View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12057_high_9 (Length: 380)

Name: NF12057_high_9
Description: NF12057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12057_high_9
NF12057_high_9
[»] chr8 (22 HSPs)
chr8 (10-168)||(4258985-4259144)
chr8 (193-235)||(33925147-33925189)
chr8 (193-235)||(11637142-11637184)
chr8 (193-235)||(14117464-14117506)
chr8 (187-235)||(4274362-4274410)
chr8 (193-237)||(36012033-36012077)
chr8 (199-235)||(39998171-39998207)
chr8 (193-228)||(31132732-31132767)
chr8 (193-235)||(2195470-2195512)
chr8 (193-235)||(5392051-5392093)
chr8 (193-235)||(7258430-7258472)
chr8 (193-235)||(8418365-8418407)
chr8 (193-235)||(14689962-14690004)
chr8 (193-235)||(14748769-14748811)
chr8 (193-235)||(28791310-28791352)
chr8 (193-235)||(32967340-32967382)
chr8 (193-235)||(33190972-33191014)
chr8 (193-235)||(44790485-44790527)
chr8 (193-234)||(3442485-3442526)
chr8 (190-235)||(10728985-10729030)
chr8 (194-235)||(42558644-42558685)
chr8 (193-233)||(44975814-44975854)
[»] chr4 (31 HSPs)
chr4 (193-234)||(44633159-44633200)
chr4 (193-235)||(35998180-35998222)
chr4 (193-235)||(39052964-39053006)
chr4 (187-235)||(42185859-42185907)
chr4 (193-235)||(17237045-17237087)
chr4 (193-235)||(25149453-25149495)
chr4 (193-235)||(29815160-29815202)
chr4 (193-235)||(38976993-38977035)
chr4 (193-235)||(41203739-41203781)
chr4 (193-233)||(22129136-22129176)
chr4 (193-235)||(1796305-1796347)
chr4 (193-235)||(3686013-3686055)
chr4 (193-235)||(10099788-10099830)
chr4 (197-235)||(12619694-12619732)
chr4 (193-235)||(18509843-18509885)
chr4 (193-235)||(18849822-18849864)
chr4 (193-235)||(22020573-22020615)
chr4 (193-235)||(22872451-22872493)
chr4 (193-235)||(29550790-29550832)
chr4 (193-235)||(37309700-37309742)
chr4 (193-235)||(38319913-38319955)
chr4 (193-235)||(42024264-42024306)
chr4 (193-235)||(42132815-42132857)
chr4 (193-235)||(47787910-47787952)
chr4 (193-235)||(49448843-49448885)
chr4 (193-235)||(51572291-51572333)
chr4 (193-235)||(55360411-55360453)
chr4 (198-235)||(20964351-20964388)
chr4 (187-235)||(4357564-4357612)
chr4 (199-235)||(36047163-36047199)
chr4 (199-235)||(49218845-49218881)
[»] chr5 (23 HSPs)
chr5 (193-235)||(8369760-8369802)
chr5 (193-235)||(19889597-19889639)
chr5 (193-235)||(15254767-15254809)
chr5 (193-235)||(17243018-17243060)
chr5 (197-235)||(36446751-36446789)
chr5 (193-231)||(43525480-43525518)
chr5 (193-234)||(22582936-22582977)
chr5 (199-235)||(25108581-25108617)
chr5 (199-235)||(25111212-25111248)
chr5 (199-235)||(25167673-25167709)
chr5 (199-235)||(25170303-25170339)
chr5 (193-235)||(858337-858379)
chr5 (193-235)||(4194642-4194684)
chr5 (193-235)||(5357881-5357923)
chr5 (193-235)||(11099541-11099583)
chr5 (193-235)||(15898193-15898235)
chr5 (193-235)||(35334590-35334632)
chr5 (193-235)||(35646153-35646195)
chr5 (197-235)||(36469158-36469196)
chr5 (193-235)||(39183691-39183733)
chr5 (193-235)||(42575702-42575744)
chr5 (198-235)||(13087805-13087842)
chr5 (10-42)||(38984193-38984225)
[»] chr2 (29 HSPs)
chr2 (193-235)||(4794575-4794617)
chr2 (196-235)||(5710998-5711037)
chr2 (189-235)||(3100398-3100444)
chr2 (193-235)||(3199900-3199942)
chr2 (193-235)||(7213477-7213519)
chr2 (193-235)||(7931559-7931601)
chr2 (193-235)||(9472424-9472466)
chr2 (193-235)||(23684961-23685003)
chr2 (193-235)||(28301436-28301478)
chr2 (199-235)||(5212021-5212057)
chr2 (193-233)||(33751463-33751503)
chr2 (51-98)||(24168284-24168331)
chr2 (193-232)||(37529137-37529176)
chr2 (187-234)||(44284383-44284430)
chr2 (193-235)||(1908557-1908599)
chr2 (197-235)||(6685726-6685764)
chr2 (193-235)||(10069648-10069690)
chr2 (193-235)||(13222070-13222112)
chr2 (193-235)||(19515883-19515925)
chr2 (193-235)||(28108438-28108480)
chr2 (193-235)||(28572210-28572252)
chr2 (193-235)||(28844061-28844103)
chr2 (193-235)||(33880160-33880202)
chr2 (193-235)||(41436081-41436123)
chr2 (193-235)||(43077789-43077831)
chr2 (193-235)||(43182276-43182318)
chr2 (193-235)||(44424326-44424368)
chr2 (194-235)||(4283082-4283123)
chr2 (195-235)||(3487398-3487438)
[»] scaffold0086 (1 HSPs)
scaffold0086 (187-235)||(5814-5862)
[»] chr7 (25 HSPs)
chr7 (187-235)||(31581506-31581554)
chr7 (197-235)||(2849261-2849299)
chr7 (193-239)||(23111589-23111635)
chr7 (193-235)||(25778746-25778788)
chr7 (193-235)||(30659543-30659585)
chr7 (193-235)||(37264315-37264357)
chr7 (193-235)||(38181937-38181979)
chr7 (193-235)||(46288494-46288536)
chr7 (193-234)||(9602863-9602904)
chr7 (193-234)||(9830434-9830475)
chr7 (187-236)||(12308374-12308423)
chr7 (187-235)||(23703912-23703960)
chr7 (193-235)||(2846739-2846781)
chr7 (193-235)||(5068361-5068403)
chr7 (193-235)||(7425941-7425983)
chr7 (193-235)||(14648982-14649024)
chr7 (193-235)||(30462662-30462704)
chr7 (193-235)||(30463018-30463060)
chr7 (193-235)||(32775985-32776027)
chr7 (193-235)||(34064217-34064259)
chr7 (193-235)||(37496460-37496502)
chr7 (193-235)||(38589736-38589778)
chr7 (193-235)||(43007896-43007938)
chr7 (193-235)||(44604540-44604582)
chr7 (194-235)||(1643401-1643442)
[»] scaffold0685 (1 HSPs)
scaffold0685 (193-235)||(6463-6505)
[»] scaffold0058 (1 HSPs)
scaffold0058 (193-235)||(14458-14500)
[»] scaffold0006 (1 HSPs)
scaffold0006 (193-235)||(229825-229867)
[»] chr6 (9 HSPs)
chr6 (193-235)||(33018007-33018049)
chr6 (187-235)||(33109369-33109417)
chr6 (193-235)||(3604663-3604705)
chr6 (193-235)||(6787297-6787339)
chr6 (193-235)||(15371926-15371968)
chr6 (193-235)||(31265781-31265823)
chr6 (193-235)||(34803770-34803812)
chr6 (198-235)||(15351446-15351483)
chr6 (199-235)||(117087-117123)
[»] chr3 (22 HSPs)
chr3 (193-235)||(1334844-1334886)
chr3 (193-235)||(21296566-21296608)
chr3 (193-235)||(32977853-32977895)
chr3 (193-235)||(43639579-43639621)
chr3 (193-235)||(46194269-46194311)
chr3 (193-235)||(50736103-50736145)
chr3 (193-235)||(50776710-50776752)
chr3 (187-235)||(9218141-9218189)
chr3 (193-235)||(1923092-1923134)
chr3 (193-235)||(5245414-5245456)
chr3 (193-235)||(21585473-21585515)
chr3 (193-235)||(32023164-32023206)
chr3 (193-235)||(37041936-37041978)
chr3 (197-235)||(39329813-39329851)
chr3 (193-231)||(41607726-41607764)
chr3 (193-235)||(47496171-47496213)
chr3 (193-231)||(48409586-48409624)
chr3 (193-235)||(53051028-53051070)
chr3 (193-235)||(54122287-54122329)
chr3 (193-234)||(47684769-47684810)
chr3 (187-235)||(38600869-38600917)
chr3 (187-235)||(41031568-41031616)
[»] chr1 (27 HSPs)
chr1 (193-235)||(2886173-2886215)
chr1 (193-235)||(4466218-4466260)
chr1 (193-235)||(8327719-8327761)
chr1 (193-235)||(26755978-26756020)
chr1 (193-235)||(36232853-36232895)
chr1 (193-235)||(50333937-50333979)
chr1 (193-235)||(52382450-52382492)
chr1 (193-235)||(705413-705455)
chr1 (193-235)||(2219512-2219554)
chr1 (193-235)||(2571365-2571407)
chr1 (193-235)||(3718913-3718955)
chr1 (193-235)||(10587645-10587687)
chr1 (193-235)||(16451633-16451675)
chr1 (193-235)||(16460786-16460828)
chr1 (193-235)||(17342830-17342872)
chr1 (193-235)||(18186270-18186312)
chr1 (193-235)||(24131464-24131506)
chr1 (193-235)||(27210031-27210073)
chr1 (193-235)||(28277102-28277144)
chr1 (193-235)||(28908095-28908137)
chr1 (193-235)||(29225755-29225797)
chr1 (193-235)||(29756206-29756248)
chr1 (193-235)||(33149275-33149317)
chr1 (193-235)||(37925310-37925352)
chr1 (203-235)||(29225472-29225504)
chr1 (199-235)||(46363475-46363511)
chr1 (193-229)||(52146725-52146761)
[»] scaffold0262 (1 HSPs)
scaffold0262 (193-235)||(12499-12541)
[»] scaffold0007 (1 HSPs)
scaffold0007 (193-235)||(230258-230300)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-235)||(394780-394822)
[»] scaffold0321 (1 HSPs)
scaffold0321 (193-230)||(9617-9654)
[»] scaffold0028 (1 HSPs)
scaffold0028 (187-235)||(26609-26657)


Alignment Details
Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 4258985 - 4259144
Alignment:
Q  10 gacatcaaagaaagacacaaa-attttatattgttatttttcggattgtagttttcggattcactaacaatctggttcgaattttatttttcagaccaag 108  Q
    ||||||||||||||||||||| |||  |||||||| || |  ||||| |||||| ||||  ||| ||  |||||||||| |||||||||| | ||||| |    
T  4258985 gacatcaaagaaagacacaaatattgcatattgtttttgtctggattttagtttccggaaacaccaatcatctggttcggattttattttccggaccagg 4259084  T
Q  109 ggtattttatgaatttttacatgacgcaggagaacacatgagggtggaaaaagtaatact 168  Q
     ||| |||  ||||||||  | | |||||||||||||| |||||||| ||||||||||||    
T  4259085 cgtacttttcgaatttttgtagggcgcaggagaacacaggagggtgggaaaagtaatact 4259144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 33925189 - 33925147
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  33925189 taactctaattaatactactttcacaactttcaattcaatata 33925147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 11637142 - 11637184
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  11637142 taactataattaatactactttcaccactctcaattcaatata 11637184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 14117464 - 14117506
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  14117464 taactctaattaatattactttcacaactttcaattcaatata 14117506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 4274410 - 4274362
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||| || |||||||||| |||||||||||||    
T  4274410 catttataactctaattaatattattttcaccactctcaattcaatata 4274362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 36012077 - 36012033
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatataaa 237  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||    
T  36012077 taactctaattaatactactttcaccgctcacaattcaatataaa 36012033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 39998171 - 39998207
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||| |||||||||||||    
T  39998171 taattaatactactttcaccactctcaattcaatata 39998207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 31132732 - 31132767
Alignment:
Q  193 taactctaattaatactactttcaccactttcaatt 228  Q
    ||||||||||||||||||||||||| ||||||||||    
T  31132732 taactctaattaatactactttcacaactttcaatt 31132767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 2195470 - 2195512
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  2195470 taactctaattaatactactttcatcactcccaattcaatata 2195512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 5392051 - 5392093
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  5392051 taactctaattaatactactttcaacactcccaattcaatata 5392093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 7258472 - 7258430
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  7258472 taactctaattaatactactttcatcactcccaattcaatata 7258430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 8418407 - 8418365
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    
T  8418407 taactctaattaatactactttcatcactctcaattcagtata 8418365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 14689962 - 14690004
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  14689962 taacactaattaatactactttcaccactcccaattcaatata 14690004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 14748811 - 14748769
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||||||||||||||| | |||||||||||||    
T  14748811 taacactaattaatactactttcaccattctcaattcaatata 14748769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 28791310 - 28791352
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  28791310 taactctaattaatactactttcacaactcccaattcaatata 28791352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 32967382 - 32967340
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  32967382 taactctaattaatactactttcatcattctcaattcaatata 32967340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 33191014 - 33190972
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||| |||||||||||| |||| ||||||||||||    
T  33191014 taactctaattagtactactttcacaacttccaattcaatata 33190972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 44790527 - 44790485
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||| |  ||||||||||||    
T  44790527 taactctaattaatactactttcaccattcccaattcaatata 44790485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 3442485 - 3442526
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatat 234  Q
    |||||||||||||||||| ||||| || ||||||||||||||    
T  3442485 taactctaattaatactattttcatcattttcaattcaatat 3442526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 10729030 - 10728985
Alignment:
Q  190 ttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| | ||||  ||||||||||||    
T  10729030 ttgtaactctaattaatactactttaatcactcccaattcaatata 10728985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 42558685 - 42558644
Alignment:
Q  194 aactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||| |||| | |||||||||||    
T  42558685 aactctaattaatactactttcatcactcttaattcaatata 42558644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 44975854 - 44975814
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaata 233  Q
    |||||||||||||||||||||||| |||  |||||||||||    
T  44975854 taactctaattaatactactttcatcacgctcaattcaata 44975814  T

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Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 44633159 - 44633200
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44633159 taactctaattaatactactttcaccactttcaattcaatat 44633200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 35998222 - 35998180
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  35998222 taactctaattaatactactttcaccactctcaattcaatata 35998180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 39053006 - 39052964
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  39053006 taactctaattaatactactttcaccactctcaattcaatata 39052964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 42185907 - 42185859
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  42185907 catttataactctaattaatactactttcatcactctcaattcaatata 42185859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 17237045 - 17237087
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  17237045 taactctaattaatactactttcatcgctttcaattcaatata 17237087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 25149453 - 25149495
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  25149453 taactctaattaatactactttcacaacttccaattcaatata 25149495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 29815202 - 29815160
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  29815202 taactctaattaatattactttcaccacttccaattcaatata 29815160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 38976993 - 38977035
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  38976993 taactctaattaatactactttcatcattttcaattcaatata 38977035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 41203739 - 41203781
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  41203739 taactctaattaatactacttttatcactttcaattcaatata 41203781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 22129176 - 22129136
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaata 233  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  22129176 taactctaattaatactactttcaccactcacaattcaata 22129136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 1796347 - 1796305
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||    
T  1796347 taactctaatttatactactttcacaacttccaattcaatata 1796305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 3686013 - 3686055
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  3686013 taactctaattaatattactttcatcactctcaattcaatata 3686055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 10099830 - 10099788
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  10099830 taactctaattaatactactttcacaactcccaattcaatata 10099788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 12619694 - 12619732
Alignment:
Q  197 tctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  12619694 tctaattaatactactttcatcactttaaattcaatata 12619732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 18509843 - 18509885
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||| ||||||||||| || |||||||||    
T  18509843 taactctaattaatactattttcaccacttacacttcaatata 18509885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 18849864 - 18849822
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  18849864 taactctaattaatattactttcacaacttccaattcaatata 18849822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 22020615 - 22020573
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  22020615 taactctaattattactactttcaccattctcaattcaatata 22020573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 22872493 - 22872451
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  22872493 taactctaattaatattactttcatcactctcaattcaatata 22872451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 29550832 - 29550790
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  29550832 taactctaattaatactactttcacaactcccaattcaatata 29550790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 37309700 - 37309742
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  37309700 taactctaattaatattactttcatcactctcaattcaatata 37309742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 38319913 - 38319955
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  38319913 taacactaattaatactactttcatcactctcaattcaatata 38319955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 42024306 - 42024264
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||    
T  42024306 taactataattaatactactttcatcacttccaattcaatata 42024264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 42132815 - 42132857
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||| |||||||||||||| ||||||||||||    
T  42132815 taacactaattaatattactttcaccacttccaattcaatata 42132857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 47787952 - 47787910
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || ||||||||| |||||    
T  47787952 taactctaattaatactactttcatcattttcaattccatata 47787910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 49448843 - 49448885
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  49448843 taactctaattaatactactttcatcattctcaattcaatata 49448885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 51572333 - 51572291
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||| | ||||| ||||||||||||    
T  51572333 taactctaattaatactacttttatcacttccaattcaatata 51572291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 55360453 - 55360411
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  55360453 taactctaattaatattactttcatcactctcaattcaatata 55360411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 20964388 - 20964351
Alignment:
Q  198 ctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  20964388 ctaattaatactactttcaccacttccaattcgatata 20964351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 4357564 - 4357612
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||| ||||| ||||  ||||||||||||    
T  4357564 catttataactctaattaatactattttcatcactcccaattcaatata 4357612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 36047199 - 36047163
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  36047199 taattaatattactttcaccactctcaattcaatata 36047163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 49218881 - 49218845
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  49218881 taattaatattactttcaccactctcaattcaatata 49218845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 8369802 - 8369760
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  8369802 taactctaattaatactactttcacaactttcaattcaatata 8369760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 19889639 - 19889597
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  19889639 taactctaattaatattactttcaccactttcaattcaatata 19889597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 15254767 - 15254809
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  15254767 taactctaattaatattactttcatcactttcaattcaatata 15254809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 17243060 - 17243018
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  17243060 taactctaattaatactactttcatcactctcaattcaatata 17243018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 36446789 - 36446751
Alignment:
Q  197 tctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36446789 tctaattaatactactttcatcactttcaattcaatata 36446751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 43525480 - 43525518
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaa 231  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43525480 taactctaattaatactactttcaccacttccaattcaa 43525518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 22582977 - 22582936
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatat 234  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  22582977 taactctaattaatactactttcacaacttccaattcaatat 22582936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 25108581 - 25108617
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25108581 taattaatactactttcaccacttccaattcaatata 25108617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 25111248 - 25111212
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25111248 taattaatactactttcaccacttccaattcaatata 25111212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 25167673 - 25167709
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25167673 taattaatactactttcaccacttccaattcaatata 25167709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 25170339 - 25170303
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25170339 taattaatactactttcaccacttccaattcaatata 25170303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 858337 - 858379
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||| ||||||    
T  858337 taactctaattaatactactttcatcactctcaattaaatata 858379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 4194642 - 4194684
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  4194642 taacactaattaatactactttcaccactcccaattcaatata 4194684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 5357923 - 5357881
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||||||||| |||| |||||||    
T  5357923 taactctaattaatattactttcaccacttccaatacaatata 5357881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 11099583 - 11099541
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  11099583 taactctaattaatactactttcatcactcccaattcaatata 11099541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 15898193 - 15898235
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||| ||||||||||||| |||||||||||||    
T  15898193 taacactaattaatattactttcaccactctcaattcaatata 15898235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 35334632 - 35334590
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  35334632 taactctaattaatactactttcatcactcccaattcaatata 35334590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 35646195 - 35646153
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| ||||  |||||||||||    
T  35646195 taactctaattaatactactttcacaacttctaattcaatata 35646153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 36469196 - 36469158
Alignment:
Q  197 tctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  36469196 tctaattaatactactttcatcacttttaattcaatata 36469158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 39183733 - 39183691
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  39183733 taactctaattaatattactttcatcactctcaattcaatata 39183691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 42575744 - 42575702
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||    
T  42575744 taactttaattaatactactttcacaacttccaattcaatata 42575702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 13087842 - 13087805
Alignment:
Q  198 ctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  13087842 ctaattaatattactttcaccactctcaattcaatata 13087805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 38984225 - 38984193
Alignment:
Q  10 gacatcaaagaaagacacaaaattttatattgt 42  Q
    ||||||||||||||||||||||||| |||||||    
T  38984225 gacatcaaagaaagacacaaaatttcatattgt 38984193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 4794575 - 4794617
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  4794575 taactctaattaatactactttcatcactttcaattcaatata 4794617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 5710998 - 5711037
Alignment:
Q  196 ctctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  5710998 ctctaattaatactactttcaccactctcaattcaatata 5711037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 3100398 - 3100444
Alignment:
Q  189 tttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  3100398 tttgtaactctaattaatactactttcacaacttccaatttaatata 3100444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 3199900 - 3199942
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  3199900 taactctaattaatactactttcaccactcccaattcaatata 3199942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 7213477 - 7213519
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  7213477 taactctaattaatactactttcacaactctcaattcaatata 7213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 7931601 - 7931559
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  7931601 taactctaattaatactactttcacaactctcaattcaatata 7931559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 9472424 - 9472466
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  9472424 taactataattaatactactttcaccactatcaattcaatata 9472466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 23684961 - 23685003
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  23684961 taactctaattaatactactttcatcactctcaattcaatata 23685003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 28301436 - 28301478
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  28301436 taactctaattaatactactttcatcactctcaattcaatata 28301478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 5212057 - 5212021
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5212057 taattaatactactttcacaactttcaattcaatata 5212021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 33751463 - 33751503
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaata 233  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  33751463 taactctaattaatactactttcatcactctcaattcaata 33751503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 24168331 - 24168284
Alignment:
Q  51 ggattgtagttttcggattcactaacaatctggttcgaattttatttt 98  Q
    |||||||||||| ||||  |||||||||||||||||| ||||||||||    
T  24168331 ggattgtagtttccggaaacactaacaatctggttcggattttatttt 24168284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 37529176 - 37529137
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaat 232  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  37529176 taactctaattaatattactttcaccacttccaattcaat 37529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 44284430 - 44284383
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatat 234  Q
    ||||| ||||||||||||||| |||||||| ||||||||||| |||||    
T  44284430 catttataactctaattaataatactttcatcactttcaatttaatat 44284383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 1908599 - 1908557
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| || ||||||||||| ||||||||||||    
T  1908599 taactctaattaatattattttcaccacttccaattcaatata 1908557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 6685764 - 6685726
Alignment:
Q  197 tctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  6685764 tctaattaatacaactttcaccacttccaattcaatata 6685726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 10069690 - 10069648
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  10069690 taactctaattaataatactttcatcactctcaattcaatata 10069648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 13222070 - 13222112
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||| |||||||||||||| ||||||||||||    
T  13222070 taacactaattaatattactttcaccacttccaattcaatata 13222112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 19515883 - 19515925
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||  |||| ||||||||||||    
T  19515883 taactctaattaatactactttcattacttacaattcaatata 19515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 28108480 - 28108438
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  28108480 taactctaattaatactactttcatcattctcaattcaatata 28108438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 28572210 - 28572252
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||    
T  28572210 taactgtaattaatactactttcacaacttccaattcaatata 28572252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 28844061 - 28844103
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  28844061 taactctaataaataatactttcaccactctcaattcaatata 28844103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 33880160 - 33880202
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||||||||  ||||||||||||    
T  33880160 taactctaattaatattactttcaccactcccaattcaatata 33880202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 41436081 - 41436123
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  41436081 taactctaattaatactactttcatcattctcaattcaatata 41436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 43077831 - 43077789
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| || |||||||||||||||    
T  43077831 taactctaattaatattactttcatcattttcaattcaatata 43077789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 43182276 - 43182318
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||    
T  43182276 taactttaattaatactattttcaccacttccaattcaatata 43182318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 44424368 - 44424326
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  44424368 taactctaattaatactactttcatcattctcaattcaatata 44424326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 4283123 - 4283082
Alignment:
Q  194 aactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||| |||||||||| |||||| |||||||||||||    
T  4283123 aactctaatttatactacttttaccactctcaattcaatata 4283082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 3487398 - 3487438
Alignment:
Q  195 actctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||| |||||||| |||| |||||||||||||    
T  3487398 actctaattaatattactttcatcactctcaattcaatata 3487438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 5814 - 5862
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  5814 catttataactttaattaatactactttcaccactctcaattcaatata 5862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 31581554 - 31581506
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||    
T  31581554 catttataactctaattaatactactttcatcattttcaattcaatata 31581506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 2849261 - 2849299
Alignment:
Q  197 tctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  2849261 tctaattaatactactttcaccactctcaattcaatata 2849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 23111635 - 23111589
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatataaaaa 239  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||    
T  23111635 taacactaattaatactactttcaccagtctcaattcaatataaaaa 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 25778746 - 25778788
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  25778746 taactctaattaatactactttcatcacttccaattcaatata 25778788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 30659585 - 30659543
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  30659585 taactctaattaatactactttcaccacttcaaattcaatata 30659543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 37264315 - 37264357
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  37264315 taactctaattaatactactttcaccactcccaattcaatata 37264357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 38181979 - 38181937
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  38181979 taactctaattaatactactttcacaacttccaattcaatata 38181937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 46288536 - 46288494
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  46288536 taactctaattaatactactttcataactttcaattcaatata 46288494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 9602863 - 9602904
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatat 234  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  9602863 taacactaattaatactactttcaccactctcaattcaatat 9602904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 9830434 - 9830475
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatat 234  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  9830434 taacactaattaatactactttcaccactctcaattcaatat 9830475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 12308374 - 12308423
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatataa 236  Q
    ||||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  12308374 catttataactctaattaatattactttcacaacttccaattcaatataa 12308423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 23703912 - 23703960
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||||||| | || |||||||||||||||    
T  23703912 catttataactctaattaatactacttttatcattttcaattcaatata 23703960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 2846781 - 2846739
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || || ||||||||||||    
T  2846781 taactctaattaatactactttcatcaattccaattcaatata 2846739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 5068403 - 5068361
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||||||| | |||||||||||    
T  5068403 taactctaattaatattactttcaccactcttaattcaatata 5068361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 7425983 - 7425941
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||| |||||||||||||||| |||| ||||||||||||    
T  7425983 taactctagttaatactactttcacaacttccaattcaatata 7425941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 14649024 - 14648982
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  14649024 taactctaattaatattactttcatcactctcaattcaatata 14648982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 30462662 - 30462704
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||| ||||| |||| |||||||||||||    
T  30462662 taactctaattaatactaatttcatcactctcaattcaatata 30462704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 30463018 - 30463060
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| || |||||||||||||||    
T  30463018 taactctaattaatattactttcatcattttcaattcaatata 30463060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 32775985 - 32776027
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||| |||||||||||||||||||  ||||||||||||    
T  32775985 taactctaaataatactactttcaccactcccaattcaatata 32776027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 34064217 - 34064259
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  34064217 taactctaattaatattactttcatcactctcaattcaatata 34064259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 37496502 - 37496460
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  37496502 taactttaattaatactactttcatcactctcaattcaatata 37496460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 38589736 - 38589778
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  38589736 taacactaattaatactactttcaccactcccaattcaatata 38589778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 43007896 - 43007938
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| || |||||||||| |||||||||||||    
T  43007896 taactctaattaatattattttcaccactctcaattcaatata 43007938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 44604582 - 44604540
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  44604582 taactctaattaatactactttcatcactctcaactcaatata 44604540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 1643442 - 1643401
Alignment:
Q  194 aactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  1643442 aactctaattaatactactttcccaactttcaatttaatata 1643401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 6505 - 6463
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  6505 taactctaattaatattactttcaccactctcaattcaatata 6463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 14458 - 14500
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  14458 taactctaattaatactactttcatcattttcaattcaatata 14500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 229825 - 229867
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  229825 taactctaattaatactactttcacaacttccaattcaatata 229867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 33018049 - 33018007
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  33018049 taactctaattaatactactttcaccactcccaattcaatata 33018007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 33109369 - 33109417
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||||||||| || | |||||||||||||    
T  33109369 catttataactctaattaatactactttcatcattctcaattcaatata 33109417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 3604705 - 3604663
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  3604705 taactctaattaatattactttcacaacttccaattcaatata 3604663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 6787297 - 6787339
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||    
T  6787297 taactctaattaaaactactttcatcactttcaattaaatata 6787339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 15371968 - 15371926
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  15371968 taacactaattaatactactttcaccactcccaattcaatata 15371926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 31265781 - 31265823
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  31265781 taactctaattaatattactttcacaacttccaattcaatata 31265823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 34803812 - 34803770
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||    
T  34803812 taactataattaatactactttcacaactctcaattcaatata 34803770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 15351483 - 15351446
Alignment:
Q  198 ctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||| || |||||||||||||    
T  15351483 ctaattaatactactttcaccgctctcaattcaatata 15351446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 117087 - 117123
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||| |||| |||||||||||||    
T  117087 taattaatactactttcatcactctcaattcaatata 117123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 1334886 - 1334844
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  1334886 taactctaattaatactactttcaccactcccaattcaatata 1334844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 21296608 - 21296566
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  21296608 taactctaattaatactactttcacaacttccaattcaatata 21296566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 32977895 - 32977853
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  32977895 taactctaattaatactactttcacaactctcaattcaatata 32977853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 43639621 - 43639579
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  43639621 taactctaattaatactactttcacaacttccaattcaatata 43639579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 46194311 - 46194269
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  46194311 taacactaattaatactactttcaccactctcaattcaatata 46194269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 50736103 - 50736145
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  50736103 taactctaattaatactactttcactacttccaattcaatata 50736145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 50776752 - 50776710
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  50776752 taactctaattaatactactttcactacttccaattcaatata 50776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 9218141 - 9218189
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  9218141 catttataactctaattaatactactttcatcactctcaattcattata 9218189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 1923092 - 1923134
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  1923092 taacactaattaatactactttcaccactcccaattcaatata 1923134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 5245414 - 5245456
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||| ||||||| |||| |||||||||||||    
T  5245414 taactctaattaataccactttcatcactctcaattcaatata 5245456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 21585515 - 21585473
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||||||||| |||| |||||||    
T  21585515 taactctaattaatattactttcaccacttccaatacaatata 21585473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 32023206 - 32023164
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||||| |||| |||||||||||||    
T  32023206 taactctaattaatattactttcatcactctcaattcaatata 32023164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 37041978 - 37041936
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || || ||||||||||||    
T  37041978 taactctaattaatactactttcatcatttccaattcaatata 37041936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 39329851 - 39329813
Alignment:
Q  197 tctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  39329851 tctaattaatactactttcatcactctcaattcaatata 39329813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 41607764 - 41607726
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaa 231  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  41607764 taactttaattaatactactttcaacactttcaattcaa 41607726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 47496171 - 47496213
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| | |||||||||||    
T  47496171 taactctaattaatactactttcatcactcttaattcaatata 47496213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 48409586 - 48409624
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaa 231  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  48409586 taactctaattaatactactttcaccactcccaattcaa 48409624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 53051028 - 53051070
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  53051028 taactctaattaatactactttcacaactcccaattcaatata 53051070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 54122329 - 54122287
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||| |||||||||||||| |||| ||||||||||||    
T  54122329 taactctaatcaatactactttcacaacttccaattcaatata 54122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 47684769 - 47684810
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatat 234  Q
    |||||||||||||||||||||||| ||||  |||||||||||    
T  47684769 taactctaattaatactactttcatcactcccaattcaatat 47684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 38600917 - 38600869
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| |||||||||||||||||||||||| ||||  || |||||||||    
T  38600917 catttataactctaattaatactactttcatcactcccagttcaatata 38600869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 41031568 - 41031616
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||| |||||||||||||||||| || || ||||||||||||    
T  41031568 catttataactttaattaatactactttcatcatttccaattcaatata 41031616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 2886173 - 2886215
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  2886173 taacactaattaatactactttcaccactctcaattcaatata 2886215  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 4466260 - 4466218
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  4466260 taactctaattaatactactttcaccacttccaatacaatata 4466218  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 8327719 - 8327761
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  8327719 taactctaattaatactactttcatcactctcaattcaatata 8327761  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 26755978 - 26756020
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  26755978 taactctaattaatactactttcatcattttcaattcaatata 26756020  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 36232895 - 36232853
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  36232895 taactctaattaatactactttcaccatttccaattcaatata 36232853  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 50333937 - 50333979
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  50333937 taactctaattaataatactttcaccactctcaattcaatata 50333979  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 52382492 - 52382450
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  52382492 taactctaattaatattactttcaccactctcaattcaatata 52382450  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 705455 - 705413
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| |||||| |||||| |||||||||||||    
T  705455 taactctaattaatattacttttaccactctcaattcaatata 705413  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 2219554 - 2219512
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||    
T  2219554 taactctaattaatactacgttcacaacttccaattcaatata 2219512  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 2571365 - 2571407
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  2571365 taactctagttaatactactttcatcactctcaattcaatata 2571407  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 3718955 - 3718913
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||| |||| |||| |||||||||||||    
T  3718955 taactctaattaatactaccttcatcactctcaattcaatata 3718913  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 10587687 - 10587645
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  10587687 taacactaattaatactactttcatcactctcaattcaatata 10587645  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 16451633 - 16451675
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||    
T  16451633 taactttaattaatactactttcacaactctcaattcaatata 16451675  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 16460786 - 16460828
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||    
T  16460786 taactttaattaatactactttcacaactctcaattcaatata 16460828  T

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Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 17342830 - 17342872
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  17342830 taactctaattaatactacttttatcactctcaattcaatata 17342872  T

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Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 18186312 - 18186270
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||||||||  ||||||| ||||    
T  18186312 taactctaattaatactactttcaccactcccaattcagtata 18186270  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 24131506 - 24131464
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  24131506 taacactaattaatactactttcaccactcccaattcaatata 24131464  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 27210073 - 27210031
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||  |||||||||| |||||||||||||    
T  27210073 taactctaattaatactcttttcaccactctcaattcaatata 27210031  T

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Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 28277144 - 28277102
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||| ||||||| || |||||||||||||||    
T  28277144 taactctaattaataccactttcatcattttcaattcaatata 28277102  T

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Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 28908095 - 28908137
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||| ||||||||||||| |||| |||||||||||||    
T  28908095 taactctaataaatactactttcatcactatcaattcaatata 28908137  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 29225755 - 29225797
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  29225755 taactctaattaatactactttcatcactcccaattcaatata 29225797  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 29756248 - 29756206
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  29756248 taacactaattaatactactttcaccactcccaattcaatata 29756206  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 33149275 - 33149317
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  33149275 taacactaattaatactactttcatcactctcaattcaatata 33149317  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 37925352 - 37925310
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||| |||||||||| ||||||||||||| |||||||||||||    
T  37925352 taacactaattaatattactttcaccactctcaattcaatata 37925310  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 29225504 - 29225472
Alignment:
Q  203 taatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||| ||||||||||||    
T  29225504 taatactactttcaccacttccaattcaatata 29225472  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 46363511 - 46363475
Alignment:
Q  199 taattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  46363511 taattaatactacttccaccactctcaattcaatata 46363475  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 52146761 - 52146725
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattc 229  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  52146761 taactctaattaatactactttcacaactctcaattc 52146725  T

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Target: scaffold0262 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 12541 - 12499
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||||||||||||||| | | |||||||||||    
T  12541 taactctaattaatactactttcaccattcttaattcaatata 12499  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 230258 - 230300
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  230258 taactctaattaatattactttcacaacttccaattcaatata 230300  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 394780 - 394822
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattcaatata 235  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    
T  394780 taactctaattaatactactttcatcactctcaattcactata 394822  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 9654 - 9617
Alignment:
Q  193 taactctaattaatactactttcaccactttcaattca 230  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  9654 taactctaattaatactactttcatcactctcaattca 9617  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 26609 - 26657
Alignment:
Q  187 catttgtaactctaattaatactactttcaccactttcaattcaatata 235  Q
    ||||| ||| |||||||||||||||||||| ||||  ||||||||||||    
T  26609 catttataattctaattaatactactttcatcactcgcaattcaatata 26657  T

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