View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12062_high_9 (Length: 254)
Name: NF12062_high_9
Description: NF12062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12062_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 13870269 - 13870512
Alignment:
| Q |
1 |
caattcctaattacctccaaaagactattgcacaaaatggtttcccacacaaagagttttcttcgtcaaaccaaagaccaatagcctacttcccagttaa |
100 |
Q |
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| T |
13870269 |
caattcccaattacctccaaaagactattgcacaaaatggtttcccacaca--gagttttcttcgtcaaaccaaagacaaatagcctacttcccagttaa |
13870366 |
T |
|
| Q |
101 |
gttaattgttgcattgaactgattccggccaggaagagcatccttaacggcgagagtgttgtcatccacggtaacctcaacttcctccttcctgacacct |
200 |
Q |
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| T |
13870367 |
gttgattgttccattgaactgattccggccaggaagagcatccttaacggtgagagtgttgtcatccacagtaacctcaacttcctccttcctgacacct |
13870466 |
T |
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| Q |
201 |
ctgaacacatacacactcaaaaacaacagagtccttcttctctctc |
246 |
Q |
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||||||||||||||||||||||||||||||||||| | |||||||| |
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| T |
13870467 |
ctgaacacatacacactcaaaaacaacagagtcctccgtctctctc |
13870512 |
T |
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