View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12060_high_7 (Length: 387)

Name: NF12060_high_7
Description: NF12060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12060_high_7
NF12060_high_7
[»] chr3 (36 HSPs)
chr3 (8-254)||(26310540-26310800)
chr3 (298-387)||(26310839-26310928)
chr3 (298-387)||(26307755-26307844)
chr3 (132-239)||(26307591-26307699)
chr3 (15-75)||(28529272-28529332)
chr3 (15-69)||(20791321-20791375)
chr3 (15-99)||(24734699-24734784)
chr3 (15-68)||(46237147-46237200)
chr3 (11-75)||(15790466-15790530)
chr3 (15-75)||(20493546-20493606)
chr3 (25-68)||(10769748-10769791)
chr3 (15-69)||(14236044-14236098)
chr3 (15-96)||(41451996-41452078)
chr3 (11-64)||(138793-138846)
chr3 (15-68)||(37600231-37600284)
chr3 (15-68)||(43657097-43657150)
chr3 (15-68)||(54140994-54141047)
chr3 (15-75)||(5452161-5452221)
chr3 (15-75)||(7640696-7640756)
chr3 (11-51)||(18722537-18722577)
chr3 (15-75)||(27243064-27243124)
chr3 (15-75)||(37776804-37776864)
chr3 (15-75)||(50661623-50661683)
chr3 (11-75)||(52124053-52124117)
chr3 (25-64)||(357874-357913)
chr3 (11-46)||(18427247-18427282)
chr3 (25-68)||(24748933-24748976)
chr3 (15-49)||(9774210-9774244)
chr3 (25-75)||(45515606-45515656)
chr3 (10-64)||(46450095-46450149)
chr3 (15-56)||(19345101-19345142)
chr3 (8-73)||(46575969-46576034)
chr3 (11-75)||(8825076-8825140)
chr3 (11-47)||(13809128-13809164)
chr3 (28-64)||(46160977-46161013)
chr3 (11-75)||(49720099-49720163)
[»] chr7 (30 HSPs)
chr7 (11-79)||(11824086-11824154)
chr7 (15-79)||(22189954-22190018)
chr7 (15-78)||(7775016-7775079)
chr7 (8-75)||(14795150-14795217)
chr7 (8-75)||(15242142-15242209)
chr7 (25-75)||(44511047-44511097)
chr7 (11-101)||(31502561-31502652)
chr7 (16-75)||(19422936-19422995)
chr7 (11-79)||(6442180-6442248)
chr7 (15-79)||(8073389-8073453)
chr7 (20-64)||(31874061-31874105)
chr7 (15-75)||(33008123-33008183)
chr7 (15-81)||(32178904-32178968)
chr7 (28-81)||(4090091-4090144)
chr7 (15-68)||(17354628-17354681)
chr7 (15-68)||(22786177-22786230)
chr7 (24-81)||(27320238-27320295)
chr7 (25-68)||(31959968-31960011)
chr7 (11-99)||(32205073-32205159)
chr7 (31-70)||(49160366-49160405)
chr7 (15-69)||(17749719-17749773)
chr7 (15-69)||(24539224-24539278)
chr7 (15-65)||(26703541-26703591)
chr7 (25-75)||(32212980-32213030)
chr7 (25-59)||(41508386-41508420)
chr7 (15-68)||(13919806-13919859)
chr7 (15-75)||(12271005-12271065)
chr7 (15-63)||(19494440-19494488)
chr7 (28-68)||(19840908-19840948)
chr7 (11-75)||(27949292-27949356)
[»] chr6 (20 HSPs)
chr6 (15-96)||(445815-445897)
chr6 (15-79)||(34905351-34905415)
chr6 (15-75)||(5106317-5106377)
chr6 (11-75)||(32122814-32122878)
chr6 (25-71)||(373513-373559)
chr6 (15-69)||(21987317-21987371)
chr6 (9-70)||(4595766-4595827)
chr6 (30-79)||(8441953-8442002)
chr6 (30-79)||(8450757-8450806)
chr6 (15-68)||(19090316-19090369)
chr6 (11-75)||(2931580-2931644)
chr6 (15-75)||(10133259-10133319)
chr6 (11-71)||(12327302-12327362)
chr6 (15-75)||(35128824-35128884)
chr6 (18-81)||(373412-373475)
chr6 (17-67)||(6531401-6531451)
chr6 (25-71)||(9940381-9940427)
chr6 (11-65)||(17144768-17144822)
chr6 (17-75)||(31116227-31116285)
chr6 (27-75)||(12690271-12690319)
[»] chr4 (32 HSPs)
chr4 (15-79)||(722172-722236)
chr4 (11-75)||(39016682-39016746)
chr4 (17-75)||(8108975-8109033)
chr4 (25-75)||(50571883-50571933)
chr4 (15-68)||(42862522-42862575)
chr4 (15-75)||(754681-754741)
chr4 (15-75)||(43771145-43771205)
chr4 (15-75)||(47237842-47237902)
chr4 (11-75)||(50164414-50164478)
chr4 (20-75)||(20454559-20454614)
chr4 (16-75)||(40991691-40991750)
chr4 (11-62)||(52671862-52671913)
chr4 (11-69)||(24834603-24834661)
chr4 (11-53)||(31250980-31251022)
chr4 (15-81)||(34129501-34129567)
chr4 (15-68)||(30867033-30867086)
chr4 (26-79)||(47009204-47009257)
chr4 (11-75)||(33653586-33653650)
chr4 (28-76)||(40812055-40812103)
chr4 (25-68)||(51206157-51206200)
chr4 (25-71)||(16178697-16178743)
chr4 (25-75)||(39016777-39016827)
chr4 (11-61)||(44832496-44832546)
chr4 (32-77)||(52995921-52995967)
chr4 (9-46)||(4138913-4138950)
chr4 (11-56)||(24938512-24938557)
chr4 (9-70)||(40977574-40977635)
chr4 (15-51)||(18421930-18421966)
chr4 (8-64)||(20225435-20225491)
chr4 (15-75)||(22592323-22592383)
chr4 (11-75)||(43958170-43958234)
chr4 (25-73)||(49682902-49682950)
[»] chr2 (30 HSPs)
chr2 (15-75)||(45554586-45554646)
chr2 (15-101)||(9470073-9470160)
chr2 (15-75)||(26767862-26767922)
chr2 (15-67)||(4964774-4964826)
chr2 (29-81)||(6980235-6980287)
chr2 (15-68)||(28898138-28898191)
chr2 (15-68)||(42182915-42182968)
chr2 (25-81)||(38464176-38464232)
chr2 (28-79)||(11539438-11539489)
chr2 (8-75)||(15508933-15509000)
chr2 (12-75)||(16719528-16719591)
chr2 (16-74)||(37652347-37652405)
chr2 (15-68)||(1107064-1107117)
chr2 (19-75)||(3804603-3804659)
chr2 (15-75)||(12989210-12989270)
chr2 (11-75)||(18511306-18511370)
chr2 (25-65)||(37398840-37398880)
chr2 (15-75)||(43400152-43400212)
chr2 (11-55)||(43414394-43414438)
chr2 (25-68)||(37228613-37228656)
chr2 (25-68)||(37719860-37719903)
chr2 (17-63)||(2476565-2476611)
chr2 (25-79)||(25666704-25666758)
chr2 (25-67)||(28898061-28898103)
chr2 (15-53)||(30849278-30849316)
chr2 (15-81)||(32701483-32701549)
chr2 (26-67)||(17188092-17188133)
chr2 (15-75)||(10339785-10339845)
chr2 (15-75)||(10981537-10981597)
chr2 (13-69)||(11775857-11775913)
[»] chr8 (28 HSPs)
chr8 (15-81)||(32072110-32072176)
chr8 (15-68)||(35689506-35689559)
chr8 (15-79)||(8903867-8903931)
chr8 (15-75)||(9952858-9952918)
chr8 (15-75)||(28413970-28414030)
chr8 (11-70)||(17741624-17741683)
chr8 (11-69)||(13407421-13407479)
chr8 (11-96)||(35151826-35151912)
chr8 (25-76)||(7599533-7599584)
chr8 (15-100)||(34861288-34861372)
chr8 (15-98)||(1977274-1977358)
chr8 (11-71)||(17499330-17499390)
chr8 (15-69)||(23685156-23685210)
chr8 (15-65)||(39023459-39023509)
chr8 (11-64)||(6387591-6387644)
chr8 (30-75)||(7493463-7493508)
chr8 (11-72)||(28211983-28212044)
chr8 (11-78)||(10868009-10868074)
chr8 (28-68)||(23142937-23142977)
chr8 (11-71)||(36804936-36804996)
chr8 (15-66)||(1961310-1961361)
chr8 (25-72)||(13856506-13856553)
chr8 (11-65)||(5726344-5726398)
chr8 (26-68)||(35689595-35689637)
chr8 (25-79)||(36629674-36629728)
chr8 (15-69)||(45246459-45246513)
chr8 (15-75)||(5979899-5979959)
chr8 (8-76)||(34613063-34613131)
[»] scaffold0543 (1 HSPs)
scaffold0543 (11-71)||(9687-9747)
[»] scaffold0492 (1 HSPs)
scaffold0492 (11-71)||(11233-11293)
[»] chr1 (34 HSPs)
chr1 (8-75)||(44271937-44272004)
chr1 (15-75)||(14094102-14094162)
chr1 (15-75)||(18157057-18157117)
chr1 (11-75)||(26980359-26980423)
chr1 (15-69)||(15523235-15523289)
chr1 (15-69)||(15531229-15531283)
chr1 (15-69)||(19101702-19101756)
chr1 (15-69)||(22540393-22540447)
chr1 (14-75)||(6133724-6133785)
chr1 (15-68)||(11135765-11135818)
chr1 (15-99)||(25543334-25543419)
chr1 (26-75)||(37553061-37553110)
chr1 (15-79)||(28218149-28218213)
chr1 (15-75)||(32848684-32848744)
chr1 (25-67)||(13388361-13388403)
chr1 (15-64)||(2225254-2225303)
chr1 (15-68)||(11430467-11430520)
chr1 (11-68)||(28109894-28109951)
chr1 (15-64)||(41918025-41918074)
chr1 (11-64)||(41958113-41958166)
chr1 (15-75)||(14341022-14341082)
chr1 (11-71)||(29673498-29673558)
chr1 (20-71)||(32211890-32211941)
chr1 (25-68)||(41095632-41095675)
chr1 (25-67)||(11135853-11135895)
chr1 (29-75)||(39039470-39039516)
chr1 (18-68)||(41095713-41095763)
chr1 (15-64)||(4578678-4578727)
chr1 (25-69)||(21466682-21466726)
chr1 (8-64)||(24911493-24911549)
chr1 (11-51)||(33193093-33193133)
chr1 (25-65)||(36566925-36566965)
chr1 (15-75)||(44739137-44739197)
chr1 (11-51)||(50308844-50308884)
[»] chr5 (18 HSPs)
chr5 (15-75)||(28490823-28490883)
chr5 (8-75)||(17537196-17537263)
chr5 (11-59)||(4877850-4877898)
chr5 (11-77)||(10950103-10950169)
chr5 (15-69)||(27592553-27592607)
chr5 (15-69)||(30325975-30326029)
chr5 (15-79)||(10142077-10142139)
chr5 (15-68)||(40971554-40971607)
chr5 (15-68)||(42224692-42224745)
chr5 (9-61)||(28155795-28155847)
chr5 (25-65)||(32050421-32050461)
chr5 (11-79)||(37455364-37455432)
chr5 (25-75)||(1649569-1649619)
chr5 (25-79)||(2525589-2525643)
chr5 (15-75)||(36494242-36494303)
chr5 (15-47)||(5413838-5413870)
chr5 (15-71)||(28434917-28434973)
chr5 (15-75)||(32309499-32309559)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-75)||(296855-296915)


Alignment Details
Target: chr3 (Bit Score: 182; Significance: 3e-98; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 26310540 - 26310800
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaatatgctagtattcctcttttagtatct 107  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||    
T  26310540 caaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagagagagtgttgaaaagtgaatgtgctgatattcctcttttagtatct 26310639  T
Q  108 gacgactactagaagaagaaacca--------------gcagcttacatatcacatgttactaaatccaataataaaaaacaaagccaccatgggccact 193  Q
    ||||||||||||||||||||| ||              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26310640 gacgactactagaagaagaaaacaccataagtatatttgcagcttacatatcacatgttactaaatccaataataaaaaacaaagccaccatgggccact 26310739  T
Q  194 tggttgtgaggcatactgcacctcattatactcgcacacaataattaatcccaattatcat 254  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26310740 tggttctgaggcatactgcacctcattatactcgcacacaataattaatcccaattatcat 26310800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 26310839 - 26310928
Alignment:
Q  298 ttaggatattttgtttcatattaagccaaatatgagtgcgacagtttggtgcatttgtaaaagtactcaatatggtttcatatattcttc 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26310839 ttaggatattttgtttcatattaagccaaatatgagtgcgacagtttggtgcatttgtaaaagtactcaatatggtttcatatattcttc 26310928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 26307755 - 26307844
Alignment:
Q  298 ttaggatattttgtttcatattaagccaaatatgagtgcgacagtttggtgcatttgtaaaagtactcaatatggtttcatatattcttc 387  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26307755 ttaggatatttcgtttcatattaagccaaatatgagtgcgacagtttggtgcatttgtaaaagtactcaatatggtttcatatcttcttc 26307844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 26307591 - 26307699
Alignment:
Q  132 gcagcttacatatcacatgttactaaatccaataataaaaaacaaagccaccatgggccacttggttgtgaggca-tactgcacctcattatactcgcac 230  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||| |||||| |||||||||    
T  26307591 gcagcttacatatcacatgttactaaatccaatactaaaaaacaaagccaccatgggccacttggttctgaggcattcctgcatctcattgtactcgcac 26307690  T
Q  231 acaataatt 239  Q
    |||||||||    
T  26307691 acaataatt 26307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 28529332 - 28529272
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  28529332 tggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaa 28529272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 20791375 - 20791321
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  20791375 tggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 20791321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 24734784 - 24734699
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat-atgctagtattcctcttt 99  Q
    ||||||||| ||| ||||||||||||||||||| ||| ||| |||||||  |||||||||| ||| |  |||||||||||||||||    
T  24734784 tggtgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctcttt 24734699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 46237147 - 46237200
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||||||||||||| ||| | ||||||||||||||    
T  46237147 tggtgggacatacattgatttcatccaataaaagagtgattgctagagagagtg 46237200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 15790466 - 15790530
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||| ||||||||||| |||||||||| ||||||||| |||| | |||||||||||    
T  15790466 aaaatggtgagacatacattgattttatccaataaataagtaagtgttagaaaaagtgttgaaaa 15790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 20493546 - 20493606
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||| |||| ||||||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  20493546 tggtaggacatacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaa 20493606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 10769791 - 10769748
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  10769791 tacattgatttcatcaaataaaagagtaagtgctagagagagtg 10769748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 14236098 - 14236044
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| || |||||||||||||||||||| ||| ||||||| |||||||||    
T  14236098 tggtgggacatatattgatttcatccaataaaatagtgagtgctaaagagagtgt 14236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 41451996 - 41452078
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat-atgctagtattcctc 96  Q
    ||||||||| ||| ||||||||||||||||||| ||| ||| |||||||  |||||||||| ||| |  ||||||||||||||    
T  41451996 tggtgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctc 41452078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 138846 - 138793
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||| ||| |||||||||||||| |||||||| ||| ||||||||||||    
T  138846 aaaatggtgagacatacattgatttcattcaataaaagagtgagtgctagagag 138793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 37600231 - 37600284
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| |||  |||||||||||||||    
T  37600231 tggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtg 37600284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 43657097 - 43657150
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||||| ||||||| ||| ||||||||||| ||||    
T  43657097 tggtgggacatacattgatttcatcaaataaaatagtgagtgctagagaaagtg 43657150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 54140994 - 54141047
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||  ||| ||||||||||||||||    
T  54140994 tggtgggacatacattgatttcacccaataaatgagtgagtgctagagagagtg 54141047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 5452161 - 5452221
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||  ||||||||||||||||||||||| ||| | || || |||||||||||||||    
T  5452161 tggtgggaaatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaa 5452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 7640696 - 7640756
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||| |||| |||||| |||||||||||||| |||| ||||| ||||| ||||||||||||    
T  7640696 tggtaggacatacattaatttcatccaataagaaagcaagtgttagagtgagtgttgaaaa 7640756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 18722537 - 18722577
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagt 51  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  18722537 aaaatggtgggacatacattgatttcatccaataaataagt 18722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 27243124 - 27243064
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| | ||||||||| ||||||||||| ||| |||| ||||||||||||| ||||    
T  27243124 tggtgggacatgcattgattttatccaataaaagagtgagtgttagagagagtgttcaaaa 27243064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 37776804 - 37776864
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||| |||| ||||||||||||||| ||||||| ||| |||||| |||| |||||||||||    
T  37776804 tggtaggacatacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaa 37776864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 50661623 - 50661683
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| | ||||||||| ||| ||||||| |||||||| ||||||||||||| ||||    
T  50661623 tggtgggacatgcattgattttatctaataaaagagtaagtgttagagagagtgtttaaaa 50661683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 52124053 - 52124117
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||| ||||||| |||||| ||||||||||| ||| |||| |||||||||||||| ||| ||||    
T  52124053 aaaatagtgggacatacattaatttcatccaacaaataagtgagtgctagagagagcgttaaaaa 52124117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 357874 - 357913
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  357874 tacattgatttcatccaataaaaaagtgagtgatagagag 357913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 18427247 - 18427282
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaa 46  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18427247 aaaatggtgggacatacattgatttcatccaataaa 18427282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 24748976 - 24748933
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||    
T  24748976 tacattgatttcatccaataaaagagtgagtgttagagagagtg 24748933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 9774244 - 9774210
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaa 49  Q
    |||||||||||||||| ||||||||||||||||||    
T  9774244 tggtgggacgtacattaatttcatccaataaaaaa 9774210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 45515606 - 45515656
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||||||||||||| ||| |||| | ||||||||||| ||||    
T  45515606 tacattgatttcatccaataaaatagtgagtgttggagagagtgttaaaaa 45515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 46450149 - 46450095
Alignment:
Q  10 aaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    |||| ||||||||| |||||||||| |||| ||||||| ||| ||||||||||||    
T  46450149 aaaagtggtgggacatacattgattccatctaataaaagagtgagtgctagagag 46450095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 19345101 - 19345142
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtg 56  Q
    ||||||||| |||||||||||||||||||||| || ||||||    
T  19345101 tggtgggacatacattgatttcatccaataaataaataagtg 19345142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 46576034 - 46575969
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaa 73  Q
    |||||| ||||||||| ||||||| ||||| ||||||| | ||| |||| | ||||||||||||||    
T  46576034 caaaaagtggtgggacatacattggtttcagccaataagagagtgagtgtttgagagagtgttgaa 46575969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 8825076 - 8825140
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| || |||||||||||| |||||||  || ||| |||||||||  ||||||||    
T  8825076 aaaatggtgggacatatattgatttcatctaataaaagggtgagtactagagagatggttgaaaa 8825140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 13809164 - 13809128
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaa 47  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  13809164 aaaatggtgggacatacattgattttatccaataaaa 13809128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 46161013 - 46160977
Alignment:
Q  28 attgatttcatccaataaaaaagtaagtgctagagag 64  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  46161013 attgatttcatccaataaaagagtgagtgctagagag 46160977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 49720099 - 49720163
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||  |||||| |||| |||||||||  |||| |||| | ||||||||||||||||    
T  49720099 aaaatggtgggatatacattcatttaatccaataagcaagtgagtgtttgagagagtgttgaaaa 49720163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 11824154 - 11824086
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  11824154 aaaatggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagcgttgaaaaatga 11824086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 22190018 - 22189954
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  22190018 tggtgggccatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatga 22189954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 7775079 - 7775016
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatg 78  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  7775079 tggtgggacatacattgatttcatccaataaaagagtgagtgctatagagagtgttgaaaaatg 7775016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 14795217 - 14795150
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  14795217 caaaaattggtgggacatacattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaa 14795150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 15242209 - 15242142
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  15242209 caaaaattggtgggacatacattgatttcatccaataaaaaagtgactgatagagagagtgttgaaaa 15242142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 44511047 - 44511097
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44511047 tacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaa 44511097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 31502561 - 31502652
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat-atgctagtattcctctttta 101  Q
    ||||||||||||| ||| ||||||||||||||||||| ||| |||| |||||||| ||||||||| ||| |  |||||| ||||||||||||    
T  31502561 aaaatggtgggacataccttgatttcatccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctctttta 31502652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 19422936 - 19422995
Alignment:
Q  16 ggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||| ||||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  19422936 ggtgggacatacattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaa 19422995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 6442248 - 6442180
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||| || |||||||||||||| |||||||  | | |||| ||||||||||||||||||||||    
T  6442248 aaaatggtggaacatacattgatttcatacaataaatgactgagtgatagagagagtgttgaaaaatga 6442180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 8073389 - 8073453
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||||| |||||||||||||||| |||||| ||| ||||||||  ||| |||||||||||||    
T  8073389 tggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatga 8073453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 31874105 - 31874061
Alignment:
Q  20 ggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  31874105 ggacatacattgatttcatccaataaaaaagtgagtgctagagag 31874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 33008183 - 33008123
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||| |||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  33008183 tggtgggacatacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaa 33008123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 32178904 - 32178968
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    |||||| || |||||| |||||||||||||||| ||||||||||  ||||||||||||||| |||||    
T  32178904 tggtggaacatacattaatttcatccaataaaatagtaagtgct--agagagtgttgaaaagtgaat 32178968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 4090091 - 4090144
Alignment:
Q  28 attgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    |||||||||||||||||||||| |||||| || ||||| |||||||||| ||||    
T  4090091 attgatttcatccaataaaaaaataagtgttaaagagaatgttgaaaaaagaat 4090144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 17354628 - 17354681
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||||||||||||| | | |||| |||||||||||    
T  17354628 tggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtg 17354681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 22786230 - 22786177
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||| ||| ||||||||||||| | ||||||||||| ||||||||||||||||    
T  22786230 tggtgagacatacattgatttcacctaataaaaaagtgagtgctagagagagtg 22786177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 27320295 - 27320238
Alignment:
Q  24 gtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    |||||||||||| || |||||||| ||| |||| | ||||||||||||||||||||||    
T  27320295 gtacattgattttattcaataaaagagtgagtgttggagagagtgttgaaaaatgaat 27320238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 31959968 - 31960011
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||    
T  31959968 tacattaatttcatccaataaataagtgagtgctagagagagtg 31960011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 32205159 - 32205073
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat-atgctagtattcctcttt 99  Q
    |||||||| |||| ||||||||||||||||||||||| ||| ||   ||||||||||||| |||| ||| |  |||||| ||||||||||    
T  32205159 aaaatggtaggacatacattgatttcatccaataaaagagtgag---tagagagagtgttcaaaagtgagtgttgctagcattcctcttt 32205073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 49160366 - 49160405
Alignment:
Q  31 gatttcatccaataaaaaagtaagtgctagagagagtgtt 70  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  49160366 gatttcatccaataataaagtaagtgttagagagagtgtt 49160405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 17749773 - 17749719
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| || |||||||| ||||||||||| ||| |||| ||||||||||||    
T  17749773 tggtgggacatatattgattttatccaataaaagagtgagtgttagagagagtgt 17749719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 24539224 - 24539278
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| || |||||||| ||||||||||| ||| |||| ||||||||||||    
T  24539224 tggtgggacatatattgattttatccaataaaagagtgagtgttagagagagtgt 24539278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 26703541 - 26703591
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    ||||| ||| ||||||||||||| ||||||||| ||| |||||||||||||    
T  26703541 tggtgagacatacattgatttcacccaataaaagagtgagtgctagagaga 26703591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 32212980 - 32213030
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||||||||||||| |   |||||||||||||||||| ||||    
T  32212980 tacattgatttcatccaataaaagatagagtgctagagagagtgttaaaaa 32213030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 41508386 - 41508420
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgcta 59  Q
    ||||||||||||||||||||||||||| |||||||    
T  41508386 tacattgatttcatccaataaaaaagtgagtgcta 41508420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 13919859 - 13919806
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||  ||  ||||||||||||||||    
T  13919859 tggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtg 13919806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 12271065 - 12271005
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||||||||||||||  |||||| |||   ||||| |||||||||||||||    
T  12271065 tggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaa 12271005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 19494440 - 19494488
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagaga 63  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||| |||||||    
T  19494440 tggtgggacatacattgatttcacccaataaaagagtgagtactagaga 19494488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 19840948 - 19840908
Alignment:
Q  28 attgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    |||||||||| ||||||||| ||| ||||||||||||||||    
T  19840948 attgatttcacccaataaaagagtgagtgctagagagagtg 19840908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 27949356 - 27949292
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||| |||| ||  |||||||||||||||| || ||| |||| ||||||||||||| ||||    
T  27949356 aaaatggtaggacataacttgatttcatccaatacaagagtgagtgttagagagagtgttaaaaa 27949292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 445897 - 445815
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaata-tgctagtattcctc 96  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||| |||||||    
T  445897 tggtgtgacatacattgatttcatccaataaaaaagtgagtgctagagatagtgttgaaaaatgagtattgctagcattcctc 445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 34905415 - 34905351
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  34905415 tggtgggacatacattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatga 34905351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 5106377 - 5106317
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||| ||||||||||||||| |||| |||||| |||||||||||    
T  5106377 tggtgggacatacattgattttatccaataaaaaagtgagtgttagagaaagtgttgaaaa 5106317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 32122878 - 32122814
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| || ||||||||||||||||||| |||| |||| | || |||||||||||||    
T  32122878 aaaatggtgggacatatattgatttcatccaataaataagtgagtggtggaaagagtgttgaaaa 32122814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 373513 - 373559
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  373513 tacattgattttatccaataaaatagtaagtgttagagagagtgttg 373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 21987371 - 21987317
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||  ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  21987371 tggtgggatatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 21987317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 4595827 - 4595766
Alignment:
Q  9 aaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgtt 70  Q
    ||||| ||||| ||| |||||||||||||  |||||||| ||| ||||||||||||||||||    
T  4595827 aaaaagtggtgagacatacattgatttcactcaataaaagagtgagtgctagagagagtgtt 4595766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 8441953 - 8442002
Alignment:
Q  30 tgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||||||||||  ||| |||| ||||||||||||||||||||||    
T  8441953 tgatttcatccaataaatgagtgagtgttagagagagtgttgaaaaatga 8442002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 8450757 - 8450806
Alignment:
Q  30 tgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||||||||||  ||| |||| ||||||||||||||||||||||    
T  8450757 tgatttcatccaataaatgagtgagtgttagagagagtgttgaaaaatga 8450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 19090316 - 19090369
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| |||  |||||||||||||||    
T  19090316 tggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtg 19090369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 2931644 - 2931580
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||| |||| ||||||||||||||| |||||| |||  | || ||||||||||||||||||    
T  2931644 aaaatggtaggacatacattgatttcatcaaataaataagcgaatgatagagagagtgttgaaaa 2931580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 10133259 - 10133319
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||| | |||||||||||||||  ||| |||| ||||||||||||||||||    
T  10133259 tggtgggacatacaataatttcatccaataaatgagtgagtgttagagagagtgttgaaaa 10133319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 12327302 - 12327362
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    |||||||| |||| ||||||||||  ||||||||||| ||| | |||||||||||||||||    
T  12327302 aaaatggtaggacatacattgattctatccaataaaagagtgactgctagagagagtgttg 12327362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 35128824 - 35128884
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||| | ||||||||| ||| | |||||||||||||||| ||||    
T  35128824 tggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgttcaaaa 35128884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 373475 - 373412
Alignment:
Q  18 tgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    |||||| ||||||||||| | |||||||||||||  ||||||||||||||| | ||||| ||||    
T  373475 tgggacatacattgattttacccaataaaaaagtgggtgctagagagagtgctcaaaaaagaat 373412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 6531401 - 6531451
Alignment:
Q  17 gtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagt 67  Q
    ||||||| ||||||||||||| ||||||||| ||| |||||| ||||||||    
T  6531401 gtgggacatacattgatttcacccaataaaagagtgagtgctggagagagt 6531451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 9940427 - 9940381
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||| ||||||||| ||| ||||||||||||| |||||    
T  9940427 tacattgatttcacccaataaaagagtgagtgctagagagaatgttg 9940381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 17144768 - 17144822
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    |||| ||||| || || ||||||||||| |||||||| |||||||||||||||||    
T  17144768 aaaacggtggaacatatattgatttcattcaataaaatagtaagtgctagagaga 17144822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 31116227 - 31116285
Alignment:
Q  17 gtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||| |||||||||||||||||||| || ||| | || ||||||||||||| ||||    
T  31116227 gtgggacatacattgatttcatccaatagaagagtgaatgttagagagagtgttcaaaa 31116285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 12690319 - 12690271
Alignment:
Q  27 cattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||| |||||||||||||||| || ||||| ||||||||||||| ||||    
T  12690319 cattaatttcatccaataaaagagcaagtgttagagagagtgtttaaaa 12690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 722236 - 722172
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  722236 tggtgggacatactttgatttcatccaataaaaaagtgagtgctagagagagtgttgaaagatga 722172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 39016746 - 39016682
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||| ||||    
T  39016746 aaaatggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaa 39016682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 8109033 - 8108975
Alignment:
Q  17 gtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  8109033 gtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaa 8108975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 50571933 - 50571883
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  50571933 tacattgatttcatctaataaaagagtaagtgctagagagagtgttgaaaa 50571883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 42862522 - 42862575
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||    
T  42862522 tggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtg 42862575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 754681 - 754741
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||| |||| |||||||||||||||||| |||| |||||| |||||||||||    
T  754681 tggtgggacatactttgagttcatccaataaaaaagtgagtgttagagaaagtgttgaaaa 754741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 43771205 - 43771145
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||||||||||||| ||| |||  ||||||||||||| ||||    
T  43771205 tggtgggacatacattgatttcatccaataaaagagtgagtcatagagagagtgttcaaaa 43771145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 47237842 - 47237902
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| || |||||||||||||||||||| ||| | |||||||||||||||| ||||    
T  47237842 tggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaa 47237902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 50164478 - 50164414
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||  ||||||||||| ||||||||||  ||| |||||||||||||||||| ||||    
T  50164478 aaaatggtgggagatacattgattttatccaataaatgagtgagtgctagagagagtgttaaaaa 50164414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 20454614 - 20454559
Alignment:
Q  20 ggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||| ||||||||||| ||| ||||||| ||| |||||||||||||||||||||||    
T  20454614 ggacatacattgattttatctaataaaagagtgagtgctagagagagtgttgaaaa 20454559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 40991691 - 40991750
Alignment:
Q  16 ggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||| || |||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  40991691 ggtgggacatatattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaa 40991750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 52671913 - 52671862
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagag 62  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||| ||||||    
T  52671913 aaaatggtgggacatacatttatttcatccaataaaaaagtgagtactagag 52671862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 24834661 - 24834603
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||||||| |||||||||| ||||||||||||| || || | ||||||||||||    
T  24834661 aaaatggtgggacatacattgattccatccaataaaaatgtgagcgttagagagagtgt 24834603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 31250980 - 31251022
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaa 53  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  31250980 aaaatggtgggacatacattgatttcatccaataaataagtaa 31251022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 34129501 - 34129567
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    ||||||||  ||||||||| |||||||||| || ||| ||||||||||||||| ||||||| |||||    
T  34129501 tggtgggatatacattgatctcatccaatagaagagtgagtgctagagagagttttgaaaagtgaat 34129567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 30867033 - 30867086
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| |||||| |||| ||||||||||||||| ||||||||||| ||||    
T  30867033 tggtgggacatacattaatttaatccaataaaaaagtgagtgctagagatagtg 30867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 47009257 - 47009204
Alignment:
Q  26 acattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||| |||| ||||||||||| ||| ||||||||| |||||||||||||||||    
T  47009257 acattaattttatccaataaaagagtgagtgctagaaagagtgttgaaaaatga 47009204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 33653586 - 33653650
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| ||||||||||||||| ||||||  ||| | |  ||||||||||||||||||    
T  33653586 aaaatggtgggacatacattgatttcatcaaataaatgagtgattaatagagagagtgttgaaaa 33653650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 40812103 - 40812055
Alignment:
Q  28 attgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaa 76  Q
    |||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  40812103 attgatttcacccaataaaagagtgagtgctagagagagtgttcaaaaa 40812055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 51206157 - 51206200
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  51206157 tacattgatttcacccaataaaagagtgagtgctagagagagtg 51206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 16178697 - 16178743
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||||||||||||| ||| || | ||||||||||||||    
T  16178697 tacattgatttcatccaataaaagagtgagagttagagagagtgttg 16178743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 39016777 - 39016827
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||| | | ||||||| |||||||||||||||||||||| ||||    
T  39016777 tacattgattttacctaataaaagagtaagtgctagagagagtgttcaaaa 39016827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 44832546 - 44832496
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctaga 61  Q
    ||||||||||||| |||||| |||||| ||||||||||||| |||| ||||    
T  44832546 aaaatggtgggacatacattaatttcacccaataaaaaagtgagtgataga 44832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 52995921 - 52995967
Alignment:
Q  32 atttcatccaataaaa-aagtaagtgctagagagagtgttgaaaaat 77  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||    
T  52995921 atttcatccaataaaaaaagtaagtgttagagaaagtgttgaaaaat 52995967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 4138950 - 4138913
Alignment:
Q  9 aaaaaatggtgggacgtacattgatttcatccaataaa 46  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  4138950 aaaatatggtgggacatacattgatttcatccaataaa 4138913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 24938512 - 24938557
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtg 56  Q
    ||||||||||||| |||||||||| |||||||||||| ||| ||||    
T  24938512 aaaatggtgggacatacattgattacatccaataaaagagtgagtg 24938557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 40977574 - 40977635
Alignment:
Q  9 aaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgtt 70  Q
    |||||||||||| |  |||||| |||||||||||| |||||||||||| ||||  |||||||    
T  40977574 aaaaaatggtggaatatacattaatttcatccaatgaaaaagtaagtgttagaaggagtgtt 40977635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 18421930 - 18421966
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagt 51  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  18421930 tggtgggacatacattgatttcatctaataaaaaagt 18421966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 20225435 - 20225491
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    |||||| ||||||||| | ||| |||| |||||||||||| ||| ||||||||||||    
T  20225435 caaaaagtggtgggacatgcatggattccatccaataaaagagtgagtgctagagag 20225491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 22592383 - 22592323
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||||  ||||| |||||||||||||||| ||| ||||| ||||||| |||| ||||    
T  22592383 tggtgggacaaacatttatttcatccaataaaagagtgagtgccagagagaatgttcaaaa 22592323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 43958234 - 43958170
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| ||||||||||  || |||||||| ||| | ||||||||||| |||| ||||    
T  43958234 aaaatggtgggacatacattgattctattcaataaaagagtgaatgctagagagaatgttaaaaa 43958170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 49682902 - 49682950
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaa 73  Q
    |||||||||||||||| |||||||||| | ||||| ||| |||||||||    
T  49682902 tacattgatttcatccgataaaaaagtgaatgctaaagaaagtgttgaa 49682950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 45554646 - 45554586
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  45554646 tggtgggacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaa 45554586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 9470160 - 9470073
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaata-tgctagtattcctctttta 101  Q
    ||||||||| ||||||||||||||||||||||| ||| |||| ||||||||| |||||||||||| || |||||| ||| ||||||||    
T  9470160 tggtgggacatacattgatttcatccaataaaagagtgagtgttagagagagcgttgaaaaatgagtattgctagcatttctctttta 9470073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 26767862 - 26767922
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  26767862 tggtgggacatacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaa 26767922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 4964774 - 4964826
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagt 67  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  4964774 tggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagt 4964826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 6980235 - 6980287
Alignment:
Q  29 ttgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  6980235 ttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaat 6980287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 28898138 - 28898191
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  28898138 tggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtg 28898191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 42182968 - 42182915
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  42182968 tggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtg 42182915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 38464232 - 38464176
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||    
T  38464232 tacattgatttcatacaataaaaaagtaattgtcagagagagtgttgaaaagtgaat 38464176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 11539489 - 11539438
Alignment:
Q  28 attgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||    
T  11539489 attgatttcatccaataaaagagtgagtgctagaaagagtgttcaaaaatga 11539438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 15509000 - 15508933
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||||||||||| |||||||||||||  |||||||| ||| |||| |||| |||||||| ||||    
T  15509000 caaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaa 15508933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 16719528 - 16719591
Alignment:
Q  12 aaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||||||  ||||||||||||||| ||||||| |||| |||||| ||| |||||||||||    
T  16719528 aaatggtgggatatacattgatttcatctaataaaagagtatgtgctaaagacagtgttgaaaa 16719591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 37652347 - 37652405
Alignment:
Q  16 ggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaa 74  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| | | ||||||||||    
T  37652347 ggtggaacatacattgatttcatctaataaaaaagtaagtgctaaaaaaagtgttgaaa 37652405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 1107117 - 1107064
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| |||  |||||||||||||||    
T  1107117 tggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtg 1107064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 3804659 - 3804603
Alignment:
Q  19 gggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||| ||||||||||||||||||||||| ||| | || || |||||||||||||||    
T  3804659 gggacatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaa 3804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 12989270 - 12989210
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||||||||| ||| ||| ||||  | |||||||||||||||    
T  12989270 tggtgggacatacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaa 12989210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 18511306 - 18511370
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||| ||||||| ||||||||||| ||||||||||| ||| |||| ||| ||||||||| ||||    
T  18511306 aaaatagtgggacatacattgattttatccaataaaagagtgagtgatagtgagagtgttaaaaa 18511370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 37398880 - 37398840
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  37398880 tacatggatttcatccaataaaaaagtaagtgttagagaga 37398840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 43400212 - 43400152
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||| |  ||||||||||||| ||||| |||| ||||||||||||||||||    
T  43400212 tggtgggacatacactagtttcatccaataagaaagtgagtgttagagagagtgttgaaaa 43400152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 43414438 - 43414394
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagt 55  Q
    |||||||| | || |||||||||||||||||||||||||||||||    
T  43414438 aaaatggtagaacatacattgatttcatccaataaaaaagtaagt 43414394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 37228613 - 37228656
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||    
T  37228613 tacattgatttcacccaataaaaaagtgagtgctagaaagagtg 37228656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 37719903 - 37719860
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||    
T  37719903 tacattgatttcatccaataaaagagtgagtgctagaaagagtg 37719860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 2476611 - 2476565
Alignment:
Q  17 gtgggacgtacattgatttcatccaataaaaaagtaagtgctagaga 63  Q
    ||||||| ||||||||||| ||| ||||||| |||||||||||||||    
T  2476611 gtgggacatacattgattttatctaataaaagagtaagtgctagaga 2476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 25666704 - 25666758
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||||||||| |||||| ||| | || | ||||||||||||||||||||    
T  25666704 tacattgatttcatccgataaaagagtgaatgtttgagagagtgttgaaaaatga 25666758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 28898103 - 28898061
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagt 67  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||    
T  28898103 tacattgatttcatccaataaaagagtgagtgctaaagagagt 28898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 30849316 - 30849278
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaa 53  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  30849316 tggtgggacgtacattgatttcatctaataaaaaggtaa 30849278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 32701549 - 32701483
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    ||||||||  ||||||||||| ||||||||||| ||||  ||||| | | |||||||||||||||||    
T  32701549 tggtgggatatacattgattttatccaataaaagagtagttgctaaaaaaagtgttgaaaaatgaat 32701483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 17188133 - 17188092
Alignment:
Q  26 acattgatttcatccaataaaaaagtaagtgctagagagagt 67  Q
    |||||||||||||||||||||| ||| |||| ||||||||||    
T  17188133 acattgatttcatccaataaaatagtgagtgatagagagagt 17188092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10339845 - 10339785
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| | |||||||||   ||||||||| ||| |||||||||||||||||| ||||    
T  10339845 tggtgggacattcattgattttccccaataaaatagtgagtgctagagagagtgttcaaaa 10339785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 10981597 - 10981537
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||  |||||| ||||| |||||| |||| ||||||||||||| ||||    
T  10981597 tggtgggacatacatttttttcattcaatagaaaagtgagtgttagagagagtgttcaaaa 10981537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 11775857 - 11775913
Alignment:
Q  13 aatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    |||||||| || | ||||||||| ||||||||||| | |||||| ||||||||||||    
T  11775857 aatggtggcacattcattgattttatccaataaaacaataagtgttagagagagtgt 11775913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 32072176 - 32072110
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat 81  Q
    ||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  32072176 tggtgggacatacattcatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaat 32072110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 35689559 - 35689506
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  35689559 tggtgggacatacattgatttcatccaataaaaaagtgagtgctagagagagtg 35689506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 8903931 - 8903867
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||||| ||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  8903931 tggtgggacatacattgatttcatcaaataaacaagtgagtactagagagagtgttgaaaaatga 8903867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 9952858 - 9952918
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  9952858 tggtgggacatgcattgatttcatccaataaaaaaatgagtgctagagagagtgttgaaaa 9952918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 28413970 - 28414030
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  28413970 tggtgggacatacattgatttcatcgaataaaaaagtgagcgctagagagagtgttgaaaa 28414030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 17741624 - 17741683
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgtt 70  Q
    ||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||    
T  17741624 aaaatggtgggacatacattgatttcatccaataaacaattacgtgctagagagagtgtt 17741683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13407421 - 13407479
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||    
T  13407421 aaaatggtgggacatacattgattttatccaataaaaaagttagtgttagagagagtgt 13407479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 35151826 - 35151912
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat-atgctagtattcctc 96  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| ||||| | |||||||| |||| ||| |  ||||||||||||||    
T  35151826 aaaatggtgggacatacattgatttcatccaataaaagagtaaatgctaaaaagagtgttaaaaagtgagtgttgctagtattcctc 35151912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 7599533 - 7599584
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaa 76  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  7599533 tacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaa 7599584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 34861288 - 34861372
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga-atatgctagtattcctctttt 100  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||  ||||||||||||||| ||| |  |||||| |||||||||||    
T  34861288 tggtgggacatacattgatttcatccaataaaagagtgagtgct--agagagtgttgaaaagtgagaggtgctagcattcctctttt 34861372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 1977274 - 1977358
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaata-tgctagtattcctctt 98  Q
    |||| |||| |||||||||||||||||| | || ||| |||||||||||||||||| |||| ||| || |||||| |||||||||    
T  1977274 tggttggacatacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctctt 1977358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 17499330 - 17499390
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||| || |||||||||||||||||||| |   |||||||||||||||||||    
T  17499330 aaaatggtgggacatatattgatttcatccaataaaagatagagtgctagagagagtgttg 17499390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 23685210 - 23685156
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||  |||||||||    
T  23685210 tggtgggacatacattgatttcatccaataaaatagtgagtgcttaagagagtgt 23685156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 39023509 - 39023459
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    ||||||||| |||||||||||||||||||||| || | |||||||||||||    
T  39023509 tggtgggacatacattgatttcatccaataaataaatgagtgctagagaga 39023459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 6387644 - 6387591
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||    
T  6387644 aaaatggtgggacatacattgattttatccaataaaagagtgagtgttagagag 6387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 7493463 - 7493508
Alignment:
Q  30 tgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||    
T  7493463 tgatttcatccaataaaaaaataagtgttagagagagtgtttaaaa 7493508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 28211983 - 28212044
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttga 72  Q
    ||||||||| ||| || |||||||||| |||||||| |||| |||||||||||||| |||||    
T  28211983 aaaatggtgagacatatattgatttcacccaataaataagtgagtgctagagagagcgttga 28212044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 10868074 - 10868009
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatg 78  Q
    |||||||||  || |||||||| |||||||||||||||| ||||||  | ||||||||||||||||||    
T  10868074 aaaatggtgaaacatacattgagttcatccaataaaaaaataagtg--atagagagtgttgaaaaatg 10868009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 23142937 - 23142977
Alignment:
Q  28 attgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  23142937 attgatttcacccaataaaaaagtaagtgcttgagagagtg 23142977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 36804936 - 36804996
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||| |||||||||| |||||||||| | ||| |||  ||||||||||||||    
T  36804936 aaaatggtgggacatacattgattccatccaataatatagttagtattagagagagtgttg 36804996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 1961361 - 1961310
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagag 66  Q
    ||||||||||||| ||||||| ||||||||||| | |||||| |||||||||    
T  1961361 tggtgggacgtaccttgattttatccaataaaagattaagtggtagagagag 1961310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 13856506 - 13856553
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttga 72  Q
    ||||||||||||||||||||||| |||  ||| |||||||||||||||    
T  13856506 tacattgatttcatccaataaaagagtgggtgttagagagagtgttga 13856553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5726398 - 5726344
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    ||||||||||||  |||||| ||||||||||||||| || ||| |||||||||||    
T  5726398 aaaatggtgggatatacattaatttcatccaataaataactaaatgctagagaga 5726344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 35689595 - 35689637
Alignment:
Q  26 acattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||    
T  35689595 acattgttttcacccaataaaaaagtgagtgctagagagagtg 35689637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 36629728 - 36629674
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||| |||||||| ||||||| ||||||||||| ||| |||||| ||||||||    
T  36629728 tacatttatttcatctaataaaagagtaagtgctaaagatagtgttcaaaaatga 36629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 45246513 - 45246459
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||| ||| ||||||||||| ||||||||||| ||| ||||||| |||||||||    
T  45246513 tggtgagacatacattgattttatccaataaaatagtgagtgctaaagagagtgt 45246459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 5979959 - 5979899
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||| |||||||||| || |||   | |||||||||||||||||||    
T  5979959 tggtgggacatacattgatctcatccaatagaagagtgtctactagagagagtgttgaaaa 5979899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 34613131 - 34613063
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaa 76  Q
    ||||||||||| || | ||||||| ||||||||||||||||| ||| |  || || |||||||||||||    
T  34613131 caaaaaatggtaggtcctacattggtttcatccaataaaaaaataaatattaaagggagtgttgaaaaa 34613063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 9747 - 9687
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  9747 aaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagagtgttg 9687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 11293 - 11233
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  11293 aaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagagagtgttg 11233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 44272004 - 44271937
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| || |||||||||||||| |||||||| ||||||||||| |||||||||| ||||    
T  44272004 caaaaaatggtggaacatacattgatttcattcaataaaatagtaagtgctaaagagagtgtttaaaa 44271937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 14094102 - 14094162
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||| ||||    
T  14094102 tggtgggacatacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaa 14094162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 18157117 - 18157057
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  18157117 tggtgggacatacattaatttcatccaataaaaaagtgggtgttagagagagtgttgaaaa 18157057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 26980359 - 26980423
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||| ||||||||||||||||||||| | ||| |||  ||||||||||||||||||    
T  26980359 aaaatggtgggacatacattgatttcatccaataatagagtgagtattagagagagtgttgaaaa 26980423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 15523289 - 15523235
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  15523289 tggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 15523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 15531283 - 15531229
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  15531283 tggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 15531229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 19101702 - 19101756
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  19101702 tggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 19101756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 22540447 - 22540393
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  22540447 tggtgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 22540393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 6133724 - 6133785
Alignment:
Q  14 atggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||||||| || ||||||||||||||||||||  || ||||||||||||| |||||||||    
T  6133724 atggtgggacatatattgatttcatccaataaaagggtgagtgctagagagattgttgaaaa 6133785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 11135818 - 11135765
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  11135818 tggtgggacatacattgatttcacccaataaaatagtgagtgctagagagagtg 11135765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 25543419 - 25543334
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatgaat-atgctagtattcctcttt 99  Q
    ||||||||| || |||||||||||| ||||||| |||||||| ||||||||||||| |||| ||| |  |||||| ||||||||||    
T  25543419 tggtgggacatatattgatttcatcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcattcctcttt 25543334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 37553061 - 37553110
Alignment:
Q  26 acattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  37553061 acattaatttcatccaataagaaagtaagtgctagagagagtgttcaaaa 37553110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 28218149 - 28218213
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||| ||| ||||||||||||||||||||||| ||| | ||||| |||||| ||||||||||||    
T  28218149 tggtgagacatacattgatttcatccaataaaagagtgaatgctaaagagagggttgaaaaatga 28218213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 32848684 - 32848744
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||| |||||||| ||||||||| ||| |||||||||||||||||| ||||    
T  32848684 tggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaa 32848744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 13388403 - 13388361
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagt 67  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  13388403 tacattgatttcatccaataaaaaagtgagtgttagagagagt 13388361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 2225303 - 2225254
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||| ||||||||||||||||||||||| |||  |||||||||||    
T  2225303 tggtgggacatacattgatttcatccaataaaagagtgggtgctagagag 2225254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 11430520 - 11430467
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  11430520 tggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtg 11430467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 28109951 - 28109894
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    |||||||||| || | ||||||||||| ||||||||||||| ||||||||||| ||||    
T  28109951 aaaatggtggaacatgcattgatttcacccaataaaaaagtgagtgctagagaaagtg 28109894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 41918074 - 41918025
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||    
T  41918074 tggtgggacatacattgatttcacccaataaaagagtgagtgctagagag 41918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 41958166 - 41958113
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||||||| ||||||||||||||||||||||  ||| |||||| |||||    
T  41958166 aaaatggtgggacatacattgatttcatccaataaatgagtgagtgcttgagag 41958113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 14341022 - 14341082
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| || |||  ||||||||||||||||| | |||| ||||||||||||||||||    
T  14341022 tggtgggacatatattagtttcatccaataaaaaaatgagtgttagagagagtgttgaaaa 14341082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 29673558 - 29673498
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||||||| || |||||||| ||||||||||| | | |||| ||||||||||||||    
T  29673558 aaaatggtgggacatatattgattttatccaataaaataatgagtgttagagagagtgttg 29673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 32211890 - 32211941
Alignment:
Q  20 ggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    |||| ||||||||||||||| ||||||| ||| |||||| ||||||||||||    
T  32211890 ggacatacattgatttcatctaataaaagagtgagtgctggagagagtgttg 32211941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 41095675 - 41095632
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||    
T  41095675 tacattgatttcacccaataaataagtgagtgctagagagagtg 41095632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 11135853 - 11135895
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagt 67  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||    
T  11135853 tacattgatttcacccaataaaagagtgagtgctagagagagt 11135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 39039470 - 39039516
Alignment:
Q  29 ttgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaa 39039516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 41095713 - 41095763
Alignment:
Q  18 tgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    |||||| ||||||||||||| ||||||||  ||| ||||||||||||||||    
T  41095713 tgggacatacattgatttcacccaataaatgagtgagtgctagagagagtg 41095763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 4578678 - 4578727
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    ||||||||| ||||||||||||| ||||||||| ||| |||| |||||||    
T  4578678 tggtgggacctacattgatttcacccaataaaagagtgagtgttagagag 4578727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 21466682 - 21466726
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    |||| |||||||||||||||||| ||| ||||||| |||||||||    
T  21466682 tacactgatttcatccaataaaatagtgagtgctaaagagagtgt 21466726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 24911549 - 24911493
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagag 64  Q
    |||||| ||||||||| ||||| ||||||||| ||||||| | | ||||||||||||    
T  24911549 caaaaagtggtgggacatacatggatttcatcgaataaaagaatgagtgctagagag 24911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 33193133 - 33193093
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagt 51  Q
    |||||||||| || |||||||||||||||||||||| ||||    
T  33193133 aaaatggtggcacatacattgatttcatccaataaataagt 33193093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 36566965 - 36566925
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    ||||||||||||||||||||||| |||||||| || |||||    
T  36566965 tacattgatttcatccaataaaatagtaagtgttaaagaga 36566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 44739197 - 44739137
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||||| ||||||  ||| |||| ||| |||||||||||||||||| ||||    
T  44739197 tggtgggacatacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaa 44739137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 50308844 - 50308884
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagt 51  Q
    ||||||||||||| || |||||||||| |||||||||||||    
T  50308844 aaaatggtgggacatatattgatttcacccaataaaaaagt 50308884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 28490823 - 28490883
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| ||| ||||||||||||||||||||||| | ||||||||||||| |||||||    
T  28490823 tggtgggacatactttgatttcatccaataaaaaagtgaatgctagagagagttttgaaaa 28490883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 17537196 - 17537263
Alignment:
Q  8 caaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||| ||||||||| ||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||    
T  17537196 caaaaattggtgggacatacattgatttgatcaaataaaagagtgagtgatagagagagtgttgaaaa 17537263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 4877850 - 4877898
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgcta 59  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||    
T  4877850 aaaatgatgagacgtacattgatttcatccaataaaaaaataagtgcta 4877898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 10950169 - 10950103
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaat 77  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||||  | ||||||||||| |||||    
T  10950169 aaaatggtgggacatacattgatttcattcaatgaaagagtaagtgagaaagagagtgttggaaaat 10950103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 27592553 - 27592607
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  27592553 tggtgagacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 27592607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 30325975 - 30326029
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgt 69  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||||| |||||||||    
T  30325975 tggtgagacatacattgatttcatccaataaaatagtgagtgctaaagagagtgt 30326029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 10142077 - 10142139
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    ||||||||| ||||||||||| ||||||||||| ||| ||||||  | |||||||||||||||||    
T  10142077 tggtgggacatacattgattttatccaataaaagagtgagtgct--atagagtgttgaaaaatga 10142139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 40971554 - 40971607
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| |||||||||||||  |||||||| ||| ||||||||||||||||    
T  40971554 tggtgggacatacattgatttcactcaataaaagagtgagtgctagagagagtg 40971607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 42224692 - 42224745
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtg 68  Q
    ||||||||| ||||||||||||| | ||||||| ||| ||||||||||||||||    
T  42224692 tggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtg 42224745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 28155795 - 28155847
Alignment:
Q  9 aaaaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctaga 61  Q
    |||||||||| | || |||||||||||||| |||||||| |||||||||||||    
T  28155795 aaaaaatggttgaacatacattgatttcattcaataaaagagtaagtgctaga 28155847  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 32050421 - 32050461
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagaga 65  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  32050421 tacattgatttcacccaataaaaaagtgagtgctagagaga 32050461  T

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Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 37455432 - 37455364
Alignment:
Q  11 aaaatggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||| || ||||||||||| ||| ||||||  |||  ||||||||||||||||| ||||||||    
T  37455432 aaaatggtggaacatacattgattttatcgaataaatgagtgtgtgctagagagagtgttaaaaaatga 37455364  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 1649619 - 1649569
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||||| |||||||||||||| | ||| |||| ||||||||||||||||||    
T  1649619 tacattaatttcatccaataagatagtgagtgttagagagagtgttgaaaa 1649569  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 2525643 - 2525589
Alignment:
Q  25 tacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaaatga 79  Q
    |||||||||||||||||||||||||   |||| || |||||||||| ||||||||    
T  2525643 tacattgatttcatccaataaaaaaacgagtgttaaagagagtgttaaaaaatga 2525589  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 36494303 - 36494242
Alignment:
Q  15 tggtgggacgtacattgatttcatccaa-taaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||| |||||||||| ||||||||||| ||||| |||||||| |||||||| |||| ||||    
T  36494303 tggtgagacgtacattaatttcatccaattaaaagagtaagtgttagagagaatgtttaaaa 36494242  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 5413838 - 5413870
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaa 47  Q
    ||||||||| |||||||||||||||||||||||    
T  5413838 tggtgggacatacattgatttcatccaataaaa 5413870  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 28434917 - 28434973
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttg 71  Q
    ||||||||| || |||||||| ||||||||||| | | |||| ||||||||||||||    
T  28434917 tggtgggacatatattgattttatccaataaaagaattagtgttagagagagtgttg 28434973  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 32309559 - 32309499
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    |||| |||| |||||| |||| ||||||||| | ||| ||||||||||||| |||||||||    
T  32309559 tggtcggacatacattaattttatccaataagagagtgagtgctagagagaatgttgaaaa 32309499  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 296915 - 296855
Alignment:
Q  15 tggtgggacgtacattgatttcatccaataaaaaagtaagtgctagagagagtgttgaaaa 75  Q
    ||||||||| |||| |  ||||||||||||| | ||| |||| ||||||||||||||||||    
T  296915 tggtgggacatacactagtttcatccaataagagagtgagtgttagagagagtgttgaaaa 296855  T

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