View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12057_high_18 (Length: 271)
Name: NF12057_high_18
Description: NF12057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12057_high_18 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 46041231 - 46041414
Alignment:
| Q |
18 |
cttctgatcttagtctcttcactaatccattctgagaagtaactgccgtttccaaactaacaaccttacctacaagctcatcgatcatctctgcaatttc |
117 |
Q |
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| T |
46041231 |
cttctgatcttagtctcttcaccaatccattctgagaagtaactgccgtttccaaactaacaaccttacctacaagctcatcgatcatctctgcaatttc |
46041330 |
T |
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| Q |
118 |
tgtcatagtaagcgagtttccaaaatcttcctcaagcttttccttaatcttctcttgcaacatccctatatcatgttcaagcat |
201 |
Q |
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| T |
46041331 |
tgtcatagtaagcgagtttcccgaatcttcctcaagcttttccttaatcttctcttgcaacatccctatatcatgttcaagcat |
46041414 |
T |
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