View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12066_low_9 (Length: 222)
Name: NF12066_low_9
Description: NF12066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12066_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 27632354 - 27632161
Alignment:
| Q |
14 |
caaaggaaagctctatagacagttgtcccttatcagattggggaatgagaaactcaccttatcatgaaagtagaatatcagattggatagaagaattgca |
113 |
Q |
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| T |
27632354 |
caaaggaaagctctatagacagttgtcccttatcagattggggaatgagaaactcaccttatcatgaaagtagaatatcagattggatagaagaattgca |
27632255 |
T |
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| Q |
114 |
aaatggatttggtgataaggaaaaggaattaggacaagattttaatagtataaatggatcaatatatgattataatccccagcaagaatatgat |
207 |
Q |
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| T |
27632254 |
aaatggatttggtgataaggaaatggaattaggacaagaatttaatagtataaatggatcaatatatgattataatccccagcaagaatatgat |
27632161 |
T |
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