View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12057_high_11 (Length: 359)

Name: NF12057_high_11
Description: NF12057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12057_high_11
NF12057_high_11
[»] chr3 (12 HSPs)
chr3 (75-344)||(34235825-34236103)
chr3 (1-52)||(29057662-29057713)
chr3 (1-52)||(29846897-29846948)
chr3 (1-52)||(48117350-48117401)
chr3 (1-52)||(42718134-42718186)
chr3 (1-52)||(3484773-3484824)
chr3 (1-52)||(11056928-11056979)
chr3 (1-52)||(23868984-23869035)
chr3 (1-52)||(35368625-35368676)
chr3 (1-52)||(48490519-48490570)
chr3 (1-52)||(50745563-50745614)
chr3 (18-52)||(2280180-2280214)
[»] chr2 (9 HSPs)
chr2 (3-55)||(11828828-11828880)
chr2 (1-52)||(24727429-24727480)
chr2 (1-52)||(45202138-45202189)
chr2 (1-52)||(8482238-8482289)
chr2 (1-52)||(27538922-27538973)
chr2 (1-55)||(38598355-38598409)
chr2 (20-54)||(44201169-44201203)
chr2 (7-52)||(304995-305040)
chr2 (8-52)||(27329122-27329166)
[»] chr1 (14 HSPs)
chr1 (1-52)||(16252765-16252816)
chr1 (1-52)||(48256923-48256972)
chr1 (1-52)||(43757602-43757653)
chr1 (4-52)||(8312192-8312240)
chr1 (1-52)||(21446224-21446275)
chr1 (1-52)||(30414878-30414929)
chr1 (1-52)||(40139129-40139180)
chr1 (1-52)||(46903484-46903535)
chr1 (1-52)||(50460718-50460769)
chr1 (18-52)||(24158653-24158687)
chr1 (11-52)||(30596726-30596767)
chr1 (8-52)||(35030775-35030819)
chr1 (8-52)||(43612093-43612137)
chr1 (4-52)||(48028540-48028588)
[»] chr6 (5 HSPs)
chr6 (8-52)||(16121166-16121210)
chr6 (1-52)||(9395343-9395394)
chr6 (1-52)||(32135437-32135488)
chr6 (8-52)||(2165313-2165357)
chr6 (8-52)||(2176946-2176990)
[»] chr4 (14 HSPs)
chr4 (4-52)||(27384190-27384238)
chr4 (1-52)||(9827989-9828040)
chr4 (1-52)||(24310527-24310578)
chr4 (1-52)||(28899221-28899272)
chr4 (1-52)||(54848152-54848203)
chr4 (1-52)||(1868899-1868950)
chr4 (1-52)||(28676158-28676209)
chr4 (1-52)||(32365673-32365724)
chr4 (1-52)||(37731929-37731980)
chr4 (1-52)||(40983160-40983211)
chr4 (1-52)||(46686248-46686298)
chr4 (18-55)||(41170773-41170810)
chr4 (16-52)||(7795028-7795064)
chr4 (8-52)||(31413799-31413843)
[»] chr5 (7 HSPs)
chr5 (1-52)||(43153066-43153117)
chr5 (4-52)||(12878759-12878807)
chr5 (1-52)||(8442173-8442224)
chr5 (9-52)||(12203161-12203204)
chr5 (18-52)||(29765833-29765867)
chr5 (14-52)||(38387613-38387651)
chr5 (1-50)||(7080546-7080595)
[»] chr7 (10 HSPs)
chr7 (4-52)||(28862090-28862138)
chr7 (1-52)||(26041324-26041375)
chr7 (1-52)||(27866543-27866594)
chr7 (1-52)||(33465045-33465096)
chr7 (18-52)||(2600568-2600602)
chr7 (18-52)||(11789725-11789759)
chr7 (14-52)||(25272605-25272643)
chr7 (1-55)||(29923682-29923736)
chr7 (8-52)||(34992348-34992392)
chr7 (8-52)||(37848633-37848677)
[»] chr8 (4 HSPs)
chr8 (1-52)||(6243048-6243099)
chr8 (9-52)||(13924025-13924068)
chr8 (1-52)||(41776189-41776240)
chr8 (8-52)||(36675339-36675383)
[»] scaffold0286 (1 HSPs)
scaffold0286 (8-52)||(17052-17096)


Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 75 - 344
Target Start/End: Complemental strand, 34236103 - 34235825
Alignment:
Q  75 tattggttagaactcacatatttgaaatgtagagaagtagagtgtcgagattcaaaccatgtgactataatataat--------cagatgagttaagctc 166  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||| |||||||||        || |||||||||||||    
T  34236103 tattggttaaaactcacacatttgaaatgtagagaagtagagtgtcggaattcaaaccatgtcactgtaatataatatgctaaccatatgagttaagctc 34236004  T
Q  167 accgaacaaaataattaattttgactggacctaatttcattctttttaaagaatctaaattaatt-actttcttttaataatttgtaacgagaaataaaa 265  Q
    || |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34236003 acggaacaaaacaattaattttgactggacctaatttcattttttttaaagaatctaaattaatttactttcttttaataatttgtaacgagaaataaaa 34235904  T
Q  266 catttcgagtgtgagaaagaaagcacagtgtgagtgtgctgaagaagaagaagcaaagcaaagcgttttcgataggttt 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34235903 catttcgagtgtgagaaagaaagcacagtgtgagtgtgctgaagaagaagaagcaaagcaaagcgttttcgataggttt 34235825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29057713 - 29057662
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  29057713 atgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 29057662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29846897 - 29846948
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  29846897 atgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 29846948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48117401 - 48117350
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||||||||||  ||||||||||| |||||||||||    
T  48117401 atgtgagtatgaaagagaaagttgtacaaaaatggttgtataaatatcattt 48117350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42718186 - 42718134
Alignment:
Q  1 atgtgaatatgaaagagaaagttgt-actgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| |||||||||||| | | |||||||||||||||||||||||    
T  42718186 atgtgaatatgagagagaaagttgttaataaaatggttgtacaaatatcattt 42718134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3484824 - 3484773
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||| | ||||||||| |||||||||||||    
T  3484824 atgtgagtatgagagagaaagttgtaataaaatggttggacaaatatcattt 3484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11056928 - 11056979
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||||||||||||||||    |||| ||||||||||||||||||    
T  11056928 atgtgaatatgaaagagaaagttgtcaaaaaattgttgtacaaatatcattt 11056979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23868984 - 23869035
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||| ||||  | |||||||||||||||||||||||    
T  23868984 atgtgagtatgaaagagaaaattgttataaaatggttgtacaaatatcattt 23869035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35368676 - 35368625
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||| ||||||||||||||||||    
T  35368676 atgtgagtatgagagagaaagttgtacaaaaatagttgtacaaatatcattt 35368625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48490519 - 48490570
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  || ||||||||||||||||||||    
T  48490519 atgtgagtatgagagagaaagttgtacaaaagtggttgtacaaatatcattt 48490570  T

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Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 50745614 - 50745563
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  ||||| |||||||||||||||||    
T  50745614 atgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcattt 50745563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 2280214 - 2280180
Alignment:
Q  18 aaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||| |||||||||||||||||||||||    
T  2280214 aaagttgtactaaaatggttgtacaaatatcattt 2280180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11828828 - 11828880
Alignment:
Q  3 gtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcatttatc 55  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  11828828 gtgaatatgagagagaaagttgtacaaaaatggttgtacaaatatcatttatc 11828880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24727480 - 24727429
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  24727480 atgtgagtatgagagagaaagttgtaccaaaatggttgtacaaatatcattt 24727429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45202138 - 45202189
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| |||||||||||||   |||||||||||||||||||||||    
T  45202138 atgtgaatatgagagagaaagttgtaaaaaaatggttgtacaaatatcattt 45202189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8482238 - 8482289
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| ||||||||||||  | || ||||||||||||||||||||    
T  8482238 atgtgaatatgagagagaaagttgtcataaagtggttgtacaaatatcattt 8482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27538922 - 27538973
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||| | ||||||||||||||  |||||||||||||||||||||||    
T  27538922 atgtgagtatcatagagaaagttgtacaaaaatggttgtacaaatatcattt 27538973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38598355 - 38598409
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcatttatc 55  Q
    |||||| ||||| |||||| |||||||  |||||||| |||||||||||||||||    
T  38598355 atgtgagtatgagagagaaggttgtacaaaaatggttatacaaatatcatttatc 38598409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 44201169 - 44201203
Alignment:
Q  20 agttgtactgaaatggttgtacaaatatcatttat 54  Q
    ||||||| |||||||||||||||||||||||||||    
T  44201169 agttgtaatgaaatggttgtacaaatatcatttat 44201203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 304995 - 305040
Alignment:
Q  7 atatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||||  |||||||||||||||||| ||||    
T  304995 atatgagagagaaagttgtaccaaaatggttgtacaaatataattt 305040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 27329122 - 27329166
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||||||||||||||  ||||| |||||||||||||||||    
T  27329122 tatgagagagaaagttgtaccaaaatgattgtacaaatatcattt 27329166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16252765 - 16252816
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  16252765 atgtgagtatgaaagagaaagttgtacaaaaatggttgtacaaatatcattt 16252816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48256972 - 48256923
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  48256972 atgtgaatatgagagagaaagttgtac--aaatggttgtacaaatatcattt 48256923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43757653 - 43757602
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| |||||||||||||||||||   |||||||||||||||||||||||    
T  43757653 atgtgagtatgaaagagaaagttgtatcaaaatggttgtacaaatatcattt 43757602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 8312240 - 8312192
Alignment:
Q  4 tgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||||||||| || |||| ||||||| |||||||||||||||    
T  8312240 tgaatatgaaagagaaaattatactaaaatggtggtacaaatatcattt 8312192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21446224 - 21446275
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||| ||||| ||||| |||||||||||    
T  21446224 atgtgagtatgagagagaaagttgtactaaaatgattgtataaatatcattt 21446275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30414929 - 30414878
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| |||||| |||||||  |||||||||||||||||||||||    
T  30414929 atgtgagtatgagagagaaggttgtacaaaaatggttgtacaaatatcattt 30414878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40139180 - 40139129
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||  | |||||||||||||||||||||||    
T  40139180 atgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcattt 40139129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46903535 - 46903484
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| |||||||||||||   |||||||||||||||||||||||    
T  46903535 atgtgagtatgagagagaaagttgtatcaaaatggttgtacaaatatcattt 46903484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50460718 - 50460769
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| | ||||||||||||  |||||||||||||||||||||||    
T  50460718 atgtgagtatgagaaagaaagttgtacaaaaatggttgtacaaatatcattt 50460769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 24158687 - 24158653
Alignment:
Q  18 aaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||| ||||||||||||||||||||||||    
T  24158687 aaagttgtaccgaaatggttgtacaaatatcattt 24158653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 30596767 - 30596726
Alignment:
Q  11 gaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  30596767 gaaagagaaagttgtaccaaaatggttgtacatatatcattt 30596726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 35030775 - 35030819
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||||||||||||||  ||||||||||||||||| |||||    
T  35030775 tatgagagagaaagttgtacaaaaatggttgtacaaataacattt 35030819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 43612093 - 43612137
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||||||||||||  | |||||||||||||||||||||||    
T  43612093 tatgagagagaaagttgtcataaaatggttgtacaaatatcattt 43612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 48028588 - 48028540
Alignment:
Q  4 tgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||||||||||| |||  ||||| ||||||||||| |||||    
T  48028588 tgaatatgaaagagaaagttatacaaaaatgattgtacaaataacattt 48028540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 16121210 - 16121166
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  16121210 tatgaaagagaaagttgtacaaaaatggttgtacaaatatcattt 16121166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9395343 - 9395394
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||||||||||  |||| ||||||||||||||||||    
T  9395343 atgtgagtatgaaagagaaagttgtacaaaaatagttgtacaaatatcattt 9395394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32135437 - 32135488
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  ||||| |||||||||||||||||    
T  32135437 atgtgagtatgatagagaaagttgtacaaaaatgattgtacaaatatcattt 32135488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 2165313 - 2165357
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||| ||||||||||  |||||||||||||||||||||||    
T  2165313 tatgagagataaagttgtacaaaaatggttgtacaaatatcattt 2165357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 2176946 - 2176990
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||| ||||||||||  |||||||||||||||||||||||    
T  2176946 tatgagagataaagttgtacaaaaatggttgtacaaatatcattt 2176990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 27384238 - 27384190
Alignment:
Q  4 tgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  27384238 tgaatatgagagagaaagttgtaataaaatggttgtacaaatatcattt 27384190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9827989 - 9828040
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| | ||| ||||||||||||||| |||||||||||||||||||||||    
T  9827989 atgtgagtgtgagagagaaagttgtactaaaatggttgtacaaatatcattt 9828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24310527 - 24310578
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  24310527 atgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcattt 24310578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28899221 - 28899272
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| ||||||||||||||  ||||| |||||||||||||||||    
T  28899221 atgtgaatatgagagagaaagttgtaccaaaatgattgtacaaatatcattt 28899272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 54848203 - 54848152
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  54848203 atgtgaatatgagagagaaggttgtacaaaaatggttgtacaaatatcattt 54848152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1868899 - 1868950
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| | ||||||||||||  |||||||||||||||||||||||    
T  1868899 atgtgagtatgagatagaaagttgtacaaaaatggttgtacaaatatcattt 1868950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28676158 - 28676209
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||||||||    |||||||||||||||||||||||    
T  28676158 atgtgagtatgaaagagaaagttgtcacaaaatggttgtacaaatatcattt 28676209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32365673 - 32365724
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| ||||||||||||    |||||||||||||||||||||||    
T  32365673 atgtgaatatgagagagaaagttgtcacaaaatggttgtacaaatatcattt 32365724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37731980 - 37731929
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  ||||| |||||||||||||||||    
T  37731980 atgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcattt 37731929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40983211 - 40983160
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||| |||||| || |||| ||||||||||||||||||    
T  40983211 atgtgagtatgaaagagagagttgtcctaaaatagttgtacaaatatcattt 40983160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46686298 - 46686248
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  46686298 atgtgagtatgagagagaaagttgtaca-aaatggttgtacaaatatcattt 46686248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 41170810 - 41170773
Alignment:
Q  18 aaagttgtactgaaatggttgtacaaatatcatttatc 55  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  41170810 aaagttgtaccaaaatggttgtacaaatatcatttatc 41170773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 7795064 - 7795028
Alignment:
Q  16 agaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7795064 agaaagttgtacaaaaatggttgtacaaatatcattt 7795028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 31413799 - 31413843
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||||||||||||||  |||| ||||||||||||||||||    
T  31413799 tatgagagagaaagttgtacaaaaatagttgtacaaatatcattt 31413843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43153066 - 43153117
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  43153066 atgtgaatatgagagagaaagttgtacaaaaattgttgtacaaatatcattt 43153117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 12878807 - 12878759
Alignment:
Q  4 tgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||| |||||||||| || | |||||||||||||||||||||||    
T  12878807 tgaatatgagagagaaagttataataaaatggttgtacaaatatcattt 12878759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8442224 - 8442173
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||||||||| ||||||||||||||  ||||  |||||||||||||||||    
T  8442224 atgtgaatatgagagagaaagttgtacaaaaataattgtacaaatatcattt 8442173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 12203204 - 12203161
Alignment:
Q  9 atgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||| ||||||||||||||  |||||||||||||||||||||||    
T  12203204 atgagagagaaagttgtacaaaaatggttgtacaaatatcattt 12203161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 29765867 - 29765833
Alignment:
Q  18 aaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||| |||||||||||||||||||||||    
T  29765867 aaagttgtactaaaatggttgtacaaatatcattt 29765833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 38387651 - 38387613
Alignment:
Q  14 agagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  38387651 agagaaagttgtacaaaaatggttgtacaaatatcattt 38387613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7080595 - 7080546
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcat 50  Q
    |||||| ||||| ||||||||||||||  ||||| |||||||||||||||    
T  7080595 atgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcat 7080546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 28862090 - 28862138
Alignment:
Q  4 tgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||||||||||||||  | |||||| ||||||||||||||||    
T  28862090 tgaatatgaaagagaaagttgtcataaaatggatgtacaaatatcattt 28862138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26041375 - 26041324
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||||||||||||||||  | |||||||||||| ||||||||||    
T  26041375 atgtgagtatgaaagagaaagttgtcataaaatggttgtacgaatatcattt 26041324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27866543 - 27866594
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||| ||||||||||  |||||||||||||||||||||||    
T  27866543 atgtgagtatgagagataaagttgtacaaaaatggttgtacaaatatcattt 27866594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33465045 - 33465096
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||| ||||||  |||||||||||||||||||||||    
T  33465045 atgtgagtatgagagagaaaattgtacaaaaatggttgtacaaatatcattt 33465096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 2600568 - 2600602
Alignment:
Q  18 aaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||| |||||||||||||||||||||||    
T  2600568 aaagttgtactaaaatggttgtacaaatatcattt 2600602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 11789725 - 11789759
Alignment:
Q  18 aaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||| |||||||||||||||||||||||    
T  11789725 aaagttgtactaaaatggttgtacaaatatcattt 11789759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 25272643 - 25272605
Alignment:
Q  14 agagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  25272643 agagaaagttgtacaaaaatggttgtacaaatatcattt 25272605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29923736 - 29923682
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcatttatc 55  Q
    |||||| ||||| ||||||||||||||  ||||| |||||||||| |||||||||    
T  29923736 atgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatgtcatttatc 29923682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 34992348 - 34992392
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||||||||| ||||||  | |||||||||||||||||||||||    
T  34992348 tatgaaagagagagttgtcataaaatggttgtacaaatatcattt 34992392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 37848633 - 37848677
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||||||||||||||  ||||| |||||||||||||||||    
T  37848633 tatgagagagaaagttgtacaaaaatgattgtacaaatatcattt 37848677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6243099 - 6243048
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  ||||| |||||||||||||||||    
T  6243099 atgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcattt 6243048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 13924068 - 13924025
Alignment:
Q  9 atgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||| ||||||||||||||  |||||||||||||||||||||||    
T  13924068 atgagagagaaagttgtacaaaaatggttgtacaaatatcattt 13924025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41776240 - 41776189
Alignment:
Q  1 atgtgaatatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    |||||| ||||| ||||||||||||||  |||| ||||||||||||||||||    
T  41776240 atgtgagtatgagagagaaagttgtacaaaaatagttgtacaaatatcattt 41776189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 36675383 - 36675339
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||| ||||||||||  |||||||||||||||||||||||    
T  36675383 tatgagagaaaaagttgtacaaaaatggttgtacaaatatcattt 36675339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 17096 - 17052
Alignment:
Q  8 tatgaaagagaaagttgtactgaaatggttgtacaaatatcattt 52  Q
    ||||| ||| ||||||||||  |||||||||||||||||||||||    
T  17096 tatgagagataaagttgtacaaaaatggttgtacaaatatcattt 17052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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