View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12060_high_14 (Length: 233)

Name: NF12060_high_14
Description: NF12060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12060_high_14
NF12060_high_14
[»] chr7 (9 HSPs)
chr7 (1-233)||(23844501-23844735)
chr7 (138-233)||(2286463-2286558)
chr7 (138-233)||(496688-496783)
chr7 (138-233)||(25185932-25186027)
chr7 (138-233)||(11765712-11765807)
chr7 (138-229)||(7527267-7527358)
chr7 (154-233)||(42535213-42535292)
chr7 (138-233)||(48057698-48057793)
chr7 (138-233)||(31427259-31427356)
[»] chr4 (2 HSPs)
chr4 (126-233)||(52055147-52055252)
chr4 (139-233)||(1158254-1158348)
[»] chr6 (1 HSPs)
chr6 (138-233)||(33594518-33594613)
[»] chr5 (5 HSPs)
chr5 (138-233)||(25955959-25956054)
chr5 (138-233)||(1501368-1501463)
chr5 (138-233)||(42250121-42250216)
chr5 (138-233)||(38280272-38280367)
chr5 (155-233)||(7886377-7886455)
[»] chr3 (5 HSPs)
chr3 (138-233)||(47940831-47940926)
chr3 (138-233)||(49786398-49786493)
chr3 (145-233)||(8152991-8153079)
chr3 (138-233)||(29836769-29836863)
chr3 (138-233)||(8436895-8436990)
[»] chr8 (2 HSPs)
chr8 (138-233)||(3780358-3780453)
chr8 (139-233)||(4076943-4077037)
[»] chr1 (5 HSPs)
chr1 (138-233)||(20186840-20186935)
chr1 (126-233)||(51787267-51787372)
chr1 (138-233)||(30339641-30339736)
chr1 (138-233)||(43740406-43740501)
chr1 (139-233)||(9672971-9673062)
[»] chr2 (2 HSPs)
chr2 (138-233)||(13922190-13922285)
chr2 (138-231)||(11828962-11829055)


Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 23844501 - 23844735
Alignment:
Q  1 ttggtgtatgaaagctaaagaaaaagttgcaaatattgatttattgatgcgtacatagatagaaaagtgctatttgctatctatttttagacaattttca 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23844501 ttggtgtatgaaagataaagaaaaagttgcaaatattgatttattaatgtgtacatagatagaaaagtgctatttgctatctatttttagacaattttca 23844600  T
Q  101 agatcacatacacacaccactattaaataagagtggtg--tgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacat 198  Q
    ||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  23844601 agatcacatacacacaccattattaaataagagtggtgaccgatacatgcacatccataggtaacatacacactcaaatctccacataaacatgtgacat 23844700  T
Q  199 gtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||| || ||| | ||||||||||||||||||||||    
T  23844701 gtgccctagacctcacaaacactttgtctctcttc 23844735  T

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Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 2286463 - 2286558
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||||||| | || |||  |||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  2286463 gtgatacatgcacacctattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttc 2286558  T

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Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 496688 - 496783
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||||||||||||  |||||||||| ||||||||||| |||||| ||||| ||| || ||| ||||||||||||||||||||||||    
T  496688 gtgatacatgtacatccataggtggcatacacacttaaacctccacataaacatatgacacgtgtcctagaccccacaaacactttgtctctcttc 496783  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 25186027 - 25185932
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||| ||||||||  ||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||| ||||| |||||||||    
T  25186027 gtgatgcatgcacactcataggtgacatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaatactttatctctcttc 25185932  T

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Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 11765712 - 11765807
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||||||||||||  |||||||||| ||||||||||| |||||| ||||| ||| ||  || ||||||||||||||||||||||||    
T  11765712 gtgatacatgtacatccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtccttgaccccacaaacactttgtctctcttc 11765807  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 7527358 - 7527267
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctct 229  Q
    |||||||||||| || ||| |||  |||||||||| |||||||||||||||||| |||||||||||| |||  ||| |||||||||||||||    
T  7527358 gtgatacatgcatattcattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagactccataaacactttgtctct 7527267  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 42535292 - 42535213
Alignment:
Q  154 cataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||| ||||||||||| ||||||||||| |||||| ||||| ||| |  | ||||||||||||||||||||||||||    
T  42535292 cataggtgacatacacacttaaacctccacataaacatgtgacacgtgtcttatatcccacaaacactttgtctctcttc 42535213  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 48057793 - 48057698
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||| ||||||||  |||||| | | |||| |||||| |||||| ||||| ||| || ||| ||||||||||||||||||||||||    
T  48057793 gtgatacatgtacacccataggtggcatacatatttaaacttccacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttc 48057698  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 31427356 - 31427259
Alignment:
Q  138 gtgatacatgcacatccataggtaa--catacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||||||||||||||||    |||||| | | |||||||| || ||| || ||||||||||   |||  |||||||||||||||||||||||    
T  31427356 gtgatacatgcacatccataggtgtggcatacataattaaacctccgcataaatatgtgacatgtggtttagactccacaaacactttgtctctcttc 31427259  T

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Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 52055252 - 52055147
Alignment:
Q  126 aataagagtggtgtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgt 225  Q
    |||||||||||||  |||||||||||| |||||||  |||||||||| ||||||| |||||||||| |||||||||||| ||| ||||||||||||||||    
T  52055252 aataagagtggtg--atacatgcacattcataggtggcatacacacttaaacctctacacaaacatgtgacatgtggcctagaccccacaaacactttgt 52055155  T
Q  226 ctctcttc 233  Q
    ||||||||    
T  52055154 ctctcttc 52055147  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 1158348 - 1158254
Alignment:
Q  139 tgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||||||||||| ||||    | |||||||| |||||||||||||||||| |||||||||||| ||| || ||||||| |||||||||||||    
T  1158348 tgatacatgcacatcgatagaaggcgtacacacttaaacctccacacaaacatgtgacatgtggcctagaccctacaaacattttgtctctcttc 1158254  T

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Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 33594613 - 33594518
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||||||||||||||| |||  |||||||||| |||||| ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||    
T  33594613 gtgatacatgcacatccattggtggcatacacacttaaaccttcacacaaacatgtgacatgtggcctagaccccacaaatactttgtctctcttc 33594518  T

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Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 25956054 - 25955959
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||||||||||  |||||||  |||||||| | |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  25956054 gtgatacatgcacactcataggtggcatacacatttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttc 25955959  T

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Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 1501463 - 1501368
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||||| |||||| |||||||| ||| ||| |||| | |||||||||||||||||    
T  1501463 gtgatacatgcagatccataggtgacatacacacttaaacctccacataaacatatgacatgtagcctagaccccatatacactttgtctctcttc 1501368  T

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Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 42250121 - 42250216
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||||||| |||||  | ||||| ||||| |||||||||||||||||| |||||||||||  ||| ||||||||||||||||||||||||    
T  42250121 gtgatacatgcacacccataaatgacatagacacttaaacctccacacaaacatgtgacatgtggcttagaccccacaaacactttgtctctcttc 42250216  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 38280367 - 38280272
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||||||||||||   ||||||||| ||||||||||| |||||| ||||| ||| || ||| ||||||||||||||||||||||||    
T  38280367 gtgatacatgtacatccataggtggtatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttc 38280272  T

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Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 7886377 - 7886455
Alignment:
Q  155 ataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||||| | | |||||||||||||    
T  7886377 ataggtgacatacacacttaaacctccacacaaacatgtgacatgtggcctaaatcccacatatattttgtctctcttc 7886455  T

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Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 47940831 - 47940926
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||||||| | || |||  |||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  47940831 gtgatacatgcacacctattggtggcatacacacttaaacctccacacaaacatgtgacatgtggcctagaccccacaaacactttgtctctcttc 47940926  T

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Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 49786398 - 49786493
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||| ||||||||  |||||||||| ||||||||||| |||||| ||||| ||| || ||| ||||||||||||||||||||||||    
T  49786398 gtgatacatgtacacccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttc 49786493  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 8152991 - 8153079
Alignment:
Q  145 atgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||| | ||||||  |||||||||  ||||||||||| |||||| |||||||||||| |||  |||||||||||||||||||||||    
T  8152991 atgcacacctataggtggcatacacacctaaacctccacataaacatgtgacatgtggcctagactccacaaacactttgtctctcttc 8153079  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 29836863 - 29836769
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||||||||||  |||||||  |||||||||| ||||||||||||||| || | |||| || || | | |||||||| |||||||||||||||    
T  29836863 gtgatacatgcacactcataggtggcatacacacttaaacctccacacaaatatgtaacatatgacctacaccccacaaa-actttgtctctcttc 29836769  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 8436990 - 8436895
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||| ||| ||| ||||||||  |||||||| | ||||||| ||| ||| || ||||| ||| |  ||| ||||||||||||||||||||||||    
T  8436990 gtgatatatgtacacccataggtggcatacacatttaaacctctacataaatatatgacacgtgtcttagaccccacaaacactttgtctctcttc 8436895  T

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Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 3780453 - 3780358
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||| | | || | |||||||||||||||||||    
T  3780453 gtgatacatgtacatccataggtggcatacacactcaaacctccacacaaacatgtgacatgtagcctaaacccgagaaacactttgtctctcttc 3780358  T

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Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 4077037 - 4076943
Alignment:
Q  139 tgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||||||| | ||||||||  |||||||||| |||||||||||||||||| |||||||| ||| ||| |||||||||| |||||||||||||    
T  4077037 tgatacatgcatacccataggtggcatacacacttaaacctccacacaaacatgtgacatgtagcctagaccccacaaacaatttgtctctcttc 4076943  T

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Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 20186935 - 20186840
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||| ||||||||  |||||||||| ||||||||||| |||||| ||||| ||| || ||||||||||||||||||||||||||||    
T  20186935 gtgatacatgtacacccataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagatcccacaaacactttgtctctcttc 20186840  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 51787267 - 51787372
Alignment:
Q  126 aataagagtggtgtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgt 225  Q
    |||||||||||||  ||||||| ||||||||||||  |||||||||| |||||| |||| |||||| ||||| |||  | ||| ||||||||||||||||    
T  51787267 aataagagtggtg--atacatgtacatccataggtggcatacacacttaaaccttcacataaacatgtgacacgtgctctagaccccacaaacactttgt 51787364  T
Q  226 ctctcttc 233  Q
    ||||||||    
T  51787365 ctctcttc 51787372  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 30339641 - 30339736
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||| ||||||||  |||||||||| ||||||| ||| |||||| ||||| ||| || ||| ||||||||||||||||||||||||    
T  30339641 gtgatacatgtacacccataggtggcatacacacttaaacctctacataaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttc 30339736  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 43740501 - 43740406
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||| |||| |||||||||| | |||| |||||| |||||||||||||||||| ||| |||||||| | | | ||||||||||||||||||||||    
T  43740501 gtgatccatgaacatccatagatcacatgcacacttaaacctccacacaaacatgtgatatgtggcctaaacctcacaaacactttgtctctcttc 43740406  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 9673062 - 9672971
Alignment:
Q  139 tgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    ||||||||| ||| | ||||||  |||||||||| ||||||||||| |||||| ||||| ||| || |||| ||||||||||  |||||||||||    
T  9673062 tgatacatgtacacctataggtggcatacacacttaaacctccacataaacatgtgacacgtgtcctagat-ccacaaacac--tgtctctcttc 9672971  T

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Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 13922190 - 13922285
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctcttc 233  Q
    |||||||||| ||||||||||||  |||||||||| ||||||||||  |||||| ||||| ||| || ||| ||||||||||||||||||||||||    
T  13922190 gtgatacatgtacatccataggtggcatacacacttaaacctccacgtaaacatgtgacacgtgtcctagaccccacaaacactttgtctctcttc 13922285  T

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Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 11828962 - 11829055
Alignment:
Q  138 gtgatacatgcacatccataggtaacatacacactcaaacctccacacaaacatttgacatgtggccgagatcccacaaacactttgtctctct 231  Q
    |||| |||||||||  |||||||  |||||||||| ||||||||||| ||| || ||||||||| || ||| ||||||||||||||| ||||||    
T  11828962 gtgagacatgcacactcataggtggcatacacacttaaacctccacataaatatgtgacatgtgtcctagaccccacaaacactttgcctctct 11829055  T

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