21880259 ccgtgcttcat 21880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 26329497 - 26329395
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||||| |||||||||  |||||  ||||  ||||| |||||||||| || ||   | |||||||||||||||| |||| |||||| |||| ||    
T  26329497 ctatgaagcacgaatacagacacggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaatt 26329398  T
Q  117 ata 119  Q
    |||    
T  26329397 ata 26329395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 38134459 - 38134425
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  38134459 gataataatttgagaaaatgacataattcaatgta 38134425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 598176 - 598265
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||| ||||  ||||||||||| | || | | ||||||||| |||||||||| ||||| |||||| || ||  |||||||||    
T  598176 gacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgt 598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 2424622 - 2424659
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 7438714 - 7438763
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| ||||||||||||||||||||| ||| |  |||||||||    
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgt 7438763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 11700811 - 11700848
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttat 118  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  11700811 taataatttgacaaaatcacataattcaatgtaattat 11700848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 19206058 - 19206107
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||| | || |||||  |||||||||    
T  19206058 taataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 19992009 - 19992058
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||| |||| |||| |||||  |||||||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgt 19992058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 24146824 - 24146873
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||| |||||||||||||||||||| || |||||  |||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtgtcggtgt 24146873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 29787420 - 29787383
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  29787420 taataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 32308107 - 32308160
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||| || || | | |||||||||||||||||||||||||||| ||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 32308160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 15902829 - 15902881
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    |||||||||||| |||||||||||||| | |||| |||||  |||||||||||    
T  15902829 ataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttg 15902881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 21247791 - 21247755
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||| || ||||||||||||    
T  21247791 ctgataataatttgagaaaatgacgtaattcaatgta 21247755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 22602756 - 22602712
Alignment:
Q  86 atttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||||| |||| |||||  |||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 22602712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 25791634 - 25791709
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||| |||||||||| || || | | |||| |||||||||| ||||||||| |||||||||||||  |||||||||    
T  25791634 acacagacactgacacgccgacaccgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgt 25791709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 35861972 - 35862004
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||| |||||||||||||||||||||    
T  35861972 taataatttgaaaaaatcacataattcaatgta 35862004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 41360914 - 41360950
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||| |||||||||||||| |||||||||||||||    
T  41360914 ctgatattaatttgagaaaataacataattcaatgta 41360950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 30098334 - 30098381
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggt 128  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 22423863 - 22423814
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  22423863 taataatttgagaaaatcacataattcaatataattatatatgtcggtgt 22423814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 9449476 - 9449509
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||||||||||||||||    
T  9449476 ataataatttgagaaaatcacataattcaatgta 9449509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 23012459 - 23012406
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    ||||||||||||||||||| |||||| |||||| |||||  |||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttgga 23012406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 24906416 - 24906320
Alignment:
Q  17 ctatgaagcacggatacagaca-gagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||| ||| |||||||||| ||| |||| ||||  |||| ||||||||||| ||||| | ||||||||||||| ||||| |||||||||| ||||    
T  24906416 ctatgaaacaccgatacagacacgag-caccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgta 24906320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 28588725 - 28588676
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||||||||||| |||| |||||  |||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 39342396 - 39342494
Alignment:
Q  13 ccatctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgt 112  Q
    ||||||||||||||||| || || || ||||||||||||  ||||  |||| |||||  |||| | ||||||||||||| ||| | ||||||||||||||    
T  39342396 ccatctatgaagcacgggtatagccacagacaccagacacgacac--acacagacacgtcaactccgataataatttgaaaaattgacataattcaatgt 39342493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 30502500 - 30502357
Alignment:
Q  20 tgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||||| |||  |||||| ||||   |||| || |||| || | ||| | | |||||||||||||||||||| ||||||| |||| |||||    
T  30502500 tgaagcacggatacaaacacggacaccggacacgtcacatacgctgaaacccaaacaccgctaataatttgagaaaatcacttaattcagtgtaattata 30502401  T
Q  120 catgtcggtgttggaaaccgac-catgtcctacactaggacatgc 163  Q
      ||||||||| ||| | |||| ||||||| ||||| ||||||||    
T  30502400 tgtgtcggtgtcggaca-cgacacatgtccgacactgggacatgc 30502357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 30542843 - 30542700
Alignment:
Q  20 tgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||||| |||  |||||| ||||   |||| || |||| || | ||| | | |||||||||||||||||||| ||||||| |||| |||||    
T  30542843 tgaagcacggatacaaacacggacaccggacacgtcacatacgctgaaacccaaacaccgctaataatttgagaaaatcacttaattcagtgtaattata 30542744  T
Q  120 catgtcggtgttggaaaccgac-catgtcctacactaggacatgc 163  Q
      ||||||||| ||| | |||| ||||||| ||||| ||||||||    
T  30542743 tgtgtcggtgtcggaca-cgacacatgtccgacactgggacatgc 30542700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 32428981 - 32428941
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgtagtta 117  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  32428981 ctgataataatttgagaaagtgacataattcaatgtagtta 32428941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 6471998 - 6471902
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtag 114  Q
    ||||||||||||||| |||||||| ||| ||| ||||| ||||  ||||||||||  |        |||||||||||||||||||||||||||| ||||     
T  6471998 atctatgaagcacggttacagacacagaaaccggacatgacacggacactgacacggc--------taataatttgagaaaatcacataattcagtgtaa 6471907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 11596508 - 11596474
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  11596508 gataataatttgagaaaatgacataattcaatgta 11596474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 17123035 - 17123109
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    |||||||||| ||||| | | |||||||||||||||||||||||||  | |  | ||||| ||||||||||||||    
T  17123035 acactgacacgccaacaccgctaataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttgga 17123109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 17177138 - 17177024
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||| |||| |||||||||| |  || |  ||||||| || ||||| | | ||||||||||| ||||||| | |||||| |||| ||    
T  17177138 ctatgaagcacggatacggacacagacaccagatacgactcggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaatt 17177039  T
Q  117 atacatgtcggtgtt 131  Q
    | |  ||||||||||    
T  17177038 acaagtgtcggtgtt 17177024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 17925224 - 17925174
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||| ||||||||||||||||||||||| | |||  |||||||||    
T  17925224 ataataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgt 17925174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 18607150 - 18607116
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  18607150 gataataatttgagaaaataacataattcaatgta 18607116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 28296334 - 28296368
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  28296334 gataataatttgagaaaatgacataattcaatgta 28296368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 3966511 - 3966560
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||| |||||| |||| |||||  |||||||||    
T  3966511 taataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 3966560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 6770487 - 6770588
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||| || |  ||||||  |||| ||||  ||||||||||||  || |   ||||||||| |||||||||||||||||| |||| ||    
T  6770487 ctatgaagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtactt 6770586  T
Q  117 at 118  Q
    ||    
T  6770587 at 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 16203898 - 16203797
Alignment:
Q  29 gatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggt 128  Q
    |||||||||| |||||||  |||| ||||  ||||| |||  || || ||| |||||||||||||||||| ||||||| | |||| |||||  |||||||    
T  16203898 gatacagacacagacaccgaacatgacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggt 16203799  T
Q  129 gt 130  Q
    ||    
T  16203798 gt 16203797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 19579645 - 19579734
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataatt 106  Q
    |||||||||||||||||  |||  |||||| || | |||||  ||||||| || || || | | ||||||||||||||||||||||||||    
T  19579645 ctatgaagcacggatacgtacaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatt 19579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 31084310 - 31084363
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||| || || | | ||||||||||| |||||||||||||||||||||    
T  31084310 acactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgta 31084363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 38749616 - 38749563
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    ||||||||||||| ||||| ||||||||||||||| |||||  ||| |||||||    
T  38749616 gataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttg 38749563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 43208342 - 43208293
Alignment:
Q  64 tgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||| |||| | |||| |||||||||||||| |||||||||||||||    
T  43208342 tgacacatcaacaccgatagtaatttgagaaaatgacataattcaatgta 43208293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 5468031 - 5467991
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||| |||||||||||||||| |||| |||||    
T  5468031 gataataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 7997239 - 7997179
Alignment:
Q  59 aacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||| ||||| | ||||||||||||||||||| | ||||| || |||| |||||    
T  7997239 aacactgacacgccaacacggataataatttgagaaaatgatataatacagtgtaattata 7997179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 17593773 - 17593725
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtg 129  Q
    |||||||||||||||||||| ||||||| |||| ||||| |||| ||||    
T  17593773 taataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 19737535 - 19737503
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatg 111  Q
    ||||||||||||||||||| |||||||||||||    
T  19737535 gataataatttgagaaaattacataattcaatg 19737503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 32630788 - 32630748
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||||||||| | ||||||||||||| |||||    
T  32630788 gataataatttgagaaaattatataattcaatgtaattata 32630748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 25093444 - 25093559
Alignment:
Q  15 atctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtag 114  Q
    |||||||||| ||||||||| ||| ||||||| ||||  ||||  ||||| |||| || || ||| |||| |||||||||||||||| |||||| ||||     
T  25093444 atctatgaagtacggatacaaacacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaa 25093543  T
Q  115 ttatacatgtcggtgt 130  Q
    |||||  |||||||||    
T  25093544 ttatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 13807128 - 13807206
Alignment:
Q  32 acagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaat 110  Q
    ||||||| ||||||  ||||| |||| || ||| |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  13807128 acagacacagacactggacatgacacgaaaactaacacgccaacactgataacaatttgagaaaatcacataattcaat 13807206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 24205156 - 24205054
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    |||||||||||||| |||||||  |||||| ||||  ||||  |||||||||| || || | ||||||||||||||||||| ||||||| || |||| ||    
T  24205156 ctatgaagcacggacacagacacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatt 24205057  T
Q  117 ata 119  Q
    |||    
T  24205056 ata 24205054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 15304656 - 15304569
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttggaaaccgac-catgtcctacactaggacatgctt 165  Q
    ||||||||||| ||||||  ||||| |||||||||||||||  ||||||||| ||| |||||| | ||||| |||||| |||||||||    
T  15304656 gataataattttagaaaacaacatatttcaatgtagttatatgtgtcggtgtcggataccgacgcgtgtccaacactatgacatgctt 15304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 9624649 - 9624687
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  9624649 taataatttgagaaaatcacataattcaatgtaattata 9624687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 25652121 - 25652044
Alignment:
Q  42 acaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||  ||||  ||||| |||| ||||| | ||||||||||||||||||| | |||||||| ||||||||||    
T  25652121 acaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgtagttata 25652044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 11610489 - 11610565
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtta 117  Q
    |||| |||||| |||||| | |||||||| ||||| | | ||||||||| | |||||||||||||||| ||||||||    
T  11610489 gacatcagacacaacacagatactgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagtta 11610565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 4469795 - 4469890
Alignment:
Q  18 tatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||| | |||||  |||  ||||| ||| |||||| ||||  | |  |||||||| |||||||||||||||||| ||||    
T  4469795 tatgaagcacggatacagacacaaacacctaacaagacacagacattgacacgccaataccgccaataatttaagaaaatcacataattcagtgta 4469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 11658764 - 11658850
Alignment:
Q  21 gaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattca 108  Q
    |||||||||||||  ||| ||||||  ||||  ||||| ||||||||||||||||   | |||||||||||||||||| |||||||||    
T  11658764 gaagcacggatacgaacacagacacg-gacacgacacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattca 11658850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 4466691 - 4466613
Alignment:
Q  41 gacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||| ||||| |||| ||||||||||| || || | | ||||||||| ||||||||| |||||||| ||||| ||||    
T  4466691 gacaccggacatgacacgaacactgacactccgacaccggtaataatttaagaaaatcatataattcagtgtagctata 4466613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 39002019 - 39002089
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||| ||   ||||  ||||||| ||||||||||||||||||||| ||||| ||||| ||||    
T  39002019 acactgacacaccgacatggataggaatttgaaaaaatcacataattcaatgtaattatatatgtcagtgt 39002089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 52369781 - 52369815
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||| |||||||||||||||    
T  52369781 gataataatttgagaaaattacataattcaatgta 52369815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 7614466 - 7614417
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||| |||||||||||||||||| | || ||||| ||||||||||    
T  7614466 taataatttaagaaaatcacataattcagtataattatatatgtcggtgt 7614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 7928458 - 7928507
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||| |||||||||||||||| |||| |||||  |||||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 8383265 - 8383314
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||| |||||||| |||| |||||  |||||||||    
T  8383265 taataatttgagaaaatcatataattcagtgtaattataagtgtcggtgt 8383314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 11251986 - 11252023
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttat 118  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 12674593 - 12674528
Alignment:
Q  40 agacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataat 105  Q
    ||||||||||||  ||||  ||| ||||||||| || ||| ||||||||||||||||||| |||||    
T  12674593 agacaccagacacgacacggacattgacacaccgacactgctaataatttgagaaaatcaaataat 12674528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 113
Target Start/End: Original strand, 12704056 - 12704085
Alignment:
Q  84 taatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||||||||||||    
T  12704056 taatttgagaaaatcacataattcaatgta 12704085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 20691323 - 20691376
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||||||||||||||| |||||||||| |||| | |||  |||||||||    
T  20691323 ctgataataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 24633452 - 24633399
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttgga 134  Q
    ||||||||||  |||||||| |||||||||||| |||||  |||||||||||||    
T  24633452 taataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttgga 24633399  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 38731226 - 38731275
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||| | |||||||||||||||| ||||||||||  |||||||||    
T  38731226 taataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgt 38731275  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 46191397 - 46191364
Alignment:
Q  80 ataataatttgagaaaatcacataattcaatgta 113  Q
    ||||||||||||||||||||||||||| ||||||    
T  46191397 ataataatttgagaaaatcacataattaaatgta 46191364  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 47362570 - 47362619
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||||| ||||||| |||||||| |||||| ||||||||||| ||||    
T  47362570 taataatttaagaaaattacataattgaatgtaattatacatgtcagtgt 47362619  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 5339116 - 5339148
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgta 113  Q
    |||||||||||||||||||||||||| ||||||    
T  5339116 taataatttgagaaaatcacataatttaatgta 5339148  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 9210878 - 9210846
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatg 111  Q
    ||||||||||||||||||| |||||||||||||    
T  9210878 gataataatttgagaaaatgacataattcaatg 9210846  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 17005691 - 17005619
Alignment:
Q  60 acactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    |||||||| ||||||| |   ||||||||||| ||||||| |||||||| |||| |||||  |||||||||||    
T  17005691 acactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttg 17005619  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 225383 - 225281
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||| |||||| |||||||  |||||| ||||  ||||  |||||||||| || || | ||||||||||||||||||| ||||||| ||||||| ||    
T  225383 ctatgaaacacggacacagacacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaatt 225284  T
Q  117 ata 119  Q
    |||    
T  225283 ata 225281  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 90824 - 90896
Alignment:
Q  54 acacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcg 126  Q
    ||||| |||||||||||||||| |   ||||||||||||||||||| |||||||| |||| ||||| ||||||    
T  90824 acacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 99899 - 99939
Alignment:
Q  79 gataataatttgagaaaatcacataattcaatgtagttata 119  Q
    ||||||||||| ||||||| ||||||||||||||| |||||    
T  99899 gataataattttagaaaataacataattcaatgtaattata 99939  T

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Target: scaffold0085 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 26401 - 26439
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttata 119  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  26401 taataatttgagaaaatcacataattcaatgtcgttata 26439  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 46626 - 46739
Alignment:
Q  17 ctatgaagcacggatacagacagagacaccagacataacacaaacactgacacaccaaccctgataataatttgagaaaatcacataattcaatgtagtt 116  Q
    ||||||||||||||||| ||||  |||| | ||||  ||||  ||| |||||| || || | | ||||||||||| |||||||||||||||| |||| ||    
T  46626 ctatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatt 46725  T
Q  117 atacatgtcggtgt 130  Q
    | | ||||||||||    
T  46726 acaaatgtcggtgt 46739  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 135378 - 135314
Alignment:
Q  66 acacaccaaccctgataataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    ||||||| || ||| |||||||||||||||||||||||||||  |||| |||||  |||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgt 135314  T

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Target: scaffold0110 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 28858 - 28909
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgttg 132  Q
    ||||||||| |||||||| |||||||||||||| |||||  |||||||||||    
T  28858 taataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttg 28909  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  82 aataatttgagaaaatcacataattcaatgtagttatacatgtcggtg 129  Q
    ||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0571 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 111
Target Start/End: Original strand, 7694 - 7728
Alignment:
Q  77 ctgataataatttgagaaaatcacataattcaatg 111  Q
    ||||||||||||||||||||| |||||||||||||    
T  7694 ctgataataatttgagaaaatgacataattcaatg 7728  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 13394 - 13444
Alignment:
Q  16 tctatgaagcacggatacagacagagacaccagacataacacaaacactga 66  Q
    |||||||||||||||||||||||  |||||||||||| |||  ||||||||    
T  13394 tctatgaagcacggatacagacaccgacaccagacatcacatgaacactga 13444  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 9798 - 9749
Alignment:
Q  81 taataatttgagaaaatcacataattcaatgtagttatacatgtcggtgt 130  Q
    |||||||||||||||||||| ||||||| |||| |||||  |||||||||    
T  9798 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 9749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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